jackhill/guix/guix.git
4 years agognu: Add emacs-fringe-helper.
Brian Leung [Mon, 14 Oct 2019 20:54:53 +0000 (13:54 -0700)]
gnu: Add emacs-fringe-helper.

* gnu/packages/emacs-xyz.scm (emacs-fringe-helper): New variable.

4 years agognu: Add methyldackel.
Ricardo Wurmus [Mon, 14 Oct 2019 20:37:54 +0000 (22:37 +0200)]
gnu: Add methyldackel.

* gnu/packages/bioinformatics.scm (methyldackel): New variable.

4 years agognu: vim-fugitive: Update to 3.1.
Efraim Flashner [Mon, 14 Oct 2019 17:43:49 +0000 (20:43 +0300)]
gnu: vim-fugitive: Update to 3.1.

* gnu/packages/vim.scm (vim-fugitive): Update to 3.1.

4 years agognu: ddcutil: Update to 0.9.7.
Tobias Geerinckx-Rice [Mon, 14 Oct 2019 17:38:32 +0000 (19:38 +0200)]
gnu: ddcutil: Update to 0.9.7.

* gnu/packages/hardware.scm (ddcutil): Update to 0.9.7.

4 years agognu: python-py3status: Update to 3.21.
Tobias Geerinckx-Rice [Mon, 14 Oct 2019 17:32:46 +0000 (19:32 +0200)]
gnu: python-py3status: Update to 3.21.

* gnu/packages/python-xyz.scm (python-py3status): Update to 3.21.

4 years agognu: python-colorspacious: Update to 1.1.2.
Tobias Geerinckx-Rice [Mon, 14 Oct 2019 17:21:47 +0000 (19:21 +0200)]
gnu: python-colorspacious: Update to 1.1.2.

* gnu/packages/python-xyz.scm (python-colorspacious): Update to 1.1.2.

4 years agognu: python-glob2: Update to 0.7.
Tobias Geerinckx-Rice [Mon, 14 Oct 2019 16:10:52 +0000 (18:10 +0200)]
gnu: python-glob2: Update to 0.7.

* gnu/packages/python-xyz.scm (python-glob2): Update to 0.7.

4 years agognu: sqitch: Remove perl-file-homedir input.
Tobias Geerinckx-Rice [Mon, 14 Oct 2019 16:06:28 +0000 (18:06 +0200)]
gnu: sqitch: Remove perl-file-homedir input.

* gnu/packages/databases.scm (perl-file-homedir)[inputs]: Remove perl-file-homedir.

4 years agognu: Add enlightenment-wayland.
Efraim Flashner [Sun, 13 Oct 2019 13:54:22 +0000 (16:54 +0300)]
gnu: Add enlightenment-wayland.

* gnu/packages/enlightenment.scm (enlightenment-wayland): New variable.

4 years agognu: gtkmm: Update to 3.24.1.
Ludovic Courtès [Mon, 14 Oct 2019 16:25:13 +0000 (18:25 +0200)]
gnu: gtkmm: Update to 3.24.1.

* gnu/packages/gtk.scm (gtkmm): Update to 3.24.1.

4 years agognu: gspell: Update to 1.8.2.
Ludovic Courtès [Mon, 14 Oct 2019 16:24:35 +0000 (18:24 +0200)]
gnu: gspell: Update to 1.8.2.

* gnu/packages/gnome.scm (gspell): Update to 1.8.2.

4 years agognu: gfortran: Add version 9.x.
Ludovic Courtès [Mon, 14 Oct 2019 16:04:42 +0000 (18:04 +0200)]
gnu: gfortran: Add version 9.x.

* gnu/packages/gcc.scm (gfortran-9): New variable.

4 years agognu: mumps: Build and install shared libraries.
Maurice Brémond [Mon, 14 Oct 2019 15:44:54 +0000 (17:44 +0200)]
gnu: mumps: Build and install shared libraries.

* gnu/packages/patches/mumps-shared-libseq.patch,
gnu/packages/patches/mumps-shared-mumps.patch,
gnu/packages/patches/mumps-shared-pord.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/maths.scm (mumps)[source](patches): Add them.
[arguments]: In 'configure' phase, adjust "Makefile.inc" for shared
library support.  In 'install' phase, install libmpiseq.so when it
exists.

Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
4 years agognu: mumps: Update to 5.2.1.
Maurice Brémond [Mon, 14 Oct 2019 14:45:53 +0000 (16:45 +0200)]
gnu: mumps: Update to 5.2.1.

