gnu/packages/package-management.scm

   1 ;;; GNU Guix --- Functional package management for GNU
   2 ;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
   3 ;;; Copyright © 2015, 2017, 2020 Ricardo Wurmus <rekado@elephly.net>
   4 ;;; Copyright © 2017 Muriithi Frederick Muriuki <fredmanglis@gmail.com>
   5 ;;; Copyright © 2017, 2018 Oleg Pykhalov <go.wigust@gmail.com>
   6 ;;; Copyright © 2017 Roel Janssen <roel@gnu.org>
   7 ;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
   8 ;;; Copyright © 2018 Julien Lepiller <julien@lepiller.eu>
   9 ;;; Copyright © 2018, 2019 Rutger Helling <rhelling@mykolab.com>
  10 ;;; Copyright © 2018 Sou Bunnbu <iyzsong@member.fsf.org>
  11 ;;; Copyright © 2018, 2019 Eric Bavier <bavier@member.fsf.org>
  12 ;;; Copyright © 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
  13 ;;; Copyright © 2019 Jonathan Brielmaier <jonathan.brielmaier@web.de>
  14 ;;; Copyright © 2020 Mathieu Othacehe <m.othacehe@gmail.com>
  15 ;;; Copyright © 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
  16 ;;; Copyright © 2020 Giacomo Leidi <goodoldpaul@autistici.org>
  17 ;;; Copyright © 2020 Jesse Gibbons <jgibbons2357+guix@gmail.com>
  18 ;;; Copyright © 2020 Martin Becze <mjbecze@riseup.net>
  19 ;;;
  20 ;;; This file is part of GNU Guix.
  21 ;;;
  22 ;;; GNU Guix is free software; you can redistribute it and/or modify it
  23 ;;; under the terms of the GNU General Public License as published by
  24 ;;; the Free Software Foundation; either version 3 of the License, or (at
  25 ;;; your option) any later version.
  26 ;;;
  27 ;;; GNU Guix is distributed in the hope that it will be useful, but
  28 ;;; WITHOUT ANY WARRANTY; without even the implied warranty of
  29 ;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  30 ;;; GNU General Public License for more details.
  31 ;;;
  32 ;;; You should have received a copy of the GNU General Public License
  33 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
  34
  35 (define-module (gnu packages package-management)
  36   #:use-module (gnu packages)
  37   #:use-module (gnu packages acl)
  38   #:use-module (gnu packages attr)
  39   #:use-module (gnu packages avahi)
  40   #:use-module (gnu packages autotools)
  41   #:use-module (gnu packages backup)
  42   #:use-module (gnu packages base)
  43   #:use-module (gnu packages bash)
  44   #:use-module (gnu packages bdw-gc)
  45   #:use-module (gnu packages bison)
  46   #:use-module (gnu packages boost)
  47   #:use-module (gnu packages bootstrap)          ;for 'bootstrap-guile-origin'
  48   #:use-module (gnu packages check)
  49   #:use-module (gnu packages compression)
  50   #:use-module (gnu packages cpio)
  51   #:use-module (gnu packages crypto)
  52   #:use-module (gnu packages curl)
  53   #:use-module (gnu packages dbm)
  54   #:use-module (gnu packages docbook)
  55   #:use-module (gnu packages file)
  56   #:use-module (gnu packages gettext)
  57   #:use-module (gnu packages glib)
  58   #:use-module (gnu packages gnome)
  59   #:use-module (gnu packages gnupg)
  60   #:use-module (gnu packages graphviz)
  61   #:use-module (gnu packages gtk)
  62   #:use-module (gnu packages guile)
  63   #:use-module (gnu packages guile-xyz)
  64   #:use-module (gnu packages hurd)
  65   #:use-module (gnu packages libedit)
  66   #:use-module (gnu packages linux)
  67   #:use-module (gnu packages lisp)
  68   #:use-module (gnu packages man)
  69   #:use-module (gnu packages nettle)
  70   #:use-module (gnu packages networking)
  71   #:use-module (gnu packages nss)
  72   #:use-module (gnu packages patchutils)
  73   #:use-module (gnu packages perl)
  74   #:use-module (gnu packages perl-check)
  75   #:use-module (gnu packages pkg-config)
  76   #:use-module (gnu packages popt)
  77   #:use-module (gnu packages python)
  78   #:use-module (gnu packages python-web)
  79   #:use-module (gnu packages python-xyz)
  80   #:use-module (gnu packages serialization)
  81   #:use-module (gnu packages sqlite)
  82   #:use-module (gnu packages ssh)
  83   #:use-module (gnu packages texinfo)
  84   #:use-module (gnu packages time)
  85   #:use-module (gnu packages tls)
  86   #:use-module (gnu packages vim)
  87   #:use-module (gnu packages virtualization)
  88   #:use-module (gnu packages web)
  89   #:use-module (gnu packages xml)
  90   #:use-module (gnu packages xorg)
  91   #:use-module (guix build-system glib-or-gtk)
  92   #:use-module (guix build-system gnu)
  93   #:use-module (guix build-system meson)
  94   #:use-module (guix build-system python)
  95   #:use-module (guix download)
  96   #:use-module (guix gexp)
  97   #:use-module (guix git-download)
  98   #:use-module ((guix licenses) #:prefix license:)
  99   #:use-module (guix packages)
 100   #:use-module (guix utils)
 101   #:use-module (ice-9 match)
 102   #:use-module (srfi srfi-1))
 103
 104 (define (boot-guile-uri arch)
 105   "Return the URI for the bootstrap Guile tarball for ARCH."
 106   (cond ((string=? "armhf" arch)
 107          (string-append "http://alpha.gnu.org/gnu/guix/bootstrap/"
 108                         arch "-linux"
 109                         "/20150101/guile-2.0.11.tar.xz"))
 110         ((string=? "aarch64" arch)
 111          (string-append "http://alpha.gnu.org/gnu/guix/bootstrap/"
 112                         arch "-linux/20170217/guile-2.0.14.tar.xz"))
 113         (else
 114          (string-append "http://alpha.gnu.org/gnu/guix/bootstrap/"
 115                         arch "-linux"
 116                         "/20131110/guile-2.0.9.tar.xz"))))
 117
 118 ;; NOTE: The commit IDs used here form a linked list threaded through the git
 119 ;; history. In a phenomenon known as boot-stripping, not only the head of this
 120 ;; list is used, but also a few older versions, when a guix from this package is
 121 ;; used to build something also depending on guix.
 122 ;;
 123 ;; Therefore, if, by accident, you set this package to a non-existent commit ID,
 124 ;; it is insufficient to simply correct it with the latest commit.
 125 ;; Instead, please push one commit that rolls back Guix to before the mistake,
 126 ;; and then another that points to the first one. That way, the faulty commit
 127 ;; won't appear on the linked list.
 128 (define-public guix
 129   ;; Latest version of Guix, which may or may not correspond to a release.
 130   ;; Note: the 'update-guix-package.scm' script expects this definition to
 131   ;; start precisely like this.
 132   (let ((version "1.1.0")
 133         (commit "1c21468c7a7d09fbe065d1ceebf5f542537c877c")
 134         (revision 27))
 135     (package
 136       (name "guix")
 137
 138       (version (if (zero? revision)
 139                    version
 140                    (string-append version "-"
 141                                   (number->string revision)
 142                                   "." (string-take commit 7))))
 143       (source (origin
 144                 (method git-fetch)
 145                 (uri (git-reference
 146                       (url "https://git.savannah.gnu.org/r/guix.git")
 147                       (commit commit)))
 148                 (sha256
 149                  (base32
 150                   "0bprn9inpqmc41ldcykl5pnybgz3slflrnb9pywfn3gsr4r48lbm"))
 151                 (file-name (string-append "guix-" version "-checkout"))))
 152       (build-system gnu-build-system)
 153       (arguments
 154        `(#:configure-flags (list
 155                             "--localstatedir=/var"
 156                             "--sysconfdir=/etc"
 157                             (string-append "--with-bash-completion-dir="
 158                                            (assoc-ref %outputs "out")
 159                                            "/etc/bash_completion.d")
 160
 161                             ;; Set 'DOT_USER_PROGRAM' to the empty string so
 162                             ;; we don't keep a reference to Graphviz, whose
 163                             ;; closure is pretty big (too big for the Guix
 164                             ;; system installation image.)
