1 ;;; GNU Guix --- Functional package management for GNU
2 ;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2018 Ludovic Courtès <ludo@gnu.org>
3 ;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr>
4 ;;; Copyright © 2013, 2017 Cyril Roelandt <tipecaml@gmail.com>
5 ;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org>
6 ;;; Copyright © 2014, 2015, 2016, 2018 Mark H Weaver <mhw@netris.org>
7 ;;; Copyright © 2014, 2015 Eric Bavier <bavier@member.fsf.org>
8 ;;; Copyright © 2015, 2016 Sou Bunnbu <iyzsong@gmail.com>
9 ;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
10 ;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
11 ;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
12 ;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org>
13 ;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
14 ;;; Copyright © 2016, 2017 Nikita <nikita@n0.is>
15 ;;; Copyright © 2016, 2017, 2018 Roel Janssen <roel@gnu.org>
16 ;;; Copyright © 2016 David Craven <david@craven.ch>
17 ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
18 ;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca>
19 ;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org>
20 ;;; Copyright © 2016, 2017, 2018, 2019, 2020 Marius Bakke <mbakke@fastmail.com>
21 ;;; Copyright © 2017, 2018 Julien Lepiller <julien@lepiller.eu>
22 ;;; Copyright © 2017, 2020 Thomas Danckaert <post@thomasdanckaert.be>
23 ;;; Copyright © 2017 Jelle Licht <jlicht@fsfe.org>
24 ;;; Copyright © 2017 Adriano Peluso <catonano@gmail.com>
25 ;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
26 ;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
27 ;;; Copyright © 2017, 2018 Alex Vong <alexvong1995@gmail.com>
28 ;;; Copyright © 2017, 2018 Ben Woodcroft <donttrustben@gmail.com>
29 ;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
30 ;;; Copyright © 2017, 2018 Pierre Langlois <pierre.langlois@gmx.com>
31 ;;; Copyright © 2015, 2017, 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
32 ;;; Copyright © 2017 Kristofer Buffington <kristoferbuffington@gmail.com>
33 ;;; Copyright © 2018 Amirouche Boubekki <amirouche@hypermove.net>
34 ;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
35 ;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com>
36 ;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us>
37 ;;; Copyright © 2019 Alex Griffin <a@ajgrf.com>
38 ;;; Copyright © 2019 Gábor Boskovits <boskovits@gmail.com>
39 ;;; Copyright © 2019 Pierre Langlois <pierre.langlois@gmx.com>
40 ;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
41 ;;; Copyright © 2020 Pierre Neidhardt <mail@ambrevar.xyz>
42 ;;; Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
43 ;;; Copyright © 2020 Tanguy Le Carrour <tanguy@bioneland.org>
44 ;;; Copyright © 2020 Lars-Dominik Braun <ldb@leibniz-psychology.org>
45 ;;; Copyright © 2020 Guy Fleury Iteriteka <gfleury@disroot.org>
46 ;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
48 ;;; This file is part of GNU Guix.
50 ;;; GNU Guix is free software; you can redistribute it and/or modify it
51 ;;; under the terms of the GNU General Public License as published by
52 ;;; the Free Software Foundation; either version 3 of the License, or (at
53 ;;; your option) any later version.
55 ;;; GNU Guix is distributed in the hope that it will be useful, but
56 ;;; WITHOUT ANY WARRANTY; without even the implied warranty of
57 ;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
58 ;;; GNU General Public License for more details.
60 ;;; You should have received a copy of the GNU General Public License
61 ;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
63 (define-module (gnu packages databases)
64 #:use-module (gnu packages)
65 #:use-module (gnu packages admin)
66 #:use-module (gnu packages algebra)
67 #:use-module (gnu packages autotools)
68 #:use-module (gnu packages avahi)
69 #:use-module (gnu packages base)
70 #:use-module (gnu packages bash)
71 #:use-module (gnu packages bison)
72 #:use-module (gnu packages boost)
73 #:use-module (gnu packages check)
74 #:use-module (gnu packages cmake)
75 #:use-module (gnu packages compression)
76 #:use-module (gnu packages crypto)
77 #:use-module (gnu packages curl)
78 #:use-module (gnu packages cyrus-sasl)
79 #:use-module (gnu packages dbm)
80 #:use-module (gnu packages emacs)
81 #:use-module (gnu packages flex)
82 #:use-module (gnu packages gcc)
83 #:use-module (gnu packages gettext)
84 #:use-module (gnu packages glib)
85 #:use-module (gnu packages gnupg)
86 #:use-module (gnu packages guile)
87 #:use-module (gnu packages time)
88 #:use-module (gnu packages golang)
89 #:use-module (gnu packages jemalloc)
90 #:use-module (gnu packages language)
91 #:use-module (gnu packages libevent)
92 #:use-module (gnu packages linux)
93 #:use-module (gnu packages logging)
94 #:use-module (gnu packages man)
95 #:use-module (gnu packages maths)
96 #:use-module (gnu packages ncurses)
97 #:use-module (gnu packages onc-rpc)
98 #:use-module (gnu packages parallel)
99 #:use-module (gnu packages pcre)
100 #:use-module (gnu packages perl)
101 #:use-module (gnu packages perl-check)
102 #:use-module (gnu packages perl-web)
103 #:use-module (gnu packages pkg-config)
104 #:use-module (gnu packages popt)
105 #:use-module (gnu packages protobuf)
106 #:use-module (gnu packages python)
107 #:use-module (gnu packages python-crypto)
108 #:use-module (gnu packages python-web)
109 #:use-module (gnu packages python-science)
110 #:use-module (gnu packages python-xyz)
111 #:use-module (gnu packages rdf)
112 #:use-module (gnu packages readline)
113 #:use-module (gnu packages regex)
114 #:use-module (gnu packages rpc)
115 #:use-module (gnu packages ruby)
116 #:use-module (gnu packages serialization)
117 #:use-module (gnu packages sphinx)
118 #:use-module (gnu packages sqlite)
119 #:use-module (gnu packages tcl)
120 #:use-module (gnu packages terminals)
121 #:use-module (gnu packages textutils)
122 #:use-module (gnu packages tls)
123 #:use-module (gnu packages valgrind)
124 #:use-module (gnu packages web)
125 #:use-module (gnu packages xml)
126 #:use-module ((guix licenses) #:prefix license:)
127 #:use-module (guix packages)
128 #:use-module (guix download)
129 #:use-module (guix bzr-download)
130 #:use-module (guix git-download)
131 #:use-module (guix build-system emacs)
132 #:use-module (guix build-system gnu)
133 #:use-module (guix build-system go)
134 #:use-module (guix build-system perl)
135 #:use-module (guix build-system python)
136 #:use-module (guix build-system ruby)
137 #:use-module (guix build-system cmake)
138 #:use-module (guix build-system scons)
139 #:use-module (guix build-system trivial)
140 #:use-module (guix utils)
141 #:use-module (srfi srfi-1)
142 #:use-module (srfi srfi-26)
143 #:use-module (ice-9 match))
145 (define-public 4store
152 (url "https://github.com/4store/4store")
153 (commit (string-append "v" version))))
154 (file-name (git-file-name name version))
156 (base32 "1kzdfmwpzy64cgqlkcz5v4klwx99w0jk7afckyf7yqbqb4rydmpk"))
157 (patches (search-patches "4store-unset-preprocessor-directive.patch"
158 "4store-fix-buildsystem.patch"))))
159 (build-system gnu-build-system)
163 ("autoconf" ,autoconf)
164 ("automake" ,automake)
165 ("gettext" ,gettext-minimal)
167 ("pcre" ,pcre "bin") ;for 'pcre-config'
168 ("pkg-config" ,pkg-config)))
174 ("readline" ,readline)
176 ("cyrus-sasl" ,cyrus-sasl)
178 ("util-linux" ,util-linux "lib")))
179 ;; http://www.4store.org has been down for a while now.
180 (home-page "https://github.com/4store/4store")
181 (synopsis "Clustered RDF storage and query engine")
182 (description "4store is a RDF/SPARQL store written in C, supporting
183 either single machines or networked clusters.")
184 (license license:gpl3+)))
186 (define-public go-gopkg.in-mgo.v2
188 (name "go-gopkg.in-mgo.v2")
189 (version "2016.08.01")
193 (url "https://github.com/go-mgo/mgo")
194 (commit (string-append "r" version))))
195 (file-name (git-file-name name version))
198 "0rwbi1z63w43b0z9srm8m7iz1fdwx7bq7n2mz862d6liiaqa59jd"))))
199 (build-system go-build-system)
201 `(#:import-path "gopkg.in/mgo.v2"
202 ;; TODO: The tests fail as MongoDB fails to start
203 ;; Error parsing command line: unrecognised option '--chunkSize'
206 (modify-phases %standard-phases
207 (delete 'reset-gzip-timestamps)
208 (add-before 'check 'start-mongodb
209 (lambda* (#:key tests? #:allow-other-keys)
211 (with-directory-excursion "src/gopkg.in/mgo.v2"
212 (invoke "make" "startdb")))
214 (add-after 'check 'stop'mongodb
215 (lambda* (#:key tests? #:allow-other-keys)
217 (with-directory-excursion "src/gopkg.in/mgo.v2"
218 (invoke "make" "stopdb")))
221 `(("go-gopkg.in-check.v1" ,go-gopkg.in-check.v1)
223 ("daemontools" ,daemontools)))
224 (synopsis "@code{mgo} offers a rich MongoDB driver for Go.")
226 "@code{mgo} (pronounced as mango) is a MongoDB driver for the Go language.
227 It implements a rich selection of features under a simple API following
228 standard Go idioms.")
229 (home-page "https://labix.org/mgo")
230 (license license:bsd-2)))
232 (define-public ephemeralpg
240 "https://eradman.com/ephemeralpg/code/ephemeralpg-"
243 (base32 "1j0g7g114ma7y7sadbng5p1ss1zsm9zpicm77qspym6565733vvh"))))
244 (build-system gnu-build-system)
246 '(#:make-flags (list "CC=gcc"
247 (string-append "PREFIX=" %output))
249 (modify-phases %standard-phases
250 (delete 'configure) ; no configure script
251 (add-after 'install 'wrap
252 (lambda* (#:key inputs outputs #:allow-other-keys)
253 (let ((out (assoc-ref outputs "out")))
254 (wrap-program (string-append out "/bin/pg_tmp")
256 (,(string-append (assoc-ref inputs "util-linux")
258 ,(string-append (assoc-ref inputs "postgresql")
261 ,(string-append out "/bin")))))
263 #:test-target "test"))
265 `(("postgresql" ,postgresql)
266 ("util-linux" ,util-linux)))
271 (home-page "https://eradman.com/ephemeralpg/")
272 (synopsis "Run temporary PostgreSQL databases")
274 "@code{pg_tmp} creates temporary PostgreSQL databases, suitable for tasks
275 like running software test suites. Temporary databases created with
276 @code{pg_tmp} have a limited shared memory footprint and are automatically
277 garbage-collected after a configurable number of seconds (the default is
279 (license license:isc)))
281 (define-public es-dump-restore
283 (name "es-dump-restore")
288 (uri (rubygems-uri "es_dump_restore" version))
291 "020yk7f1hw48clmf5501z3xv9shsdchyymcv0y2cci2c1xvr1mim"))))
292 (build-system ruby-build-system)
294 '(#:tests? #f)) ;; No testsuite.
296 `(("ruby-httpclient" ,ruby-httpclient)
297 ("ruby-multi-json" ,ruby-multi-json)
298 ("ruby-progress_bar" ,ruby-progress_bar)
299 ("ruby-rubyzip" ,ruby-rubyzip)
300 ("ruby-thor" ,ruby-thor)))
301 (synopsis "Utility for dumping and restoring ElasticSearch indexes")
303 "This package provides a utility for dumping the contents of an
304 ElasticSearch index to a compressed file and restoring the dumpfile back to an
305 ElasticSearch server")
306 (home-page "https://github.com/patientslikeme/es_dump_restore")
307 (license license:expat)))
309 (define-public leveldb
316 (url "https://github.com/google/leveldb")
318 (file-name (git-file-name name version))
321 "0qrnhiyq7r4wa1a4wi82zgns35smj94mcjsc7kfs1k6ia9ys79z7"))))
322 (build-system cmake-build-system)
324 `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON" "-DLEVELDB_BUILD_TESTS=ON")))
326 `(("snappy" ,snappy)))
327 (home-page "https://github.com/google/leveldb")
328 (synopsis "Fast key-value storage library")
330 "LevelDB is a fast key-value storage library that provides an ordered
331 mapping from string keys to string values.")
332 (license license:bsd-3)))
334 (define-public memcached
342 "https://memcached.org/files/memcached-" version ".tar.gz"))
344 (base32 "1r511qr95q0ywdaql3pdjiwzkfqxhhfzb13ilvl7mznfm4iv1myg"))))
345 (build-system gnu-build-system)
347 `(("libevent" ,libevent)
348 ("cyrus-sasl" ,cyrus-sasl)))
349 (home-page "https://memcached.org/")
350 (synopsis "In-memory caching service")
351 (description "Memcached is an in-memory key-value store. It has a small
352 and generic API, and was originally intended for use with dynamic web
354 (license license:bsd-3)))
356 (define-public libmemcached
358 (name "libmemcached")
360 ;; We build from the sources since we want to build the extra HTML
361 ;; documentation which is not included with the release.
365 (url "lp:libmemcached/1.0")
366 (revision (string-append "tag:" version))))
367 (file-name (string-append name "-" version "-checkout"))
370 "1842s4dxdh21gdr46q4dgxigidcs6dkqnbnqjwb9l8r0bqx5nb10"))
372 (search-patches "libmemcached-build-with-gcc7.patch"))))
373 (build-system gnu-build-system)
375 `(("memcached" ,memcached)
377 ("autoconf" ,autoconf)
378 ("automake" ,automake)
382 ("python-sphinx" ,python-sphinx))) ;to build the HTML doc.
384 `(("libevent" ,libevent)
385 ("cyrus-sasl" ,cyrus-sasl)))
386 (outputs '("out" "doc"))
389 (modify-phases %standard-phases
390 (add-before 'bootstrap 'fix-configure.ac
391 ;; Move the AC_CONFIG_AUX_DIR macro use under AC_INIT, otherwise we
392 ;; get the error ``configure: error: cannot find install-sh,
393 ;; install.sh, or shtool in "." "./.." "./../.."`` (see:
394 ;; https://debbugs.gnu.org/cgi/bugreport.cgi?bug=19539 and
395 ;; https://bugs.launchpad.net/libmemcached/+bug/1803922).
397 (delete-file "bootstrap.sh") ;not useful in the context of Guix
398 (substitute* "configure.ac"
399 (("^AC_CONFIG_AUX_DIR\\(\\[build-aux\\]\\).*") "")
400 (("(^AC_INIT.*)" anchor)
401 (string-append anchor "AC_CONFIG_AUX_DIR([build-aux])\n")))
403 (add-before 'bootstrap 'disable-failing-tests
404 ;; See: https://bugs.launchpad.net/libmemcached/+bug/1803926
406 ;; Mark some heavily failing test suites as expected to fail.
407 (substitute* "Makefile.am"
408 (("(XFAIL_TESTS =[^\n]*)" xfail_tests)
409 (string-append xfail_tests " tests/testudp"
410 " tests/libmemcached-1.0/testapp"
411 " tests/libmemcached-1.0/testsocket")))
412 ;; Disable two tests of the unittest test suite.
413 (substitute* "libtest/unittest.cc"
414 ((".*echo_fubar_BINARY \\},.*") "")
415 ((".*application_doesnotexist_BINARY \\},.*") ""))
417 (add-after 'disable-dns-tests 'build-and-install-html-doc
418 (lambda* (#:key outputs #:allow-other-keys)
419 (let ((html (string-append (assoc-ref outputs "doc")
420 "/share/doc/libmemcached/html/")))
421 (invoke "make" "install-html")
422 ;; Cleanup useless files.