* gnu/packages/maths.scm (mumps): Update to 5.2.1.

Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
4 years agognu: Add r-velocyto.
Ricardo Wurmus [Mon, 14 Oct 2019 16:22:46 +0000 (18:22 +0200)]
gnu: Add r-velocyto.

* gnu/packages/bioinformatics.scm (r-velocyto): New variable.

4 years agognu: Add r-phastcons100way-ucsc-hg19.
Ricardo Wurmus [Mon, 14 Oct 2019 15:58:20 +0000 (17:58 +0200)]
gnu: Add r-phastcons100way-ucsc-hg19.

* gnu/packages/bioconductor.scm (r-phastcons100way-ucsc-hg19): New variable.

4 years agognu: Add emacs-sly-package-inferred.
Pierre Neidhardt [Mon, 14 Oct 2019 15:58:07 +0000 (17:58 +0200)]
gnu: Add emacs-sly-package-inferred.

* gnu/packages/emacs-xyz.scm (emacs-sly-package-inferred): New variable.

4 years agognu: Add emacs-sly-macrostep.
Pierre Neidhardt [Mon, 14 Oct 2019 08:02:17 +0000 (10:02 +0200)]
gnu: Add emacs-sly-macrostep.

* gnu/packages/emacs-xyz.scm (emacs-sly-macrostep): New variable.

4 years agognu: Add emacs-sly-named-readtables.
Pierre Neidhardt [Mon, 14 Oct 2019 08:02:11 +0000 (10:02 +0200)]
gnu: Add emacs-sly-named-readtables.

* gnu/packages/emacs-xyz.scm (emacs-sly-named-readtables): New variable.

4 years agognu: emacs-sly-asdf: Update to 20191013.
Pierre Neidhardt [Mon, 14 Oct 2019 07:48:48 +0000 (09:48 +0200)]
gnu: emacs-sly-asdf: Update to 20191013.

* gnu/packages/emacs-xyz.scm (emacs-sly-asdf): Update to 20191013.

4 years agognu: Add emacs-dimmer.
Stephen Webber [Sun, 13 Oct 2019 15:38:52 +0000 (10:38 -0500)]
gnu: Add emacs-dimmer.

    * gnu/packages/emacs-xyz.scm (emacs-dimmer): New variable.

4 years agognu: sudo: Update to 1.8.28 [fixes CVE-2019-14287].
Tobias Geerinckx-Rice [Mon, 14 Oct 2019 15:14:03 +0000 (17:14 +0200)]
gnu: sudo: Update to 1.8.28 [fixes CVE-2019-14287].

* gnu/packages/admin.scm (sudo): Update to 1.8.28.

4 years agognu: r-fields: Use HTTPS home-page.
Tobias Geerinckx-Rice [Mon, 14 Oct 2019 15:06:47 +0000 (17:06 +0200)]
gnu: r-fields: Use HTTPS home-page.

* gnu/packages/cran.scm (r-fields)[home-page]: Use HTTPS.

4 years agognu: r-fields: Update to 9.9.
Tobias Geerinckx-Rice [Mon, 14 Oct 2019 15:06:05 +0000 (17:06 +0200)]
gnu: r-fields: Update to 9.9.

* gnu/packages/cran.scm (r-fields): Update to 9.9.

4 years agognu: sqitch: Update to 1.0.0.
Tobias Geerinckx-Rice [Mon, 14 Oct 2019 14:47:37 +0000 (16:47 +0200)]
gnu: sqitch: Update to 1.0.0.

* gnu/packages/databases.scm (sqitch): Update to 1.0.0.

4 years agognu: network-manager-applet: Update to 1.8.24.
Tobias Geerinckx-Rice [Mon, 14 Oct 2019 14:21:12 +0000 (16:21 +0200)]
gnu: network-manager-applet: Update to 1.8.24.

* gnu/packages/gnome.scm (network-manager-applet): Update to 1.8.24.

4 years agognu: poedit: Update to 2.2.4.
Tobias Geerinckx-Rice [Mon, 14 Oct 2019 14:18:05 +0000 (16:18 +0200)]
gnu: poedit: Update to 2.2.4.

* gnu/packages/poedit.scm (poedit): Update to 2.2.4.

4 years agognu: perl-cache-fastmmap: Update to 1.48.
Tobias Geerinckx-Rice [Mon, 14 Oct 2019 09:14:46 +0000 (11:14 +0200)]
gnu: perl-cache-fastmmap: Update to 1.48.

