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HCoop / jackhill / guix / guix.git / history

[jackhill/guix/guix.git] / gnu / packages / bioinformatics.scm

2020-01-03	Pierre Neidhardt	gnu: uglify-js: Move back next to sbcl-cl-uglify-js...	blob \| commitdiff \| raw
2019-12-27	Ricardo Wurmus	gnu: r-topgo: Update to 2.38.1.	blob \| commitdiff \| raw \| diff to current
2019-12-27	Ricardo Wurmus	gnu: r-summarizedexperiment: Update to 1.16.1.	blob \| commitdiff \| raw \| diff to current
2019-12-27	Ricardo Wurmus	gnu: r-delayedarray: Update to 0.12.1.	blob \| commitdiff \| raw \| diff to current
2019-12-27	Ricardo Wurmus	gnu: r-biocparallel: Update to 1.20.1.	blob \| commitdiff \| raw \| diff to current
2019-12-27	Ricardo Wurmus	gnu: r-shortread: Update to 1.44.1.	blob \| commitdiff \| raw \| diff to current
2019-12-23	Brett Gilio	gnu: python-bbknn: Update to 1.3.6.	blob \| commitdiff \| raw \| diff to current
2019-12-23	Mădălin Ionel Patrașcu	gnu: tophat: Build with GCC 5	blob \| commitdiff \| raw \| diff to current
2019-12-21	Mădălin Ionel Patrașcu	gnu: fastx-toolkit: Build with GCC 6	blob \| commitdiff \| raw \| diff to current
2019-12-20	Ricardo Wurmus	gnu: r-scater: Update to 1.14.6.	blob \| commitdiff \| raw \| diff to current
2019-12-18	Marius Bakke	Merge branch 'master' into staging	blob \| commitdiff \| raw \| diff to current
2019-12-17	Ricardo Wurmus	gnu: Add libsbml.	blob \| commitdiff \| raw \| diff to current
2019-12-17	Ricardo Wurmus	gnu: r-seurat: Update to 3.1.2.	blob \| commitdiff \| raw \| diff to current
2019-12-16	Ricardo Wurmus	gnu: python-gffutils: Update description.	blob \| commitdiff \| raw \| diff to current
2019-12-16	Mădălin Ionel Patrașcu	gnu: Add python-gffutils.	blob \| commitdiff \| raw \| diff to current
2019-12-16	Mădălin Ionel Patrașcu	gnu: python-pyfaidx: Update to 0.5.7.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-genefilter: Update to 1.68.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-deseq2: Update to 1.26.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-dexseq: Update to 1.32.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-annotationforge: Update to 1.28.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-rbgl: Update to 1.62.1.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-gseabase: Update to 1.48.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-category: Update to 2.52.1.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-gostats: Update to 2.52.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-shortread: Update to 1.44.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-systempiper: Update to 1.20.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-grohmm: Update to 1.20.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-biocviews: Update to 1.54.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-biocstyle: Update to 2.14.2.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-bioccheck: Update to 1.22.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-s4vectors: Update to 0.24.1.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-iranges: Update to 2.20.1.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-genomeinfodb: Update to 1.22.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-edger: Update to 3.28.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-variantannotation: Update to 1.32.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-limma: Update to 3.42.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-xvector: Update to 0.26.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-genomicranges: Update to 1.38.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-biobase: Update to 2.46.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-annotationdbi: Update to 1.48.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-biomart: Update to 2.42.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-biocparallel: Update to 1.20.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-biostrings: Update to 2.54.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-rsamtools: Update to 2.2.1.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-delayedarray: Update to 0.12.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-summarizedexperiment: Update to 1.16.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-genomicalignments: Update to 1.22.1.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-rtracklayer: Update to 1.46.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-genomicfeatures: Update to 1.38.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-topgo: Update to 2.37.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-bsgenome: Update to 1.54.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-impute: Update to 1.60.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-seqpattern: Update to 1.18.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-genomation: Update to 1.18.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-seqlogo: Update to 1.52.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-motifrg: Update to 1.30.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-zlibbioc: Update to 1.32.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-rhtslib: Update to 1.18.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-bamsignals: Update to 1.18.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-rcas: Update to 1.12.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-mutationalpatterns: Update to 1.12.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-tximport: Update to 1.14.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-rhdf5: Update to 2.30.1.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-pcamethods: Update to 1.78.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-msnbase: Update to 2.12.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-msnid: Update to 1.20.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-aroma-light: Update to 3.16.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-deseq: Update to 1.38.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-edaseq: Update to 2.20.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-interactivedisplaybase: Update to 1.24.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-annotationhub: Update to 2.18.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-fastseg: Update to 1.32.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-keggrest: Update to 1.26.1.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-gage: Update to 2.36.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-genomicfiles: Update to 1.22.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-complexheatmap: Update to 2.2.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-dirichletmultinomial: Update to 1.28.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-ensembldb: Update to 2.10.2.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-organismdbi: Update to 1.28.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-biovizbase: Update to 1.34.1.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-ggbio: Update to 1.34.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-gqtlbase: Update to 1.18.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-erma: Update to 1.2.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-snpstats: Update to 1.36.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-ldblock: Update to 1.16.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-gqtlstats: Update to 1.18.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-gviz: Update to 1.30.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-sushi: Update to 1.24.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-gwascat: Update to 2.18.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-hitc: Update to 1.30.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-fithic: Update to 1.12.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-hdf5array: Update to 1.14.1.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-rhdf5lib: Update to 1.8.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-beachmat: Update to 2.2.1.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-singlecellexperiment: Update to 1.8.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-scater: Update to 1.14.5.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-scran: Update to 1.14.5.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-delayedmatrixstats: Update to 1.8.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-mzid: Update to 1.24.0.	blob \| commitdiff \| raw \| diff to current
2019-12-15	Ricardo Wurmus	gnu: r-vsn: Update to 3.54.0.	blob \| commitdiff \| raw \| diff to current
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jackhill's copy of GNU Guix: https://guix.gnu.org/

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