 165                             "ac_cv_path_DOT_USER_PROGRAM=dot"
 166
 167                             ;; To avoid problems with the length of shebangs,
 168                             ;; choose a fixed-width and short directory name
 169                             ;; for tests.
 170                             "ac_cv_guix_test_root=/tmp/guix-tests"
 171                             ,@(if (hurd-target?) '("--with-courage") '()))
 172          #:parallel-tests? #f         ;work around <http://bugs.gnu.org/21097>
 173
 174          #:modules ((guix build gnu-build-system)
 175                     (guix build utils)
 176                     (srfi srfi-26)
 177                     (ice-9 popen)
 178                     (ice-9 rdelim))
 179
 180          #:phases (modify-phases %standard-phases
 181                     (replace 'bootstrap
 182                       (lambda _
 183                         ;; Make sure 'msgmerge' can modify the PO files.
 184                         (for-each (lambda (po)
 185                                     (chmod po #o666))
 186                                   (find-files "." "\\.po$"))
 187
 188                         (patch-shebang "build-aux/git-version-gen")
 189
 190                         (call-with-output-file ".tarball-version"
 191                           (lambda (port)
 192                             (display ,version port)))
 193
 194                         ;; Install SysV init files to $(prefix)/etc rather
 195                         ;; than to /etc.
 196                         (substitute* "nix/local.mk"
 197                           (("^sysvinitservicedir = .*$")
 198                            (string-append "sysvinitservicedir = \
 199 $(prefix)/etc/init.d\n")))
 200
 201                         (invoke "sh" "bootstrap")))
 202                     (add-before 'build 'use-host-compressors
 203                       (lambda* (#:key inputs target #:allow-other-keys)
 204                         (when target
 205                           ;; Use host compressors.
 206                           (let ((bzip2 (assoc-ref inputs "bzip2"))
 207                                 (gzip (assoc-ref inputs "gzip"))
 208                                 (xz (assoc-ref inputs "xz")))
 209                             (substitute* "guix/config.scm"
 210                               (("\"[^\"]*/bin/bzip2")
 211                                (string-append "\"" bzip2 "/bin/bzip2"))
 212                               (("\"[^\"]*/bin/gzip") gzip
 213                                (string-append "\"" gzip "/bin/gzip"))
 214                               (("\"[^\"]*/bin//xz")
 215                                (string-append "\"" xz "/bin/xz")))))
 216                         #t))
 217                     (add-before 'check 'copy-bootstrap-guile
 218                       (lambda* (#:key system target inputs #:allow-other-keys)
 219                         ;; Copy the bootstrap guile tarball in the store
 220                         ;; used by the test suite.
 221                         (define (intern file recursive?)
 222                           ;; Note: don't use 'guix download' here because we
 223                           ;; need to set the 'recursive?' argument.
 224                           (define base
 225                             (strip-store-file-name file))
 226
 227                           (define code
 228                             `(begin
 229                                (use-modules (guix))
 230                                (with-store store
 231                                  (let* ((item (add-to-store store ,base
 232                                                             ,recursive?
 233                                                             "sha256" ,file))
 234                                         (root (string-append "/tmp/gc-root-"
 235                                                              (basename item))))
 236                                    ;; Register a root so that the GC tests
 237                                    ;; don't delete those.
 238                                    (symlink item root)
 239                                    (add-indirect-root store root)))))
 240
 241                           (invoke "./test-env" "guile" "-c"
 242                                   (object->string code)))
 243
 244                         (unless target
 245                           (intern (assoc-ref inputs "boot-guile") #f)
 246
 247                           ;; On x86_64 some tests need the i686 Guile.
 248                           ,@(if (and (not (%current-target-system))
 249                                      (string=? (%current-system)
 250                                                "x86_64-linux"))
 251                                 '((intern (assoc-ref inputs "boot-guile/i686") #f))
 252                                 '())
 253
 254                           ;; Copy the bootstrap executables.
 255                           (for-each (lambda (input)
 256                                       (intern (assoc-ref inputs input) #t))
 257                                     '("bootstrap/bash" "bootstrap/mkdir"
 258                                       "bootstrap/tar" "bootstrap/xz")))
 259                         #t))
 260                     (add-after 'unpack 'disable-failing-tests
 261                       ;; XXX FIXME: These tests fail within the build container.
 262                       (lambda _
 263                         (substitute* "tests/syscalls.scm"
 264                           (("^\\(test-(assert|equal) \"(clone|setns|pivot-root)\"" all)
 265                            (string-append "(test-skip 1)\n" all)))
 266                         (substitute* "tests/containers.scm"
 267                           (("^\\(test-(assert|equal)" all)
 268                            (string-append "(test-skip 1)\n" all)))
 269                         (when (file-exists? "tests/guix-environment-container.sh")
 270                           (substitute* "tests/guix-environment-container.sh"
 271                             (("guix environment --version")
 272                              "exit 77\n")))
 273                         #t))
 274                     (add-before 'check 'set-SHELL
 275                       (lambda _
 276                         ;; 'guix environment' tests rely on 'SHELL' having a
 277                         ;; correct value, so set it.
 278                         (setenv "SHELL" (which "sh"))
 279                         #t))
 280                     (add-after 'install 'wrap-program
 281                       (lambda* (#:key inputs native-inputs outputs target
 282                                 #:allow-other-keys)
 283                         ;; Make sure the 'guix' command finds GnuTLS,
 284                         ;; Guile-JSON, and Guile-Git automatically.
 285                         (let* ((out    (assoc-ref outputs "out"))
 286                                (guile  ,@(if (%current-target-system)
 287                                              '((assoc-ref native-inputs "guile"))
 288                                              '((assoc-ref inputs "guile"))))
 289                                (gcrypt (assoc-ref inputs "guile-gcrypt"))
 290                                (json   (assoc-ref inputs "guile-json"))
 291                                (sqlite (assoc-ref inputs "guile-sqlite3"))
 292                                (zlib   (assoc-ref inputs "guile-zlib"))
 293                                (lzlib  (assoc-ref inputs "guile-lzlib"))
 294                                (git    (assoc-ref inputs "guile-git"))
 295                                (bs     (assoc-ref inputs
 296                                                   "guile-bytestructures"))
 297                                (ssh    (assoc-ref inputs "guile-ssh"))
 298                                (gnutls (assoc-ref inputs "gnutls"))
 299                                (locales (assoc-ref inputs "glibc-utf8-locales"))
 300                                (deps   (list gcrypt json sqlite gnutls
 301                                              git bs ssh zlib lzlib))
 302                                (effective
 303                                 (read-line
 304                                  (open-pipe* OPEN_READ
 305                                              (string-append guile "/bin/guile")
 306                                              "-c" "(display (effective-version))")))
 307                                (path   (string-join
 308                                         (map (cut string-append <>
 309                                                   "/share/guile/site/"
 310                                                   effective)
 311                                              (delete #f deps))
 312                                         ":"))
 313                                (gopath (string-join
 314                                         (map (cut string-append <>
 315                                                   "/lib/guile/" effective
 316                                                   "/site-ccache")
 317                                              (delete #f deps))
 318                                         ":"))
 319                                (locpath (string-append locales "/lib/locale")))
 320
 321                           (wrap-program (string-append out "/bin/guix")
 322                             `("GUILE_LOAD_PATH" ":" prefix (,path))
 323                             `("GUILE_LOAD_COMPILED_PATH" ":" prefix (,gopath))
 324                             `("GUIX_LOCPATH" ":" suffix (,locpath)))
 325
 326                           (when target
 327                             ;; XXX Touching wrap-program rebuilds world
 328                             (let ((bash (assoc-ref inputs "bash")))
 329                               (substitute* (string-append out "/bin/guix")
 330                                 (("^#!.*/bash") (string-append "#! " bash "/bin/bash")))))
 331                           #t))))))
 332       (native-inputs `(("pkg-config" ,pkg-config)
 333
 334                        ;; Guile libraries are needed here for
 335                        ;; cross-compilation.
