gnu/packages/rdf.scm

   1 ;;; GNU Guix --- Functional package management for GNU
   2 ;;; Copyright © 2013, 2014, 2015 Andreas Enge <andreas@enge.fr>
   3 ;;; Copyright © 2015, 2016, 2018 Ricardo Wurmus <rekado@elephly.net>
   4 ;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
   5 ;;; Copyright © 2019 Julien Lepiller <julien@lepiller.eu>
   6 ;;; Copyright © 2020 Alexandros Theodotou <alex@zrythm.org>
   7 ;;; Copyright © 2020 Pjotr Prins <pjotr.guix@thebird.nl>
   8 ;;; Copyright © 2020 Efraim Flashner <efraim@flashner.co.il>
   9 ;;; Copyright © 2020 pukkamustard <pukkamustard@posteo.net>
  10 ;;;
  11 ;;; This file is part of GNU Guix.
  12 ;;;
  13 ;;; GNU Guix is free software; you can redistribute it and/or modify it
  14 ;;; under the terms of the GNU General Public License as published by
  15 ;;; the Free Software Foundation; either version 3 of the License, or (at
  16 ;;; your option) any later version.
  17 ;;;
  18 ;;; GNU Guix is distributed in the hope that it will be useful, but
  19 ;;; WITHOUT ANY WARRANTY; without even the implied warranty of
  20 ;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  21 ;;; GNU General Public License for more details.
  22 ;;;
  23 ;;; You should have received a copy of the GNU General Public License
  24 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
  25
  26 (define-module (gnu packages rdf)
  27   #:use-module ((guix licenses) #:prefix license:)
  28   #:use-module (guix packages)
  29   #:use-module (guix git-download)
  30   #:use-module (guix download)
  31   #:use-module (guix build-system cmake)
  32   #:use-module (guix build-system gnu)
  33   #:use-module (guix build-system python)
  34   #:use-module (guix build-system waf)
  35   #:use-module (gnu packages)
  36   #:use-module (gnu packages autotools)
  37   #:use-module (gnu packages boost)
  38   #:use-module (gnu packages check)
  39   #:use-module (gnu packages compression)
  40   #:use-module (gnu packages curl)
  41   #:use-module (gnu packages cyrus-sasl)
  42   #:use-module (gnu packages documentation)
  43   #:use-module (gnu packages dbm)
  44   #:use-module (gnu packages gnupg)
  45   #:use-module (gnu packages linux)
  46   #:use-module (gnu packages multiprecision)
  47   #:use-module (gnu packages pcre)
  48   #:use-module (gnu packages perl)
  49   #:use-module (gnu packages pkg-config)
  50   #:use-module (gnu packages python)
  51   #:use-module (gnu packages python-web)
  52   #:use-module (gnu packages python-xyz)
  53   #:use-module (gnu packages qt)
  54   #:use-module (gnu packages time)
  55   #:use-module (gnu packages tls)
  56   #:use-module (gnu packages xml))
  57
  58 (define-public raptor2
  59   (package
  60     (name "raptor2")
  61     (version "2.0.15")
  62     (source (origin
  63              (method url-fetch)
  64              (uri (string-append "https://download.librdf.org/source/" name
  65                                  "-" version ".tar.gz"))
  66              (patches
  67               (search-patches "raptor2-heap-overflow.patch"))
  68              (sha256
  69               (base32
  70                "1vc02im4mpc28zxzgli68k6j0dakh0k3s389bm436yvqajxg19xd"))))
  71     (build-system gnu-build-system)
  72     (inputs
  73      `(("curl" ,curl)
  74        ("libxml2" ,libxml2)
  75        ("libxslt" ,libxslt)
  76        ("zlib" ,zlib)))
  77     (arguments
  78      `(#:parallel-tests? #f))
  79     (home-page "https://librdf.org/raptor/")
  80     (synopsis "RDF syntax library")
