Merge branch 'master' into staging
[jackhill/guix/guix.git] / gnu / packages / databases.scm
1 ;;; GNU Guix --- Functional package management for GNU
2 ;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2018 Ludovic Courtès <ludo@gnu.org>
3 ;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr>
4 ;;; Copyright © 2013, 2017 Cyril Roelandt <tipecaml@gmail.com>
5 ;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org>
6 ;;; Copyright © 2014, 2015, 2016, 2018 Mark H Weaver <mhw@netris.org>
7 ;;; Copyright © 2014, 2015 Eric Bavier <bavier@member.fsf.org>
8 ;;; Copyright © 2015, 2016 Sou Bunnbu <iyzsong@gmail.com>
9 ;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
10 ;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
11 ;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
12 ;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org>
13 ;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
14 ;;; Copyright © 2016, 2017 Nikita <nikita@n0.is>
15 ;;; Copyright © 2016, 2017, 2018 Roel Janssen <roel@gnu.org>
16 ;;; Copyright © 2016 David Craven <david@craven.ch>
17 ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
18 ;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca>
19 ;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org>
20 ;;; Copyright © 2016, 2017, 2018, 2019, 2020 Marius Bakke <mbakke@fastmail.com>
21 ;;; Copyright © 2017, 2018 Julien Lepiller <julien@lepiller.eu>
22 ;;; Copyright © 2017, 2020 Thomas Danckaert <post@thomasdanckaert.be>
23 ;;; Copyright © 2017 Jelle Licht <jlicht@fsfe.org>
24 ;;; Copyright © 2017 Adriano Peluso <catonano@gmail.com>
25 ;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
26 ;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
27 ;;; Copyright © 2017, 2018 Alex Vong <alexvong1995@gmail.com>
28 ;;; Copyright © 2017, 2018 Ben Woodcroft <donttrustben@gmail.com>
29 ;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
30 ;;; Copyright © 2017, 2018 Pierre Langlois <pierre.langlois@gmx.com>
31 ;;; Copyright © 2015, 2017, 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
32 ;;; Copyright © 2017 Kristofer Buffington <kristoferbuffington@gmail.com>
33 ;;; Copyright © 2018 Amirouche Boubekki <amirouche@hypermove.net>
34 ;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
35 ;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com>
36 ;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us>
37 ;;; Copyright © 2019 Alex Griffin <a@ajgrf.com>
38 ;;; Copyright © 2019 Gábor Boskovits <boskovits@gmail.com>
39 ;;; Copyright © 2019 Pierre Langlois <pierre.langlois@gmx.com>
40 ;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
41 ;;; Copyright © 2020 Pierre Neidhardt <mail@ambrevar.xyz>
42 ;;; Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
43 ;;; Copyright © 2020 Tanguy Le Carrour <tanguy@bioneland.org>
44 ;;; Copyright © 2020 Lars-Dominik Braun <ldb@leibniz-psychology.org>
45 ;;; Copyright © 2020 Guy Fleury Iteriteka <gfleury@disroot.org>
46 ;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
47 ;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
48 ;;;
49 ;;; This file is part of GNU Guix.
50 ;;;
51 ;;; GNU Guix is free software; you can redistribute it and/or modify it
52 ;;; under the terms of the GNU General Public License as published by
53 ;;; the Free Software Foundation; either version 3 of the License, or (at
54 ;;; your option) any later version.
55 ;;;
56 ;;; GNU Guix is distributed in the hope that it will be useful, but
57 ;;; WITHOUT ANY WARRANTY; without even the implied warranty of
58 ;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
59 ;;; GNU General Public License for more details.