 336                        ("guile" ,guile-3.0-latest) ;for faster builds
 337                        ("gnutls" ,gnutls)
 338                        ("guile-gcrypt" ,guile-gcrypt)
 339                        ("guile-json" ,guile-json-4)
 340                        ("guile-sqlite3" ,guile-sqlite3)
 341                        ("guile-zlib" ,guile-zlib)
 342                        ("guile-lzlib" ,guile-lzlib)
 343                        ("guile-ssh" ,guile-ssh)
 344                        ("guile-git" ,guile-git)
 345
 346                        ;; XXX: Keep the development inputs here even though
 347                        ;; they're unnecessary, just so that 'guix environment
 348                        ;; guix' always contains them.
 349                        ("autoconf" ,autoconf-wrapper)
 350                        ("automake" ,automake)
 351                        ("gettext" ,gettext-minimal)
 352                        ("texinfo" ,texinfo)
 353                        ("graphviz" ,graphviz)
 354                        ("help2man" ,help2man)
 355                        ("po4a" ,po4a)))
 356       (inputs
 357        `(("bzip2" ,bzip2)
 358          ("gzip" ,gzip)
 359          ("sqlite" ,sqlite)
 360          ("libgcrypt" ,libgcrypt)
 361
 362          ("guile" ,guile-3.0-latest)
 363
 364          ;; Some of the tests use "unshare" when it is available.
 365          ("util-linux" ,util-linux)
 366
 367          ;; Many tests rely on the 'guile-bootstrap' package, which is why we
 368          ;; have it here.
 369          ("boot-guile" ,(bootstrap-guile-origin (%current-system)))
 370          ,@(if (and (not (%current-target-system))
 371                     (string=? (%current-system) "x86_64-linux"))
 372                `(("boot-guile/i686" ,(bootstrap-guile-origin "i686-linux")))
 373                '())
 374          ,@(if (%current-target-system)
 375                `(("bash" ,bash-minimal)
 376                  ("xz" ,xz))
 377                '())
 378
 379          ;; Tests also rely on these bootstrap executables.
 380          ("bootstrap/bash" ,(bootstrap-executable "bash" (%current-system)))
 381          ("bootstrap/mkdir" ,(bootstrap-executable "mkdir" (%current-system)))
 382          ("bootstrap/tar" ,(bootstrap-executable "tar" (%current-system)))
 383          ("bootstrap/xz" ,(bootstrap-executable "xz" (%current-system)))
 384
 385          ("glibc-utf8-locales" ,glibc-utf8-locales)))
 386       (propagated-inputs
 387        `(("gnutls" ,(if (%current-target-system) gnutls-3.6.14 guile3.0-gnutls))
 388          ("guile-gcrypt" ,guile-gcrypt)
 389          ("guile-json" ,guile-json-4)
 390          ("guile-sqlite3" ,guile-sqlite3)
 391          ("guile-ssh" ,guile-ssh)
 392          ("guile-git" ,guile-git)
 393          ("guile-zlib" ,guile-zlib)
 394          ("guile-lzlib" ,guile-lzlib)))
 395
 396       (home-page "https://www.gnu.org/software/guix/")
 397       (synopsis "Functional package manager for installed software packages and versions")
 398       (description
 399        "GNU Guix is a functional package manager for the GNU system, and is
 400 also a distribution thereof.  It includes a virtual machine image.  Besides
 401 the usual package management features, it also supports transactional
 402 upgrades and roll-backs, per-user profiles, and much more.  It is based on
 403 the Nix package manager.")
 404       (license license:gpl3+)
 405       (properties '((ftp-server . "alpha.gnu.org"))))))
 406
 407 (define-public guix-daemon
 408   ;; This package is for internal consumption: it allows us to quickly build
 409   ;; the 'guix-daemon' program and use that in (guix self), used by 'guix
 410   ;; pull'.
 411   (package
 412     (inherit guix)
 413     (properties `((hidden? . #t)))
 414     (name "guix-daemon")
 415
 416     ;; Use a minimum set of dependencies.
 417     (native-inputs
 418      (fold alist-delete (package-native-inputs guix)
 419            '("po4a" "graphviz" "help2man")))
 420     (inputs
 421      `(("gnutls" ,guile3.0-gnutls)
 422        ("guile-git" ,guile-git)
 423        ("guile-json" ,guile-json-3)
 424        ("guile-gcrypt" ,guile-gcrypt)
 425        ,@(fold alist-delete (package-inputs guix)
 426                '("boot-guile" "boot-guile/i686" "util-linux"))))
 427
 428     (propagated-inputs '())
 429
 430     (arguments
 431      (substitute-keyword-arguments (package-arguments guix)
 432        ((#:configure-flags flags '())
 433         ;; Pretend we have those libraries; we don't actually need them.
 434         `(append ,flags
 435                  '("guix_cv_have_recent_guile_sqlite3=yes"
 436                    "guix_cv_have_recent_guile_ssh=yes")))
 437        ((#:tests? #f #f)
 438         #f)
 439        ((#:phases phases '%standard-phases)
 440         `(modify-phases ,phases
 441            (add-after 'unpack 'change-default-guix
 442              (lambda _
 443                ;; We need to tell 'guix-daemon' which 'guix' command to use.
 444                ;; Here we use a questionable hack where we hard-code root's
 445                ;; current guix, which could be wrong (XXX).  Note that scripts
 446                ;; like 'guix perform-download' do not run as root so we assume
 447                ;; that they have access to /var/guix/profiles/per-user/root.
 448                (substitute* "nix/libstore/globals.cc"
 449                  (("guixProgram = (.*)nixBinDir + \"/guix\"" _ before)
 450                   (string-append "guixProgram = " before
 451                                  "/var/guix/profiles/per-user/root\
 452 /current-guix/bin/guix")))
 453                #t))
 454            (replace 'build
 455              (lambda _
 456                (invoke "make" "nix/libstore/schema.sql.hh")
 457                (invoke "make" "-j" (number->string
 458                                     (parallel-job-count))
 459                        "guix-daemon")))
 460            (delete 'copy-bootstrap-guile)
 461            (replace 'install
 462              (lambda* (#:key outputs #:allow-other-keys)
 463                (invoke "make" "install-binPROGRAMS")))
 464            (delete 'wrap-program)))))))
 465
 466
 467 (define-public guile2.2-guix
 468   (package
 469     (inherit guix)
 470     (name "guile2.2-guix")
 471     (native-inputs
 472      `(("guile" ,guile-2.2)
 473        ("gnutls" ,guile2.2-gnutls)
 474        ("guile-gcrypt" ,guile2.2-gcrypt)
 475        ("guile-json" ,guile2.2-json)
 476        ("guile-sqlite3" ,guile2.2-sqlite3)
 477        ("guile-ssh" ,guile2.2-ssh)
 478        ("guile-git" ,guile2.2-git)
 479        ,@(fold alist-delete (package-native-inputs guix)
 480                '("guile" "gnutls" "guile-gcrypt" "guile-json"
 481                  "guile-sqlite3" "guile-ssh" "guile-git"))))
 482     (inputs
 483      `(("guile" ,guile-2.2)
 484        ,@(alist-delete "guile" (package-inputs guix))))
 485     (propagated-inputs
 486      `(("gnutls" ,gnutls)
 487        ("guile-gcrypt" ,guile2.2-gcrypt)
 488        ("guile-json" ,guile2.2-json)
 489        ("guile-sqlite3" ,guile2.2-sqlite3)
 490        ("guile-ssh" ,guile2.2-ssh)
 491        ("guile-git" ,guile2.2-git)))))
 492
 493 (define-public guile3.0-guix
 494   (deprecated-package "guile3.0-guix" guix))
 495
 496 (define-public guix-minimal
 497   ;; A version of Guix which is built with the minimal set of dependencies, as
 498   ;; outlined in the README "Requirements" section.  Intended as a CI job, so
 499   ;; marked as hidden.
