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gnu: hisat2: Use pandoc instead of ghc-pandoc.
author
Ricardo Wurmus
<rekado@elephly.net>
Sat, 15 Aug 2020 08:10:39 +0000
(10:10 +0200)
committer
Ricardo Wurmus
<rekado@elephly.net>
Sat, 15 Aug 2020 08:10:39 +0000
(10:10 +0200)
* gnu/packages/bioinformatics.scm (hisat2)[native-inputs]: Replace ghc-pandoc
with pandoc.
gnu/packages/bioinformatics.scm
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diff --git
a/gnu/packages/bioinformatics.scm
b/gnu/packages/bioinformatics.scm
index
2f4a2b1
..
cfe8d71
100644
(file)
--- a/
gnu/packages/bioinformatics.scm
+++ b/
gnu/packages/bioinformatics.scm
@@
-3617,7
+3617,7
@@
particular, reads spanning multiple exons.")
(native-inputs
`(("unzip" ,unzip) ; needed for archive from ftp
("perl" ,perl)
- ("pandoc" ,
ghc-pandoc)))
; for documentation
+ ("pandoc" ,
pandoc)))
; for documentation
(home-page "https://ccb.jhu.edu/software/hisat2/index.shtml")
(synopsis "Graph-based alignment of genomic sequencing reads")
(description "HISAT2 is a fast and sensitive alignment program for mapping