  81     (description "Raptor is a C library providing a set of parsers and
  82 serialisers that generate Resource Description Framework (RDF) triples
  83 by parsing syntaxes or serialise the triples into a syntax.  The supported
  84 parsing syntaxes are RDF/XML, N-Quads, N-Triples 1.0 and 1.1, TRiG,
  85 Turtle 2008 and 2013, RDFa 1.0 and 1.1, RSS tag soup including all versions
  86 of RSS, Atom 1.0 and 0.3, GRDDL and microformats for HTML, XHTML and
  87 XML.  The serialising syntaxes are RDF/XML (regular, abbreviated, XMP),
  88 Turtle 2013, N-Quads, N-Triples 1.1, Atom 1.0, RSS 1.0, GraphViz DOT,
  89 HTML and JSON.")
  90     (license license:lgpl2.1+))) ; or any choice of gpl2+ or asl2.0
  91
  92 (define-public clucene
  93   (package
  94     (name "clucene")
  95     (version "2.3.3.4")
  96     (source (origin
  97              (method url-fetch)
  98              (uri (string-append "mirror://sourceforge/clucene/"
  99                                  "clucene-core-unstable/2.3/clucene-core-"
 100                                  version ".tar.gz"))
 101              (sha256
 102               (base32
 103                "1arffdwivig88kkx685pldr784njm0249k0rb1f1plwavlrw9zfx"))
 104              (patches (search-patches "clucene-pkgconfig.patch"
 105                                       "clucene-contribs-lib.patch"))))
 106     (build-system cmake-build-system)
 107     (inputs
 108      `(("boost" ,boost) ; could also use bundled copy
 109        ("zlib" ,zlib)))
 110     (arguments
 111      `(#:test-target "cl_test"
 112        #:configure-flags '("-DBUILD_CONTRIBS_LIB=ON")
 113        #:tests? #f)) ; Tests do not compile, as TestIndexSearcher.cpp uses
 114                      ; undeclared usleep. After fixing this, one needs to run
 115                      ; "make test" in addition to "make cl_test", then
 116                      ; SimpleTest fails.
 117                      ; Notice that the library appears to be unmaintained
 118                      ; with no reaction to bug reports.
 119     (home-page "http://clucene.sourceforge.net/")
 120     (synopsis "C text indexing and searching library")
 121     (description "CLucene is a high-performance, scalable, cross platform,
 122 full-featured indexing and searching API.  It is a port of the very popular
 123 Java Lucene text search engine API to C++.")
 124     (license license:lgpl2.1)))
 125
 126 (define-public lucene++
 127   (package
 128     (name "lucene++")
 129     (version "3.0.7")
 130     (source (origin
 131               (method git-fetch)
 132               (uri (git-reference
 133                      (url "https://github.com/luceneplusplus/LucenePlusPlus")
 134                      (commit (string-append "rel_" version))))
 135               (file-name (git-file-name name version))
 136               (sha256
 137                (base32
 138                 "06b37fly6l27zc6kbm93f6khfsv61w792j8xihfagpcm9cfz2zi1"))))
 139     (build-system cmake-build-system)
 140     (arguments
 141      `(#:configure-flags
 142        ;; CXX_FLAGS suggested in a closed issue on github:
 143        ;; https://github.com/luceneplusplus/LucenePlusPlus/issues/100
 144        (list "-Wno-dev" "-DCMAKE_CXX_FLAGS=-DBOOST_VARIANT_USE_RELAXED_GET_BY_DEFAULT"
 145              ;; Install in lib64 break rpath
 146              "-DCMAKE_INSTALL_LIBDIR:PATH=lib")))
 147     (native-inputs
 148      `(("pkg-config" ,pkg-config)))
 149     (inputs
 150      `(("boost" ,boost)))
 151     (home-page "https://github.com/luceneplusplus/LucenePlusPlus")
 152     (synopsis "Text search engine")
 153     (description "Lucene++ is an up to date C++ port of the popular Java
 154 Lucene library, a high-performance, full-featured text search engine.")
 155     (license (list license:asl2.0 license:lgpl3+)))); either asl or lgpl.