423 (for-each delete-file-recursively
424 (map (lambda (x) (string-append html x))
425 '("_sources" ".doctrees" ".buildinfo"))))
427 (home-page "https://libmemcached.org/")
428 (synopsis "C++ library for memcached")
429 (description "libMemcached is a library to use memcached in C/C++
430 applications. It comes with a complete reference guide and documentation of
431 the API, and provides features such as:
433 @item Asynchronous and synchronous transport support
434 @item Consistent hashing and distribution
435 @item Tunable hashing algorithm to match keys
436 @item Access to large object support
437 @item Local replication
439 (license license:bsd-3)))
441 (define-public python-pylibmc
443 (name "python-pylibmc")
448 (uri (pypi-uri "pylibmc" version))
450 (base32 "1sg7d9j0v6g3xg3finf4l1hb72c13vcyyi6rqrc9shbx903d93ca"))))
451 (build-system python-build-system)
454 (modify-phases %standard-phases
455 (add-before 'check 'start-memcached-daemon
456 ;; The test suite requires a memcached server.
458 (invoke "memcached" "-d"))))))
460 `(("memcached" ,memcached)
461 ("python-nose" ,python-nose)))
463 `(("libmemcached" ,libmemcached)
465 ("cyrus-sasl" ,cyrus-sasl)))
466 (home-page "http://sendapatch.se/projects/pylibmc/")
467 (synopsis "Python client for memcached")
469 "@code{pylibmc} is a client in Python for memcached. It is a wrapper
470 around TangentOrg’s libmemcached library, and can be used as a drop-in
471 replacement for the code@{python-memcached} library.")
472 (license license:bsd-3)))
474 (define-public python2-pylibmc
475 (package-with-python2 python-pylibmc))
477 (define-public mongodb
483 (uri (string-append "https://github.com/mongodb/mongo/archive/r"
485 (file-name (string-append name "-" version ".tar.gz"))
487 (base32 "0676lvkljj7a5hdhv78dbykqnqrj9lbn9799mi84b8vbnzsq961r"))
488 (modules '((guix build utils)))
491 (for-each (lambda (dir)
492 (delete-file-recursively
493 (string-append "src/third_party/" dir)))
494 '("pcre-8.41" "scons-2.5.0" "snappy-1.1.3"
495 "valgrind-3.11.0" "wiredtiger"
496 "yaml-cpp-0.5.3" "zlib-1.2.8"))
500 (search-patch "mongodb-support-unknown-linux-distributions.patch")))))
501 (build-system scons-build-system)
503 `(("openssl" ,openssl-1.0)
505 ,@(match (%current-system)
506 ((or "x86_64-linux" "aarch64-linux" "mips64el-linux")
507 `(("wiredtiger" ,wiredtiger)))
509 ("yaml-cpp" ,yaml-cpp)
513 `(("valgrind" ,valgrind)
516 ("python2-pymongo" ,python2-pymongo)
517 ("python2-pyyaml" ,python2-pyyaml)
518 ("tzdata" ,tzdata-for-tests)))
520 `(#:scons ,scons-python2
522 (let ((common-options
523 `(;; "--use-system-tcmalloc" TODO: Missing gperftools
525 ;; wiredtiger is 64-bit only
526 ,,(if (any (cute string-prefix? <> (or (%current-target-system)
528 '("i686-linux" "armhf-linux"))
530 ``"--use-system-wiredtiger")
532 ;; build/opt/mongo/db/fts/unicode/string.o failed: Error 1
533 ;; --use-system-boost
534 "--use-system-snappy"
536 "--use-system-valgrind"
537 ;; "--use-system-stemmer" TODO: Missing relevant package
539 "--disable-warnings-as-errors"
540 ,(format #f "--jobs=~a" (parallel-job-count))
542 (modify-phases %standard-phases
543 (add-after 'unpack 'patch
545 ;; Remove use of GNU extensions in parse_number_test.cpp, to
546 ;; allow compiling with GCC 7 or later
547 ;; https://jira.mongodb.org/browse/SERVER-28063
548 (substitute* "src/mongo/base/parse_number_test.cpp"
549 (("0xabcab\\.defdefP-10")
550 "687.16784283419838"))
552 (add-after 'unpack 'scons-propagate-environment
554 ;; Modify the SConstruct file to arrange for
555 ;; environment variables to be propagated.
556 (substitute* "SConstruct"
557 (("^env = Environment\\(")
558 "env = Environment(ENV=os.environ, "))
560 (add-after 'unpack 'create-version-file
562 (call-with-output-file "version.json"
564 (display ,(simple-format #f "{
570 (apply invoke `("scons"
572 "mongod" "mongo" "mongos"))))
574 (lambda* (#:key tests? inputs #:allow-other-keys)
576 (string-append (assoc-ref inputs "tzdata")
579 ;; Note that with the tests, especially the unittests, the
580 ;; build can take up to ~45GB of space, as many tests are
581 ;; individual executable files, with some being hundreds of
582 ;; megabytes in size.
583 (apply invoke `("scons" ,@common-options "dbtest" "unittests"))
584 (substitute* "build/unittests.txt"
585 ;; TODO: Don't run the async_stream_test, as it hangs
586 (("^build\\/opt\\/mongo\\/executor\\/async\\_stream\\_test\n$")
588 ;; TODO: This test fails
589 ;; Expected 0UL != disks.size() (0 != 0) @src/mongo/util/procparser_test.cpp:476
590 (("^build\\/opt\\/mongo\\/util\\/procparser\\_test\n$")
592 (invoke "python" "buildscripts/resmoke.py"
593 "--suites=dbtest,unittests"
594 (format #f "--jobs=~a" (parallel-job-count))))
597 (lambda* (#:key outputs #:allow-other-keys)
598 (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
599 (install-file "mongod" bin)
600 (install-file "mongos" bin)
601 (install-file "mongo" bin))
603 (home-page "https://www.mongodb.org/")
604 (synopsis "High performance and high availability document database")
606 "Mongo is a high-performance, high availability, schema-free
607 document-oriented database. A key goal of MongoDB is to bridge the gap
608 between key/value stores (which are fast and highly scalable) and traditional
609 RDBMS systems (which are deep in functionality).")
610 (license (list license:agpl3
611 ;; Some parts are licensed under the Apache License
621 (uri (pypi-uri "mycli" version))
623 (base32 "1lq2x95553vdmhw13cxcgsd2g2i32izhsb7hxd4m1iwf9b3msbpv"))))
624 (build-system python-build-system)
626 `(#:tests? #f)) ; tests expect a running MySQL
628 `(("python-cli-helpers" ,python-cli-helpers)
629 ("python-click" ,python-click)
630 ("python-configobj" ,python-configobj)
631 ("python-cryptography" ,python-cryptography)
632 ("python-prompt-toolkit" ,python-prompt-toolkit)
633 ("python-pygments" ,python-pygments)
634 ("python-pymysql" ,python-pymysql)
635 ("python-sqlparse" ,python-sqlparse)))
636 (home-page "http://mycli.net")
638 "Terminal Client for MySQL with AutoCompletion and Syntax Highlighting")
640 "MyCLI is a command line interface for MySQL, MariaDB, and Percona with
641 auto-completion and syntax highlighting.")
642 (license license:bsd-3)))
644 ;; XXX When updating, check whether boost-for-mysql is still needed.
645 ;; It might suffice to patch ‘cmake/boost.cmake’ as done in the past.
652 (uri (list (string-append
653 "https://dev.mysql.com/get/Downloads/MySQL-"
654 (version-major+minor version) "/"
655 name "-" version ".tar.gz")
657 "https://downloads.mysql.com/archives/get/file/"
658 name "-" version ".tar.gz")))
661 "1fhv16zr46pxm1j8vb8x8mh3nwzglg01arz8gnazbmjqldr5idpq"))))
662 (build-system cmake-build-system)
665 '("-DBUILD_CONFIG=mysql_release"
668 "-DDEFAULT_CHARSET=utf8"
669 "-DDEFAULT_COLLATION=utf8_general_ci"
670 "-DMYSQL_DATADIR=/var/lib/mysql"
671 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
672 "-DINSTALL_INFODIR=share/mysql/docs"
673 "-DINSTALL_MANDIR=share/man"
674 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
675 "-DINSTALL_SCRIPTDIR=bin"
676 "-DINSTALL_INCLUDEDIR=include/mysql"
677 "-DINSTALL_DOCREADMEDIR=share/mysql/docs"
678 "-DINSTALL_SUPPORTFILESDIR=share/mysql"
679 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
680 "-DINSTALL_DOCDIR=share/mysql/docs"
681 "-DINSTALL_SHAREDIR=share/mysql"
682 ;; Get rid of test data.
683 "-DINSTALL_MYSQLTESTDIR="
684 "-DINSTALL_SQLBENCHDIR=")
685 #:phases (modify-phases %standard-phases
687 'install 'remove-extra-binaries
688 (lambda* (#:key outputs #:allow-other-keys)
689 (let ((out (assoc-ref outputs "out")))
690 ;; Remove the 3 *_embedded files, which weigh in at
692 (for-each delete-file
693 (find-files (string-append out "/bin")
699 ("pkg-config" ,pkg-config)))
701 `(("boost" ,boost-for-mysql)
703 ("libtirpc" ,libtirpc)
706 ("rpcsvc-proto" ,rpcsvc-proto) ; rpcgen
708 (home-page "https://www.mysql.com/")
709 (synopsis "Fast, easy to use, and popular database")
711 "MySQL is a fast, reliable, and easy to use relational database
712 management system that supports the standardized Structured Query
714 (license license:gpl2)))
716 (define-public mariadb
722 (uri (string-append "https://downloads.mariadb.com/MariaDB"
723 "/mariadb-" version "/source/mariadb-"
727 "1mfs0x4c0z7d306n128dxdawk3llk25vxif5zwl20fv1z5qhz3wx"))
728 (patches (search-patches "mariadb-client-test-32bit.patch"))
729 (modules '((guix build utils)))
732 ;; Delete bundled snappy and xz.
733 (delete-file-recursively "storage/tokudb/PerconaFT/third_party")
734 (substitute* "storage/tokudb/PerconaFT/CMakeLists.txt"
735 ;; This file checks that the bundled sources are present and
736 ;; declares build procedures for them.
737 (("^include\\(TokuThirdParty\\)") ""))
738 (substitute* "storage/tokudb/PerconaFT/ft/CMakeLists.txt"
739 ;; Don't attempt to use the procedures we just removed.
740 ((" build_lzma build_snappy") ""))
742 ;; Preserve CMakeLists.txt for these.
743 (for-each (lambda (file)
744 (unless (string-suffix? "CMakeLists.txt" file)
746 (append (find-files "extra/yassl")
747 (find-files "pcre") (find-files "zlib")))
749 (build-system cmake-build-system)
750 (outputs '("out" "lib" "dev"))
754 "-DBUILD_CONFIG=mysql_release"
755 ;; Linking with libarchive fails, like this:
757 ;; ld: /gnu/store/...-libarchive-3.2.2/lib/libarchive.a(archive_entry.o):
758 ;; relocation R_X86_64_32 against `.bss' can not be used when
759 ;; making a shared object; recompile with -fPIC
761 ;; For now, disable the features that that use libarchive (xtrabackup).
762 "-DWITH_LIBARCHIVE=OFF"
764 ;; Disable the TokuDB engine, because its test suite frequently fails,
765 ;; and loading it crashes the server: <https://bugs.gnu.org/35521>.
768 ;; Ensure the system libraries are used.
769 "-DWITH_JEMALLOC=yes"
774 "-DDEFAULT_CHARSET=utf8"
775 "-DDEFAULT_COLLATION=utf8_general_ci"
776 "-DMYSQL_DATADIR=/var/lib/mysql"
777 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
778 (string-append "-DCMAKE_INSTALL_PREFIX=" (assoc-ref %outputs "lib"))
779 (string-append "-DCMAKE_INSTALL_RPATH=" (assoc-ref %outputs "lib")
781 (string-append "-DINSTALL_INFODIR=" (assoc-ref %outputs "out")
783 (string-append "-DINSTALL_MANDIR=" (assoc-ref %outputs "out")
785 (string-append "-DINSTALL_SCRIPTDIR=" (assoc-ref %outputs "out") "/bin")
786 (string-append "-DINSTALL_BINDIR=" (assoc-ref %outputs "out") "/bin")
787 "-DCMAKE_INSTALL_LIBDIR=lib"
788 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
789 (string-append "-DINSTALL_INCLUDEDIR=" (assoc-ref %outputs "dev")
791 (string-append "-DINSTALL_DOCREADMEDIR=" (assoc-ref %outputs "out")
793 (string-append "-DINSTALL_DOCDIR=" (assoc-ref %outputs "out")
795 (string-append "-DINSTALL_SUPPORTFILESDIR=" (assoc-ref %outputs "out")
796 "/share/mysql/support-files")
797 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
798 "-DINSTALL_SHAREDIR=share")
800 (modify-phases %standard-phases
801 ,@(if (string-prefix? "arm" (%current-system))
802 ;; XXX: Because of the GCC 5 input, we need to hide GCC 7 from
803 ;; CPLUS_INCLUDE_PATH so that its headers do not shadow GCC 5.
804 '((add-after 'set-paths 'hide-default-gcc
805 (lambda* (#:key inputs #:allow-other-keys)
806 (let ((gcc (assoc-ref inputs "gcc")))
807 (setenv "CPLUS_INCLUDE_PATH"
809 (delete (string-append gcc "/include/c++")
810 (string-split (getenv "CPLUS_INCLUDE_PATH")
815 (add-after 'unpack 'fix-pcre-detection
817 ;; The bundled PCRE in MariaDB has a patch that was upstreamed
818 ;; in version 8.34. Unfortunately the upstream patch behaves
819 ;; slightly differently and the build system fails to detect it.
820 ;; See <https://bugs.exim.org/show_bug.cgi?id=2173>.
821 ;; XXX: Consider patching PCRE instead.
822 (substitute* "cmake/pcre.cmake"
823 ((" OR NOT PCRE_STACK_SIZE_OK") ""))
825 (add-after 'unpack 'adjust-tests
827 (let ((disabled-tests
828 '(;; These fail because root@hostname == root@localhost in
829 ;; the build environment, causing a user count mismatch.
830 ;; See <https://jira.mariadb.org/browse/MDEV-7761>.
832 "main.explain_non_select"
834 "main.stat_tables_innodb"
835 "roles.acl_statistics"
837 ;; This file contains a time bomb which makes it fail after
838 ;; 2030-12-31. See <https://bugs.gnu.org/34351> for details.
841 ;; FIXME: This test fails on i686:
842 ;; -myisampack: Can't create/write to file (Errcode: 17 "File exists")
843 ;; +myisampack: Can't create/write to file (Errcode: 17 "File exists)
844 ;; When running "myisampack --join=foo/t3 foo/t1 foo/t2"
845 ;; (all three tables must exist and be identical)
846 ;; in a loop it produces the same error around 1/240 times.
847 ;; montywi on #maria suggested removing the real_end check in
848 ;; "strings/my_vsnprintf.c" on line 503, yet it still does not
849 ;; reach the ending quote occasionally. Disable it for now.
851 ;; FIXME: This test fails on armhf-linux:
852 "mroonga/storage.index_read_multiple_double"))
854 ;; This file contains a list of known-flaky tests for this
855 ;; release. Append our own items.
856 (unstable-tests (open-file "mysql-test/unstable-tests" "a")))
857 (for-each (lambda (test)
858 (format unstable-tests "~a : ~a\n"
859 test "Disabled in Guix"))
861 (close-port unstable-tests)
863 ;; XXX: This test fails because it expects a latin1 charset and
864 ;; collation. See <https://jira.mariadb.org/browse/MDEV-21264>.
865 (substitute* "mysql-test/r/gis_notembedded.result"
866 (("latin1_swedish_ci") "utf8_general_ci")
867 (("\tlatin1") "\tutf8"))
869 (substitute* "mysql-test/suite/binlog/t/binlog_mysqlbinlog_stop_never.test"
873 (substitute* "mysql-test/mysql-test-run.pl"
874 (("/bin/ls") (which "ls"))
875 (("/bin/sh") (which "sh")))
877 (add-before 'configure 'disable-plugins
879 (let ((disable-plugin (lambda (name)
880 (call-with-output-file
881 (string-append "plugin/" name
884 (format port "\n")))))
885 (disabled-plugins '(;; XXX: Causes a test failure.