* gnu/packages/perl.scm (perl-cache-fastmmap): Update to 1.48.

4 years agogexp: Use cross extensions when cross-compiling.
Mathieu Othacehe [Sun, 18 Aug 2019 09:00:23 +0000 (11:00 +0200)]
gexp: Use cross extensions when cross-compiling.

* guix/gexp.scm (load-path-expression): Use ungexp-splicing instead of
ungexp-native-splicing so that the cross extensions are used when target is
set.

4 years agognu: emacs-unpackaged-el: Update to 0-3.746801a.
Brian Leung [Sun, 13 Oct 2019 23:03:02 +0000 (16:03 -0700)]
gnu: emacs-unpackaged-el: Update to 0-3.746801a.

* gnu/packages/emacs-xyz.scm (emacs-unpackaged-el): Update to 0-3.746801a.

4 years agognu: emacs-ivy-rich: Update to 0.1.4-2.7a667b1.
Brian Leung [Sun, 13 Oct 2019 21:24:31 +0000 (14:24 -0700)]
gnu: emacs-ivy-rich: Update to 0.1.4-2.7a667b1.

* gnu/packages/emacs-xyz.scm (emacs-ivy-rich): Update to 0.1.4-2.7a667b1.

4 years agognu: HandBrake: Update to 1.2.2.
Eric Bavier [Mon, 14 Oct 2019 03:54:12 +0000 (22:54 -0500)]
gnu: HandBrake: Update to 1.2.2.

* gnu/packages/video.scm (handbrake): Update to 1.2.2.

4 years agognu: stress-make: Fix build and update.
Eric Bavier [Mon, 14 Oct 2019 03:11:28 +0000 (22:11 -0500)]
gnu: stress-make: Fix build and update.

* gnu/packages/debug.scm (stress-make)[version]: Update to latest upstream
commit.  Bump revision.  Use 'git-version'.
[source]: Update url.  Use 'git-file-name'.
[home-page]: Update url likewise.
[arguments]: Add 'setup-go' phase.
[license]: Update license file name.

4 years agognu: xwd: Fix typo in description.
Tobias Geerinckx-Rice [Sun, 13 Oct 2019 22:40:15 +0000 (00:40 +0200)]
gnu: xwd: Fix typo in description.

* gnu/packages/xorg.scm (xwd)[description]: Fix typo.

4 years agognu: xwininfo: Update to 1.1.5.
Tobias Geerinckx-Rice [Sun, 13 Oct 2019 22:30:10 +0000 (00:30 +0200)]
gnu: xwininfo: Update to 1.1.5.

* gnu/packages/xorg.scm (xwininfo): Update to 1.1.5.

4 years agognu: emacs-nhexl-mode: Use HTTPS home page.
Tobias Geerinckx-Rice [Sun, 13 Oct 2019 13:37:04 +0000 (15:37 +0200)]
gnu: emacs-nhexl-mode: Use HTTPS home page.

* gnu/packages/emacs-xyz.scm (emacs-nhexl-mode)[home-page]: Use HTTPS.

4 years agognu: emacs-nhexl-mode: Update to 1.3.
Tobias Geerinckx-Rice [Sun, 13 Oct 2019 13:36:40 +0000 (15:36 +0200)]
gnu: emacs-nhexl-mode: Update to 1.3.

* gnu/packages/emacs-xyz.scm (emacs-nhexl-mode): Update to 1.3.

4 years agognu: emacs-darkroom: Update to 0.2.
Tobias Geerinckx-Rice [Sun, 13 Oct 2019 13:36:23 +0000 (15:36 +0200)]
gnu: emacs-darkroom: Update to 0.2.

* gnu/packages/emacs-xyz.scm (emacs-darkroom): Update to 0.2.

4 years agognu: emacs-let-alist: Update to 1.0.6.
Tobias Geerinckx-Rice [Sun, 13 Oct 2019 13:36:15 +0000 (15:36 +0200)]
gnu: emacs-let-alist: Update to 1.0.6.

* gnu/packages/emacs-xyz.scm (emacs-let-alist): Update to 1.0.6.

4 years agognu: emacs-csv-mode: Use HTTPS.
Tobias Geerinckx-Rice [Sun, 13 Oct 2019 13:36:04 +0000 (15:36 +0200)]
gnu: emacs-csv-mode: Use HTTPS.

* gnu/packages/emacs-xyz.scm (emacs-csv-mode)[source, home-page]: Use HTTPS.