 156
 157 (define-public lrdf
 158   (package
 159     (name "lrdf")
 160     (version "0.6.1")
 161     (source (origin
 162               (method git-fetch)
 163               (uri (git-reference
 164                     (url "https://github.com/swh/LRDF")
 165                     (commit (string-append "v" version))))
 166               (file-name (git-file-name name version))
 167               (sha256
 168                (base32
 169                 "00wzkfb8y0aqd519ypz067cq099dpc89w69zw8ln39vl6f9x2pd4"))))
 170     (build-system gnu-build-system)
 171     (arguments
 172      '(#:phases
 173        (modify-phases %standard-phases
 174          (add-after 'unpack 'remove-out-of-tree-references
 175            (lambda _
 176              ;; remove_test depends on an out-of-tree RDF file
 177              (substitute* "examples/Makefile.am"
 178                (("instances_test remove_test") "instances_test")
 179                (("\\$\\(TESTS\\) remove_test") "$(TESTS)"))
 180              #t))
 181          ;; The default bootstrap phase executes autogen.sh, which fails.
 182          (replace 'bootstrap
 183            (lambda _ (invoke "autoreconf" "-vif") #t)))))
 184     (inputs
 185      `(("raptor" ,raptor2)
 186        ("cyrus-sasl" ,cyrus-sasl)
 187        ("zlib" ,zlib)))
 188     (native-inputs
 189      `(("autoconf" ,autoconf)
 190        ("automake" ,automake)
 191        ("libtool" ,libtool)
 192        ("pkg-config" ,pkg-config)))
 193     (home-page "https://github.com/swh/LRDF")
 194     (synopsis "Lightweight RDF library for accessing LADSPA plugin metadata")
 195     (description
 196      "LRDF is a library to make it easy to manipulate RDF files describing
 197 LADSPA plugins.  It can also be used for general RDF manipulation.  It can
 198 read RDF/XLM and N3 files and export N3 files, and it also has a light
 199 taxonomic inference capability.")
 200     (license license:gpl2)))
 201
 202 (define-public rasqal
 203   (package
 204     (name "rasqal")
 205     (version "0.9.33")
 206     (source (origin
 207              (method url-fetch)
 208              (uri (string-append "http://download.librdf.org/source/" name
 209                                  "-" version ".tar.gz"))
 210              (sha256
 211               (base32
 212                "0z6rrwn4jsagvarg8d5zf0j352kjgi33py39jqd29gbhcnncj939"))))
 213     (build-system gnu-build-system)
 214     (native-inputs
 215      `(("perl" ,perl)
 216        ("perl-xml-dom" ,perl-xml-dom) ; for the tests
 217        ("pkg-config" ,pkg-config)))
 218     (inputs
 219      `(("libgcrypt" ,libgcrypt)
 220        ("libxml2" ,libxml2)
 221        ("mpfr" ,mpfr)
 222        ("pcre" ,pcre)
 223        ("util-linux" ,util-linux "lib")))
 224     (propagated-inputs
 225      `(("raptor2" ,raptor2))) ; stipulated by rasqal.pc
 226     (arguments
 227      `(#:parallel-tests? #f
 228        ; test failure reported upstream, see
 229        ; http://bugs.librdf.org/mantis/view.php?id=571
 230        #:tests? #f))
 231     (home-page "http://librdf.org/rasqal/")
 232     (synopsis "RDF query library")
