gnu: Add bshapr.

* gnu/packages/music.scm (bshapr): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add ninjas2.

* gnu/packages/music.scm (ninjas2): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: carla: Add gtk2 dependency.

* gnu/packages/audio.scm (carla)[inputs]: Add gtk2 to allow bridging
  gtk2 plugins in gtk3 hosts.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: carla: Update to 2.1.1.

* gnu/packages/audio.scm (carla): Update to 2.1.1.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu-maintenance: Recognize "RC" as denoting a pre-release tarball.

* guix/gnu-maintenance.scm (%alpha-tarball-rx): Add "RC".

gnu-maintenance: Handle lists returned by 'origin-uri'.

This fixes "guix refresh man-pages", for instance.

* guix/gnu-maintenance.scm (latest-savannah-release)
(latest-kernel.org-release): Handle the case where 'origin-uri' returns
a list.

gnu-maintenance: Call 'adjusted-upstream-source' only when there's a source.

This is a followup to 59a47fb67853dd28891376fc970699f11c0f972f.

* guix/gnu-maintenance.scm (latest-savannah-release): Call
'adjusted-upstream-source' only when 'latest-html-release' returns
true.
(latest-kernel.org-release): Likewise.

gnu: python-aionotify: Fix test cases with Python 3.8.

* gnu/packages/python-xyz.scm (patches): Add fix.
* gnu/packages/patches/python-aionotify-0.2.0-py3.8.patch: New file.
* gnu/local.mk: Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

json: Re-export 'define-json-mapping' from (json) when available.

This prepares for the migration to Guile-JSON 4.3.0.

* guix/json.scm (define-as-needed): New macro.
(define-json-mapping): Use 'define-as-needed' instead of
'define-syntax-rule'.

gnu-maintenance: '' and 'savannah' updaters rewrite URLs.

This makes sure they return 'mirror://' URLs rather that URLs pointing
to the specific mirror they talk to.

* guix/gnu-maintenance.scm (url-prefix-rewrite)
(adjusted-upstream-source): New procedures.
(latest-savannah-release, latest-kernel.org-release): Use it.

upstream: Use 'warning' instead of 'format'.

* guix/upstream.scm (update-package-source): Use 'warning' instead of 'format'.

download: Add Savannah mirror.

* guix/download.scm (%mirrors): Add nongnu.freemirror.org.

gnu-maintenance: Add 'savannah' updater.

* guix/gnu-maintenance.scm (savannah-package?, %savannah-base)
(%savannah-updater): New variables.
(latest-savannah-release): New procedure.
(latest-xorg-release): Fix docstring.

gnu-maintenance: 'latest-html-release' honors #:file->signature.

* guix/gnu-maintenance.scm (latest-html-release): Call FILE->SIGNATURE
instead of the in-line ".tar.sign" policy.

pack: Build the store database under a UTF-8 locale.

Fixes <https://bugs.gnu.org/42389>.
Reported by branjam4@gmail.com.

* guix/scripts/pack.scm (store-database)[build]: Add calls to 'setenv'
and 'setlocale'.
* tests/pack.scm ("self-contained-tarball + localstatedir, UTF-8 file
names"): New test.

pack: 'self-contained-tarball' runs derivation in a UTF-8local.

* guix/scripts/pack.scm (self-contained-tarball)
[set-utf8-locale]: New variable.
[build]: Use it.
* tests/pack.scm ("self-contained-tarball"): Use a <profile> record
instead of 'profile-derivation'.

ssh: Speed up RPCs by using #:nodelay.

Partly fixes <https://bugs.gnu.org/41702>.

* guix/ssh.scm (open-ssh-session): Enable #:nodelay.
* m4/guix.m4 (GUIX_CHECK_GUILE_SSH): Add feature check for this new parameter.
* doc/guix.texi (Requirements): Adjust.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>

gnu: guile-ssh: Update to 0.13.0.

* gnu/packages/ssh.scm (guile-ssh): Update to 0.13.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: python-zope-security: Update to 5.1.1.

