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gnu: minimap2: Fix build on aarch64-linux.
[jackhill/guix/guix.git]
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gnu
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packages
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bioinformatics.scm
2020-12-07
Efraim Flashner
gnu: minimap2: Fix build on aarch64-linux.
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2020-12-07
Efraim Flashner
gnu: minimap2: Prepare for cross compilation.
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2020-12-01
Ricardo Wurmus
gnu: java-picard-1.113: Use ant/java8.
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2020-11-30
Ricardo Wurmus
gnu: pigx-chipseq: Update to 0.0.51.
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2020-11-30
Ricardo Wurmus
gnu: pigx-scrnaseq: Update to 1.1.7.
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2020-11-28
Marius Bakke
Merge branch 'staging'
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2020-11-26
Marius Bakke
Merge branch 'master' into staging
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2020-11-26
Marius Bakke
Merge branch 'master' into staging
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2020-11-24
Maxim Cournoyer
gnu: tadbit: Update to 1.0.1.
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2020-11-24
Maxim Cournoyer
gnu: imp: Migrate to Python 3.
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2020-11-23
Marius Bakke
Merge branch 'master' into staging
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2020-11-23
Ludovic Courtès
Merge branch 'version-1.2.0'
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2020-11-23
Efraim Flashner
gnu: Add cwltool.
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2020-11-23
Efraim Flashner
gnu: Add python-schema-salad.
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2020-11-22
Marius Bakke
Merge branch 'master' into staging
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2020-11-20
Maxim Cournoyer
Merge branch 'version-1.2.0' into master.
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2020-11-18
Marius Bakke
Merge branch 'master' into staging
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2020-11-18
Tobias Geerinckx...
Merge remote-tracking branch 'upstream/version-1.2.0'
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2020-11-17
Maxim Cournoyer
Merge remote-tracking branch 'origin/version-1.2.0...
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2020-11-15
Marius Bakke
Merge branch 'master' into staging
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2020-11-15
Ricardo Wurmus
gnu: methyldackel: Update to 0.5.1.
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2020-11-13
Ludovic Courtès
Merge branch 'version-1.2.0' of ssh://git.sv.gnu.org...
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2020-11-13
Maxim Cournoyer
gnu: python-pysam: Update to version 0.16.0.1.
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2020-11-13
Roel Janssen
gnu: Fix build for python-pysam.
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2020-11-13
Roel Janssen
gnu: Add bcftools-1.9.
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2020-11-13
Roel Janssen
gnu: bedtools: Use samtools-1.9.
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2020-11-13
Roel Janssen
gnu: Add samtools-1.9.
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2020-11-13
Roel Janssen
gnu: Add htslib-1.9.
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2020-11-12
Ludovic Courtès
Merge branch 'version-1.2.0'
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2020-11-10
Marius Bakke
Merge branch 'master' into staging
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2020-11-09
Efraim Flashner
gnu: macs: Remove generated code.
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2020-11-09
Efraim Flashner
gnu: macs: Update check phase.
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2020-11-09
Efraim Flashner
gnu: macs: Update source, home-page URIs.
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2020-11-07
Marius Bakke
Merge remote-tracking branch 'origin/staging-next'...
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2020-11-07
Marius Bakke
Merge branch 'master' into staging
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2020-10-29
Roel Janssen
gnu: Update samtools to 1.11.
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2020-10-29
Roel Janssen
gnu: Update bcftools to 1.11.
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2020-10-29
Roel Janssen
gnu: Update htslib to 1.11.
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2020-10-23
Ludovic Courtès
gnu: imp: Update to 2.13.0.
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2020-10-18
Marius Bakke
Merge branch 'master' into staging
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2020-10-13
Marius Bakke
gnu: Remove redundant MariaDB inputs.
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2020-10-13
Marius Bakke
Merge branch 'master' into staging
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2020-10-07
Roel Janssen
gnu: htslib: Enable support for custom URI schemes.
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2020-10-06
Ricardo Wurmus
gnu: r-gqtlbase: Update to 1.20.4.
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2020-10-06
Ricardo Wurmus
gnu: r-rhdf5: Update to 2.32.3.
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2020-10-06
Ricardo Wurmus
gnu: r-biocstyle: Update to 2.16.1.
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2020-10-05
Guillaume Le Vaillant
Merge branch 'master' into staging
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2020-09-25
Mădălin Ionel Patrașcu
gnu: mafft: Update to 7.471.
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2020-09-23
Guillaume Le Vaillant
Merge branch 'wip-lisp' into staging
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2020-09-23
Guillaume Le Vaillant
Merge branch 'staging' into wip-lisp
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2020-09-22
Nicolas Goaziou
gnu: mafft: Use HTTPS home page URI.
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2020-09-14
zimoun
gnu: r-fithic: Move to (gnu packages bioconductor).