 233     (description "Rasqal is a C library that handles Resource Description
 234 Framework (RDF) query language syntaxes, query construction and execution
 235 of queries returning results as bindings, boolean, RDF graphs/triples or
 236 syntaxes.  The supported query languages are SPARQL Query 1.0,
 237 SPARQL Query 1.1, SPARQL Update 1.1 (no executing) and the Experimental
 238 SPARQL extensions (LAQRS).  Rasqal can write binding query results in the
 239 SPARQL XML, SPARQL JSON, CSV, TSV, HTML, ASCII tables, RDF/XML and
 240 Turtle/N3 and read them in SPARQL XML, RDF/XML and Turtle/N3.")
 241     (license license:lgpl2.1+))) ; or any choice of gpl2+ or asl2.0
 242
 243 (define-public redland
 244   (package
 245     (name "redland")
 246     (version "1.0.17")
 247     (source (origin
 248              (method url-fetch)
 249              (uri (string-append "http://download.librdf.org/source/" name
 250                                  "-" version ".tar.gz"))
 251              (sha256
 252               (base32
 253                "109n0kp39p966dpiasad2bb7q66rwbcb9avjvimw28chnpvlf66y"))))
 254     (build-system gnu-build-system)
 255     (native-inputs
 256      `(("perl" ,perl) ; needed for installation
 257        ("pkg-config" ,pkg-config)))
 258     (propagated-inputs
 259      `(("rasqal" ,rasqal))) ; in Requires.private field of .pc
 260     (inputs
 261      `(("bdb" ,bdb)))
 262     (home-page "http://librdf.org/")
 263     (synopsis "RDF library")
 264     (description "The Redland RDF Library (librdf) provides the RDF API
 265 and triple stores.")
 266     (license license:lgpl2.1+))) ; or any choice of gpl2+ or asl2.0
 267
 268 (define-public serd
 269   (package
 270     (name "serd")
 271     (version "0.30.8")
 272     (source (origin
 273              (method url-fetch)
 274              (uri (string-append "https://download.drobilla.net/serd-"
 275                                  version ".tar.bz2"))
 276              (sha256
 277               (base32
 278                "11zs53yx40mv62vxsl15mvdh7s17y5v6lgcgahdvzxgnan7w8bk7"))))
 279     (build-system waf-build-system)
 280     (arguments
 281      `(#:tests? #f                      ; no check target
 282        #:phases
 283        (modify-phases %standard-phases
 284          (add-before
 285           'configure 'set-ldflags
 286           (lambda* (#:key outputs #:allow-other-keys)
 287             (setenv "LDFLAGS"
 288                     (string-append "-Wl,-rpath="
 289                                    (assoc-ref outputs "out") "/lib"))
 290             #t)))))
 291     (home-page "https://drobilla.net/software/serd/")
 292     (synopsis "Library for RDF syntax supporting Turtle and NTriples")
 293     (description
 294      "Serd is a lightweight C library for RDF syntax which supports reading
 295 and writing Turtle and NTriples.  Serd is not intended to be a swiss-army
 296 knife of RDF syntax, but rather is suited to resource limited or performance
 297 critical applications (e.g. converting many gigabytes of NTriples to Turtle),
 298 or situations where a simple reader/writer with minimal dependencies is
 299 ideal (e.g. in LV2 implementations or embedded applications).")
 300     (license license:isc)))
 301
 302 (define-public sord
 303   (package
 304     (name "sord")
 305     (version "0.16.8")
 306     (source (origin
 307              (method url-fetch)
 308              (uri (string-append "https://download.drobilla.net/sord-"
 309                                  version ".tar.bz2"))
 310              (sha256
 311               (base32
 312                "052y7zllrg0bzyky2rmrrwnnf16p6bk7q40rq9mgm0mzm8p9sa3w"))))
 313     (build-system waf-build-system)
 314     (arguments
 315      `(#:tests? #f                      ; no check target
 316        #:phases
 317        (modify-phases %standard-phases
 318          (add-before
 319           'configure 'set-ldflags
 320           (lambda* (#:key outputs #:allow-other-keys)
 321             (setenv "LDFLAGS"
 322                     (string-append "-Wl,-rpath="
 323                                    (assoc-ref outputs "out") "/lib"))
 324             #t)))))
 325     (inputs
 326      `(("pcre" ,pcre)))
 327     (native-inputs
 328      `(("pkg-config" ,pkg-config)))
 329     (propagated-inputs
 330      `(("serd" ,serd)))                 ; required by sord-0.pc
 331     (home-page "https://drobilla.net/software/sord/")
 332     (synopsis "C library for storing RDF data in memory")
 333     (description
 334      "Sord is a lightweight C library for storing RDF data in memory.")
 335     (license license:isc)))
 336
 337 (define-public python-rdflib
 338   (package
 339     (name "python-rdflib")
 340     (version "4.2.2")
 341     (source
 342       (origin
 343         (method url-fetch)
 344         (uri (pypi-uri "rdflib" version))
 345         (sha256
 346          (base32
 347           "0398c714znnhaa2x7v51b269hk20iz073knq2mvmqp2ma92z27fs"))))
 348     (build-system python-build-system)
 349     (arguments
 350      '(;; FIXME: Three test failures. Should be fixed next release.