60 ;;;
61 ;;; You should have received a copy of the GNU General Public License
62 ;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
63
64 (define-module (gnu packages databases)
65 #:use-module (gnu packages)
66 #:use-module (gnu packages admin)
67 #:use-module (gnu packages algebra)
68 #:use-module (gnu packages autotools)
69 #:use-module (gnu packages avahi)
70 #:use-module (gnu packages base)
71 #:use-module (gnu packages bash)
72 #:use-module (gnu packages bison)
73 #:use-module (gnu packages boost)
74 #:use-module (gnu packages check)
75 #:use-module (gnu packages cmake)
76 #:use-module (gnu packages compression)
77 #:use-module (gnu packages crypto)
78 #:use-module (gnu packages curl)
79 #:use-module (gnu packages cyrus-sasl)
80 #:use-module (gnu packages dbm)
81 #:use-module (gnu packages emacs)
82 #:use-module (gnu packages flex)
83 #:use-module (gnu packages gcc)
84 #:use-module (gnu packages gettext)
85 #:use-module (gnu packages glib)
86 #:use-module (gnu packages gnupg)
87 #:use-module (gnu packages guile)
88 #:use-module (gnu packages time)
89 #:use-module (gnu packages golang)
90 #:use-module (gnu packages icu4c)
91 #:use-module (gnu packages jemalloc)
92 #:use-module (gnu packages language)
93 #:use-module (gnu packages libedit)
94 #:use-module (gnu packages libevent)
95 #:use-module (gnu packages linux)
96 #:use-module (gnu packages logging)
97 #:use-module (gnu packages man)
98 #:use-module (gnu packages maths)
99 #:use-module (gnu packages multiprecision)
100 #:use-module (gnu packages ncurses)
101 #:use-module (gnu packages onc-rpc)
102 #:use-module (gnu packages parallel)
103 #:use-module (gnu packages pcre)
104 #:use-module (gnu packages perl)
105 #:use-module (gnu packages perl-check)
106 #:use-module (gnu packages perl-web)
107 #:use-module (gnu packages pkg-config)
108 #:use-module (gnu packages popt)
109 #:use-module (gnu packages protobuf)
110 #:use-module (gnu packages python)
111 #:use-module (gnu packages python-crypto)
112 #:use-module (gnu packages python-web)
113 #:use-module (gnu packages python-science)
114 #:use-module (gnu packages python-xyz)
115 #:use-module (gnu packages rdf)
116 #:use-module (gnu packages readline)
117 #:use-module (gnu packages regex)
118 #:use-module (gnu packages rpc)
119 #:use-module (gnu packages ruby)
120 #:use-module (gnu packages serialization)
121 #:use-module (gnu packages sphinx)
122 #:use-module (gnu packages sqlite)
123 #:use-module (gnu packages tcl)
124 #:use-module (gnu packages terminals)
125 #:use-module (gnu packages textutils)
126 #:use-module (gnu packages tls)
127 #:use-module (gnu packages valgrind)
128 #:use-module (gnu packages web)
129 #:use-module (gnu packages xml)
130 #:use-module ((guix licenses) #:prefix license:)
131 #:use-module (guix packages)
132 #:use-module (guix download)
133 #:use-module (guix bzr-download)
134 #:use-module (guix git-download)
135 #:use-module (guix hg-download)
136 #:use-module (guix build-system emacs)
137 #:use-module (guix build-system gnu)
138 #:use-module (guix build-system go)
139 #:use-module (guix build-system perl)
140 #:use-module (guix build-system python)
141 #:use-module (guix build-system ruby)
142 #:use-module (guix build-system cmake)
143 #:use-module (guix build-system scons)
144 #:use-module (guix build-system trivial)
145 #:use-module (guix utils)
146 #:use-module (srfi srfi-1)
147 #:use-module (srfi srfi-26)
148 #:use-module (ice-9 match))
149
150 (define-public 4store
151 (package
152 (name "4store")
153 (version "1.1.6")
154 (source (origin
155 (method git-fetch)
156 (uri (git-reference
157 (url "https://github.com/4store/4store")
158 (commit (string-append "v" version))))
159 (file-name (git-file-name name version))
160 (sha256
161 (base32 "1kzdfmwpzy64cgqlkcz5v4klwx99w0jk7afckyf7yqbqb4rydmpk"))
162 (patches (search-patches "4store-unset-preprocessor-directive.patch"
163 "4store-fix-buildsystem.patch"))))
164 (build-system gnu-build-system)
165 (native-inputs
166 `(("perl" ,perl)
167 ("python" ,python-2)
168 ("autoconf" ,autoconf)
169 ("automake" ,automake)
170 ("gettext" ,gettext-minimal)
171 ("libtool" ,libtool)
172 ("pcre" ,pcre "bin") ;for 'pcre-config'
173 ("pkg-config" ,pkg-config)))
174 (inputs
175 `(("glib" ,glib)
176 ("rasqal" ,rasqal)
177 ("libxml2" ,libxml2)
178 ("raptor2" ,raptor2)
179 ("readline" ,readline)
180 ("avahi" ,avahi)
181 ("cyrus-sasl" ,cyrus-sasl)
182 ("openssl" ,openssl)
183 ("util-linux" ,util-linux "lib")))
184 ;; http://www.4store.org has been down for a while now.
185 (home-page "https://github.com/4store/4store")
186 (synopsis "Clustered RDF storage and query engine")
187 (description "4store is a RDF/SPARQL store written in C, supporting
188 either single machines or networked clusters.")