 500   (hidden-package
 501    (package
 502      (inherit guix)
 503      (name "guix-minimal")
 504      (native-inputs
 505       (fold alist-delete
 506             (package-native-inputs guix)
 507             '("guile-ssh")))
 508      (propagated-inputs
 509       (fold alist-delete
 510             (package-propagated-inputs guix)
 511             '("guile-ssh"))))))
 512
 513 (define (source-file? file stat)
 514   "Return true if FILE is likely a source file, false if it is a typical
 515 generated file."
 516   (define (wrong-extension? file)
 517     (or (string-suffix? "~" file)
 518         (member (file-extension file)
 519                 '("o" "a" "lo" "so" "go"))))
 520
 521   (match (basename file)
 522     ((or ".git" "autom4te.cache" "configure" "Makefile" "Makefile.in" ".libs")
 523      #f)
 524     ((? wrong-extension?)
 525      #f)
 526     (_
 527      #t)))
 528
 529 (define-public current-guix-package
 530   ;; This parameter allows callers to override the package that 'current-guix'
 531   ;; returns.  This is useful when 'current-guix' cannot compute it by itself,
 532   ;; for instance because it's not running from a source code checkout.
 533   (make-parameter #f))
 534
 535 (define-public current-guix
 536   (let* ((repository-root (delay (canonicalize-path
 537                                   (string-append (current-source-directory)
 538                                                  "/../.."))))
 539          (select? (delay (or (git-predicate (force repository-root))
 540                              source-file?))))
 541     (lambda ()
 542       "Return a package representing Guix built from the current source tree.
 543 This works by adding the current source tree to the store (after filtering it
 544 out) and returning a package that uses that as its 'source'."
 545       (or (current-guix-package)
 546           (package
 547             (inherit guix)
 548             (version (string-append (package-version guix) "+"))
 549             (source (local-file (force repository-root) "guix-current"
 550                                 #:recursive? #t
 551                                 #:select? (force select?))))))))
 552
 553 \f
 554 ;;;
 555 ;;; Other tools.
 556 ;;;
 557
 558 (define-public nix
 559   (package
 560     (name "nix")
 561     (version "2.3.7")
 562     (source (origin
 563              (method url-fetch)
 564              (uri (string-append "http://nixos.org/releases/nix/nix-"
 565                                  version "/nix-" version ".tar.xz"))
 566              (sha256
 567               (base32
 568                "15p50jkss6szinisb7axhxybgfi29sm9grz7mxwair8ljj2553yx"))))
 569     (build-system gnu-build-system)
 570     (arguments
 571      `(#:configure-flags '("--sysconfdir=/etc" "--enable-gc")
 572        #:phases
 573        (modify-phases %standard-phases
 574          (replace 'install
 575            ;; Don't try & fail to create subdirectories in /etc, but keep them
 576            ;; in the output as examples.
 577            (lambda* (#:key (make-flags '()) outputs #:allow-other-keys)
 578              (let* ((out (assoc-ref outputs "out"))
 579                     (etc (string-append out "/etc")))
 580                (apply invoke "make" "install"
 581                       (string-append "sysconfdir=" etc)
 582                       (string-append "profiledir=" etc "/profile.d")
 583                       make-flags)))))))
 584     (native-inputs `(("pkg-config" ,pkg-config)))
 585     (inputs `(("boost" ,boost)
 586               ("brotli" ,brotli)
 587               ("bzip2" ,bzip2)
 588               ("curl" ,curl)
 589               ("editline" ,editline)
 590               ("libgc" ,libgc)
 591               ("libseccomp" ,libseccomp)
 592               ("libsodium" ,libsodium)
 593               ("openssl" ,openssl)
 594               ("sqlite" ,sqlite)
 595               ("xz" ,xz)))
 596     (home-page "https://nixos.org/nix/")
 597     (synopsis "The Nix package manager")
 598     (description
 599      "Nix is a purely functional package manager.  This means that it treats
 600 packages like values in purely functional programming languages such as
 601 Haskell—they are built by functions that don't have side-effects, and they
 602 never change after they have been built.  Nix stores packages in the Nix
 603 store, usually the directory /nix/store, where each package has its own unique
 604 sub-directory.")
 605     (license license:lgpl2.1+)))
 606
 607 (define-public stow
 608   (package
 609     (name "stow")
 610     (version "2.3.1")
 611     (source (origin
 612               (method url-fetch)
 613               (uri (string-append "mirror://gnu/stow/stow-"
 614                                   version ".tar.gz"))
 615               (sha256
 616                (base32
 617                 "0jrxy12ywn7smdzdnvwzjw77l6knx6jkj2rckgykg1dpf6bdkm89"))))
 618     (build-system gnu-build-system)
 619     (inputs
 620      `(("perl" ,perl)))
 621     (native-inputs
 622      `(("perl-test-simple" ,perl-test-simple)
 623        ("perl-test-output" ,perl-test-output)
 624        ("perl-capture-tiny" ,perl-capture-tiny)
 625        ("perl-io-stringy" ,perl-io-stringy)))
 626     (home-page "https://www.gnu.org/software/stow/")
 627     (synopsis "Managing installed software packages")
 628     (description
 629      "GNU Stow is a symlink manager.  It generates symlinks to directories
 630 of data and makes them appear to be merged into the same directory.  It is
 631 typically used for managing software packages installed from source, by
 632 letting you install them apart in distinct directories and then create
 633 symlinks to the files in a common directory such as /usr/local.")
 634     (license license:gpl3+)))
 635
 636 (define-public rpm
 637   (package
 638     (name "rpm")
 639     (version "4.14.2.1")
 640     (source (origin
 641               (method url-fetch)
 642               (uri (string-append "http://ftp.rpm.org/releases/rpm-"
 643                                   (version-major+minor version) ".x/rpm-"
 644                                   version ".tar.bz2"))
 645               (sha256
 646                (base32
 647                 "1nmck2fq9h85fgs3zhh6w1avlw5y16cbz5khd459ry3jfd5w4f8i"))))
 648     (build-system gnu-build-system)
 649     (arguments
 650      '(#:configure-flags '("--with-external-db"   ;use the system's bdb
 651                            "--enable-python"
 652                            "--without-lua")
 653        #:phases (modify-phases %standard-phases
 654                   (add-before 'configure 'set-nss-library-path
 655                     (lambda* (#:key inputs #:allow-other-keys)
 656                       (let ((nss (assoc-ref inputs "nss")))
 657                         (setenv "LIBRARY_PATH"
 658                                 (string-append (getenv "LIBRARY_PATH") ":"
 659                                                nss "/lib/nss"))
 660                         #t))))))
 661     (native-inputs
 662      `(("pkg-config" ,pkg-config)))
 663     (inputs
 664      `(("python" ,python)
 665        ("xz" ,xz)
 666        ("bdb" ,bdb)
 667        ("popt" ,popt)
 668        ("nss" ,nss)
 669        ("nspr" ,nspr)
 670        ("libarchive" ,libarchive)
 671        ("file" ,file)
 672        ("bzip2" ,bzip2)
 673        ("zlib" ,zlib)
 674        ("cpio" ,cpio)))
 675     (home-page "https://rpm.org/")
 676     (synopsis "The RPM Package Manager")
 677     (description
 678      "The RPM Package Manager (RPM) is a command-line driven package
 679 management system capable of installing, uninstalling, verifying, querying,
 680 and updating computer software packages.  Each software package consists of an
 681 archive of files along with information about the package like its version, a
 682 description.  There is also a library permitting developers to manage such
 683 transactions from C or Python.")