 351        #:tests? #f))
 352        ;; #:phases
 353        ;; (modify-phases %standard-phases
 354        ;;   (replace 'check
 355        ;;     (lambda _
 356        ;;       ;; Run tests from the build directory so python3 only
 357        ;;       ;; sees the installed 2to3 version.
 358        ;;       (invoke "nosetests" "--where=./build/src"))))))
 359     (native-inputs
 360      `(("python-nose" ,python-nose)))
 361     (propagated-inputs
 362       `(("python-html5lib" ,python-html5lib)
 363         ("python-isodate" ,python-isodate)
 364         ("python-pyparsing" ,python-pyparsing)))
 365     (home-page "https://github.com/RDFLib/rdflib")
 366     (synopsis "Python RDF library")
 367     (description
 368       "RDFLib is a Python library for working with RDF, a simple yet
 369 powerful language for representing information.")
 370     (license (license:non-copyleft "file://LICENSE"
 371                                    "See LICENSE in the distribution."))))
 372
 373 (define-public python2-rdflib
 374   (package-with-python2 python-rdflib))
 375
 376 (define-public python-rdflib-jsonld
 377   (package
 378     (name "python-rdflib-jsonld")
 379     (version "0.5.0")
 380     (source
 381       (origin
 382         (method url-fetch)
 383         (uri (pypi-uri "rdflib-jsonld" version))
 384         (sha256
 385          (base32
 386           "1v85f4hdlrrk0l1najmqmm79ijrvcj259kwsrrxiq1q5chr5azag"))))
 387     (build-system python-build-system)
 388     (native-inputs
 389      `(("python-nose" ,python-nose)))
 390     (propagated-inputs
 391      `(("python-rdflib" ,python-rdflib)))
 392     (home-page "https://github.com/RDFLib/rdflib-jsonld")
 393     (synopsis "rdflib extension adding JSON-LD parser and serializer")
 394     (description "This package provides an rdflib extension adding JSON-LD
 395 parser and serializer.")
 396     (license license:bsd-3)))
 397
 398 (define-public python-cfgraph
 399   (package
 400     (name "python-cfgraph")
 401     (version "0.2.1")
 402     (source
 403       (origin
 404         (method url-fetch)
 405         (uri (pypi-uri "CFGraph" version))
 406         (sha256
 407          (base32
 408           "0x7yz0lvqb6mkhl5fbml27sppmscgpf8v2ism9jzzf0h982ffzxm"))))
 409     (build-system python-build-system)
 410     (propagated-inputs
 411      `(("python-rdflib" ,python-rdflib)))
 412     (home-page "https://github.com/hsolbrig/CFGraph")
 413     (synopsis "RDF Collections flattener for rdflib")
 414     (description
 415      "This package contains RDF Collections flattener for @code{rdflib}.")
 416     (license license:asl2.0)))
 417
 418 (define-public hdt-cpp
 419   (package
 420     (name "hdt-cpp")
 421     (version "1.3.3")
 422     (source (origin
 423               (method git-fetch)
 424               (uri (git-reference
 425                      (url "https://github.com/rdfhdt/hdt-cpp")
 426                      (commit (string-append "v" version))))
 427               (file-name (git-file-name name version))
 428               (sha256
 429                (base32
 430                 "1vsq80jnix6cy78ayag7v8ajyw7h8dqyad1q6xkf2hzz3skvr34z"))))
 431     (build-system gnu-build-system)
 432     (inputs
 433      `(("serd" ,serd)
 434        ("zlib" ,zlib)))
 435     (native-inputs
 436      `(("autoconf" ,autoconf)
 437        ("automake" ,automake)
 438        ("libtool" ,libtool)
 439        ("pkg-config" ,pkg-config)))
 440     (home-page "https://github.com/rdfhdt/hdt-cpp")
 441     (synopsis "C++ implementation of the HDT compression format")
 442     (description "Header Dictionary Triples (HDT) is a compression format for
 443 RDF data that can also be queried for Triple Patterns.  This package provides a
 444 C++ library as well as various command-line tools to to work with HDT.")
 445 (license license:lgpl2.1+)))