189 (license license:gpl3+)))
190
191 (define-public go-gopkg.in-mgo.v2
192 (package
193 (name "go-gopkg.in-mgo.v2")
194 (version "2016.08.01")
195 (source (origin
196 (method git-fetch)
197 (uri (git-reference
198 (url "https://github.com/go-mgo/mgo")
199 (commit (string-append "r" version))))
200 (file-name (git-file-name name version))
201 (sha256
202 (base32
203 "0rwbi1z63w43b0z9srm8m7iz1fdwx7bq7n2mz862d6liiaqa59jd"))))
204 (build-system go-build-system)
205 (arguments
206 `(#:import-path "gopkg.in/mgo.v2"
207 ;; TODO: The tests fail as MongoDB fails to start
208 ;; Error parsing command line: unrecognised option '--chunkSize'
209 #:tests? #f
210 #:phases
211 (modify-phases %standard-phases
212 (delete 'reset-gzip-timestamps)
213 (add-before 'check 'start-mongodb
214 (lambda* (#:key tests? #:allow-other-keys)
215 (when tests?
216 (with-directory-excursion "src/gopkg.in/mgo.v2"
217 (invoke "make" "startdb")))
218 #t))
219 (add-after 'check 'stop'mongodb
220 (lambda* (#:key tests? #:allow-other-keys)
221 (when tests?
222 (with-directory-excursion "src/gopkg.in/mgo.v2"
223 (invoke "make" "stopdb")))
224 #t)))))
225 (native-inputs
226 `(("go-gopkg.in-check.v1" ,go-gopkg.in-check.v1)
227 ("mongodb" ,mongodb)
228 ("daemontools" ,daemontools)))
229 (synopsis "@code{mgo} offers a rich MongoDB driver for Go.")
230 (description
231 "@code{mgo} (pronounced as mango) is a MongoDB driver for the Go language.
232 It implements a rich selection of features under a simple API following
233 standard Go idioms.")
234 (home-page "https://labix.org/mgo")
235 (license license:bsd-2)))
236
237 (define-public ephemeralpg
238 (package
239 (name "ephemeralpg")
240 (version "3.1")
241 (source
242 (origin
243 (method url-fetch)
244 (uri (string-append
245 "https://eradman.com/ephemeralpg/code/ephemeralpg-"
246 version ".tar.gz"))
247 (sha256
248 (base32 "1ap22ki8yz6agd0qybcjgs4b9izw1rwwcgpxn3jah2ccfyax34s6"))))
249 (build-system gnu-build-system)
250 (arguments
251 `(#:make-flags (list (string-append "CC=" ,(cc-for-target))
252 (string-append "PREFIX=" %output))
253 #:phases
254 (modify-phases %standard-phases
255 (delete 'configure) ; no configure script
256 (add-after 'install 'wrap
257 (lambda* (#:key inputs outputs #:allow-other-keys)
258 (let ((out (assoc-ref outputs "out")))
259 (wrap-program (string-append out "/bin/pg_tmp")
260 `("PATH" ":" prefix
261 (,(string-append (assoc-ref inputs "util-linux")
262 "/bin")
263 ,(string-append (assoc-ref inputs "postgresql")
264 "/bin")
265 ;; For getsocket.
266 ,(string-append out "/bin")))))
267 #t)))
268 #:test-target "test"))
269 (inputs
270 `(("postgresql" ,postgresql)
271 ("util-linux" ,util-linux)))
272 (native-inputs
273 ;; For tests.
274 `(("ruby" ,ruby)
275 ("which" ,which)))
276 (home-page "https://eradman.com/ephemeralpg/")
277 (synopsis "Run temporary PostgreSQL databases")
278 (description
279 "@code{pg_tmp} creates temporary PostgreSQL databases, suitable for tasks
280 like running software test suites. Temporary databases created with
281 @code{pg_tmp} have a limited shared memory footprint and are automatically
282 garbage-collected after a configurable number of seconds (the default is
283 60).")
284 (license license:isc)))
285
286 (define-public es-dump-restore
287 (package
288 (name "es-dump-restore")
289 (version "2.1.0")
290 (source
291 (origin
292 (method url-fetch)
293 (uri (rubygems-uri "es_dump_restore" version))
294 (sha256
295 (base32
296 "020yk7f1hw48clmf5501z3xv9shsdchyymcv0y2cci2c1xvr1mim"))))
297 (build-system ruby-build-system)
298 (arguments
299 '(#:tests? #f)) ;; No testsuite.