* gnu/packages/python-web.scm (python-zope-security): Update to 5.1.1.
[arguments]: Don't skip tests.
[native-inputs]: Add python-btrees, python-zope-component-bootstrap,
python-zope-location-bootstrap. Replace python-zope-configuration with
python-zope-configuration-bootstrap.

gnu: Adsd python-transaction.

* gnu/packages/python-web.scm (python-transaction): New variable.

gnu: Add python-zope-location-bootstrap.

* gnu/packages/python-web.scm (python-zope-location-bootstrap): New
hidden package.

gnu: Add python-zope-configuration-bootstrap.

* gnu/packages/python-web.scm (python-zope-configuration-bootstrap): New
hidden variable.

gnu: Add python-zope-component-bootstrap.

* gnu/packages/python-web.scm (python-zope-component-bootstrap): New
hidden variable.

gnu: Add python-btrees.

* gnu/packages/python-web.scm (python-btrees): New variable.

gnu: Add python-persistent.

* gnu/packages/python-web.scm (python-persistent): New variable.

gnu: python-zope-configuration: Update to 4.4.0.

* gnu/packages/python-web.scm (python-zope-configuration): Update to
4.4.0.
[arguments]: Don't skip tests.
[native-inputs]: Add python-manuel.

gnu: Add python-manuel.

* gnu/packages/python-web.scm (python-manuel): New variable.

gnu: python-zope-schema: Update to 6.0.0.

* gnu/packages/python-web.scm (python-zope-schema): Update to 6.0.0.
[arguments]: Don't skip tests. Use custom 'check phase.

gnu: python-zope-interface: Update to 5.1.0.

* gnu/packages/python-web.scm (python-zope-interface): Update to 5.1.0.
[arguments]: Skip tests.
[native-inputs]: Add python-coverage, python-nose, python-zope-testing.

gnu: python-zope-proxy: Update to 4.3.5.

* gnu/packages/python-web.scm (python-zope-proxy): Update to 4.3.5.

gnu: python-zope-proxy: Run the tests.

* gnu/packages/python-web.scm (python-zope-proxy)[arguments]: Don't skip
tests.
[native-inputs]: Add python-zope-security-bootstrap.

gnu: Add python-zope-security-bootstrap.

* gnu/packages/python-web.scm (python-zope-security-bootstrap): New
hidden package.

gnu: Add python-zope-proxy-bootstrap.

* gnu/packages/python-web.scm (python-zope-proxy-bootstrap): New hidden
package.

gnu: python-zope-exceptions: Enable tests.

* gnu/packages/python-web.scm (python-zope-exceptions)[arguments]: Use
custom 'check phase.
[native-inputs]: Add python-zope-testrunner-bootstrap.

gnu: Add python-zope-testrunner-bootstrap.

* gnu/packages/python-web.scm (python-zope-testrunner-bootstrap): New
hidden package.

gnu: Add python-zope-exceptions-bootstrap.

* gnu/packages/python-web.scm (python-zope-exceptions-bootstrap): New
hidden package.

gnu: python-zope-exceptions: Update to 4.4.

* gnu/packages/python-web.scm (python-zope-exceptions): Update to 4.4.

gnu: python-zope-testrunner: Update to 5.2.

* gnu/packages/python-web.scm (python-zope-testrunner): Update to 5.2.

gnu: Add python-py3dns.

* gnu/packages/python-xyz.scm (python-py3dns): New variable.

gnu: python-click: Update to 7.1.2.

* gnu/packages/python-xyz.scm (python-click): Update to 7.1.2.
[arguments] Fix the name of the file to modify. Set PYTHONPATH to make tests pass.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: rust-parking-lot-0.10: Upgrade to 0.10.2.

* gnu/packages/crates-io.scm (rust-parking-lot-core-0.10): Upgrade to 0.10.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: rust-parking-lot-core-0.7: Update to 0.7.2.