4 years agognu: emacs-csv-mode: Update to 1.9.
Tobias Geerinckx-Rice [Sun, 13 Oct 2019 13:35:21 +0000 (15:35 +0200)]
gnu: emacs-csv-mode: Update to 1.9.

* gnu/packages/emacs-xyz.scm (emacs-csv-mode): Update to 1.9.

4 years agognu: emacs-load-relative: Update to 1.3.1.
Tobias Geerinckx-Rice [Sun, 13 Oct 2019 13:34:50 +0000 (15:34 +0200)]
gnu: emacs-load-relative: Update to 1.3.1.

* gnu/packages/emacs-xyz.scm (emacs-load-relative): Update to 1.3.1.

4 years agognu: emacs-debbugs: Update to 0.20.
Tobias Geerinckx-Rice [Sun, 13 Oct 2019 13:34:41 +0000 (15:34 +0200)]
gnu: emacs-debbugs: Update to 0.20.

* gnu/packages/emacs-xyz.scm (emacs-debbugs): Update to 0.20.

4 years agognu: starman: Update to 0.4015.
Tobias Geerinckx-Rice [Sun, 13 Oct 2019 12:56:45 +0000 (14:56 +0200)]
gnu: starman: Update to 0.4015.

* gnu/packages/web.scm (starman): Update to 0.4015.

4 years agognu: Add playerctl.
David Wilson [Fri, 11 Oct 2019 05:06:43 +0000 (22:06 -0700)]
gnu: Add playerctl.

* gnu/packages/music.scm (playerctl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
4 years agognu: git-annex: Update to 7.20191009.
Kyle Meyer [Thu, 10 Oct 2019 21:49:25 +0000 (17:49 -0400)]
gnu: git-annex: Update to 7.20191009.

* gnu/packages/haskell-apps.scm (git-annex): Update to 7.20191009.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
4 years agognu: commencement: Use 'package-with-explicit-inputs' for Hurd packages.
Ludovic Courtès [Sun, 13 Oct 2019 21:36:39 +0000 (23:36 +0200)]
gnu: commencement: Use 'package-with-explicit-inputs' for Hurd packages.

* gnu/packages/commencement.scm (with-boot0): New procedure.
(gnumach-headers-boot0, mig-boot0)
(hurd-headers-boot0, hurd-minimal-boot0)
(hurd-core-headers-boot0): Use it instead of 'package-with-explicit-inputs'.

4 years agognu: commencement: Further optimize the package object graph.
Ludovic Courtès [Sun, 13 Oct 2019 21:12:44 +0000 (23:12 +0200)]
gnu: commencement: Further optimize the package object graph.

For a package like:

  (define-public xxx
    (package
      (inherit (@ (gnu packages base) coreutils))
      (name "xxx")
      (inputs (@ (gnu packages commencement) %final-inputs))
      (native-inputs '())
      (propagated-inputs '())
      (arguments '(#:implicit-inputs? #f))))

this reduces the package object graph from 176 nodes (1852 edges) to 113
nodes (1114 edges).

The number of 'add-data-to-store' calls in "guix build coreutils -nd"
drops from 2045 to 1301, and the number of memoization tables drops from
102 to 40.

"guix build libreoffice -nd" goes from 2.40s to 2.27s.

* gnu/packages/commencement.scm (with-boot4): New variable.
(guile-final, glibc-utf8-locales-final): Use it.
(with-boot4, with-boot5): New variable.
(gnu-make-final): Rewrite to avoid 'package-with-explicit-inputs'.
(coreutils-final): Use 'with-boot5' instead of
'package-with-explicit-inputs'.
(grep-final): Likewise.
(with-boot6): New variable.
(sed-final, %final-inputs): Use it.

4 years agobuild-system/gnu: 'package-with-explicit-inputs' uses 'package-mapping'.
Ludovic Courtès [Sun, 13 Oct 2019 21:07:56 +0000 (23:07 +0200)]
build-system/gnu: 'package-with-explicit-inputs' uses 'package-mapping'.

* guix/build-system/gnu.scm (package-with-explicit-inputs): Rename to...
(package-with-explicit-inputs/deprecated): ... this.
(package-with-explicit-inputs*): New procedure.
(package-with-explicit-inputs): Define as a 'case-lambda*'.

4 years agognu: librsvg: Update to 2.46.0.
Marius Bakke [Sun, 13 Oct 2019 19:18:19 +0000 (21:18 +0200)]
gnu: librsvg: Update to 2.46.0.

* gnu/packages/gnome.scm (librsvg-next): Update to 2.46.0.
[arguments]: Patch SHELL in "po/Makefile.in.in".
[native-inputs]: Replace RUST-1.27 with RUST-1.34.