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2020-09-14
zimoun
gnu: r-hitc: Move to (gnu packages bioconductor).
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2020-09-14
zimoun
gnu: r-hdf5array: Move to (gnu packages bioconductor).
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2020-09-14
zimoun
gnu: r-rhdf5lib: Move to (gnu packages bioconductor).
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2020-09-14
zimoun
gnu: r-beachmat: Move to (gnu packages bioconductor).
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2020-09-14
zimoun
gnu: r-singlecellexperiment: Move to (gnu packages...
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2020-09-14
zimoun
gnu: r-scater: Move to (gnu packages bioconductor).
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2020-09-14
zimoun
gnu: r-scran: Move to (gnu packages bioconductor).
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2020-09-14
zimoun
gnu: r-delayedmatrixstats: Move to (gnu packages biocon...
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2020-09-11
zimoun
gnu: r-absfiltergsea: Move to (gnu packages cran).
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2020-09-11
zimoun
gnu: r-diversitree: Move to (gnu packages cran).
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2020-09-11
zimoun
gnu: r-phangorn: Move to (gnu packages cran).
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2020-09-11
zimoun
gnu: r-seurat: Move to (gnu packages cran).
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2020-09-11
zimoun
gnu: r-maldiquant: Move to (gnu packages cran).
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2020-09-11
zimoun
gnu: r-seqminer: Move to (gnu packages cran).
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2020-09-11
zimoun
gnu: r-qtl2: Move to (gnu packages cran).
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2020-09-11
zimoun
gnu: r-qtl: Move to (gnu packages cran).
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2020-09-10
Roel Janssen
gnu: Move r-bisquerna.
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2020-09-09
Ricardo Wurmus
Revert "gnu: Add r-loomr."
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2020-09-09
Roel Janssen
gnu: Add r-bisquerna.
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2020-09-09
Roel Janssen
gnu: Add r-loomr.
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2020-09-05
Andreas Enge
gnu: seqmagick: Update to 0.8.0.
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2020-09-05
Efraim Flashner
Merge remote-tracking branch 'origin/master' into staging
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2020-08-30
Efraim Flashner
gnu: delly: Update to 0.8.3.
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2020-08-27
Efraim Flashner
gnu: vcflib: Install pkgconfig file.
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2020-08-27
Efraim Flashner
gnu: vcflib: Use shared libraries.
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2020-08-27
Efraim Flashner
gnu: fastahack: Install pkgconfig file.
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2020-08-27
Efraim Flashner
gnu: fastahack: Build and install shared library and...
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2020-08-27
Efraim Flashner
gnu: smithwaterman: Install pkgconfig file.
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2020-08-27
Efraim Flashner
gnu: smithwaterman: Build and install shared library...
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2020-08-27
Efraim Flashner
gnu: tabixpp: Install pkgconfig file.
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2020-08-27
Efraim Flashner
gnu: tabixpp: Build and install shared library and...
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2020-08-20
Ricardo Wurmus
gnu: r-complexheatmap: Update to 2.4.3.
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2020-08-20
Ricardo Wurmus
gnu: r-gage: Update to 2.38.3.
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2020-08-20
Ricardo Wurmus
gnu: r-annotationhub: Update to 2.20.2.
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2020-08-20
Ricardo Wurmus
gnu: r-delayedarray: Update to 0.14.1.
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2020-08-20
Ricardo Wurmus
gnu: r-annotationdbi: Update to 1.50.3.
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2020-08-20
Ricardo Wurmus
gnu: r-biocviews: Update to 1.56.2.
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2020-08-19
Ricardo Wurmus
gnu: pigx-chipseq: Update to 0.0.43.
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2020-08-18
Ricardo Wurmus
gnu: bowtie1: Add missing Python input.
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2020-08-16
Ricardo Wurmus
gnu: pigx-bsseq: Update to 0.1.2.
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2020-08-16
Ricardo Wurmus
gnu: pigx-scrnaseq: Use statically linked Pandoc.
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2020-08-16
Ricardo Wurmus
gnu: pigx-bsseq: Use statically linked Pandoc.
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2020-08-16
Ricardo Wurmus
gnu: pigx-chipseq: Use statically linked Pandoc.
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diff to current
2020-08-16
Ricardo Wurmus
gnu: pigx-rnaseq: Use statically linked Pandoc.
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2020-08-16
Ricardo Wurmus
gnu: r-rcas: Use pandoc instead of ghc-pandoc.
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2020-08-15
Ricardo Wurmus
gnu: hisat2: Use pandoc instead of ghc-pandoc.
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2020-08-15
Ricardo Wurmus
Merge remote-tracking branch 'origin/master' into wip...
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2020-08-12
Ricardo Wurmus
gnu: tophat: Hide default GCC.
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