* gnu/packages/crates-io.scm (rust-parking-lot-core-0.7): Update to 0.7.2.
[arguments]: In cargo-inputs replace rust-petgraph-0.4 with 0.5.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: Add rust-petgraph-0.5.

* gnu/packages/crates-io.scm (rust-petgraph-0.5): New variable.
(rust-petgraph-0.4): Inherit from rust-petgraph-0.5.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: Add rust-fixedbitset-0.2.

* gnu/packages/crates-io.scm (rust-fixedbitset-0.2): New variable.
(rust-fixedbitset-0.1): Inherit from rust-fixedbitset-0.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: rust-fixedbitset-0.1: Do not skip build.

* gnu/packages/crates-io.scm (rust-fixedbitset-0.1): [arguments] Do not skip
build.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: rust-petgraph-0.4: Do not skip build.

* gnu/packages/crates-io.scm (rust-petgraph-0.4): [arguments] Correct
dependencies, ignore failing test, do not skip build.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: Add rust-odds-0.2.

* gnu/packages/crates-io.scm (rust-odds-0.2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: rust-odds-0.3: Do not skip build.

* gnu/packages/crates-io.scm (rust-odds-0.3): Do not skip build.
[arguments]: In cargo-development-inputs replace rust-itertools-0.8 with
0.7, rust-lazy-static-1 with 0.2, rust-quickcheck-0.8 with 0.4.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: Add rust-itertools-0.5.

* gnu/packages/crates-io.scm (rust-itertools-0.5): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: rust-lock-api-0.3: Update to 0.3.4.

* gnu/packages/crates-io.scm (rust-lock-api-0.3): Update to 0.3.4.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: python-pytest-vcr: Fix integration with pytest-5.

* gnu/packages/python-check.scm (python-pytest-vcr): Update to 1.0.2-1.4d6c7b3.

gnu: java-cisd-jhdf5: Update location of commons-io jar.

* gnu/packages/java.scm (java-cisd-jhdf5)[arguments]: Update location of
commons-io jar.

gnu: java-cisd-base: Update location of commons-io jar.

* gnu/packages/java.scm (java-cisd-base)[arguments]: Update location of
commons-io jar.

gnu: widelands: Update to 21.

* gnu/packages/games.scm (widelands): Update to 21.
[arguments]: Remove unneeded 'install-desktop-file-and-icons phase.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: Add rust-directories-3.

* gnu/packages/crates-io.scm (rust-directories-3): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: gnunet: Enable more tests.

* gnu/packages/gnunet.scm (gnunet)[arguments]: Enable cadet tests.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: emacs-telega: Update to 0.6.27-1.

* gnu/packages/emacs-xyz.scm (emacs-telega): Update to 0.6.27-1.

[source]: Take a new commit that includes the latest .el files from the
contrib subdirectory.

[arguments]: Add a substitute method for the 'telega-install-contrib phase to
know where telega-contrib is located, and use it appropriately.

[arguments]: Manually invoke bytecompilation as a separate step for the
contrib directory.

[arguments]: Add 'telega-install-contrib phase to place the contrib directory
files in a more guix-suitable place.

gnu: MPD: Update to 0.21.25.

* gnu/packages/mpd.scm (mpd): Update to 0.21.25.

gnu: libmpdclient: Update to 2.19.

* gnu/packages/mpd.scm (libmpdclient): Update to 2.19.

gnu: lean: Disable test cases for i686 and armhf.

* gnu/packages/lean.scm (lean)[arguments]: Individual test cases are currently
failing for 32-bit architectures. Disable them temporarily pending further
investigation as to resolution.

gnu: console-setup: Update to 1.196.

* gnu/packages/xorg.scm (console-setup): Update to 1.196.
[source]: Use git tag.

gnu: xev: Update to 1.2.4.

* gnu/packages/xorg.scm (xev): Update to 1.2.4.

gnu: qutebrowser: Update to 1.13.1.

* gnu/packages/web-browsers.scm (qutebrowser): Update to 1.13.1.

gnu: python-pendulum: Update to 2.1.1.

