visualize the intersection of genomic sites/regions with genomic
annotations.")
(license license:gpl3)))
+
+(define-public r-rsubread
+ (package
+ (name "r-rsubread")
+ (version "1.34.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "Rsubread" version))
+ (sha256
+ (base32
+ "0bsrw61wcav0q22c5m6gr0vn1f3c3ld8gxj730wcab6dj196z6q3"))))
+ (properties `((upstream-name . "Rsubread")))
+ (build-system r-build-system)
+ (inputs `(("zlib" ,zlib)))
+ (home-page "https://bioconductor.org/packages/Rsubread/")
+ (synopsis "Subread sequence alignment and counting for R")
+ (description
+ "This package provides tools for alignment, quantification and analysis
+of second and third generation sequencing data. It includes functionality for
+read mapping, read counting, SNP calling, structural variant detection and
+gene fusion discovery. It can be applied to all major sequencing techologies
+and to both short and long sequence reads.")
+ (license license:gpl3)))