 684
 685     ;; The whole is GPLv2+; librpm itself is dual-licensed LGPLv2+ | GPLv2+.
 686     (license license:gpl2+)))
 687
 688 (define-public python-anaconda-client
 689   (package
 690     (name "python-anaconda-client")
 691     (version "1.6.3")
 692     (source
 693      (origin
 694        (method git-fetch)
 695        (uri (git-reference
 696               (url "https://github.com/Anaconda-Platform/anaconda-client")
 697               (commit version)))
 698        (file-name (git-file-name name version))
 699        (sha256
 700         (base32
 701          "0w1bfxnydjl9qp53r2gcvr6vlpdqqilcrzqxrll9sgg6vwdyiyyp"))))
 702     (build-system python-build-system)
 703     (propagated-inputs
 704      `(("python-pyyaml" ,python-pyyaml)
 705        ("python-requests" ,python-requests)
 706        ("python-clyent" ,python-clyent)))
 707     (native-inputs
 708      `(("python-pytz" ,python-pytz)
 709        ("python-dateutil" ,python-dateutil)
 710        ("python-mock" ,python-mock)
 711        ("python-coverage" ,python-coverage)
 712        ("python-pillow" ,python-pillow)))
 713     (arguments
 714      `(#:phases
 715        (modify-phases %standard-phases
 716          ;; This is needed for some tests.
 717          (add-before 'check 'set-up-home
 718            (lambda* _ (setenv "HOME" "/tmp") #t))
 719          (add-before 'check 'remove-network-tests
 720            (lambda* _
 721              ;; Remove tests requiring a network connection
 722              (let ((network-tests '("tests/test_upload.py"
 723                                     "tests/test_authorizations.py"
 724                                     "tests/test_login.py"
 725                                     "tests/test_whoami.py"
 726                                     "utils/notebook/tests/test_data_uri.py"
 727                                     "utils/notebook/tests/test_base.py"
 728                                     "utils/notebook/tests/test_downloader.py"
 729                                     "inspect_package/tests/test_conda.py")))
 730                (with-directory-excursion "binstar_client"
 731                  (for-each delete-file network-tests)))
 732              #t)))))
 733     (home-page "https://github.com/Anaconda-Platform/anaconda-client")
 734     (synopsis "Anaconda Cloud command line client library")
 735     (description
 736      "Anaconda Cloud command line client library provides an interface to
 737 Anaconda Cloud.  Anaconda Cloud is useful for sharing packages, notebooks and
 738 environments.")
 739     (license license:bsd-3)))
 740
 741 (define-public python2-anaconda-client
 742   (package-with-python2 python-anaconda-client))
 743
 744 (define-public python-conda-package-handling
 745   (package
 746     (name "python-conda-package-handling")
 747     (version "1.6.0")
 748     (source
 749      (origin
 750        (method git-fetch)
 751        (uri (git-reference
 752              (url "https://github.com/conda/conda-package-handling/")
 753              (commit version)))
 754        (file-name (git-file-name name version))
 755        (sha256
 756         (base32
 757          "0bqbs6a8jbjmbn47n5n1p529cx7pf4vgfnhqca9mflgidfb5i0jf"))))
 758     (build-system python-build-system)
 759     (arguments
 760      `(#:phases
 761        (modify-phases %standard-phases
 762          (add-after 'unpack 'use-unmodified-libarchive
 763            (lambda _
 764              (substitute* "setup.py"
 765                (("archive_and_deps") "archive"))
 766              #t))
 767          (replace 'check
 768            (lambda* (#:key inputs outputs #:allow-other-keys)
 769              (add-installed-pythonpath inputs outputs)
 770              (invoke "pytest" "-vv" "tests"
 771                      "-k"
 772                      (string-append
 773                       ;; TODO: these three fail because the mocker fixture
 774                       ;; cannot be found
 775                       "not test_rename_to_trash"
 776                       " and not test_api_extract_tarball_with_libarchive_import_error"
 777                       " and not test_delete_trash"
 778                       ;; TODO: this one does not raise an exception when it
 779                       ;; should.
 780                       " and not test_secure_refusal_to_extract_abs_paths")))))))
 781     (propagated-inputs
 782      `(("python-six" ,python-six)
 783        ("python-tqdm" ,python-tqdm)))
 784     (inputs
 785      `(("libarchive" ,libarchive)))
 786     (native-inputs
 787      `(("python-cython" ,python-cython)
 788        ("python-pytest" ,python-pytest)
 789        ("python-pytest-cov" ,python-pytest-cov)
 790        ("python-mock" ,python-mock)))
 791     (home-page "https://conda.io")
 792     (synopsis "Create and extract conda packages of various formats")
 793     (description
 794      "This library is an abstraction of Conda package handling and a tool for
 795 extracting, creating, and converting between formats.")
 796     (license license:bsd-3)))
 797
 798 (define-public conda
 799   (package
 800     (name "conda")
 801     (version "4.8.3")
 802     (source
 803      (origin
 804        (method git-fetch)
 805        (uri (git-reference
 806               (url "https://github.com/conda/conda")
 807               (commit version)))
 808        (file-name (git-file-name name version))
 809        (sha256
 810         (base32
 811          "0iv1qzk21jsk6vdp3106xvpvl68zgfdqb3kyzpya87jhkl204l7r"))))
 812     (build-system python-build-system)
 813     (arguments
 814      `(#:phases
 815        (modify-phases %standard-phases
 816          (add-after 'unpack 'fix-permissions
 817            (lambda _
 818              ;; This file is no longer writable after downloading with
 819              ;; 'git-fetch'
 820              (make-file-writable
 821               "tests/conda_env/support/saved-env/environment.yml")
 822              #t))
 823          (add-after 'unpack 'correct-python-executable-name
 824            (lambda* (#:key inputs #:allow-other-keys)
 825              (let ((python (assoc-ref inputs "python-wrapper")))
 826                #;
 827                (substitute* "conda/common/path.py"
 828                  (("python_version or ''")
 829                   "python_version or '3'"))
 830                (substitute* "conda/core/initialize.py"
 831                  (("python_exe = join")
 832                   (format #f "python_exe = \"~a/bin/python\" #"
 833                           python))))
 834              #t))
 835          (add-after 'unpack 'do-not-use-python-root-as-prefix
 836            (lambda* (#:key inputs outputs #:allow-other-keys)
 837              (let ((out (assoc-ref outputs "out"))
 838                    (python (assoc-ref inputs "python-wrapper")))
 839                (substitute* "tests/core/test_initialize.py"
 840                  (("\"\"\"\\) % conda_prefix")
 841                   (format #f "\"\"\") % \"~a\"" python))
 842                  (("CONDA_PYTHON_EXE \"%s\"' % join\\(conda_prefix")
 843                   (format #f "CONDA_PYTHON_EXE \"%s\"' % join(\"~a\""
 844                           python))
 845                  (("conda_prefix = abspath\\(sys.prefix\\)")
 846                   (format #f "conda_prefix = abspath(\"~a\")" out)))
 847                (substitute* "conda/base/context.py"
 848                  (("os.chdir\\(sys.prefix\\)")
 849                   (format #f "os.chdir(\"~a\")" out))
 850                  (("sys.prefix, '.condarc'")
 851                   (format #f "\"~a\", '.condarc'" out))
 852                  (("return abspath\\(sys.prefix\\)")
 853                   (format #f "return abspath(\"~a\")" out))
 854                  (("os.path.join\\(sys.prefix, bin_dir, exe\\)")
 855                   (format #f "\"~a/bin/conda\"" out))
 856                  (("'CONDA_EXE', sys.executable")
 857                   (format #f "'CONDA_EXE', \"~a/bin/conda\"" out))))
 858              #t))
 859          (add-before 'build 'create-version-file
 860            (lambda _
 861              (with-output-to-file "conda/.version"
 862                (lambda () (display ,version)))
 863              #t))
 864          (replace 'check
 865            (lambda _
 866              (setenv "HOME" "/tmp")
 867              (invoke "py.test" "-vv"
 868                      "-k"
 869                      (string-append
 870                       "not integration"
 871                       ;; This one reports a newer version of conda than
 872                       ;; expected.