887 (for-each disable-plugin disabled-plugins)
890 (lambda* (#:key (tests? #t) #:allow-other-keys)
892 (with-directory-excursion "mysql-test"
893 (invoke "./mtr" "--verbose"
895 "--testcase-timeout=40"
896 "--suite-timeout=600"
897 "--parallel" (number->string (parallel-job-count))
898 "--skip-test-list=unstable-tests"))
899 (format #t "test suite not run~%"))
902 'install 'post-install
903 (lambda* (#:key inputs outputs #:allow-other-keys)
904 (let* ((out (assoc-ref outputs "out"))
905 (dev (assoc-ref outputs "dev"))
906 (lib (assoc-ref outputs "lib"))
907 (openssl (assoc-ref inputs "openssl")))
908 (substitute* (string-append out "/bin/mysql_install_db")
910 (string-append "basedir=\"" out "\"")))
911 ;; Remove unneeded files for testing.
912 (with-directory-excursion lib
913 (for-each delete-file-recursively
914 '("data" "mysql-test" "sql-bench"))
915 ;; And static libraries.
916 (for-each delete-file (find-files "lib" "\\.a$")))
917 (with-directory-excursion out
918 (delete-file "share/man/man1/mysql-test-run.pl.1")
919 ;; Delete huge and unnecessary executables.
920 (for-each delete-file (find-files "bin" "(test|embedded)")))
921 (mkdir-p (string-append dev "/share"))
922 (mkdir-p (string-append dev "/bin"))
923 (rename-file (string-append lib "/bin/mysqld")
924 (string-append out "/bin/mysqld"))
925 (rename-file (string-append lib "/share/pkgconfig")
926 (string-append dev "/share/pkgconfig"))
927 (rename-file (string-append out "/bin/mysql_config")
928 (string-append dev "/bin/mysql_config"))
931 (substitute* (string-append out "/bin/mysql_install_db")
932 (("\\$basedir/share/mysql")
933 (string-append lib "/share/mysql")))
935 ;; Embed an absolute reference to OpenSSL in mysql_config
936 ;; and the pkg-config file to avoid propagation.
937 (substitute* (list (string-append dev "/bin/mysql_config")
938 (string-append dev "/share/pkgconfig/mariadb.pc"))
939 (("-lssl -lcrypto" all)
940 (string-append "-L" openssl "/lib " all)))
945 ;; XXX: On armhf, use GCC 5 to work around <https://bugs.gnu.org/37605>.
946 ,@(if (string-prefix? "armhf" (%current-system))
951 `(("jemalloc" ,jemalloc)
955 ("openssl" ,openssl-1.0)
960 ;; The test suite is very resource intensive and can take more than three
961 ;; hours on a x86_64 system. Give slow and busy machines some leeway.
962 (properties '((timeout . 64800))) ;18 hours
963 (home-page "https://mariadb.org/")
964 (synopsis "SQL database server")
966 "MariaDB is a multi-user and multi-threaded SQL database server, designed
967 as a drop-in replacement of MySQL.")
968 (license license:gpl2)))
970 (define-public mariadb-connector-c
972 (name "mariadb-connector-c")
977 "https://downloads.mariadb.org/f/connector-c-"
978 version "/mariadb-connector-c-"
979 version "-src.tar.gz"))
982 "1izjzf7yzjqzlk8dkp327fa9lawsv2hnnlnr7g5lshyx5azrk38h"))))
984 `(("openssl" ,openssl)))
985 (build-system cmake-build-system)
987 '(#:tests? #f)) ; no tests
988 (home-page "https://mariadb.com/kb/en/mariadb-connector-c/")
989 (synopsis "Client library to connect to MySQL or MariaDB")
990 (description "The MariaDB Connector/C is used to connect applications
991 developed in C/C++ to MariaDB and MySQL databases.")
992 (license license:lgpl2.1+)))
994 ;; Don't forget to update the other postgresql packages when upgrading this one.
995 (define-public postgresql
1001 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1002 version "/postgresql-" version ".tar.bz2"))
1005 "1qal0yp7a90yzya7hl56gsmw5fvacplrdhpn7h9gnbyr1i2iyw2d"))
1006 (patches (search-patches "postgresql-disable-resolve_symlinks.patch"))))
1007 (build-system gnu-build-system)
1009 `(#:configure-flags '("--with-uuid=e2fs" "--with-openssl")
1011 (modify-phases %standard-phases
1012 (add-before 'configure 'patch-/bin/sh
1014 ;; Refer to the actual shell.
1015 (substitute* '("src/bin/pg_ctl/pg_ctl.c"
1016 "src/bin/psql/command.c")
1017 (("/bin/sh") (which "sh")))
1019 (add-after 'build 'build-contrib
1021 (invoke "make" "-C" "contrib")))
1022 (add-after 'install 'install-contrib
1024 (invoke "make" "-C" "contrib" "install"))))))
1026 `(("readline" ,readline)
1027 ("libuuid" ,util-linux "lib")
1028 ("openssl" ,openssl)
1030 (home-page "https://www.postgresql.org/")
1031 (synopsis "Powerful object-relational database system")
1033 "PostgreSQL is a powerful object-relational database system. It is fully
1034 ACID compliant, has full support for foreign keys, joins, views, triggers, and
1035 stored procedures (in multiple languages). It includes most SQL:2008 data
1036 types, including INTEGER, NUMERIC, BOOLEAN, CHAR, VARCHAR, DATE, INTERVAL, and
1037 TIMESTAMP. It also supports storage of binary large objects, including
1038 pictures, sounds, or video.")
1039 (license (license:x11-style "file://COPYRIGHT"))))
1041 (define-public postgresql-11
1043 (inherit postgresql)
1048 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1049 version "/postgresql-" version ".tar.bz2"))
1052 "0w1iq488kpzfgfnlw4k32lz5by695mpnkq461jrgsr99z5zlz4j9"))))))
1054 (define-public postgresql-9.6
1056 (inherit postgresql)
1061 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1062 version "/postgresql-" version ".tar.bz2"))
1065 "1rr2dgv4ams8r2lp13w85c77rkmzpb88fjlc28mvlw6zq2fblv2w"))))))
1067 (define-public python-pymysql
1069 (name "python-pymysql")
1074 (uri (pypi-uri "PyMySQL" version))
1076 (base32 "1ry8lxgdc1p3k7gbw20r405jqi5lvhi5wk83kxdbiv8xv3f5kh6q"))))
1077 (build-system python-build-system)
1079 `(("python-unittest2" ,python-unittest2)))
1081 `(("python-cryptography" ,python-cryptography)))
1083 `(#:tests? #f)) ; tests expect a running MySQL
1084 (home-page "https://github.com/PyMySQL/PyMySQL/")
1085 (synopsis "Pure-Python MySQL driver")
1087 "PyMySQL is a pure-Python MySQL client library, based on PEP 249.
1088 Most public APIs are compatible with @command{mysqlclient} and MySQLdb.")
1089 (license license:expat)))
1091 (define-public python2-pymysql
1092 (package-with-python2 python-pymysql))
1101 (uri (string-append "http://fallabs.com/" name "/"
1102 name "-" version ".tar.gz"))
1105 "0gmpvhn02pkq280ffmn4da1g4mdr1xxz7l80b7y4n7km1mrzwrml"))))
1106 (build-system gnu-build-system)
1108 `(#:configure-flags (list (string-append "LDFLAGS=-Wl,-rpath="
1109 (assoc-ref %outputs "out")
1111 #:make-flags (list "CFLAGS=-fPIC")))
1112 (home-page "https://fallabs.com/qdbm/")
1113 (synopsis "Key-value database")
1114 (description "QDBM is a library of routines for managing a
1115 database. The database is a simple data file containing key-value
1116 pairs. Every key and value is serial bytes with variable length.
1117 Binary data as well as character strings can be used as a key or a
1118 value. There is no concept of data tables or data types. Records are
1119 organized in a hash table or B+ tree.")
1120 (license license:lgpl2.1+)))
1122 (define-public recutils
1128 (uri (string-append "mirror://gnu/recutils/recutils-"
1132 "14xiln4immfsw8isnvwvq0h23f6z0wilpgsc4qzabnrzb5lsx3nz"))))
1133 (build-system gnu-build-system)
1135 (arguments '(#:configure-flags
1136 (list (string-append "--with-bash-headers="
1137 (assoc-ref %build-inputs "bash:include")
1140 (native-inputs `(("bc" ,bc)
1141 ("bash:include" ,bash "include")
1143 ("libuuid" ,util-linux)
1144 ("pkg-config" ,pkg-config)))
1146 ;; TODO: Add more optional inputs.
1147 (inputs `(("curl" ,curl)
1148 ("libgcrypt" ,libgcrypt)))
1149 (synopsis "Manipulate plain text files as databases")
1151 "GNU Recutils is a set of tools and libraries for creating and
1152 manipulating text-based, human-editable databases. Despite being text-based,
1153 databases created with Recutils carry all of the expected features such as
1154 unique fields, primary keys, time stamps and more. Many different field
1155 types are supported, as is encryption.")
1156 (license license:gpl3+)
1157 (home-page "https://www.gnu.org/software/recutils/")))
1159 (define-public emacs-recutils
1162 (name "emacs-recutils")
1163 (build-system emacs-build-system)
1166 (modify-phases %standard-phases
1167 (add-after 'unpack 'change-directory
1173 (synopsis "Emacs mode for working with recutils database files")
1174 (description "This package provides an Emacs major mode @code{rec-mode}
1175 for working with GNU Recutils text-based, human-editable databases. It
1176 supports editing, navigation, and querying of recutils database files
1177 including field and record folding.")))
1179 (define-public rocksdb
1186 (url "https://github.com/facebook/rocksdb")
1187 (commit (string-append "v" version))))
1188 (file-name (git-file-name name version))
1191 "0n19p9cd13jg0lnibrzwkxs4xlrhyj3knypkd2ic41arbds0bdnl"))
1192 (modules '((guix build utils)))
1195 ;; TODO: unbundle gtest.
1196 (delete-file "build_tools/gnu_parallel")
1197 (substitute* "Makefile"
1198 (("build_tools/gnu_parallel") "parallel"))
1200 (build-system gnu-build-system)
1202 `(#:make-flags (list "CC=gcc" "V=1"
1203 ;; Ceph requires that RTTI is enabled.
1205 (string-append "INSTALL_PATH="
1206 (assoc-ref %outputs "out"))
1208 ;; Running the full test suite takes hours and require
1209 ;; a lot of disk space. Instead we only run a subset
1210 ;; (see .travis.yml and Makefile).
1211 "ROCKSDBTESTS_END=db_tailing_iter_test")
1212 #:test-target "check_some"
1213 ;; Many tests fail on 32-bit platforms. There are multiple reports about
1214 ;; this upstream, but it's not going to be supported any time soon.
1215 #:tests? (let ((system ,(or (%current-target-system)
1216 (%current-system))))
1217 (or (string-prefix? "x86_64-linux" system)
1218 (string-prefix? "aarch64-linux" system)))
1220 (modify-phases %standard-phases
1221 (add-after 'unpack 'patch-Makefile
1223 (substitute* "Makefile"
1224 ;; Don't depend on the static library when installing.
1225 (("install: install-static")
1226 "install: install-shared")
1227 (("#!/bin/sh") (string-append "#!" (which "sh"))))
1230 ;; The default target is only needed for tests and built on demand.
1232 (add-before 'check 'disable-optimizations
1234 ;; Prevent the build from passing '-march=native' to the compiler.
1235 (setenv "PORTABLE" "1")
1237 (add-before 'check 'disable-failing-tests
1239 (substitute* "Makefile"
1240 ;; These tests reliably fail due to "Too many open files".
1241 (("^[[:blank:]]+env_test[[:blank:]]+\\\\") "\\")
1242 (("^[[:blank:]]+persistent_cache_test[[:blank:]]+\\\\") "\\"))
1244 (add-after 'check 'build
1245 ;; The default build target is a debug build for tests. The
1246 ;; install target depends on the "shared_lib" release target
1247 ;; so we build it here for clarity.
1248 (lambda* (#:key (make-flags '()) parallel-build? #:allow-other-keys)
1249 (apply invoke "make" "shared_lib"
1250 `(,@(if parallel-build?
1251 `("-j" ,(number->string (parallel-job-count)))
1255 `(("parallel" ,parallel)
1258 ("python" ,python-2)
1263 ("jemalloc" ,jemalloc)
1267 (home-page "https://rocksdb.org/")
1268 (synopsis "Persistent key-value store for fast storage")
1270 "RocksDB is a library that forms the core building block for a fast
1271 key-value server, especially suited for storing data on flash drives. It
1272 has a @dfn{Log-Structured-Merge-Database} (LSM) design with flexible tradeoffs
1273 between @dfn{Write-Amplification-Factor} (WAF), @dfn{Read-Amplification-Factor}
1274 (RAF) and @dfn{Space-Amplification-Factor} (SAF). It has multi-threaded
1275 compactions, making it specially suitable for storing multiple terabytes of
1276 data in a single database. RocksDB is partially based on @code{LevelDB}.")
1277 ;; RocksDB is dual licensed under GPL2 and ASL 2.0. Some header
1278 ;; files carry the 3-clause BSD license.
1279 (license (list license:gpl2 license:asl2.0 license:bsd-3))))
1281 (define-public sparql-query
1283 (name "sparql-query")
1288 (url "https://github.com/tialaramex/sparql-query")
1291 (base32 "0a84a89idpjhj9w2y3fmvzv7ldps1cva1kxvfmh897k02kaniwxk"))
1292 (file-name (git-file-name name version))))
1293 (build-system gnu-build-system)
1297 ("libxml2" ,libxml2)
1298 ("ncurses" ,ncurses)
1299 ("readline" ,readline)))
1301 `(("pkg-config" ,pkg-config)))
1303 `(#:make-flags '("CC=gcc")
1305 (modify-phases %standard-phases
1307 ;; The Makefile uses git to obtain versioning information. This phase
1308 ;; substitutes the git invocation with the package version.
1309 (add-after 'unpack 'remove-git-dependency
1311 (substitute* "Makefile"
1313 (string-append "gitrev = \"v" ,version "\"")))
1315 ;; The install phase of the Makefile assumes $PREFIX/usr/local/bin.
1316 ;; This replacement does the same thing, except for using $PREFIX/bin
1319 (lambda* (#:key outputs #:allow-other-keys)
1320 (let* ((out (assoc-ref outputs "out"))
1321 (bin (string-append out "/bin")))
1322 (install-file "sparql-query" bin)
1323 (symlink (string-append bin "/sparql-query")
1324 (string-append bin "/sparql-update")))
1327 (lambda* (#:key make-flags #:allow-other-keys)
1328 (apply invoke "make" `(,@make-flags "scan-test"))
1329 (invoke "./scan-test"))))))
1330 (home-page "https://github.com/tialaramex/sparql-query/")
1331 (synopsis "Command-line tool for accessing SPARQL endpoints over HTTP")
1332 (description "Sparql-query is a command-line tool for accessing SPARQL
1333 endpoints over HTTP. It has been intentionally designed to @code{feel} similar to
1334 tools for interrogating SQL databases. For example, you can enter a query over
1335 several lines, using a semi-colon at the end of a line to indicate the end of
1336 your query. It also supports readline so that you can more easily recall and
1337 edit previous queries, even across sessions. It can be used non-interactively,
1338 for example from a shell script.")
1339 ;; Some files (like scan-sparql.c) contain a GPLv3+ license header, while
1340 ;; others (like sparql-query.c) contain a GPLv2+ license header.