4 years agognu: expat: Replace with 2.2.9 [fixes CVE-2019-15903].
Marius Bakke [Sun, 13 Oct 2019 19:06:53 +0000 (21:06 +0200)]
gnu: expat: Replace with 2.2.9 [fixes CVE-2019-15903].

* gnu/packages/xml.scm (expat-2.2.9): New variable.
(expat)[replacement]: New field.

4 years agognu: libgcrypt: Replace with 1.8.5 [fixes CVE-2019-13627].
Marius Bakke [Sun, 13 Oct 2019 19:02:08 +0000 (21:02 +0200)]
gnu: libgcrypt: Replace with 1.8.5 [fixes CVE-2019-13627].

* gnu/packages/gnupg.scm (libgcrypt-1.8.5): New variable.
(libgcrypt)[replacement]: New field.

4 years agognu: curl: Replace with 7.66.0 [fixes CVE-2019-5481, CVE-2019-5482].
Marius Bakke [Sun, 13 Oct 2019 18:51:17 +0000 (20:51 +0200)]
gnu: curl: Replace with 7.66.0 [fixes CVE-2019-5481, CVE-2019-5482].

* gnu/packages/curl.scm (curl-7.66.0): New variable.
(curl)[replacement]: New field.

4 years agognu: nghttp2: Replace with 1.39.2 [fixes CVE-2019-9511, CVE-2019-9513].
Marius Bakke [Sun, 13 Oct 2019 18:50:47 +0000 (20:50 +0200)]
gnu: nghttp2: Replace with 1.39.2 [fixes CVE-2019-9511, CVE-2019-9513].

* gnu/packages/web.scm (nghttp2-1.39.2): New variable.
(nghttp2)[replacement]: New field.

4 years agognu: OpenSSL@1.0: Replace with 1.0.2t [fixes CVE-2019-1547, CVE-2019-1563].
Marius Bakke [Sun, 13 Oct 2019 18:50:18 +0000 (20:50 +0200)]
gnu: OpenSSL@1.0: Replace with 1.0.2t [fixes CVE-2019-1547, CVE-2019-1563].

* gnu/packages/tls.scm (openssl-1.0.2t): New variable.
(openssl-1.0)[replacement]: New field.

4 years agognu: Add emacs-forge.
Oleg Pykhalov [Sat, 10 Aug 2019 16:17:12 +0000 (19:17 +0300)]
gnu: Add emacs-forge.

* gnu/packages/emacs-xyz.scm (emacs-forge): New variable.

4 years agognu: emacs-closql: Update to 1.0.0-1.70b98db.
Oleg Pykhalov [Sat, 5 Oct 2019 17:42:48 +0000 (20:42 +0300)]
gnu: emacs-closql: Update to 1.0.0-1.70b98db.

* gnu/packages/emacs-xyz.scm (emacs-closql): Update to 1.0.0-1.70b98db.

4 years agognu: emacs-ghub: Update to 3.2.0-1.cf0b13a.
Brian Leung [Wed, 14 Aug 2019 06:04:20 +0000 (08:04 +0200)]
gnu: emacs-ghub: Update to 3.2.0-1.cf0b13a.

* gnu/packages/emacs-xyz.scm (emacs-ghub): Update to 3.2.0-1.cf0b13a.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
4 years agognu: emacs-magit: Update to 2.90.1-2.c761d28.
Oleg Pykhalov [Wed, 14 Aug 2019 20:12:48 +0000 (23:12 +0300)]
gnu: emacs-magit: Update to 2.90.1-2.c761d28.

* gnu/packages/emacs-xyz.scm (emacs-magit): Update to 2.90.1-2.c761d28.
[arguments]: Add patch phase.

4 years agognu: ao: Update to 1.2.2-5-g20dc8ed [fixes CVE-2017-11548].
Marius Bakke [Sun, 13 Oct 2019 16:00:11 +0000 (18:00 +0200)]
gnu: ao: Update to 1.2.2-5-g20dc8ed [fixes CVE-2017-11548].

* gnu/packages/xiph.scm (ao): Update to 1.2.2-5-g20dc8ed.
[source]: Switch to GIT-FETCH.
[native-inputs]: Add AUTOCONF, AUTOMAKE and LIBTOOL.

4 years agognu: ao: Specify CPE name.
Marius Bakke [Sun, 13 Oct 2019 15:53:51 +0000 (17:53 +0200)]
gnu: ao: Specify CPE name.