* gnu/packages/time.scm (python-pendulum): Update to 2.1.1.

gnu: zabbix-agentd, zabbix-server: Update to 5.0.2 [fixes CVE-2020-15803].

* gnu/packages/monitoring.scm (zabbix-agentd): Update to 5.0.2.

gnu: mc: Update to 4.8.25.

* gnu/packages/mc.scm (mc): Update to 4.8.25.

gnu: mtd-utils: Update to 2.1.2.

* gnu/packages/linux.scm (mtd-utils): Update to 2.1.2.

gnu: libtorrent-rasterbar: Update to 1.2.7.

* gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.2.7.

[source]: Modify the URL.

gnu: Add gdc-toolchain.

* gnu/packages/commencement.scm(gdc-toolchain): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: Add gdc-10.

* gnu/packages/gcc.scm (gdc-10): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

gnu: python-fasteners: Update to 0.15.

* gnu/packages/python-xyz.scm (python-fasteners): Update to 0.15.
[propagated-inputs]: Move python-testtools ...
[native-inputs]: ... to here.

gnu: stress-make: Fix build with make 4.3.

* gnu/packages/debug.scm (stress-make): Update to latest upstream commit.
[arguments]: Adjust source file name for substitute*.

gnu: r-rhdf5lib: Fix libsz substitution.

This is a follow-up to commit b7f051db14fb485fcfa4917924eef186fb1b8c07 -
in the new version, some of the format strings being replaced gained
quotes. This commit fixes build of dependents of r-rhdf5lib, such as
r-hdf5array.

* gnu/packages/bioinformatics (r-rhdf5lib): Remove all instances of libsz.a.

gnu: perl-gd: Update to 2.72 [fixes CVE-2019-6977].

* gnu/packages/gd.scm (perl-gd): Update to 2.72.

gnu: s-tui: Update to 1.0.2.

* gnu/packages/admin.scm (s-tui): Update to 1.0.2.

doc: Fix Ganeti blog post URL.

* doc/guix.texi (Virtualization Services): Adjust Ganeti blog post URL.

services: ganeti: Use TLS on the remote API by default.

* gnu/services/ganeti.scm (<ganeti-rapi-configuration>): Set SSL? to #t.
* gnu/tests/ganeti.scm (%ganeti-os): Set SSL? to #f.
* doc/guix.texi (Virtualization Services): Adjust accordingly.

gnu: ungoogled-chromium: Update to 84.0.4147.89-0.df199c0.

* gnu/packages/patches/ungoogled-chromium-system-jsoncpp.patch,
gnu/packages/patches/ungoogled-chromium-system-zlib.patch: Delete files.
* gnu/packages/patches/ungoogled-chromium-system-nspr.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 84.
(%ungoogled-revision): Set to df199c04ff367da59ce52a23a3f3b305dd3b00c3.
(%debian-revision): Set to debian/83.0.4103.116-3.
(%gentoo-revision): Set to f3f649046d31ebdbc8c4a302b2384504eff78027.
(chromium-gcc-patchset, %chromium-gcc-patches): New variables.
(%gentoo-patches): Remove GCC patches, which have been moved to the above
repo.  Add ffmpeg compatibility patch.
(%debian-patches): Add zlib and jsoncpp patch; remove nspr patch.
(%ungoogled-origin): Update hash.
(ungoogled-chromium-snippet): Add the new GCC patches.  Remove obsolete local
patches, add new.
(xcb-proto/python2): New variable.
(ungoogled-chromium): Update to 84.0.4147.89-0..df199c0.
[arguments]: Add "is_unsafe_developer_build", "max_jobs_per_link",
"exclude_unwind_tables", "xcbproto_path", "perfetto_use_system_protobuf" to
 #:configure-flags.  Remove "linux_use_bundled_binutils".  Adjust vulkan
header substitutions.
[native-inputs]: Remove YASM.
[inputs]: Change from FFMPEG-4.2 to FFMPEG.  Add PROTOBUF and XCB-PROTO/PYTHON2.

gnu: python-psutil: Update to 5.7.2.