1341 (license (list license:gpl3+))))
1343 (define-public sqitch
1351 "mirror://cpan/authors/id/D/DW/DWHEELER/App-Sqitch-v"
1354 (base32 "1ayiwg9kh3w0nbacbcln7h944z94vq5vnnd5diz86033bpbnq57f"))))
1355 (build-system perl-build-system)
1358 (modify-phases %standard-phases
1359 (add-before 'check 'set-check-environment
1362 (setenv "HOME" "/tmp")
1364 (add-after 'install 'wrap-program
1365 (lambda* (#:key outputs #:allow-other-keys)
1366 (let* ((out (assoc-ref outputs "out"))
1367 (path (getenv "PERL5LIB")))
1368 (wrap-program (string-append out "/bin/sqitch")
1369 `("PERL5LIB" ":" prefix
1370 (,(string-append out "/lib/perl5/site_perl"
1375 `(("perl-capture-tiny" ,perl-capture-tiny)
1376 ("perl-io-pager" ,perl-io-pager)
1377 ("perl-module-build" ,perl-module-build)
1378 ("perl-module-runtime" ,perl-module-runtime)
1379 ("perl-path-class" ,perl-path-class)
1380 ("perl-test-deep" ,perl-test-deep)
1381 ("perl-test-dir" ,perl-test-dir)
1382 ("perl-test-exception" ,perl-test-exception)
1383 ("perl-test-file" ,perl-test-file)
1384 ("perl-test-file-contents" ,perl-test-file-contents)
1385 ("perl-test-mockmodule" ,perl-test-mockmodule)
1386 ("perl-test-mockobject" ,perl-test-mockobject)
1387 ("perl-test-nowarnings" ,perl-test-nowarnings)
1388 ("perl-test-warn" ,perl-test-warn)))
1390 `(("perl-class-xsaccessor" ,perl-class-xsaccessor)
1391 ("perl-clone" ,perl-clone)
1392 ("perl-config-gitlike" ,perl-config-gitlike)
1393 ("perl-datetime" ,perl-datetime)
1394 ("perl-datetime-timezone" ,perl-datetime-timezone)
1395 ("perl-dbd-mysql" ,perl-dbd-mysql)
1396 ("perl-dbd-pg" ,perl-dbd-pg)
1397 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1398 ("perl-dbi" ,perl-dbi)
1399 ("perl-devel-stacktrace" ,perl-devel-stacktrace)
1400 ("perl-encode-locale" ,perl-encode-locale)
1401 ("perl-hash-merge" ,perl-hash-merge)
1402 ("perl-ipc-run3" ,perl-ipc-run3)
1403 ("perl-ipc-system-simple" ,perl-ipc-system-simple)
1404 ("perl-libintl-perl" ,perl-libintl-perl)
1405 ("perl-list-moreutils" ,perl-list-moreutils)
1406 ("perl-moo" ,perl-moo)
1407 ("perl-mysql-config" ,perl-mysql-config)
1408 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
1409 ("perl-path-class" ,perl-path-class)
1410 ("perl-perlio-utf8_strict" ,perl-perlio-utf8_strict)
1411 ("perl-string-formatter" ,perl-string-formatter)
1412 ("perl-string-shellquote" ,perl-string-shellquote)
1413 ("perl-sub-exporter" ,perl-sub-exporter)
1414 ("perl-template-tiny" ,perl-template-tiny)
1415 ("perl-template-toolkit" ,perl-template-toolkit)
1416 ("perl-throwable" ,perl-throwable)
1417 ("perl-try-tiny" ,perl-try-tiny)
1418 ("perl-type-tiny" ,perl-type-tiny)
1419 ("perl-type-tiny-xs" ,perl-type-tiny-xs)
1420 ("perl-uri" ,perl-uri)
1421 ("perl-uri-db" ,perl-uri-db)))
1422 (home-page "https://sqitch.org/")
1423 (synopsis "Database change management tool")
1425 "Sqitch is a standalone change management system for database schemas,
1426 which uses SQL to describe changes.")
1427 (license license:x11)))
1429 (define-public sqlcrush
1430 ;; Unfortunately, there is no proper upstream release and may never be.
1431 (let ((commit "b5f6868f189566a26eecc78d0f0659813c1aa98a")
1435 (version (git-version "0.1.5" revision commit))
1439 (url "https://github.com/coffeeandscripts/sqlcrush")
1441 (file-name (git-file-name name version))
1444 "0x3wy40r93p0jv3nbwj9a77wa4ff697d13r0wffmm7q9h3mzsww8"))))
1445 (build-system python-build-system)
1447 `(("python-cryptography" ,python-cryptography)
1448 ("python-psycopg2" ,python-psycopg2)
1449 ("python-pymysql" ,python-pymysql)
1450 ("python-sqlalchemy" ,python-sqlalchemy)))
1451 (home-page "https://github.com/coffeeandscripts/sqlcrush")
1452 (synopsis "Text console-based database viewer and editor")
1454 "SQLcrush lets you view and edit a database directly from the text
1455 console through an ncurses interface. You can explore each table's structure,
1456 browse and edit the contents, add and delete entries, all while tracking your
1458 (license license:gpl3+)))) ; no headers, see README.md
1466 (uri (string-append "https://www.samba.org/ftp/tdb/tdb-"
1470 "06waz0k50c7v3chd08mzp2rv7w4k4q9isbxx3vhlfpx1vy9q61f8"))))
1471 (build-system gnu-build-system)
1474 (modify-phases %standard-phases
1476 (lambda* (#:key outputs #:allow-other-keys)
1477 (let ((out (assoc-ref outputs "out")))
1478 ;; The 'configure' script is a wrapper for Waf and
1479 ;; doesn't recognize things like '--enable-fast-install'.
1480 (invoke "./configure"
1481 (string-append "--prefix=" out))))))))
1483 `(;; TODO: Build the documentation.
1484 ;; ("docbook-xsl" ,docbook-xsl)
1485 ;; ("libxml2" ,libxml2)
1486 ;; ("libxslt" ,libxslt)
1487 ("python" ,python) ;for the Waf build system
1489 (home-page "https://tdb.samba.org/")
1490 (synopsis "Trivial database")
1492 "TDB is a Trivial Database. In concept, it is very much like GDBM,
1493 and BSD's DB except that it allows multiple simultaneous writers and uses
1494 locking internally to keep writers from trampling on each other. TDB is also
1496 (license license:lgpl3+)))
1498 (define-public perl-dbi
1505 "mirror://cpan/authors/id/T/TI/TIMB/DBI-"
1509 "1yinx39960y241vf2sknxj0dfz82a5m9gvklq5rw78k0nlyrjawa"))))
1510 (build-system perl-build-system)
1511 (synopsis "Database independent interface for Perl")
1512 (description "This package provides an database interface for Perl.")
1513 (home-page "https://metacpan.org/release/DBI")
1514 (license license:perl-license)))
1516 (define-public perl-dbix-class
1518 (name "perl-dbix-class")
1519 (version "0.082842")
1523 (uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
1524 "DBIx-Class-" version ".tar.gz"))
1526 (base32 "1rh7idjjbibc1zmiaaarask434lh0lx7f2xyfwmy37k9fa0xcpmh"))))
1527 (build-system perl-build-system)
1529 `(("perl-dbd-sqlite" ,perl-dbd-sqlite)
1530 ("perl-file-temp" ,perl-file-temp)
1531 ("perl-module-install" ,perl-module-install)
1532 ("perl-package-stash" ,perl-package-stash)
1533 ("perl-test-deep" ,perl-test-deep)
1534 ("perl-test-exception" ,perl-test-exception)
1535 ("perl-test-warn" ,perl-test-warn)))
1537 `(("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
1538 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
1539 ("perl-class-inspector" ,perl-class-inspector)
1540 ("perl-config-any" ,perl-config-any)
1541 ("perl-context-preserve" ,perl-context-preserve)
1542 ("perl-data-dumper-concise" ,perl-data-dumper-concise)
1543 ("perl-data-page" ,perl-data-page)
1544 ("perl-dbi" ,perl-dbi)
1545 ("perl-devel-globaldestruction" ,perl-devel-globaldestruction)
1546 ("perl-hash-merge" ,perl-hash-merge)
1547 ("perl-module-find" ,perl-module-find)
1548 ("perl-moo" ,perl-moo)
1549 ("perl-mro-compat" ,perl-mro-compat)
1550 ("perl-namespace-clean" ,perl-namespace-clean)
1551 ("perl-path-class" ,perl-path-class)
1552 ("perl-scalar-list-utils" ,perl-scalar-list-utils)
1553 ("perl-scope-guard" ,perl-scope-guard)
1554 ("perl-sql-abstract-classic" ,perl-sql-abstract-classic)
1555 ("perl-sub-name" ,perl-sub-name)
1556 ("perl-text-balanced" ,perl-text-balanced)
1557 ("perl-try-tiny" ,perl-try-tiny)))
1558 (home-page "https://metacpan.org/release/DBIx-Class")
1559 (synopsis "Extensible and flexible object <-> relational mapper")
1560 (description "An SQL to OO mapper with an object API inspired by
1561 Class::DBI (with a compatibility layer as a springboard for porting) and a
1562 resultset API that allows abstract encapsulation of database operations. It
1563 aims to make representing queries in your code as perl-ish as possible while
1564 still providing access to as many of the capabilities of the database as
1565 possible, including retrieving related records from multiple tables in a
1566 single query, \"JOIN\", \"LEFT JOIN\", \"COUNT\", \"DISTINCT\", \"GROUP BY\",
1567 \"ORDER BY\" and \"HAVING\" support.")
1568 (license license:perl-license)))
1570 (define-public perl-dbix-class-cursor-cached
1572 (name "perl-dbix-class-cursor-cached")
1573 (version "1.001004")
1577 (uri (string-append "mirror://cpan/authors/id/A/AR/ARCANEZ/"
1578 "DBIx-Class-Cursor-Cached-" version ".tar.gz"))
1581 "09b2jahn2x12qm4f7qm1jzsxbz7qn1czp6a3fnl5l2i3l4r5421p"))))
1582 (build-system perl-build-system)
1584 `(("perl-cache-cache" ,perl-cache-cache)
1585 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1586 ("perl-module-install" ,perl-module-install)))
1588 `(("perl-carp-clan" ,perl-carp-clan)
1589 ("perl-dbix-class" ,perl-dbix-class)))
1590 (home-page "https://metacpan.org/release/DBIx-Class-Cursor-Cached")
1591 (synopsis "Cursor with built-in caching support")
1592 (description "DBIx::Class::Cursor::Cached provides a cursor class with
1593 built-in caching support.")
1594 (license license:perl-license)))
1596 (define-public perl-dbix-class-introspectablem2m
1598 (name "perl-dbix-class-introspectablem2m")
1599 (version "0.001002")
1603 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
1604 "DBIx-Class-IntrospectableM2M-" version ".tar.gz"))
1607 "1w47rh2241iy5x3a9bqsyd5kdp9sk43dksr99frzv4qn4jsazfn6"))))
1608 (build-system perl-build-system)
1610 `(("perl-module-install" ,perl-module-install)))
1612 `(("perl-dbix-class" ,perl-dbix-class)))
1613 (home-page "https://metacpan.org/release/DBIx-Class-IntrospectableM2M")
1614 (synopsis "Introspect many-to-many relationships")
1615 (description "Because the many-to-many relationships are not real
1616 relationships, they can not be introspected with DBIx::Class. Many-to-many
1617 relationships are actually just a collection of convenience methods installed
1618 to bridge two relationships. This DBIx::Class component can be used to store
1619 all relevant information about these non-relationships so they can later be
1620 introspected and examined.")
1621 (license license:perl-license)))
1623 (define-public perl-dbix-class-schema-loader
1625 (name "perl-dbix-class-schema-loader")
1630 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
1631 "DBIx-Class-Schema-Loader-" version ".tar.gz"))
1634 "0r57fv71ypxafb85cpxph1hdqii7ipjwvc19yb6fpkvq2ggcssg8"))))
1635 (build-system perl-build-system)
1637 `(("perl-config-any" ,perl-config-any)
1638 ("perl-config-general" ,perl-config-general)
1639 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1640 ("perl-dbix-class-introspectablem2m" ,perl-dbix-class-introspectablem2m)
1641 ("perl-module-install" ,perl-module-install)
1642 ("perl-moose" ,perl-moose)
1643 ("perl-moosex-markasmethods" ,perl-moosex-markasmethods)
1644 ("perl-moosex-nonmoose" ,perl-moosex-nonmoose)
1645 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
1646 ("perl-test-deep" ,perl-test-deep)
1647 ("perl-test-differences" ,perl-test-differences)
1648 ("perl-test-exception" ,perl-test-exception)
1649 ("perl-test-pod" ,perl-test-pod)
1650 ("perl-test-warn" ,perl-test-warn)))
1652 `(("perl-class-unload" ,perl-class-unload)
1653 ("perl-class-inspector" ,perl-class-inspector)
1654 ("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
1655 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
1656 ("perl-carp-clan" ,perl-carp-clan)
1657 ("perl-data-dump" ,perl-data-dump)
1658 ("perl-dbix-class" ,perl-dbix-class)
1659 ("perl-hash-merge" ,perl-hash-merge)
1660 ("perl-list-moreutils" ,perl-list-moreutils)
1661 ("perl-lingua-en-inflect-phrase" ,perl-lingua-en-inflect-phrase)
1662 ("perl-lingua-en-inflect-number" ,perl-lingua-en-inflect-number)
1663 ("perl-lingua-en-tagger" ,perl-lingua-en-tagger)
1664 ("perl-namespace-clean" ,perl-namespace-clean)
1665 ("perl-mro-compat" ,perl-mro-compat)
1666 ("perl-scope-guard" ,perl-scope-guard)
1667 ("perl-string-camelcase" ,perl-string-camelcase)
1668 ("perl-string-toidentifier-en" ,perl-string-toidentifier-en)
1669 ("perl-sub-name" ,perl-sub-name)
1670 ("perl-try-tiny" ,perl-try-tiny)))
1671 (arguments `(#:tests? #f)) ;TODO: t/20invocations.t fails
1672 (home-page "https://metacpan.org/release/DBIx-Class-Schema-Loader")
1673 (synopsis "Create a DBIx::Class::Schema based on a database")
1674 (description "DBIx::Class::Schema::Loader automates the definition of a
1675 DBIx::Class::Schema by scanning database table definitions and setting up the
1676 columns, primary keys, unique constraints and relationships.")
1677 (license license:perl-license)))
1679 (define-public perl-dbd-pg
1681 (name "perl-dbd-pg")
1686 (uri (string-append "mirror://cpan/authors/id/T/TU/TURNSTEP/"
1687 "DBD-Pg-" version ".tar.gz"))
1690 "0gkqlvbmzbdm0g4k328nlkjdg3wrjm5i2n9jxj1i8sqxkm79rylz"))))
1691 (build-system perl-build-system)
1693 `(("perl-dbi" ,perl-dbi)))
1695 `(("perl-dbi" ,perl-dbi)
1696 ("postgresql" ,postgresql)))
1697 (home-page "https://metacpan.org/release/DBD-Pg")
1698 (synopsis "DBI PostgreSQL interface")
1699 (description "This package provides a PostgreSQL driver for the Perl5
1700 @dfn{Database Interface} (DBI).")
1701 (license license:perl-license)))
1703 (define-public perl-dbd-mysql
1705 (name "perl-dbd-mysql")
1710 (uri (string-append "mirror://cpan/authors/id/D/DV/DVEEDEN/"
1711 "DBD-mysql-" version ".tar.gz"))
1713 (base32 "0y4djb048i09dk19av7mzfb3khr72vw11p3ayw2p82jsy4gm8j2g"))))
1714 (build-system perl-build-system)
1717 (modify-phases %standard-phases
1718 (add-before 'configure 'skip-library-detection
1719 ;; Avoid depencies on perl-devel-checklib, openssl, and zlib. They
1720 ;; are really only needed for the test suite; their absence does not
1721 ;; affect the build or the end result.
1723 (substitute* "Makefile.PL"
1724 (("use Devel::CheckLib;" match)
1725 (string-append "# " match))
1729 ;; Tests require running MySQL server.
1732 `(("perl-dbi" ,perl-dbi)
1733 ("mysql" ,mariadb "lib")
1734 ("mysql-dev" ,mariadb "dev")))
1735 (home-page "https://metacpan.org/release/DBD-mysql")
1736 (synopsis "DBI MySQL interface")
1737 (description "This package provides a MySQL driver for the Perl5
1738 @dfn{Database Interface} (DBI).")
1739 (license license:perl-license)))
1741 (define-public perl-dbd-sqlite
1743 (name "perl-dbd-sqlite")
1748 "mirror://cpan/authors/id/I/IS/ISHIGAKI/DBD-SQLite-"
1752 "1zljln5nh61gj3k22a1fv2vhx5l83waizmarwkh77hk6kzzmvrw9"))))
1753 (build-system perl-build-system)
1754 (inputs `(("sqlite" ,sqlite)))
1755 (propagated-inputs `(("perl-dbi" ,perl-dbi)))
1756 (synopsis "SQlite interface for Perl")
1757 (description "DBD::SQLite is a Perl DBI driver for SQLite, that includes
1758 the entire thing in the distribution. So in order to get a fast transaction
1759 capable RDBMS working for your Perl project you simply have to install this
1760 module, and nothing else.")