* gnu/packages/xiph.scm (ao)[properties]: New field.

4 years agognu: tcl: Update home page.
Marius Bakke [Sun, 13 Oct 2019 15:41:58 +0000 (17:41 +0200)]
gnu: tcl: Update home page.

* gnu/packages/tcl.scm (tcl)[home-page]: Use HTTPS.

4 years agognu: util-linux: Adjust indentation.
Marius Bakke [Sun, 13 Oct 2019 15:23:28 +0000 (17:23 +0200)]
gnu: util-linux: Adjust indentation.

* gnu/packages/linux.scm (util-linux): Re-indent.

4 years agognu: Add pragha.
Eric Bavier [Tue, 8 Oct 2019 04:29:07 +0000 (23:29 -0500)]
gnu: Add pragha.

* gnu/packages/music.scm (pragha): New variable.

4 years agognu: easytag: Fix mp3 support.
Pierre Langlois [Sat, 12 Oct 2019 21:30:08 +0000 (22:30 +0100)]
gnu: easytag: Fix mp3 support.

* gnu/packages/music.scm (easytag)[arguments]: Add 'Name', 'Description' and
'Version' entries to temporary id3tag.pc pkg-config file.  Terminate phases
with #t.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
4 years agognu: id3lib: Apply patch for UTF16 writing bug.
Pierre Langlois [Sat, 12 Oct 2019 21:29:18 +0000 (22:29 +0100)]
gnu: id3lib: Apply patch for UTF16 writing bug.

* gnu/packages/patches/id3lib-UTF16-writing-bug.patch: New file.
* gnu/packages/mp3.scm (id3lib)[source](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
4 years agognu: parted: End phases on #t.
Marius Bakke [Sun, 13 Oct 2019 10:49:15 +0000 (12:49 +0200)]
gnu: parted: End phases on #t.

* gnu/packages/disk.scm (parted)[arguments]: End phase on #t and reindent.

4 years agognu: parted: Complete the 3.3 update.
Marius Bakke [Sun, 13 Oct 2019 10:48:26 +0000 (12:48 +0200)]
gnu: parted: Complete the 3.3 update.

Fixes <https://bugs.gnu.org/37721>.
Reported by Jesse Gibbons <jgibbons2357@gmail.com>.

This is a follow-up to commit 6ad7e3578b6ec924ceddabc908decdab8e453eca.

* gnu/packages/patches/parted-glibc-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/disk.scm (parted)[source](patches): Remove.
[native-inputs]: Add E2FSPROGS.

4 years agognu: Add emacs-sly-asdf.
Pierre Neidhardt [Sat, 12 Oct 2019 19:01:14 +0000 (21:01 +0200)]
gnu: Add emacs-sly-asdf.

* gnu/packages/emacs-xyz.scm (emacs-sly-asdf): New variable.

4 years agognu: Add emacs-sly-quicklisp.
Pierre Neidhardt [Sat, 12 Oct 2019 17:56:45 +0000 (19:56 +0200)]
gnu: Add emacs-sly-quicklisp.

* gnu/packages/emacs-xyz.scm (emacs-sly-quicklisp): New variable.

4 years agognu: emacs-sly: Update to 20191003.
Pierre Neidhardt [Sat, 12 Oct 2019 16:32:07 +0000 (18:32 +0200)]
gnu: emacs-sly: Update to 20191003.

* gnu/packages/emacs-xyz.scm (emacs-sly): Update to 20191003.
[native-inputs]: Add texinfo to build doc.
[arguments]: Include "contrib" and "slink" folders so that SLY can start.
Add "install-doc" phase.

4 years agognu: shotwell: Don't use NAME in source URI.
Tobias Geerinckx-Rice [Sat, 12 Oct 2019 20:15:41 +0000 (22:15 +0200)]
gnu: shotwell: Don't use NAME in source URI.

* gnu/packages/gnome.scm (shotwell)[source]: Hard-code NAME.

4 years agognu: shotwell: Update to 0.30.7.
Tobias Geerinckx-Rice [Sat, 12 Oct 2019 20:15:37 +0000 (22:15 +0200)]
gnu: shotwell: Update to 0.30.7.

* gnu/packages/gnome.scm (shotwell): Update to 0.30.7.

4 years agognu: eog-plugins: Update to 3.26.4.
Tobias Geerinckx-Rice [Sat, 12 Oct 2019 17:16:32 +0000 (19:16 +0200)]
gnu: eog-plugins: Update to 3.26.4.