* gnu/packages/python-xyz.scm (python-psutil): Update to 5.7.2.

gnu: sbcl-mcclim-fonts-truetype: Fix build.

* gnu/packages/lisp-xyz.scm (sbcl-mcclim-fonts-truetype)[inputs]: Add
  font-dejavu.
  [arguments]: Add 'fix-paths' phase and don't disable test phase.

gnu: python-humanfriendly: Update to 8.2.

* gnu/packages/python-xyz.scm (python-humanfriendly): Upgrade to 8.2.

gnu: python-humanfriendly: Don't propagate python-monotonic.

python-monotonic targets python-2 and early versions of python-3.

* gnu/packages/python-xyz.scm (python-humanfriendly)[propagated-inputs]:
Remove python-monotonic.
[properties]: New field.
(python2-humanfriendly): Adjust accordingly.

gnu: python-language-server: Remove comment in inputs.

* gnu/packages/python-xyz.scm (python-language-server)[inputs]: Remove comment
introduced in dcff9bda97d088a717d6f7c01bdf7c0e68d62b9b about using special
versions of packages.

gnu: python-language-server: Update to 0.34.1.

* gnu/packages/python-xyz.scm (python-language-server): Update to 0.34.1.

gnu: lean: Update to 3.17.1.

* gnu/packages/lean.scm (lean): Update to 3.17.1.

gnu: straw-viewer: Update to 0.0.6.

* gnu/packages/video.scm (straw-viewer): Update to 0.0.6.

gnu: swi-prolog: Update to 8.3.4.

* gnu/packages/prolog.scm (swi-prolog): Update to 8.3.4.

[arguments]: Several test phases now pass that were broken previously, so
'delete-failing-tests-(pre/post) have been removed in favor of a single
'delete-failing-tests phase after unpack. The comment was revised to reflect
this change.

gnu: emacs-telega: Update to 0.6.27.

* gnu/packages/emacs-xyz.scm (emacs-telega): Update to 0.6.27.

[arguments]: Move 'telega-paths-patch after check phase to work around
substituting store paths for ffmpeg and ffplay.

gnu: tdlib: Update to 1.6.6.

* gnu/packages/messaging.scm (tdlib): Update to 1.6.6.

gnu: Add GNOME MultiWriter.

* gnu/packages/gnome.scm (gnome-multi-writer): New variable.

gnu: clamav: Update to 0.102.4.

* gnu/packages/antivirus.scm (clamav): Update to 0.102.4.

gnu: 7kaa: Update to 2.15.4p1.

* gnu/packages/games.scm (7kaa): Update to 2.15.4p1.

gnu: nnn: Update to 3.3.

* gnu/packages/admin.scm (nnn): Update to 3.3.

gnu: r-loo: Update to 2.3.1.

* gnu/packages/cran.scm (r-loo): Update to 2.3.1.

gnu: libzip: Update to 1.7.3.

* gnu/packages/compression.scm (libzip): Update to 1.7.3.

gnu: simplescreenrecorder: Update to 0.4.2.

* gnu/packages/video.scm (simplescreenrecorder): Update to 0.4.2.
[inputs]: Add libxinerama.

.guix-authorizations: Add brettgilio (back) to the committers.

* .guix-authorizations: Add fingerprint for brettgilio.

gnu: java-hamcrest-library: Fix race condition.

* gnu/packages/java.scm (java-hamcrest-library)[arguments]: Fix
build.xml in the same way it is fixed in java-hamcrest-all to prevent a
race condition.

gnu: rust-dirs-sys-0.3: Update to 0.3.5.

* gnu/packages/crates-io.scm (rust-dirs-sys-0.3): Update to 0.3.5.
  (rust-dirs-2.0, rust-dirs-sys-0.3): Don't skip build.

gnu: ruby-yard: Make the package reproducible.

* gnu/packages/ruby.scm (ruby-yard)[phases]: Add a 'do-not-set-date-in-gemspec
phase.