 873                       " and not test_auto_update_conda"
 874                       ;; This fails because the output directory is not a
 875                       ;; Conda environment.
 876                       " and not test_list"
 877                       ;; This fails because we patched the default root
 878                       ;; prefix.
 879                       " and not test_default_target_is_root_prefix"
 880                       ;; TODO: I don't understand what this failure means
 881                       " and not test_PrefixData_return_value_contract"
 882                       ;; TODO: same here
 883                       " and not test_install_1"
 884                       ;; Not sure if this is really wrong.  This fails because
 885                       ;; /gnu/store/...python-conda-4.8.3/bin/python
 886                       ;; is not /gnu/store/...python-wrapper-3.8.2/bin/python
 887                       " and not test_make_entry_point"))))
 888          (add-after 'install 'init
 889            ;; This writes a whole bunch of shell initialization files to the
 890            ;; prefix directory.  Many features of conda can only be used after
 891            ;; running "conda init".
 892            (lambda* (#:key inputs outputs #:allow-other-keys)
 893              (add-installed-pythonpath inputs outputs)
 894              (setenv "HOME" "/tmp")
 895
 896              ;; "conda init" insists on using sudo, because it is hell-bent on
 897              ;; modifying system files.
 898              (mkdir-p "/tmp/fake-sudo")
 899              (with-output-to-file "/tmp/fake-sudo/sudo"
 900                (lambda () (format #t "#!~/bin/sh~%exec $@" (which "sh"))))
 901              (chmod "/tmp/fake-sudo/sudo" #o700)
 902              (setenv "PATH" (string-append "/tmp/fake-sudo:"
 903                                            (getenv "PATH")))
 904
 905              (invoke (string-append (assoc-ref outputs "out")
 906                                     "/bin/conda")
 907                      "init"))))))
 908     (inputs
 909      `(("python-wrapper" ,python-wrapper)))
 910     (propagated-inputs
 911      `(("python-anaconda-client" ,python-anaconda-client)
 912        ("python-conda-package-handling" ,python-conda-package-handling)
 913        ("python-cytoolz" ,python-cytoolz)
 914        ("python-pycosat" ,python-pycosat)
 915        ("python-pytest" ,python-pytest)
 916        ("python-pyyaml" ,python-pyyaml)
 917        ("python-requests" ,python-requests)
 918        ("python-responses" ,python-responses)
 919        ("python-ruamel.yaml" ,python-ruamel.yaml)
 920        ("python-tqdm" ,python-tqdm)
 921        ;; XXX: This is dragged in by libarchive and is needed at runtime.
 922        ("zstd" ,zstd)))
 923     (home-page "https://github.com/conda/conda")
 924     (synopsis "Cross-platform, OS-agnostic, system-level binary package manager")
 925     (description
 926      "Conda is a cross-platform, Python-agnostic binary package manager.  It
 927 is the package manager used by Anaconda installations, but it may be used for
 928 other systems as well.  Conda makes environments first-class citizens, making
 929 it easy to create independent environments even for C libraries.  Conda is
 930 written entirely in Python.")
 931     (license license:bsd-3)))
 932
 933 (define-public python-conda
 934   (deprecated-package "python-conda" conda))
 935
 936 (define-public gwl
 937   (package
 938     (name "gwl")
 939     (version "0.2.1")
 940     (source (origin
 941               (method url-fetch)
 942               (uri (string-append "mirror://gnu/gwl/gwl-" version ".tar.gz"))
 943               (sha256
 944                (base32
 945                 "1ji5jvzni8aml9fmimlr11g3k8isrnlvnbzhmwgdjh72hils0alc"))))
 946     (build-system gnu-build-system)
 947     (arguments
 948      `(#:phases
 949        (modify-phases %standard-phases
 950          (add-before 'build 'fix-tests
 951            (lambda _
 952              ;; Avoid cross-device link.
 953              (substitute* "tests/cache.scm"
 954                (("/tmp/gwl-test-input-XXXXXX")
 955                 (string-append (getcwd) "/gwl-test-input-XXXXXX")))
 956              #t)))))
 957     (native-inputs
 958      `(("autoconf" ,autoconf)
 959        ("automake" ,automake)
 960        ("pkg-config" ,pkg-config)
 961        ("texinfo" ,texinfo)
 962        ("graphviz" ,graphviz)))
 963     (inputs
 964      `(("guile" ,@(assoc-ref (package-native-inputs guix) "guile"))))
 965     (propagated-inputs
 966      `(("guix" ,guix)
 967        ("guile-commonmark" ,guile-commonmark)
 968        ("guile-gcrypt" ,guile-gcrypt)
 969        ("guile-pfds" ,guile-pfds)
 970        ("guile-syntax-highlight" ,guile-syntax-highlight)
 971        ("guile-wisp" ,guile-wisp)))
 972     (home-page "https://workflows.guix.info")
 973     (synopsis "Workflow management extension for GNU Guix")
 974     (description "The @dfn{Guix Workflow Language} (GWL) provides an
 975 extension to GNU Guix's declarative language for package management to
 976 automate the execution of programs in scientific workflows.  The GWL
 977 can use process engines to integrate with various computing
 978 environments.")
 979     ;; The Scheme modules in guix/ and gnu/ are licensed GPL3+,
 980     ;; the web interface modules in gwl/ are licensed AGPL3+,
 981     ;; and the fonts included in this package are licensed OFL1.1.
 982     (license (list license:gpl3+ license:agpl3+ license:silofl1.1))))
 983
 984 (define-public guix-jupyter
 985   (package
 986     (name "guix-jupyter")
 987     (version "0.1.0")
 988     (home-page "https://gitlab.inria.fr/guix-hpc/guix-kernel")
 989     (source (origin
 990               (method git-fetch)
 991               (uri (git-reference (url home-page)
 992                                   (commit (string-append "v" version))))
 993               (sha256
 994                (base32
 995                 "01z7jjkc7r7lj6637rcgpz40v8xqqyfp6871h94yvcnwm7zy9h1n"))
 996               (modules '((guix build utils)))
 997               (snippet
 998                '(begin
 999                   ;; Allow builds with Guile 3.0.
1000                   (substitute* "configure.ac"
1001                     (("^GUILE_PKG.*")
1002                      "GUILE_PKG([3.0 2.2])\n"))
1003
1004                   ;; Avoid name clash and build failure now that
1005                   ;; 'define-json-mapping' is also provided by Guile-JSON, as
1006                   ;; of version 4.3.