* gnu/packages/gnome.scm (eog-plugins): Update to 3.26.4.

4 years agognu: parted: Update to 3.3.
Tobias Geerinckx-Rice [Sat, 12 Oct 2019 15:54:26 +0000 (17:54 +0200)]
gnu: parted: Update to 3.3.

* gnu/packages/disk.scm (parted): Update to 3.3.

4 years agognu: e2fsprogs: Update to 1.45.4 [fixes CVE-2019-5094].
Marius Bakke [Sat, 12 Oct 2019 19:44:26 +0000 (21:44 +0200)]
gnu: e2fsprogs: Update to 1.45.4 [fixes CVE-2019-5094].

* gnu/packages/linux.scm (e2fsprogs): Update to 1.45.4.

4 years agognu: efl: Update to 1.23.1.
Efraim Flashner [Sat, 12 Oct 2019 17:57:15 +0000 (20:57 +0300)]
gnu: efl: Update to 1.23.1.

* gnu/packages/enlightenment.scm (efl): Update to 1.23.1.

4 years agognu: python-jupyter-kernel-test: Use PYTHON-VERSION.
Marius Bakke [Sat, 12 Oct 2019 16:37:29 +0000 (18:37 +0200)]
gnu: python-jupyter-kernel-test: Use PYTHON-VERSION.

* gnu/packages/jupyter.scm (python-jupyter-kernel-test)[arguments]: Use
PYTHON-VERSION to determite Python version.

4 years agognu: json-modern-cxx: Update to 3.7.0.
Marius Bakke [Sat, 12 Oct 2019 14:49:41 +0000 (16:49 +0200)]
gnu: json-modern-cxx: Update to 3.7.0.

* gnu/packages/cpp.scm (json-modern-cxx): Update to 3.7.0.
[source](snippet): Adjust for new doctest requirement.
[native-inputs]: Add DOCTEST.
[inputs]: Remove CATCH-FRAMEWORK2.

4 years agognu: Add doctest.
Marius Bakke [Sat, 12 Oct 2019 14:10:28 +0000 (16:10 +0200)]
gnu: Add doctest.

* gnu/packages/check.scm (doctest): New public variable.

4 years agognu: twolame: Update to 0.4.0.
Marius Bakke [Sat, 12 Oct 2019 13:44:03 +0000 (15:44 +0200)]
gnu: twolame: Update to 0.4.0.

* gnu/packages/audio.scm (twolame): Update to 0.4.0.
[source](snippet): Remove.

4 years agognu: kodi: Update to 18.4.
Marius Bakke [Sat, 12 Oct 2019 13:39:37 +0000 (15:39 +0200)]
gnu: kodi: Update to 18.4.

* gnu/packages/kodi.scm (kodi): Update to 18.4.

4 years agognu: python-django: Update to 1.11.25 [security fixes].
Marius Bakke [Sat, 12 Oct 2019 13:39:10 +0000 (15:39 +0200)]
gnu: python-django: Update to 1.11.25 [security fixes].

* gnu/packages/django.scm (python-django): Update to 1.11.25.

4 years agognu: gRPC: Update description.
Marius Bakke [Sat, 12 Oct 2019 12:56:30 +0000 (14:56 +0200)]
gnu: gRPC: Update description.

* gnu/packages/machine-learning.scm (grpc)[description]: Remove "open source".

4 years agognu: FANN: Update description.
Marius Bakke [Sat, 12 Oct 2019 12:55:29 +0000 (14:55 +0200)]
gnu: FANN: Update description.

* gnu/packages/machine-learning.scm (fann)[description]: Remove "open source".

4 years agognu: arx-libertatis: Update description.
Marius Bakke [Sat, 12 Oct 2019 12:54:21 +0000 (14:54 +0200)]
gnu: arx-libertatis: Update description.

* gnu/packages/games.scm (arx-libertatis)[description]: Remove "open source".

4 years agognu: BOINC: Add a source file name.
Marius Bakke [Sat, 12 Oct 2019 12:52:33 +0000 (14:52 +0200)]
gnu: BOINC: Add a source file name.

While at it, future-proof the URL as well.

* gnu/packages/distributed.scm (boinc-client)[source](file-name): New field.

4 years agognu: BOINC: Update license.
Marius Bakke [Sat, 12 Oct 2019 12:50:29 +0000 (14:50 +0200)]
gnu: BOINC: Update license.

* gnu/packages/distributed.scm (boinc-client)[license]: Add LGPL3+.