1761 (license license:perl-license)
1762 (home-page "https://metacpan.org/release/DBD-SQLite")))
1764 (define-public perl-mysql-config
1766 (name "perl-mysql-config")
1772 "mirror://cpan/authors/id/D/DA/DARREN/MySQL-Config-"
1777 "1svn7ccw2gc4cazvc58j84rxhnc9vs01zpird0l8460598j475qr"))))
1778 (build-system perl-build-system)
1779 (home-page "https://metacpan.org/release/MySQL-Config")
1780 (synopsis "Parse and utilize MySQL's /etc/my.cnf and ~/.my.cnf files")
1782 "@code{MySQL::Config} emulates the @code{load_defaults} function from
1783 libmysqlclient. It will fill an array with long options, ready to be parsed by
1784 @code{Getopt::Long}.")
1785 (license license:perl-license)))
1787 (define-public perl-sql-abstract
1789 (name "perl-sql-abstract")
1794 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
1795 "SQL-Abstract-" version ".tar.gz"))
1797 (base32 "0jhw91b23wc9bkfwcgvka4x5ddxk58m9bcp5ay7a3vx77nla09p9"))))
1798 (build-system perl-build-system)
1800 `(("perl-module-install" ,perl-module-install)
1801 ("perl-test-deep" ,perl-test-deep)
1802 ("perl-test-exception" ,perl-test-exception)
1803 ("perl-test-warn" ,perl-test-warn)))
1805 `(("perl-hash-merge" ,perl-hash-merge)
1806 ("perl-moo" ,perl-moo)
1807 ("perl-mro-compat" ,perl-mro-compat)
1808 ("perl-text-balanced" ,perl-text-balanced)))
1809 (home-page "https://metacpan.org/release/SQL-Abstract")
1810 (synopsis "Generate SQL from Perl data structures")
1811 (description "This module was inspired by the excellent DBIx::Abstract.
1812 While based on the concepts used by DBIx::Abstract, the concepts used have
1813 been modified to make the SQL easier to generate from Perl data structures.
1814 The underlying idea is for this module to do what you mean, based on the data
1815 structures you provide it, so that you don't have to modify your code every
1816 time your data changes.")
1817 (license license:perl-license)))
1819 (define-public perl-sql-abstract-classic
1821 (name "perl-sql-abstract-classic")
1826 (uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
1827 "SQL-Abstract-Classic-" version ".tar.gz"))
1829 (base32 "0a7g13hs3kdxrjn43sfli09mgsi9d6w0dfw6hlk268av17yisgaf"))))
1830 (build-system perl-build-system)
1832 `(("perl-test-deep" ,perl-test-deep)
1833 ("perl-test-exception" ,perl-test-exception)
1834 ("perl-test-warn" ,perl-test-warn)))
1836 `(("perl-mro-compat" ,perl-mro-compat)
1837 ("perl-sql-abstract" ,perl-sql-abstract)))
1838 (home-page "https://metacpan.org/release/SQL-Abstract-Classic")
1839 (synopsis "Generate SQL from Perl data structures")
1841 "This module is nearly identical to @code{SQL::Abstract} 1.81, and exists
1842 to preserve the ability of users to opt into the new way of doing things in
1843 later versions according to their own schedules.
1845 It is an abstract SQL generation module based on the concepts used by
1846 @code{DBIx::Abstract}, with several important differences, especially when it
1847 comes to @code{WHERE} clauses. These concepts were modified to make the SQL
1848 easier to generate from Perl data structures.
1850 The underlying idea is for this module to do what you mean, based on the data
1851 structures you provide it. You shouldn't have to modify your code every time
1852 your data changes, as this module figures it out.")
1853 (license license:perl-license)))
1855 (define-public perl-sql-splitstatement
1857 (name "perl-sql-splitstatement")
1862 (uri (string-append "mirror://cpan/authors/id/E/EM/EMAZEP/"
1863 "SQL-SplitStatement-" version ".tar.gz"))
1866 "0bqg45k4c9qkb2ypynlwhpvzsl4ssfagmsalys18s5c79ps30z7p"))))
1867 (build-system perl-build-system)
1869 `(("perl-test-exception" ,perl-test-exception)))
1871 `(("perl-class-accessor" ,perl-class-accessor)
1872 ("perl-list-moreutils" ,perl-list-moreutils)
1873 ("perl-regexp-common" ,perl-regexp-common)
1874 ("perl-sql-tokenizer" ,perl-sql-tokenizer)))
1875 (home-page "https://metacpan.org/release/SQL-SplitStatement")
1876 (synopsis "Split SQL code into atomic statements")
1877 (description "This module tries to split any SQL code, even including
1878 non-standard extensions, into the atomic statements it is composed of.")
1879 (license license:perl-license)))
1881 (define-public perl-sql-tokenizer
1883 (name "perl-sql-tokenizer")
1888 (uri (string-append "mirror://cpan/authors/id/I/IZ/IZUT/"
1889 "SQL-Tokenizer-" version ".tar.gz"))
1892 "1qa2dfbzdlr5qqdam9yn78z5w3al5r8577x06qan8wv58ay6ka7s"))))
1893 (build-system perl-build-system)
1894 (home-page "https://metacpan.org/release/SQL-Tokenizer")
1895 (synopsis "SQL tokenizer")
1896 (description "SQL::Tokenizer is a tokenizer for SQL queries. It does not
1897 claim to be a parser or query verifier. It just creates sane tokens from a
1899 (license license:perl-license)))
1901 (define-public unixodbc
1909 "ftp://ftp.unixodbc.org/pub/unixODBC/unixODBC-"
1912 (base32 "0xry3sg497wly8f7715a7gwkn2k36bcap0mvzjw74jj53yx6kwa5"))))
1913 (build-system gnu-build-system)
1914 (synopsis "Data source abstraction library")
1915 (description "Unixodbc is a library providing an API with which to access
1916 data sources. Data sources include SQL Servers and any software with an ODBC
1918 (license license:lgpl2.1+)
1919 ;; COPYING contains copy of lgpl2.1 - but copyright notices just say "LGPL"
1920 (home-page "http://www.unixodbc.org")))
1922 (define-public unqlite
1928 ;; Contains bug fixes against the official release, and has an
1929 ;; autotooled build system.
1930 (uri (string-append "https://github.com/aidin36/tocc/releases/"
1932 "unqlite-unofficial-" version ".tar.gz"))
1935 "1sbpvhg15gadq0mpcy16q7k3rkg4b4dicpnn5xifpkpn02sqik3s"))))
1936 (build-system gnu-build-system)
1937 (arguments `(#:tests? #f)) ;No check target
1938 (home-page "https://www.unqlite.org")
1939 (synopsis "In-memory key/value and document store")
1941 "UnQLite is an in-process software library which implements a
1942 self-contained, serverless, zero-configuration, transactional NoSQL
1943 database engine. UnQLite is a document store database similar to
1944 MongoDB, Redis, CouchDB, etc. as well as a standard Key/Value store
1945 similar to BerkeleyDB, LevelDB, etc.")
1946 (license license:bsd-2)))
1948 (define-public redis
1954 (uri (string-append "http://download.redis.io/releases/redis-"
1958 "0ax8sf3vw0yadr41kzc04917scrg5wir1d94zmbz00b8pzm79nv1"))))
1959 (build-system gnu-build-system)
1961 '(#:tests? #f ; tests related to master/slave and replication fail
1962 #:phases (modify-phases %standard-phases
1963 (delete 'configure))
1964 #:make-flags `("CC=gcc"
1967 ,(string-append "PREFIX="
1968 (assoc-ref %outputs "out")))))
1969 (synopsis "Key-value cache and store")
1970 (description "Redis is an advanced key-value cache and store. Redis
1971 supports many data structures including strings, hashes, lists, sets, sorted
1972 sets, bitmaps and hyperloglogs.")
1973 (home-page "https://redis.io/")
1974 (license license:bsd-3)))
1976 (define-public kyotocabinet
1978 (name "kyotocabinet")
1982 (uri (string-append "https://fallabs.com/kyotocabinet/pkg/"
1983 "kyotocabinet-" version ".tar.gz"))
1986 "1bxkf9kmcavq9rqridb8mvmrk3hj4447ffi24m2admsbm61n6k29"))))
1987 (build-system gnu-build-system)
1991 "--disable-opt" ;"-march=native". XXX this also turns off -O0.
1992 (string-append "LDFLAGS=-Wl,-rpath="
1993 (assoc-ref %outputs "out") "/lib"))))
1994 (inputs `(("zlib" ,zlib)))
1995 (home-page "https://fallabs.com/kyotocabinet/")
1997 "Kyoto Cabinet is a modern implementation of the DBM database")
1999 "Kyoto Cabinet is a standalone file-based database that supports Hash
2000 and B+ Tree data storage models. It is a fast key-value lightweight
2001 database and supports many programming languages. It is a NoSQL database.")
2002 (license license:gpl3+)))
2004 (define-public tokyocabinet
2006 (name "tokyocabinet")
2011 (uri (string-append "http://fallabs.com/tokyocabinet/"
2012 name "-" version ".tar.gz"))
2015 "140zvr0n8kvsl0fbn2qn3f2kh3yynfwnizn4dgbj47m975yg80x0"))))
2016 (build-system gnu-build-system)
2019 (list "--enable-pthread" "--enable-off64" "--enable-fastest"
2020 (string-append "LDFLAGS=-Wl,-rpath="
2021 (assoc-ref %outputs "out") "/lib"))))
2024 (home-page "http://fallabs.com/tokyocabinet/")
2025 (synopsis "Tokyo Cabinet is a modern implementation of the DBM database")
2027 "Tokyo Cabinet is a library of routines for managing a database.
2028 The database is a simple data file containing records, each is a pair of a
2029 key and a value. Every key and value is serial bytes with variable length.
2030 Both binary data and character string can be used as a key and a value.
2031 There is neither concept of data tables nor data types. Records are
2032 organized in hash table, B+ tree, or fixed-length array.")
2033 (license license:lgpl2.1+)))
2035 (define-public wiredtiger
2042 "http://source.wiredtiger.com/releases/wiredtiger-"
2043 version ".tar.bz2"))
2046 "0krwnb2zfbhvjaskwl875qzd3y626s84zcciq2mxr5c5riw3yh6s"))))
2047 (build-system gnu-build-system)
2049 '(#:configure-flags '("--enable-lz4" "--with-builtins=snappy,zlib")
2051 (modify-phases %standard-phases
2052 (add-before 'check 'disable-test/fops
2054 ;; XXX: timed out after 3600 seconds of silence
2055 (substitute* "Makefile"
2061 ("snappy" ,snappy)))
2062 (home-page "http://source.wiredtiger.com/")
2063 (synopsis "NoSQL data engine")
2065 "WiredTiger is an extensible platform for data management. It supports
2066 row-oriented storage (where all columns of a row are stored together),
2067 column-oriented storage (where columns are stored in groups, allowing for
2068 more efficient access and storage of column subsets) and log-structured merge
2069 trees (LSM), for sustained throughput under random insert workloads.")
2070 (license license:gpl3) ; or GPL-2
2071 ;; configure.ac: WiredTiger requires a 64-bit build.
2072 (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))))
2074 (define-public wiredtiger-3
2076 (inherit wiredtiger)
2081 (uri (string-append "http://source.wiredtiger.com/releases/wiredtiger-"
2082 version ".tar.bz2"))
2085 "014awypv579ascg4jbx4pndj2wld337m79yyzrzyr7hxrff139jx"))))))
2087 (define-public guile-wiredtiger
2089 (name "guile-wiredtiger")
2094 (url "https://framagit.org/a-guile-mind/guile-wiredtiger.git")
2095 (commit "340ad4bc2ff4dcc6216a2f5c6f9172ca320ac66b")))
2096 (file-name (string-append name "-" version "-checkout"))
2099 "15j36bvxxzil7qpwlmh1rffqpva3ynvrcpqhhqbj2c9208ayz595"))))
2100 (build-system gnu-build-system)
2102 '(#:parallel-tests? #f ;; tests can't be run in parallel, yet.
2104 (list (string-append "--with-libwiredtiger-prefix="
2105 (assoc-ref %build-inputs "wiredtiger")))
2106 #:make-flags '("GUILE_AUTO_COMPILE=0")))
2108 `(("autoconf" ,autoconf)
2109 ("automake" ,automake)
2110 ("pkg-config" ,pkg-config)))
2112 `(("wiredtiger" ,wiredtiger-3)
2113 ("guile" ,guile-2.2)))
2115 `(("guile-bytestructures" ,guile-bytestructures)))
2116 (synopsis "WiredTiger bindings for GNU Guile")
2118 "This package provides Guile bindings to the WiredTiger ``NoSQL''
2120 (home-page "https://framagit.org/a-guile-mind/guile-wiredtiger")
2121 (license license:gpl3+)))
2123 (define-public perl-db-file
2125 (name "perl-db-file")
2130 (uri (string-append "mirror://cpan/authors/id/P/PM/PMQS/DB_File-"
2133 (base32 "0fv0any5am6vr6h1wcwhnraj70hd55fs4d8c2y7chsc9alf9di5y"))))
2134 (build-system perl-build-system)
2135 (inputs `(("bdb" ,bdb)))
2136 (native-inputs `(("perl-test-pod" ,perl-test-pod)))
2138 `(#:phases (modify-phases %standard-phases
2140 'configure 'modify-config.in
2141 (lambda* (#:key inputs #:allow-other-keys)
2142 (substitute* "config.in"
2143 (("/usr/local/BerkeleyDB") (assoc-ref inputs "bdb")))
2145 (home-page "https://metacpan.org/release/DB_File")
2146 (synopsis "Perl5 access to Berkeley DB version 1.x")
2148 "The DB::File module provides Perl bindings to the Berkeley DB version 1.x.")
2149 (license license:perl-license)))
2159 (url "https://git.openldap.org/openldap/openldap.git")
2160 (commit (string-append "LMDB_" version))))
2161 (file-name (git-file-name name version))
2163 (base32 "0323xwb2rqyrr9vr6gbxc2kl89drhqw0ifmyh9pg9qgqmymyhxdx"))))
2164 (build-system gnu-build-system)
2166 `(#:test-target "test"
2168 (modify-phases %standard-phases
2170 (lambda* (#:key outputs #:allow-other-keys)
2171 (chdir "libraries/liblmdb")
2172 (substitute* "Makefile"
2173 (("/usr/local") (assoc-ref outputs "out")))
2175 (home-page "https://symas.com/lmdb/")
2176 (synopsis "Lightning Memory-Mapped Database library")
2178 "The @dfn{Lightning Memory-Mapped Database} (LMDB) is a high-performance
2179 transactional database. Unlike more complex relational databases, LMDB handles
2180 only key-value pairs (stored as arbitrary byte arrays) and relies on the
2181 underlying operating system for caching and locking, keeping the code small and
2183 The use of ‘zero-copy’ memory-mapped files combines the persistence of classic
2184 disk-based databases with high read performance that scales linearly over
2185 multiple cores. The size of each database is limited only by the size of the
2186 virtual address space — not physical RAM.")
2187 (license license:openldap2.8)))
2189 (define-public lmdbxx
2192 (version "0.9.14.0")
2197 (url "https://github.com/drycpp/lmdbxx")
2199 (file-name (git-file-name name version))
2201 (base32 "1jmb9wg2iqag6ps3z71bh72ymbcjrb6clwlkgrqf1sy80qwvlsn6"))))
2204 (list (string-append "PREFIX=" (assoc-ref %outputs "out")))
2206 (modify-phases %standard-phases
2207 (delete 'configure))))
2208 (build-system gnu-build-system)
2209 (inputs `(("lmdb" ,lmdb)))
2210 (home-page "http://lmdbxx.sourceforge.net")
2211 (synopsis "C++11 wrapper for the LMDB embedded B+ tree database library")
2212 (description "@code{lmdbxx} is a comprehensive @code{C++} wrapper for the
2213 @code{LMDB} embedded database library, offering both an error-checked
2214 procedural interface and an object-oriented resource interface with RAII
2216 (license license:unlicense)))
2218 (define-public libpqxx
2225 "http://pqxx.org/download/software/libpqxx/"
2226 name "-" version ".tar.gz"))
2229 "0f6wxspp6rx12fkasanb0z2g2gc8dhcfwnxagx8wwqbpg6ifsz09"))))
2230 (build-system gnu-build-system)
2232 `(("python" ,python-2)))
2233 (inputs `(("postgresql" ,postgresql)))
2235 `(#:tests? #f ; # FAIL: 1
2237 (modify-phases %standard-phases
2238 (add-before 'configure 'fix-sed-command
2240 ;; Newer sed versions error out if double brackets are not used.