1007                   (substitute* (find-files "." "\\.scm$")
1008                     (("define-json-mapping")
1009                      "define-json-mapping*")
1010                     (("<=>")
1011                      "<->"))
1012                   #t))
1013               (file-name (string-append "guix-jupyter-" version "-checkout"))))
1014     (build-system gnu-build-system)
1015     (arguments
1016      `(#:modules ((srfi srfi-26)
1017                   (ice-9 match)
1018                   (ice-9 popen)
1019                   (ice-9 rdelim)
1020                   (guix build utils)
1021                   (guix build gnu-build-system))
1022        #:phases
1023        (modify-phases %standard-phases
1024          (add-after 'install 'sed-kernel-json
1025            (lambda* (#:key inputs outputs #:allow-other-keys)
1026              (let* ((out   (assoc-ref outputs "out"))
1027                     (guix  (assoc-ref inputs  "guix"))
1028                     (guile (assoc-ref inputs  "guile"))
1029                     (json  (assoc-ref inputs  "guile-json"))
1030                     (git   (assoc-ref inputs  "guile-git"))
1031                     (bs    (assoc-ref inputs  "guile-bytestructures"))
1032                     (s-zmq (assoc-ref inputs  "guile-simple-zmq"))
1033                     (gcrypt (assoc-ref inputs  "guile-gcrypt"))
1034                     (deps  (list out s-zmq guix json git bs gcrypt))
1035                     (effective
1036                      (read-line
1037                       (open-pipe* OPEN_READ
1038                                   (string-append guile "/bin/guile")
1039                                   "-c" "(display (effective-version))")))
1040                     (path (map (cut string-append "-L\", \"" <>
1041                                     "/share/guile/site/"
1042                                     effective)
1043                                deps))
1044                     (gopath (map (cut string-append "-C\", \"" <>
1045                                       "/lib/guile/" effective
1046                                       "/site-ccache")
1047                                  deps))
1048                     (kernel-dir (string-append out "/share/jupyter/kernels/guix/")))
1049                (substitute* (string-append kernel-dir "kernel.json")
1050                  (("-s")
1051                   (string-join
1052                    (list (string-join path "\",\n\t\t\"")
1053                          (string-join gopath "\",\n\t\t\"")
1054                          "-s")
1055                    "\",\n\t\t\""))
1056                  (("guix-jupyter-kernel.scm")
1057                   (string-append out "/share/guile/site/3.0/"
1058                                  "guix-jupyter-kernel.scm")))
1059                #t))))))
1060     (native-inputs
1061      `(("autoconf" ,autoconf)
1062        ("automake" ,automake)
1063        ("pkg-config" ,pkg-config)
1064
1065        ;; For testing.
1066        ("jupyter" ,jupyter)
1067        ("python-ipython" ,python-ipython)
1068        ("python-ipykernel" ,python-ipykernel)))
1069     (inputs
1070      `(("guix" ,guix)
1071        ("guile" ,@(assoc-ref (package-native-inputs guix) "guile"))))
1072     (propagated-inputs
1073      `(("guile-json" ,guile-json-4)
1074        ("guile-simple-zmq" ,guile-simple-zmq)
1075        ("guile-gcrypt" ,guile-gcrypt)))
1076     (synopsis "Guix kernel for Jupyter")
1077     (description
1078      "Guix-Jupyter is a Jupyter kernel.  It allows you to annotate notebooks
1079 with information about their software dependencies, such that code is executed
1080 in the right software environment.  Guix-Jupyter spawns the actual kernels
1081 such as @code{python-ipykernel} on behalf of the notebook user and runs them
1082 in an isolated environment, in separate namespaces.")
1083     (license license:gpl3+)))
1084
1085 (define-public gcab
1086   (package
1087     (name "gcab")
1088     (version "1.4")
1089     (source (origin
1090               (method url-fetch)
1091               (uri (string-append "mirror://gnome/sources/gcab/"
1092                                   version "/gcab-" version ".tar.xz"))
1093               (sha256
1094                (base32
1095                 "13q43iqld4l50yra45lhvkd376pn6qpk7rkx374zn8y9wsdzm9b7"))))
1096     (build-system meson-build-system)
1097     (native-inputs
1098      `(("glib:bin" ,glib "bin")         ; for glib-mkenums
1099        ("intltool" ,intltool)
1100        ("pkg-config" ,pkg-config)
1101        ("vala" ,vala)))
1102     (inputs
1103      `(("glib" ,glib)
1104        ("zlib" ,zlib)))
1105     (arguments
1106      `(#:configure-flags
1107        ;; XXX This ‘documentation’ is for developers, and fails informatively:
1108        ;; Error in gtkdoc helper script: 'gtkdoc-mkhtml' failed with status 5
1109        (list "-Ddocs=false"
1110              "-Dintrospection=false")))
1111     (home-page "https://wiki.gnome.org/msitools") ; no dedicated home page
1112     (synopsis "Microsoft Cabinet file manipulation library")
1113     (description
1114      "The libgcab library provides GObject functions to read, write, and modify
1115 Microsoft cabinet (.@dfn{CAB}) files.")
1116     (license (list license:gpl2+        ; tests/testsuite.at
1117                    license:lgpl2.1+)))) ; the rest
1118
1119 (define-public msitools
1120   (package
1121     (name "msitools")
1122     (version "0.100")
1123     (source (origin
1124               (method url-fetch)
1125               (uri (string-append "mirror://gnome/sources/msitools/"
1126                                   version "/msitools-" version ".tar.xz"))
1127               (sha256
1128                (base32
1129                 "1skq17qr2ic4qr3779j49byfm8rncwbsq9rj1a33ncn2m7isdwdv"))))
1130     (build-system gnu-build-system)
1131     (native-inputs
1132      `(("bison" ,bison)
1133        ("pkg-config" ,pkg-config)))
1134     (inputs
1135      `(("gcab" ,gcab)
1136        ("glib" ,glib)
1137        ("libgsf" ,libgsf)
1138        ("libxml2" ,libxml2)
1139        ("uuid" ,util-linux "lib")))
1140     (home-page "https://wiki.gnome.org/msitools")
1141     (synopsis "Windows Installer file manipulation tool")
1142     (description
1143      "msitools is a collection of command-line tools to inspect, extract, build,
1144 and sign Windows@tie{}Installer (.@dfn{MSI}) files.  It aims to be a solution
1145 for packaging and deployment of cross-compiled Windows applications.")
1146     (license license:lgpl2.1+)))
1147
1148 (define-public libostree
1149   (package
1150     (name "libostree")
1151     (version "2020.6")
1152     (source
1153      (origin
1154        (method url-fetch)
1155        (uri (string-append
1156              "https://github.com/ostreedev/ostree/releases/download/v"
1157              (version-major+minor version) "/libostree-" version ".tar.xz"))
1158        (sha256
1159         (base32 "0wk9fgj9jl25ns2hcgcb6j24k5mvfn13b02ka0p8l4hdh8c4hpc6"))))
1160     (build-system gnu-build-system)
1161     (arguments
1162      '(#:phases
1163        (modify-phases %standard-phases
1164          (add-before 'check 'pre-check
1165            (lambda _
1166              ;; Don't try to use the non-existing '/var/tmp' as test
1167              ;; directory.