4 years agognu: BOINC: Remove redundant comment.
Marius Bakke [Sat, 12 Oct 2019 12:46:09 +0000 (14:46 +0200)]
gnu: BOINC: Remove redundant comment.

* gnu/packages/distributed.scm (boinc-client)[description]: Don't mention
license terms.

4 years agognu: emacs: Add mailutils to inputs.
wednesday [Tue, 30 Apr 2019 21:43:45 +0000 (22:43 +0100)]
gnu: emacs: Add mailutils to inputs.

* gnu/packages/emacs.scm (emacs)[inputs]: Add mailutils.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
4 years agognu: mailutils: Update to 3.7.
Tobias Geerinckx-Rice [Sat, 12 Oct 2019 14:04:30 +0000 (16:04 +0200)]
gnu: mailutils: Update to 3.7.

* gnu/packages/mail.scm (mailutils): Update to 3.7.

4 years agognu: amtk: Don't use NAME in source URI.
Tobias Geerinckx-Rice [Sat, 12 Oct 2019 13:41:58 +0000 (15:41 +0200)]
gnu: amtk: Don't use NAME in source URI.

* gnu/packages/gnome.scm (amtk)[source]: Hard-code NAME.

4 years agognu: amtk: Update to 5.0.1.
Tobias Geerinckx-Rice [Sat, 12 Oct 2019 13:41:52 +0000 (15:41 +0200)]
gnu: amtk: Update to 5.0.1.

* gnu/packages/gnome.scm (amtk): Update to 5.0.1.

4 years agognu: lightning: Update to 2.1.3.
Tobias Geerinckx-Rice [Sat, 12 Oct 2019 13:22:12 +0000 (15:22 +0200)]
gnu: lightning: Update to 2.1.3.

* gnu/packages/assembly.scm (lightning): Update to 2.1.3.

4 years agognu: Add uchardet.
Reza Alizadeh Majd [Fri, 11 Oct 2019 19:53:21 +0000 (23:23 +0330)]
gnu: Add uchardet.

* gnu/packages/freedesktop.scm (uchardet): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
4 years agognu: re2c: Update to 1.2.1.
Sergei Trofimovich [Sat, 12 Oct 2019 12:16:48 +0000 (13:16 +0100)]
gnu: re2c: Update to 1.2.1.

* gnu/packages/re2c.scm (re2c): Update to 1.2.1.

Signed-off-by: Sergei Trofimovich <slyfox@inbox.ru>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
4 years agognu: ld-wrapper: Memoize.
Ludovic Courtès [Sat, 12 Oct 2019 13:01:50 +0000 (15:01 +0200)]
gnu: ld-wrapper: Memoize.

The command:

  guix graph -e '(@@ (gnu packages commencement) coreutils-final)'

now shows 93 nodes (992 edges) instead of 176 nodes (1241 edges).

* gnu/packages/commencement.scm (ld-wrapper-boot0): Use 'mlambda'
instead of 'lambda'.
(ld-wrapper-boot3): Likewise.

4 years agognu: Improve memoization of 'package-with-bootstrap-guile'.
Ludovic Courtès [Sat, 12 Oct 2019 12:42:36 +0000 (14:42 +0200)]
gnu: Improve memoization of 'package-with-bootstrap-guile'.

Before that, the command:

  GUIX_PROFILING=memoization guix build -e '(@@ (gnu packages commencement) gnu-make-final)' -nd

would show that 'package-with-bootstrap-guile' was called 2256
times (hit rate: 89%).  Now, it is called 745 times (hit rate: 85%).

"guix build libreoffice -nd" goes from 2.60s to 2.40s (-8%).

* gnu/packages/commencement.scm (gnu-make-final)
(coreutils-final, grep-final, sed-final, %final-inputs): Call
'package-with-bootstrap-guile' before 'package-with-explicit-inputs'.

4 years agognu: python-scikit-learn: Update to 0.20.4.
Jesse Gibbons [Fri, 11 Oct 2019 19:16:35 +0000 (13:16 -0600)]
gnu: python-scikit-learn: Update to 0.20.4.

Fixes <https://bugs.gnu.org/37705>.

* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.20.4.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
4 years agognu: mescc-tools: Use 'git-fetch'.
Ludovic Courtès [Sat, 12 Oct 2019 10:22:18 +0000 (12:22 +0200)]
gnu: mescc-tools: Use 'git-fetch'.

* gnu/packages/mes.scm (mescc-tools-0.5.2)[source]: Use 'git-fetch'.
(mescc-tools)[source]: Likewise.