2241 (substitute* "configure"
2242 (("\\[:space:\\]") "[[:space:]]"))
2244 (synopsis "C++ connector for PostgreSQL")
2246 "Libpqxx is a C++ library to enable user programs to communicate with the
2247 PostgreSQL database back-end. The database back-end can be local or it may be
2248 on another machine, accessed via TCP/IP.")
2249 (home-page "http://pqxx.org/")
2250 (license license:bsd-3)))
2252 (define-public python-peewee
2254 (name "python-peewee")
2259 (uri (pypi-uri "peewee" version))
2262 "1j4sh946k0736m7pd54z0y6i2hjhgg3kdllx1pwq8xkzzcgrx1xw"))))
2263 (build-system python-build-system)
2265 `(#:tests? #f)) ; Fails to import test data
2267 `(("python-cython" ,python-cython)))
2268 (home-page "https://github.com/coleifer/peewee/")
2269 (synopsis "Small object-relational mapping utility")
2271 "Peewee is a simple and small ORM (object-relation mapping) tool. Peewee
2272 handles converting between pythonic values and those used by databases, so you
2273 can use Python types in your code without having to worry. It has built-in
2274 support for sqlite, mysql and postgresql. If you already have a database, you
2275 can autogenerate peewee models using @code{pwiz}, a model generator.")
2276 (license license:expat)))
2278 (define-public python2-peewee
2279 (package-with-python2 python-peewee))
2281 (define-public python-tortoise-orm
2283 (name "python-tortoise-orm")
2288 (uri (pypi-uri "tortoise-orm" version))
2291 "0wr7p4v0b16ypm9fcpwpl99kf491m6w3jkd13xcsgq13fy73fbqc"))))
2292 (build-system python-build-system)
2293 ;; Disable tests for now. They pull in a lot of dependencies.
2294 (arguments `(#:tests? #f))
2296 `(("python-asynctest" ,python-asynctest)
2297 ("python-nose2" ,python-nose2)))
2299 `(("python-aiosqlite" ,python-aiosqlite)
2300 ("python-pypika" ,python-pypika)
2301 ("python-ciso8601" ,python-ciso8601)
2302 ("python-typing-extensions"
2303 ,python-typing-extensions)))
2305 "https://github.com/tortoise/tortoise-orm")
2307 "Easy async ORM for python, built with relations in mind")
2309 "Tortoise ORM is an easy-to-use asyncio ORM (Object Relational Mapper)
2310 inspired by Django. Tortoise ORM was build with relations in mind and
2311 admiration for the excellent and popular Django ORM. It’s engraved in its
2312 design that you are working not with just tables, you work with relational
2314 (license license:asl2.0)))
2316 (define-public sqlcipher
2323 (uri (string-append "https://github.com/sqlcipher/" name
2324 "/archive/v" version ".tar.gz"))
2326 (base32 "1nxarwbci8jx99f1d0y1ivxcv25s78l1p7q6qy28lkpkcx8pm2b9"))
2327 (file-name (string-append name "-" version ".tar.gz"))))
2328 (build-system gnu-build-system)
2330 `(("libcrypto" ,openssl)
2331 ("libtcl8.6" ,tcl))) ; required for running the tests
2336 '("--enable-tempstore=yes"
2337 "CFLAGS=-DSQLITE_HAS_CODEC -DSQLITE_ENABLE_FTS3"
2338 "LDFLAGS=-lcrypto -ltcl8.6"
2340 ;; tests cannot be run from the Makefile
2341 ;; see: <https://github.com/sqlcipher/sqlcipher/issues/172>
2342 #:test-target "testfixture"
2344 (modify-phases %standard-phases
2345 (add-before 'check 'build-test-runner
2346 (assoc-ref %standard-phases 'check))
2349 (invoke "./testfixture" "test/crypto.test"))))))
2350 (home-page "https://www.zetetic.net/sqlcipher/")
2352 "Library providing transparent encryption of SQLite database files")
2353 (description "SQLCipher is an implementation of SQLite, extended to
2354 provide transparent 256-bit AES encryption of database files. Pages are
2355 encrypted before being written to disk and are decrypted when read back. It’s
2356 well suited for protecting embedded application databases and for mobile
2359 ;; src/{crypto.c,crypto_impl.c,crypto.h,crypto_cc.c,crypto_libtomcrypt.c},
2360 ;; src/{crypto_openssl.c,sqlcipher.h}, tool/crypto-speedtest.tcl,
2361 ;; test/crypto.test are licensed under a 3-clause BSD license. All other
2362 ;; source files are in the public domain.
2363 (license (list license:public-domain license:bsd-3))))
2365 (define-public python-pyodbc-c
2367 (name "python-pyodbc-c")
2372 (uri (string-append "https://gitlab.com/daym/pyodbc-c/repository/"
2373 "archive.tar.gz?ref=v" version))
2376 "05aq2297k779xidmxcwkrrxjvj1bh2q7d9a1rcjv6zr15y764ga9"))
2377 (file-name (string-append name "-" version ".tar.gz"))))
2378 (build-system python-build-system)
2380 `(("unixodbc" ,unixodbc)))
2382 `(;; No unit tests exist.
2384 (home-page "https://github.com/mkleehammer/pyodbc")
2385 (synopsis "Python ODBC Library")
2386 (description "@code{python-pyodbc-c} provides a Python DB-API driver
2388 (license (license:x11-style "file://LICENSE.TXT"))))
2390 (define-public python2-pyodbc-c
2391 (package-with-python2 python-pyodbc-c))
2393 (define-public python-pyodbc
2395 (name "python-pyodbc")
2400 (uri (pypi-uri "pyodbc" version))
2402 (base32 "0skjpraar6hcwsy82612bpj8nw016ncyvvq88j5syrikxgp5saw5"))
2403 (file-name (string-append name "-" version ".tar.gz"))))
2404 (build-system python-build-system)
2406 `(("unixodbc" ,unixodbc)))
2408 `(#:tests? #f)) ; no unit tests exist
2409 (home-page "https://github.com/mkleehammer/pyodbc")
2410 (synopsis "Python ODBC Library")
2411 (description "@code{python-pyodbc} provides a Python DB-API driver
2413 (license (license:x11-style "file:///LICENSE.TXT"))))
2415 (define-public python2-pyodbc
2416 (package-with-python2 python-pyodbc))
2418 (define-public mdbtools
2426 (url "https://github.com/brianb/mdbtools")
2428 (file-name (git-file-name name version))
2431 "0gwcpp9y09xhs21g7my2fs8ncb8i6ahlyixcx8jd3q97jbzj441l"))))
2432 (build-system gnu-build-system)
2436 `(("autoconf" ,autoconf)
2437 ("automake" ,automake)
2438 ("libtool" ,libtool)
2439 ("pkg-config" ,pkg-config)
2440 ("txt2man" ,txt2man)
2442 (home-page "http://mdbtools.sourceforge.net/")
2443 (synopsis "Read Microsoft Access databases")
2444 (description "MDB Tools is a set of tools and applications to read the
2445 proprietary MDB file format used in Microsoft's Access database package. This
2446 includes programs to export schema and data from Microsoft's Access database
2447 file format to other databases such as MySQL, Oracle, Sybase, PostgreSQL,
2448 etc., and an SQL engine for performing simple SQL queries.")
2449 (license (list license:lgpl2.0
2452 (define-public python-lmdb
2454 (name "python-lmdb")
2458 (uri (pypi-uri "lmdb" version))
2461 "12fwlzfd82471ss9xzbqwcqc6f5miy51y72y2yya9j5cm9589szr"))
2462 (modules '((guix build utils)))
2464 ;; Delete bundled lmdb source files.
2466 (for-each delete-file (list "lib/lmdb.h"
2471 (build-system python-build-system)
2476 (modify-phases %standard-phases
2477 (add-before 'build 'use-system-lmdb
2478 (lambda* (#:key inputs #:allow-other-keys)
2479 (let ((lmdb (assoc-ref inputs "lmdb")))
2480 (setenv "LMDB_FORCE_SYSTEM" "set")
2481 (setenv "LMDB_INCLUDEDIR" (string-append lmdb "/include"))
2482 (setenv "LMDB_LIBDIR" (string-append lmdb "/lib"))
2484 ;; Tests fail with: ‘lmdb.tool: Please specify environment (--env)’.
2486 (home-page "https://github.com/dw/py-lmdb")
2487 (synopsis "Python binding for the ‘Lightning’ database (LMDB)")
2489 "python-lmdb or py-lmdb is a Python binding for the @dfn{Lightning
2490 Memory-Mapped Database} (LMDB), a high-performance key-value store.")
2492 (list license:openldap2.8
2493 ;; ‘lib/win32/inttypes.h’ and ‘lib/win32-stdint/stdint.h’ are BSD-3,
2494 ;; but not actually needed on platforms currently supported by Guix.
2497 (define-public python-orator
2499 (name "python-orator")
2503 (uri (pypi-uri "orator" version))
2506 "0mbgybz63ryhr9p1f4glnls5c57jp6il3dw0kf97f3pj80687rvg"))))
2507 (build-system python-build-system)
2508 ;; FIXME: Tests are not distributed with PyPI, and the repository
2509 ;; does not contain setup.py. How to test?
2510 (arguments '(#:tests? #f))
2512 `(("python-backpack" ,python-backpack)
2513 ("python-blinker" ,python-blinker)
2514 ("python-cleo" ,python-cleo)
2515 ("python-faker" ,python-faker)
2516 ("python-inflection" ,python-inflection)
2517 ("python-lazy-object-proxy" ,python-lazy-object-proxy)
2518 ("python-pendulum" ,python-pendulum)
2519 ("python-pyaml" ,python-pyaml)
2520 ("python-pygments" ,python-pygments)
2521 ("python-pyyaml" ,python-pyyaml)
2522 ("python-simplejson" ,python-simplejson)
2523 ("python-six" ,python-six)
2524 ("python-wrapt" ,python-wrapt)))
2525 (home-page "https://orator-orm.com/")
2526 (synopsis "ActiveRecord ORM for Python")
2528 "Orator provides a simple ActiveRecord-like Object Relational Mapping
2529 implementation for Python.")
2530 (license license:expat)
2531 (properties `((python2-variant . ,(delay python2-orator))))))
2533 (define-public python2-orator
2534 (package-with-python2 (strip-python2-variant python-orator)))
2536 (define-public virtuoso-ose
2538 (name "virtuoso-ose")
2544 "https://github.com/openlink/virtuoso-opensource/releases/"
2545 "download/v" version "/virtuoso-opensource-" version ".tar.gz"))
2547 (base32 "0r1xakclkfi69pzh8z2k16z3x0m49pxp764icj0ad4w4bb97fr42"))))
2548 (build-system gnu-build-system)
2550 `(#:tests? #f ; Tests require a network connection.
2551 ;; TODO: Removing the libsrc/zlib source directory breaks the build.
2552 ;; This indicates that the internal zlib code may still be used.
2553 #:configure-flags '("--without-internal-zlib"
2555 "--enable-static=no")
2557 (modify-phases %standard-phases
2558 ;; Even with "--enable-static=no", "libvirtuoso-t.a" is left in
2559 ;; the build output. The following phase removes it.
2560 (add-after 'install 'remove-static-libs
2561 (lambda* (#:key outputs #:allow-other-keys)
2562 (let ((lib (string-append (assoc-ref outputs "out") "/lib")))
2563 (for-each (lambda (file)
2564 (delete-file (string-append lib "/" file)))
2566 "libvirtuoso-t.la"))))))))
2568 `(("openssl" ,openssl-1.0)
2569 ("net-tools" ,net-tools)
2570 ("readline" ,readline)
2572 (home-page "http://vos.openlinksw.com/owiki/wiki/VOS/")
2573 (synopsis "Multi-model database system")
2574 (description "Virtuoso is a scalable cross-platform server that combines
2575 relational, graph, and document data management with web application server
2576 and web services platform functionality.")
2577 ;; configure: error: ... can only be build on 64bit platforms
2578 (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))
2579 (license license:gpl2)))
2581 (define-public python-ccm
2588 (uri (pypi-uri "ccm" version))
2591 "177dfxsmk3k4cih6fh6v8d91bh4nqx7ns6pc07w7m7i3cvdx3c8n"))))
2592 (build-system python-build-system)
2594 `(("python-pyyaml" ,python-pyyaml)
2595 ;; Not listed in setup.py, but used in ccmlib/node.py for full
2597 ("python-psutil" ,python-psutil)
2598 ("python-six" ,python-six)))
2599 (home-page "https://github.com/pcmanus/ccm")
2600 (synopsis "Cassandra Cluster Manager for Apache Cassandra clusters on
2602 (description "Cassandra Cluster Manager is a development tool for testing
2603 local Cassandra clusters. It creates, launches and removes Cassandra clusters
2605 (license license:asl2.0)))
2607 (define-public python2-ccm
2608 (package-with-python2 python-ccm))
2610 (define-public python2-pysqlite
2612 (name "python2-pysqlite")
2617 (uri (pypi-uri "pysqlite" version))
2620 "1424gwq9sil2ffmnizk60q36vydkv8rxs6m7xs987kz8cdc37lqp"))))
2621 (build-system python-build-system)
2623 `(("sqlite" ,sqlite)))
2625 `(#:python ,python-2 ; incompatible with Python 3
2626 #:tests? #f)) ; no test target
2627 (home-page "https://github.com/ghaering/pysqlite")
2628 (synopsis "SQLite bindings for Python")
2630 "Pysqlite provides SQLite bindings for Python that comply to the
2631 Database API 2.0T.")
2632 (license license:zlib)))
2634 (define-public python-sqlalchemy
2636 (name "python-sqlalchemy")
2641 (uri (pypi-uri "SQLAlchemy" version))
2643 (base32 "1rwc6ss1cnz3kxx0p9p6xw0w79r8qw03lcc29k31yb3rcigvfbys"))))
2644 (build-system python-build-system)
2646 `(("python-cython" ,python-cython) ; for C extensions
2647 ("python-pytest" ,python-pytest)
2648 ("python-mock" ,python-mock))) ; for tests
2651 (modify-phases %standard-phases
2653 (lambda _ (invoke "py.test"))))))
2654 (home-page "https://www.sqlalchemy.org")
2655 (synopsis "Database abstraction library")
2657 "SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that
2658 gives application developers the full power and flexibility of SQL. It
2659 provides a full suite of well known enterprise-level persistence patterns,
2660 designed for efficient and high-performing database access, adapted into a
2661 simple and Pythonic domain language.")
2662 (license license:x11)))
2664 (define-public python2-sqlalchemy
2665 (package-with-python2 python-sqlalchemy))
2667 (define-public python-sqlalchemy-utils
2669 (name "python-sqlalchemy-utils")
2674 (uri (pypi-uri "SQLAlchemy-Utils" version))
2677 "1myn71dn8j74xglyh46f12sh8ywb7j0j732rzwq70kvwwnq32m73"))))
2678 (build-system python-build-system)
2680 '(#:tests? #f)) ; FIXME: Many tests require a running database server.
2682 ;; (modify-phases %standard-phases
2685 ;; (zero? (system* "py.test" "sqlalchemy_utils" "tests")))))
2687 `(("python-six" ,python-six)
2688 ("python-sqlalchemy" ,python-sqlalchemy)))
2690 `(("python-dateutil" ,python-dateutil)
2691 ("python-flexmock" ,python-flexmock)
2692 ("python-psycopg2" ,python-psycopg2)
2693 ("python-pytest" ,python-pytest)
2694 ("python-pytz" ,python-pytz)))
2695 (home-page "https://github.com/kvesteri/sqlalchemy-utils")
2696 (synopsis "Various utility functions for SQLAlchemy")
2698 "SQLAlchemy-utils provides various utility functions and custom data types
2699 for SQLAlchemy. SQLAlchemy is an SQL database abstraction library for Python.