1168              (setenv "TEST_TMPDIR" (getenv "TMPDIR"))
1169              #t)))
1170        ;; XXX: fails with:
1171        ;;     tap-driver.sh: missing test plan
1172        ;;     tap-driver.sh: internal error getting exit status
1173        ;;     tap-driver.sh: fatal: I/O or internal error
1174        #:tests? #f))
1175     (native-inputs
1176      `(("attr" ,attr)                   ; for tests
1177        ("bison" ,bison)
1178        ("glib:bin" ,glib "bin")         ; for 'glib-mkenums'
1179        ("gobject-introspection" ,gobject-introspection)
1180        ("pkg-config" ,pkg-config)
1181        ("xsltproc" ,libxslt)))
1182     (inputs
1183      `(("avahi" ,avahi)
1184        ("docbook-xml" ,docbook-xml-4.2)
1185        ("docbook-xsl" ,docbook-xsl)
1186        ("e2fsprogs" ,e2fsprogs)
1187        ("fuse" ,fuse)
1188        ("glib" ,glib)
1189        ("gpgme" ,gpgme)
1190        ("libarchive" ,libarchive)
1191        ("libsoup" ,libsoup)
1192        ("util-linux" ,util-linux)))
1193     (home-page "https://ostree.readthedocs.io/en/latest/")
1194     (synopsis "Operating system and container binary deployment and upgrades")
1195     (description
1196      "@code{libostree} is both a shared library and suite of command line
1197 tools that combines a \"git-like\" model for committing and downloading
1198 bootable file system trees, along with a layer for deploying them and managing
1199 the boot loader configuration.")
1200     (license license:lgpl2.0+)))
1201
1202 (define-public flatpak
1203   (package
1204    (name "flatpak")
1205    (version "1.8.2")
1206    (source
1207     (origin
1208      (method url-fetch)
1209      (uri (string-append "https://github.com/flatpak/flatpak/releases/download/"
1210                          version "/flatpak-" version ".tar.xz"))
1211      (sha256
1212       (base32 "1c45a0k7wx685n5b3ihv7dk0mm2kmwbw7cx8w5g2la62yxfn49kr"))))
1213
1214    ;; Wrap 'flatpak' so that GIO_EXTRA_MODULES is set, thereby allowing GIO to
1215    ;; find the TLS backend in glib-networking.
1216    (build-system glib-or-gtk-build-system)
1217
1218    (arguments
1219     '(#:configure-flags
1220       (list
1221        "--enable-documentation=no" ;; FIXME
1222        "--enable-system-helper=no"
1223        "--localstatedir=/var"
1224        (string-append "--with-system-bubblewrap="
1225                       (assoc-ref %build-inputs "bubblewrap")
1226                       "/bin/bwrap")
1227        (string-append "--with-system-dbus-proxy="
1228                       (assoc-ref %build-inputs "xdg-dbus-proxy")
1229                       "/bin/xdg-dbus-proxy"))
1230       #:phases
1231       (modify-phases %standard-phases
1232         (add-after 'unpack 'fix-tests
1233           (lambda* (#:key inputs #:allow-other-keys)
1234             (copy-recursively
1235              (string-append (assoc-ref inputs "glibc-utf8-locales")
1236                             "/lib/locale/") "/tmp/locale")
1237             (for-each make-file-writable (find-files "/tmp"))
1238             (substitute* "tests/make-test-runtime.sh"
1239               (("cp `which.*") "echo guix\n")
1240               (("cp -r /usr/lib/locale/C\\.\\*")
1241                (string-append "mkdir ${DIR}/usr/lib/locale/en_US; \
1242 cp -r /tmp/locale/*/en_US.*")))
1243             (substitute* "tests/libtest.sh"
1244               (("/bin/kill") (which "kill"))
1245               (("/usr/bin/python3") (which "python3")))
1246             #t))
1247         ;; Many tests fail for unknown reasons, so we just run a few basic
1248         ;; tests.
1249         (replace 'check
1250           (lambda _
1251             (setenv "HOME" "/tmp")
1252             (invoke "make" "check"
1253                     "TESTS=tests/test-basic.sh tests/test-config.sh testcommon"))))))
1254     (native-inputs
1255     `(("bison" ,bison)
1256       ("dbus" ,dbus) ; for dbus-daemon
1257       ("gettext" ,gettext-minimal)
1258       ("glib:bin" ,glib "bin")          ; for glib-mkenums + gdbus-codegen
1259       ("glibc-utf8-locales" ,glibc-utf8-locales)
1260       ("gobject-introspection" ,gobject-introspection)
1261       ("libcap" ,libcap)
1262       ("pkg-config" ,pkg-config)
1263       ("python" ,python)
1264       ("python-pyparsing" ,python-pyparsing)
1265       ("socat" ,socat)
1266       ("which" ,which)))
1267    (propagated-inputs `(("glib-networking" ,glib-networking)
1268                         ("gnupg" ,gnupg)
1269                         ("gsettings-desktop-schemas"
1270                          ,gsettings-desktop-schemas)))
1271    (inputs
1272     `(("appstream-glib" ,appstream-glib)
1273       ("bubblewrap" ,bubblewrap)
1274       ("dconf" ,dconf)
1275       ("fuse" ,fuse)
1276       ("gdk-pixbuf" ,gdk-pixbuf)
1277       ("gpgme" ,gpgme)
1278       ("json-glib" ,json-glib)
1279       ("libarchive" ,libarchive)
1280       ("libostree" ,libostree)
1281       ("libseccomp" ,libseccomp)
1282       ("libsoup" ,libsoup)
1283       ("libxau" ,libxau)
1284       ("libxml2" ,libxml2)
1285       ("util-linux" ,util-linux)
1286       ("xdg-dbus-proxy" ,xdg-dbus-proxy)))
1287    (home-page "https://flatpak.org")
1288    (synopsis "System for building, distributing, and running sandboxed desktop
1289 applications")
1290    (description "Flatpak is a system for building, distributing, and running
1291 sandboxed desktop applications on GNU/Linux.")
1292    (license license:lgpl2.1+)))
1293
1294 (define-public akku
1295   (package
1296     (name "akku")
1297     (version "1.0.1")
1298     (source (origin
1299               (method git-fetch)
1300               (uri (git-reference
1301                     (url "https://gitlab.com/akkuscm/akku.git")
1302                     (commit (string-append "v" version))))
1303               (file-name (git-file-name name version))
1304               (sha256 (base32 "1dm32ws3nshnnscd7k75zswxxs1pp25y2q4k8j5ms241hz47by3c"))))
1305     (build-system gnu-build-system)
1306     (arguments
1307      '(#:phases (modify-phases %standard-phases
1308                   (replace 'bootstrap
1309                     (lambda* (#:key outputs #:allow-other-keys)
1310                       (for-each patch-shebang
1311                                 '("bootstrap"
1312                                   ".akku/env"))
1313                       (let* ((home "/tmp")
1314                              (datadir (string-append home "/.local/share/akku/")))
1315                         (mkdir-p datadir)
1316                         (invoke "touch" (string-append datadir "index.db"))
1317                         (setenv "HOME" home))
1318                       (invoke "./bootstrap")
1319                       #t))
1320                   (add-after 'install 'wrap-executables
1321                     (lambda* (#:key outputs inputs #:allow-other-keys)
1322                       (let ((out (assoc-ref outputs "out"))
1323                             (curl (assoc-ref inputs "curl")))
1324                         (wrap-program (string-append out "/bin/akku")
1325                           `("LD_LIBRARY_PATH" ":" prefix (,(string-append curl "/lib"))))
1326                         #t))))))
1327     (native-inputs
1328      `(("which" ,which)
1329        ("autoconf" ,autoconf)
1330        ("automake" ,automake)
1331        ("pkg-config" ,pkg-config)))
1332     (inputs
1333      `(("guile" ,guile-3.0)
1334        ("curl" ,curl)))
1335     (home-page "https://akkuscm.org/")
1336     (synopsis "Language package manager for Scheme")
1337     (description
1338      "Akku.scm is a project-based language package manager for R6RS and R7RS Scheme.
1339 It is mainly meant for programmers who develop portable programs or libraries in Scheme,
1340 but could potentially work for end-users of those programs.  It also has a translator
1341 from R7RS, which allows most R7RS code to run on R6RS implementations.")
1342     (license license:gpl3+)))