2701 You might also want to install the following optional dependencies:
2703 @item @code{python-passlib}
2704 @item @code{python-babel}
2705 @item @code{python-cryptography}
2706 @item @code{python-pytz}
2707 @item @code{python-psycopg2}
2708 @item @code{python-furl}
2709 @item @code{python-flask-babel}
2712 (license license:bsd-3)))
2714 (define-public python2-sqlalchemy-utils
2715 (package-with-python2 python-sqlalchemy-utils))
2717 (define-public python-alchemy-mock
2719 (name "python-alchemy-mock")
2721 (home-page "https://github.com/miki725/alchemy-mock")
2724 (uri (pypi-uri "alchemy-mock" version))
2727 "0ylxygl3bcdapzz529n8wgk7vx9gjwb3ism564ypkpd7dbsw653r"))))
2728 (build-system python-build-system)
2730 '(#:phases (modify-phases %standard-phases
2733 ;; Create pytest.ini that adds doctest options to
2734 ;; prevent test failure. Taken from tox.ini.
2735 (call-with-output-file "pytest.ini"
2737 (format port "[pytest]
2738 doctest_optionflags=IGNORE_EXCEPTION_DETAIL
2740 (invoke "pytest" "-vv" "--doctest-modules"
2741 "alchemy_mock/"))))))
2743 `(("python-mock" ,python-mock)
2744 ("python-pytest" ,python-pytest)))
2746 `(("python-six" ,python-six)
2747 ("python-sqlalchemy" ,python-sqlalchemy)))
2748 (synopsis "Mock helpers for SQLAlchemy")
2750 "This package provides mock helpers for SQLAlchemy that makes it easy
2751 to mock an SQLAlchemy session while preserving the ability to do asserts.
2753 Normally Normally SQLAlchemy's expressions cannot be easily compared as
2754 comparison on binary expression produces yet another binary expression, but
2755 this library provides functions to facilitate such comparisons.")
2756 (license license:expat)))
2758 (define-public python-alembic
2760 (name "python-alembic")
2765 (uri (pypi-uri "alembic" version))
2767 (base32 "0if2dgb088clk738p26bwk50735h6jpd2kacdgc5capv2hiz6d2k"))))
2768 (build-system python-build-system)
2770 '(#:phases (modify-phases %standard-phases
2773 (invoke "pytest" "-vv"))))))
2775 `(("python-mock" ,python-mock)
2776 ("python-pytest-cov" ,python-pytest-cov)))
2778 `(("python-dateutil" ,python-dateutil)
2779 ("python-sqlalchemy" ,python-sqlalchemy)
2780 ("python-mako" ,python-mako)
2781 ("python-editor" ,python-editor)))
2782 (home-page "https://bitbucket.org/zzzeek/alembic")
2783 (synopsis "Database migration tool for SQLAlchemy")
2785 "Alembic is a lightweight database migration tool for usage with the
2786 SQLAlchemy Database Toolkit for Python.")
2787 (license license:expat)))
2789 (define-public python2-alembic
2790 (package-with-python2 python-alembic))
2792 (define-public python-pickleshare
2794 (name "python-pickleshare")
2799 (uri (pypi-uri "pickleshare" version))
2801 (base32 "1jmghg3c53yp1i8cm6pcrm280ayi8621rwyav9fac7awjr3kss47"))))
2802 (build-system python-build-system)
2804 `(#:phases (modify-phases %standard-phases
2807 (invoke "pytest"))))))
2809 `(("python-pytest" ,python-pytest)))
2810 (home-page "https://github.com/vivainio/pickleshare")
2811 (synopsis "Tiny key value database with concurrency support")
2813 "PickleShare is a small ‘shelve’-like datastore with concurrency support.
2814 Like shelve, a PickleShareDB object acts like a normal dictionary. Unlike
2815 shelve, many processes can access the database simultaneously. Changing a
2816 value in database is immediately visible to other processes accessing the same
2817 database. Concurrency is possible because the values are stored in separate
2818 files. Hence the “database” is a directory where all files are governed by
2820 (properties `((python2-variant . ,(delay python2-pickleshare))))
2821 (license license:expat)))
2823 (define-public python2-pickleshare
2824 (let ((pickleshare (package-with-python2
2825 (strip-python2-variant python-pickleshare))))
2826 (package (inherit pickleshare)
2827 (propagated-inputs `(("python2-pathlib2" ,python2-pathlib2)
2828 ,@(package-propagated-inputs pickleshare))))))
2830 (define-public python-apsw
2832 (name "python-apsw")
2833 (version "3.31.1-r1")
2837 (uri (string-append "https://github.com/rogerbinns/apsw/releases"
2838 "/download/" version "/apsw-" version ".zip"))
2841 "1gap5lr6c7bp134nzvfwr693i6d0fqyaysg3ms2cayjldv616yfx"))))
2842 (build-system python-build-system)
2844 `(("unzip" ,unzip)))
2846 `(("sqlite" ,sqlite)))
2849 (modify-phases %standard-phases
2852 (invoke "python" "setup.py" "build" "--enable-all-extensions")
2854 (add-after 'build 'build-test-helper
2856 (invoke "gcc" "-fPIC" "-shared" "-o" "./testextension.sqlext"
2857 "-I." "-Isqlite3" "src/testextension.c")
2860 (lambda* (#:key inputs outputs #:allow-other-keys)
2861 (add-installed-pythonpath inputs outputs)
2862 (invoke "python" "setup.py" "test")
2864 (home-page "https://github.com/rogerbinns/apsw/")
2865 (synopsis "Another Python SQLite Wrapper")
2866 (description "APSW is a Python wrapper for the SQLite
2867 embedded relational database engine. In contrast to other wrappers such as
2868 pysqlite it focuses on being a minimal layer over SQLite attempting just to
2869 translate the complete SQLite API into Python.")
2870 (license license:zlib)))
2872 (define-public python2-apsw
2873 (package-with-python2 python-apsw))
2875 (define-public python-aiosqlite
2877 (name "python-aiosqlite")
2882 (uri (pypi-uri "aiosqlite" version))
2885 "1w8248yz85xyzvvh4jaxnc59fqil45aka6h82kn1rcih4rjxbnn1"))))
2886 (build-system python-build-system)
2888 `(("python-aiounittest" ,python-aiounittest)))
2889 (home-page "https://github.com/jreese/aiosqlite")
2891 "Asyncio bridge for sqlite3")
2893 "The package aiosqlite replicates the standard sqlite3 module, but with
2894 async versions of all the standard connection and cursor methods, and context
2895 managers for automatically closing connections.")
2896 (license license:expat)))
2898 (define-public python2-neo4j-driver
2900 (name "python2-neo4j-driver")
2901 ;; NOTE: When upgrading to 1.5.0, please add a python3 variant.
2905 (uri (pypi-uri "neo4j-driver" version))
2908 "011r1vh182p8mm83d8dz9rfnc3l7rf7fd00cyrbyfzi71jmc4g98"))))
2909 (build-system python-build-system)
2911 `(#:python ,python-2))
2912 (home-page "https://neo4j.com/developer/python/")
2913 (synopsis "Neo4j driver code written in Python")
2914 (description "This package provides the Neo4j Python driver that connects
2915 to the database using Neo4j's binary protocol. It aims to be minimal, while
2916 being idiomatic to Python.")
2917 (license license:asl2.0)))
2919 (define-public python2-py2neo
2921 (name "python2-py2neo")
2925 (uri (pypi-uri "py2neo" version))
2928 "1f1q95vqcvlc3nsc33p841swnjdcjazddlq2dzi3qfnjqjrajxw1"))))
2929 (build-system python-build-system)
2931 `(#:python ,python-2))
2932 (home-page "https://py2neo.org")
2933 (synopsis "Library and toolkit for working with Neo4j in Python")
2934 (description "This package provides a client library and toolkit for
2935 working with Neo4j from within Python applications and from the command
2936 line. The core library has no external dependencies and has been carefully
2937 designed to be easy and intuitive to use.")
2938 (license license:asl2.0)))
2940 (define-public python-psycopg2
2942 (name "python-psycopg2")
2947 (uri (pypi-uri "psycopg2" version))
2949 (base32 "0hzmk6b1hb5riqkljr5xics6p4zbvmis6knbczb7zhq7273zc8zv"))))
2950 (build-system python-build-system)
2952 ;; Tests would require a postgresql database "psycopg2_test"
2953 ;; and a running postgresql database management service.
2954 `(#:tests? #f)) ; TODO re-enable after providing a test-db.
2956 `(("postgresql" ,postgresql))) ; libpq
2957 (home-page "http://initd.org/psycopg/")
2958 (synopsis "Python PostgreSQL adapter")
2960 "psycopg2 is a thread-safe PostgreSQL adapter that implements DB-API
2962 (license license:lgpl3+)))
2964 (define-public python2-psycopg2
2965 (package-with-python2 python-psycopg2))
2967 (define-public python-sadisplay
2969 (name "python-sadisplay")
2974 (uri (pypi-uri "sadisplay" version))
2977 "01d9lxhmgpb68gy8rd6zj6fcwp84n2qq210n1qsk3qbsir79bzh4"))))
2978 (build-system python-build-system)
2980 `(("python-sqlalchemy" ,python-sqlalchemy)))
2983 `(("python-nose" ,python-nose)))
2984 (home-page "https://bitbucket.org/estin/sadisplay")
2985 (synopsis "SQLAlchemy schema displayer")
2986 (description "This package provides a program to build Entity
2987 Relationship diagrams from a SQLAlchemy model (or directly from the
2989 (license license:bsd-3)))
2991 (define-public python2-sadisplay
2992 (package-with-python2 python-sadisplay))
2994 (define-public python-mysqlclient
2996 (name "python-mysqlclient")
3001 (uri (pypi-uri "mysqlclient" version))
3004 "1rf5l8hazs3v18hmcrm90z3hi9wxv553ipwd5l6kj8j7l6p7abzv"))))
3005 (build-system python-build-system)
3006 (arguments '(#:tests? #f)) ;XXX: requires a live database
3008 `(("mysql" ,mariadb "lib")
3009 ("mysql-dev" ,mariadb "dev")))
3010 (home-page "https://github.com/PyMySQL/mysqlclient-python")
3011 (synopsis "MySQLdb is an interface to the popular MySQL database server for Python")
3012 (description "MySQLdb is an interface to the popular MySQL database server
3013 for Python. The design goals are:
3015 @item Compliance with Python database API version 2.0 [PEP-0249],
3016 @item Thread-safety,
3017 @item Thread-friendliness (threads will not block each other).
3019 (license license:gpl2)))
3021 (define-public python-hiredis
3023 (name "python-hiredis")
3028 (uri (pypi-uri "hiredis" version))
3031 "1dfm2k9l9zar9nw9fwmm74zrgraxdxs04vx9li56fjcf289qx5fa"))))
3032 (build-system python-build-system)
3036 (home-page "https://github.com/redis/hiredis-py")
3037 (synopsis "Python extension that wraps protocol parsing code in hiredis")
3038 (description "Python-hiredis is a python extension that wraps protocol
3039 parsing code in hiredis. It primarily speeds up parsing of multi bulk replies.")
3040 (license license:bsd-3)))
3042 (define-public python2-hiredis
3043 (package-with-python2 python-hiredis))
3045 (define-public python-fakeredis
3047 (name "python-fakeredis")
3052 (uri (pypi-uri "fakeredis" version))
3055 "1s12mn4q4hz7402139khn9fx56kibj7nn0d6w81hn0zs07b90wpc"))))
3056 (build-system python-build-system)
3061 `(("python-sortedcontainers" ,python-sortedcontainers)))
3062 (home-page "https://github.com/jamesls/fakeredis")
3063 (synopsis "Fake implementation of redis API for testing purposes")
3065 "Fakeredis is a pure-Python implementation of the redis-py Python client
3066 that simulates talking to a redis server. It was created for a single purpose:
3067 to write unit tests.
3069 Setting up redis is not hard, but one often wants to write unit tests that don't
3070 talk to an external server such as redis. This module can be used as a
3071 reasonable substitute.")
3072 (license license:bsd-3)))
3074 (define-public python2-fakeredis
3075 (package-with-python2 python-fakeredis))
3077 (define-public python-redis
3079 (name "python-redis")
3084 (uri (pypi-uri "redis" version))
3086 (base32 "18h5b87g15x3j6pb1h2q27ri37p2qpvc9n2wgn5yl3b6m3y0qzhf"))))
3087 (build-system python-build-system)
3088 ;; Tests require a running Redis server.
3089 (arguments '(#:tests? #f))
3090 ;; As long as we are not running test, we do not need this input :-)
3092 ;; `(("python-pytest" ,python-pytest)))
3093 (home-page "https://github.com/andymccurdy/redis-py")
3094 (synopsis "Redis Python client")
3096 "This package provides a Python interface to the Redis key-value store.")
3097 (license license:expat)))
3099 (define-public python2-redis
3100 (package-with-python2 python-redis))
3102 (define-public python-rq
3110 (url "https://github.com/rq/rq")
3111 (commit (string-append "v" version))))
3112 (file-name (git-file-name name version))
3114 (base32 "0i7yyw828wdvl7ap4gb7jhm4p94502is3xxrgrdgwwp0l1rac004"))))
3115 (build-system python-build-system)
3117 '(#:phases (modify-phases %standard-phases
3118 (add-before 'check 'start-redis
3120 (invoke "redis-server" "--daemonize" "yes")))
3122 (lambda* (#:key outputs #:allow-other-keys)
3123 (let ((out (assoc-ref outputs "out")))
3124 ;; Drop test that needs the SDK for Sentry.io.
3125 (delete-file "tests/test_sentry.py")
3126 ;; Ensure 'rq' and 'rqworker' ends up on PATH.
3127 (setenv "PATH" (string-append out "/bin:"
3129 (invoke "pytest" "-vv")))))))
3131 `(("python-mock" ,python-mock)
3132 ("python-pytest" ,python-pytest)
3135 `(("python-click" ,python-click)
3136 ("python-redis" ,python-redis)))
3137 (home-page "https://python-rq.org/")
3138 (synopsis "Simple job queues for Python")
3140 "RQ (Redis Queue) is a simple Python library for queueing jobs and
3141 processing them in the background with workers. It is backed by Redis and it
3142 is designed to have a low barrier to entry.")
3143 (license license:bsd-2)))
3145 (define-public python2-rq
3146 (package-with-python2 python-rq))
3148 (define-public python-rq-scheduler
3150 (name "python-rq-scheduler")
3152 (home-page "https://github.com/rq/rq-scheduler")
3157 (commit (string-append "v" version))))
3158 (file-name (git-file-name name version))
3161 "0xg6yazqs5kbr2ayvhvljs1h5vgx5k5dds613fmhswln7gglf9hk"))))
3162 (build-system python-build-system)
3164 '(#:phases (modify-phases %standard-phases
3165 (add-before 'check 'start-redis
3167 (invoke "redis-server" "--daemonize" "yes")))
3170 (substitute* "run_tests.py"
3173 (invoke "./run_tests.py"))))))
3178 `(("python-croniter" ,python-croniter)
3179 ("python-rq" ,python-rq)))
3180 (synopsis "Job scheduling capabilities for RQ (Redis Queue)")
3182 "This package provides job scheduling capabilities to @code{python-rq}
3184 (license license:expat)))
3186 (define-public python-trollius-redis
3188 (name "python-trollius-redis")
3193 (uri (pypi-uri "trollius_redis" version))
3196 "0k3vypszmgmaipgw9xscvgm79h2zd6p6ci8gdp5sxl6g5kbqr9fy"))))
3197 (build-system python-build-system)
3198 ;; TODO: Tests require packaging 'hiredis'.
3199 (arguments '(#:tests? #f))
3200 (home-page "https://github.com/benjolitz/trollius-redis")
3201 (synopsis "Port of asyncio-redis to trollius")
3202 (description "@code{trollius-redis} is a Redis client for Python
3203 trollius. It is an asynchronous IO (PEP 3156) implementation of the
3205 (license license:bsd-2)))
3207 (define-public python2-trollius-redis
3208 (package-with-python2 python-trollius-redis))
3210 (define-public python-sqlparse
3212 (name "python-sqlparse")
3216 (uri (pypi-uri "sqlparse" version))
3219 "0j652a6z7bdf6c77aczfn8m8b2nsr1bcqq48wzghf8vi6wvj0qp1"))))
3220 (build-system python-build-system)
3223 (modify-phases %standard-phases
3225 (lambda _ (invoke "py.test"))))))
3227 `(("python-pytest" ,python-pytest)))
3228 (home-page "https://github.com/andialbrecht/sqlparse")
3229 (synopsis "Non-validating SQL parser")
3230 (description "Sqlparse is a non-validating SQL parser for Python. It
3231 provides support for parsing, splitting and formatting SQL statements.")
3232 (license license:bsd-3)))
3234 (define-public python2-sqlparse
3235 (package-with-python2 python-sqlparse))
3237 (define-public python-sql
3244 (uri (pypi-uri "python-sql" version))
3246 (base32 "05ni936y0ia9xmryl7mlhbj9i80nnvq1bi4zxhb96rv7yvpb3fqb"))))
3247 (build-system python-build-system)
3248 (home-page "https://python-sql.tryton.org/")
3249 (synopsis "Library to write SQL queries in a pythonic way")
3250 (description "@code{python-sql} is a library to write SQL queries, that
3251 transforms idiomatic python function calls to well-formed SQL queries.")
3252 (license license:bsd-3)))
3254 (define-public python2-sql
3255 (package-with-python2 python-sql))
3257 (define-public python-pypika
3259 (name "python-pypika")
3262 (origin (method git-fetch)
3264 (url "https://github.com/kayak/pypika")
3265 (commit (string-append "v" version))))
3266 (file-name (git-file-name name version))
3269 "089z1c778q1fwhzsc88ws8j5gm2hgxknibabn4wpax8rz2bfs3ck"))))
3270 (build-system python-build-system)
3272 `(("python-parameterized" ,python-parameterized)))
3273 (home-page "https://github.com/kayak/pypika")
3274 (synopsis "SQL query builder API for Python")
3276 "PyPika is a python SQL query builder that exposes the full richness of
3277 the SQL language using a syntax that reflects the resulting query.")
3278 (license license:asl2.0)))
3280 (define-public mongo-tools
3282 (name "mongo-tools")
3285 (origin (method git-fetch)
3287 (url "https://github.com/mongodb/mongo-tools")
3288 (commit (string-append "r" version))))
3289 (file-name (git-file-name name version))
3292 "1bcsz5cvj39a7nsxsfqmz9igrw33j6yli9kffigqyscs52amw7x1"))))
3293 (build-system go-build-system)
3295 `(#:import-path "github.com/mongodb/mongo-tools"
3296 #:modules ((srfi srfi-1)
3297 (guix build go-build-system)
3299 #:install-source? #f
3302 '("bsondump" "mongodump" "mongoexport" "mongofiles"
3303 "mongoimport" "mongooplog" "mongorestore"
3304 "mongostat" "mongotop")))
3305 (modify-phases %standard-phases
3306 (add-after 'unpack 'delete-bundled-source-code
3308 (delete-file-recursively
3309 "src/github.com/mongodb/mongo-tools/vendor")
3311 (add-after 'delete-bundled-source-code 'patch-source
3313 ;; Remove a redundant argument that causes compilation to fail.
3315 "src/github.com/mongodb/mongo-tools/mongorestore/filepath.go"
3316 (("skipping restore of system.profile collection\", db)")
3317 "skipping restore of system.profile collection\")"))
3321 (for-each (lambda (tool)
3324 ;; This is where the tests expect to find the
3326 "-o" ,(string-append
3327 "src/github.com/mongodb/mongo-tools/bin/"
3330 "-tags=\"ssl sasl\""
3332 "-extldflags=-Wl,-z,now,-z,relro"
3334 "src/github.com/mongodb/mongo-tools/"
3335 tool "/main/" tool ".go"))))
3336 (simple-format #t "build: running ~A\n"
3337 (string-join command))
3338 (apply invoke command)))
3343 (with-directory-excursion "src"
3344 (for-each (lambda (tool)
3347 (string-append "github.com/mongodb/mongo-tools/"
3352 (lambda* (#:key outputs #:allow-other-keys)
3353 (for-each (lambda (tool)
3355 (string-append "src/github.com/mongodb/mongo-tools/bin/"
3357 (string-append (assoc-ref outputs "out")
3362 `(("go-github.com-howeyc-gopass" ,go-github.com-howeyc-gopass)
3363 ("go-github.com-jessevdk-go-flags" ,go-github.com-jessevdk-go-flags)
3364 ("go-golang-org-x-crypto" ,go-golang-org-x-crypto)
3365 ("go-gopkg.in-mgo.v2" ,go-gopkg.in-mgo.v2)
3366 ("go-gopkg.in-tomb.v2" ,go-gopkg.in-tomb.v2)
3367 ("go-github.com-nsf-termbox-go" ,go-github.com-nsf-termbox-go)
3368 ("go-github.com-smartystreets-goconvey" ,go-github.com-smartystreets-goconvey)))
3369 (home-page "https://github.com/mongodb/mongo-tools")
3370 (synopsis "Various tools for interacting with MongoDB and BSON")
3372 "This package includes a collection of tools related to MongoDB.
3375 Display BSON files in a human-readable format
3377 Convert data from JSON, TSV or CSV and insert them into a collection
3379 Write an existing collection to CSV or JSON format
3380 @item mongodump/mongorestore
3381 Dump MongoDB backups to disk in the BSON format
3383 Read MongoDB backups in the BSON format, and restore them to a live database
3385 Monitor live MongoDB servers, replica sets, or sharded clusters
3387 Read, write, delete, or update files in GridFS
3389 Replay oplog entries between MongoDB servers
3391 Monitor read/write activity on a mongo server
3393 (license license:asl2.0)))
3395 ;; There are many wrappers for this in other languages. When touching, please
3396 ;; be sure to ensure all dependencies continue to build.
3397 (define-public apache-arrow
3399 (name "apache-arrow")
3405 (url "https://github.com/apache/arrow")
3406 (commit (string-append "apache-arrow-" version))))
3407 (file-name (git-file-name name version))
3410 "02r6yx3yhywzikd3b0vfkjgddhfiriyx2vpm3jf5880wq59x798a"))))
3411 (build-system cmake-build-system)
3415 (modify-phases %standard-phases
3416 (add-before 'configure 'enter-source-directory
3417 (lambda _ (chdir "cpp") #t))
3418 (add-after 'unpack 'set-env
3420 (setenv "BOOST_ROOT" (assoc-ref %build-inputs "boost"))
3421 (setenv "BROTLI_HOME" (assoc-ref %build-inputs "brotli"))
3422 (setenv "FLATBUFFERS_HOME" (assoc-ref %build-inputs "flatbuffers"))
3423 (setenv "RAPIDJSON_HOME" (assoc-ref %build-inputs "rapidjson"))
3425 #:build-type "Release"
3427 (list "-DARROW_PYTHON=ON"
3430 "-DARROW_PARQUET=ON"
3431 "-DPARQUET_BUILD_EXECUTABLES=ON"
3432 ;; The maintainers disallow using system versions of
3434 ;; https://issues.apache.org/jira/browse/ARROW-3507. This
3435 ;; is unfortunate because jemalloc increases performance:
3436 ;; https://arrow.apache.org/blog/2018/07/20/jemalloc/.
3437 "-DARROW_JEMALLOC=OFF"
3439 ;; The CMake option ARROW_DEPENDENCY_SOURCE is a global
3440 ;; option that instructs the build system how to resolve
3441 ;; each dependency. SYSTEM = Finding the dependency in
3442 ;; system paths using CMake's built-in find_package
3443 ;; function, or using pkg-config for packages that do not
3444 ;; have this feature
3445 "-DARROW_DEPENDENCY_SOURCE=SYSTEM"
3447 ;; Split output into its component packages.
3448 (string-append "-DCMAKE_INSTALL_PREFIX="
3449 (assoc-ref %outputs "lib"))
3450 (string-append "-DCMAKE_INSTALL_RPATH="
3451 (assoc-ref %outputs "lib")
3453 (string-append "-DCMAKE_INSTALL_BINDIR="
3454 (assoc-ref %outputs "out")
3456 (string-append "-DCMAKE_INSTALL_INCLUDEDIR="
3457 (assoc-ref %outputs "include")
3461 "-DARROW_WITH_SNAPPY=ON"
3462 "-DARROW_WITH_ZLIB=ON"
3463 "-DARROW_WITH_ZSTD=ON"
3464 "-DARROW_WITH_LZ4=ON"
3465 "-DARROW_COMPUTE=ON"
3467 "-DARROW_DATASET=ON"
3468 "-DARROW_FILESYSTEM=ON"
3471 ;; Arrow Python C++ integration library (required for
3472 ;; building pyarrow). This library must be built against
3473 ;; the same Python version for which you are building
3474 ;; pyarrow. NumPy must also be installed. Enabling this
3475 ;; option also enables ARROW_COMPUTE, ARROW_CSV,
3476 ;; ARROW_DATASET, ARROW_FILESYSTEM, ARROW_HDFS, and
3480 ;; Building the tests forces on all the
3481 ;; optional features and the use of static
3483 "-DARROW_BUILD_TESTS=OFF"
3484 "-DBENCHMARK_ENABLE_GTEST_TESTS=OFF"
3485 ;;"-DBENCHMARK_ENABLE_TESTING=OFF"
3486 "-DARROW_BUILD_STATIC=OFF")))
3489 ("brotli" ,google-brotli)
3490 ("double-conversion" ,double-conversion)
3494 ("apache-thrift" ,apache-thrift "lib")
3495 ("protobuf" ,protobuf)
3496 ("rapidjson" ,rapidjson)
3500 ("zstd" ,zstd "lib")
3503 ("python-3" ,python)
3504 ("python-numpy" ,python-numpy)))
3506 `(("pkg-config" ,pkg-config)))
3507 (outputs '("out" "lib" "include"))
3508 (home-page "https://arrow.apache.org/")
3509 (synopsis "Columnar in-memory analytics")
3510 (description "Apache Arrow is a columnar in-memory analytics layer
3511 designed to accelerate big data. It houses a set of canonical in-memory
3512 representations of flat and hierarchical data along with multiple
3513 language-bindings for structure manipulation. It also provides IPC and common
3514 algorithm implementations.")
3515 (license license:asl2.0)))
3517 (define-public python-pyarrow
3519 (inherit apache-arrow)
3520 (name "python-pyarrow")
3521 (build-system python-build-system)
3523 '(#:tests? #f ; XXX There are no tests in the "python" directory
3525 (modify-phases %standard-phases
3526 (delete 'build) ; XXX the build is performed again during the install phase
3527 (add-after 'unpack 'enter-source-directory
3528 (lambda _ (chdir "python") #t))
3529 (add-after 'unpack 'make-git-checkout-writable
3531 (for-each make-file-writable (find-files "."))
3534 `(("apache-arrow" ,apache-arrow "lib")
3535 ("python-numpy" ,python-numpy)
3536 ("python-pandas" ,python-pandas)
3537 ("python-six" ,python-six)))
3539 `(("cmake" ,cmake-minimal)
3540 ("pkg-config" ,pkg-config)
3541 ("python-cython" ,python-cython)
3542 ("python-pytest" ,python-pytest)
3543 ("python-pytest-runner" ,python-pytest-runner)
3544 ("python-setuptools-scm" ,python-setuptools-scm)))
3546 (home-page "https://arrow.apache.org/docs/python/")
3547 (synopsis "Python bindings for Apache Arrow")
3549 "This library provides a Pythonic API wrapper for the reference Arrow C++
3550 implementation, along with tools for interoperability with pandas, NumPy, and
3551 other traditional Python scientific computing packages.")
3552 (license license:asl2.0)))
3554 (define-public python2-pyarrow
3555 (package-with-python2 python-pyarrow))
3557 (define-public python-crate
3559 (name "python-crate")
3563 (uri (pypi-uri "crate" version))
3566 "0ngmlvi320c5gsxab0s7qgq0ck4jdlcwvb6lbjhnfprafdp56vvx"))))
3567 (build-system python-build-system)
3569 `(("python-urllib3" ,python-urllib3)))
3570 (home-page "https://github.com/crate/crate-python")
3571 (synopsis "CrateDB Python client")
3573 "This package provides a Python client library for CrateDB.
3574 It implements the Python DB API 2.0 specification and includes support for
3576 (license license:asl2.0)))
3578 (define-public libdbi
3584 (uri (string-append "mirror://sourceforge/libdbi/libdbi/libdbi-"
3585 version "/libdbi-" version ".tar.gz"))
3588 "00s5ra7hdlq25iv23nwf4h1v3kmbiyzx0v9bhggjiii4lpf6ryys"))))
3589 (build-system gnu-build-system)
3590 (synopsis "Database independent abstraction layer in C")
3592 "This library implements a database independent abstraction layer in C,
3593 similar to the DBI/DBD layer in Perl. Writing one generic set of code,
3594 programmers can leverage the power of multiple databases and multiple
3595 simultaneous database connections by using this framework.")
3596 (home-page "http://libdbi.sourceforge.net/")
3597 (license license:lgpl2.1+)))
3599 (define-public libdbi-drivers
3601 (name "libdbi-drivers")
3605 (uri (string-append "mirror://sourceforge/libdbi-drivers/"
3606 "libdbi-drivers/libdbi-drivers-" version
3607 "/libdbi-drivers-" version ".tar.gz"))
3610 "0m680h8cc4428xin4p733azysamzgzcmv4psjvraykrsaz6ymlj3"))))
3611 (build-system gnu-build-system)
3614 ("inetutils" ,inetutils)
3615 ("glibc-locales" ,glibc-locales)
3616 ("mariadb" ,mariadb)))
3618 `(("libdbi" ,libdbi)
3619 ("mariadb:dev" ,mariadb "dev")
3620 ("mariadb:lib" ,mariadb "lib")
3621 ("postgresql" ,postgresql)
3622 ("sqlite" ,sqlite)))
3625 (let ((libdbi (assoc-ref %build-inputs "libdbi"))
3626 (mysql:inc (assoc-ref %build-inputs "mariadb:dev"))
3627 (mysql:lib (assoc-ref %build-inputs "mariadb:lib"))
3628 (postgresql (assoc-ref %build-inputs "postgresql"))
3629 (sqlite (assoc-ref %build-inputs "sqlite")))
3630 (list "--disable-docs"
3631 (string-append "--with-dbi-incdir=" libdbi "/include")
3632 (string-append "--with-dbi-libdir=" libdbi "/lib")
3634 (string-append "--with-mysql-incdir=" mysql:inc "/include/mysql")
3635 (string-append "--with-mysql-libdir=" mysql:lib "/lib")
3637 (string-append "--with-pgsql-incdir=" postgresql "/include")
3638 (string-append "--with-pgsql-libdir=" postgresql "/lib")
3640 (string-append "--with-sqlite-incdir=" sqlite "/include")
3641 (string-append "--with-sqlite-libdir=" sqlite "/lib")))
3643 (modify-phases %standard-phases
3644 (add-after 'unpack 'fix-tests
3645 (lambda* (#:key inputs #:allow-other-keys)
3646 (substitute* "tests/test_mysql.sh"
3648 (string-append "MYMYSQLD="
3649 (assoc-ref inputs "mariadb")
3652 (add-after 'install 'remove-empty-directories
3653 (lambda* (#:key outputs #:allow-other-keys)
3654 (let ((var (string-append (assoc-ref outputs "out") "/var")))
3655 (delete-file-recursively var))
3657 (synopsis "Database drivers for the libdbi framework")
3659 "The @code{libdbi-drivers} library provides the database specific drivers
3660 for the @code{libdbi} framework.
3662 The drivers officially supported by @code{libdbi} are:
3668 (home-page "http://libdbi-drivers.sourceforge.net/")
3669 (license license:lgpl2.1+)))
3678 (url "https://github.com/SOCI/soci/")
3680 (file-name (git-file-name name version))
3683 "06faswdxd2frqr9xnx6bxc7zwarlzsbdi3bqpz7kwdxsjvq41rnb"))))
3684 (build-system cmake-build-system)
3686 `(("postgresql" ,postgresql)
3690 ("mariadb:dev" ,mariadb "dev")
3691 ("mariadb:lib" ,mariadb "lib")))
3693 `(#:tests? #f ; Tests may require running database management systems.
3695 (modify-phases %standard-phases
3696 (add-after 'unpack 'fix-lib-path
3698 (substitute* "CMakeLists.txt"
3699 (("set\\(SOCI_LIBDIR \"lib64\"\\)") ""))
3701 (synopsis "C++ Database Access Library")
3703 "SOCI is an abstraction layer for several database backends, including
3704 PostreSQL, SQLite, ODBC and MySQL.")
3705 (home-page "http://soci.sourceforge.net/")
3706 (license license:boost1.0)))