300 (propagated-inputs
301 `(("ruby-httpclient" ,ruby-httpclient)
302 ("ruby-multi-json" ,ruby-multi-json)
303 ("ruby-progress_bar" ,ruby-progress_bar)
304 ("ruby-rubyzip" ,ruby-rubyzip)
305 ("ruby-thor" ,ruby-thor)))
306 (synopsis "Utility for dumping and restoring ElasticSearch indexes")
307 (description
308 "This package provides a utility for dumping the contents of an
309 ElasticSearch index to a compressed file and restoring the dumpfile back to an
310 ElasticSearch server")
311 (home-page "https://github.com/patientslikeme/es_dump_restore")
312 (license license:expat)))
313
314 (define-public firebird
315 (package
316 (name "firebird")
317 (version "3.0.7")
318 (source
319 (let ((revision "33374-0"))
320 (origin
321 (method url-fetch)
322 (uri (string-append "https://github.com/FirebirdSQL/"
323 "firebird/releases/download/R"
324 (string-replace-substring version "." "_") "/"
325 "Firebird-" version "." revision ".tar.bz2"))
326 (sha256
327 (base32 "0xpy1bncz36c6n28y7kllm1dkrdkn4vb4gw2n43f2351mznmrf5c"))
328 (modules '((guix build utils)))
329 (snippet
330 `(begin
331 (for-each
332 delete-file-recursively
333 (list "extern/btyacc/test" ; TODO: package and remove entirely
334 "extern/editline"
335 "extern/icu"
336 "extern/libtommath"
337 "extern/zlib"
338 "src/include/firebird/impl/boost"
339
340 ;; Missing licence.
341 "builds/install/arch-specific/solaris"
342 "extern/SfIO"
343 "src/msgs/templates.sql"
344
345 ;; Generated files missing sources.
346 "doc/Firebird-3-QuickStart.pdf"
347 (string-append "doc/Firebird-" ,version
348 "-ReleaseNotes.pdf")
349 "doc/README.SecureRemotePassword.html"))
350 #t)))))
351 (build-system gnu-build-system)
352 (outputs (list "debug" "out"))
353 (arguments
354 `(#:configure-flags
355 (let ((out (assoc-ref %outputs "out")))
356 (list (string-append "--with-fbsbin=" out "/sbin")
357 (string-append "--with-fbdoc=" out "/share/doc/"
358 ,name "-" ,version)
359 (string-append "--with-fbconf=" out "/lib/firebird")
360 (string-append "--with-fbintl=" out "/lib/firebird/intl")
361 (string-append "--with-fbmisc=" out "/lib/firebird/misc")
362 (string-append "--with-fbmsg=" out "/lib/firebird")
363 (string-append "--with-fbplugins=" out "/lib/firebird/plugins")
364 (string-append "--with-fbudf=" out "/lib/firebird/UDF")
365 "--with-fbglock=/run/firebird"
366 "--with-fblog=/var/log/firebird"
367 "--with-fbhelp=/var/lib/firebird/system"
368 "--with-fbsecure-db=/var/lib/firebird/secure"
369 "--without-fbsample"
370 "--without-fbsample-db"
371 "--with-system-editline"))
372 #:make-flags
373 (list (string-append "CC=" ,(cc-for-target))
374 ;; The plugins/ can't find libfbclient otherwise.
375 (string-append "LDFLAGS=-Wl,-rpath="
376 (assoc-ref %outputs "out") "/lib"))
377 #:tests? #f ; no test suite
378 #:modules ((guix build gnu-build-system)
379 (guix build utils)
380 (srfi srfi-26))
381 #:phases
382 (modify-phases %standard-phases
383 (add-after 'unpack 'use-system-boost
384 (lambda _
385 (substitute* "src/include/firebird/Message.h"
386 (("\"\\./impl/boost/preprocessor/seq/for_each_i\\.hpp\"")
387 "<boost/preprocessor/seq/for_each_i.hpp>")
388 (("FB_BOOST_") "BOOST_"))
389 #t))
390 (add-after 'unpack 'patch-installation
391 (lambda _
392 (substitute*
393 "builds/install/arch-specific/linux/makeInstallImage.sh.in"
394 (("/bin/sh") (which "bash"))
395 ;; Remove shell script helpers from $PATH.
396 (("(addLibs|cp) .*\\.sh .*@FB_SBINDIR@") ":")
397 ;; Put files where Guix users expect them.
398 (("(License\\.txt.*)@FB_CONFDIR" match)
399 (string-append match "@FB_DOCDIR@"))
400 (("@FB_CONFDIR@(.*License\\.txt.*)" match)
401 (string-append "@FB_DOCDIR@" match))
402 (("(cp .*/doc/.*)@FB_CONFDIR@(.*)" _ head tail)
403 (string-append head "@FB_DOCDIR@" tail "\n")))
404 (substitute*
405 (list "builds/install/posix-common/changeServerMode.sh.in"
406 "builds/install/posix-common/install.sh.in")
407 ;; Skip phases that (could) cause problems in Guix.
408 (("check(InstallUser|IfServerRunning|Libraries)|addFirebirdUser")
409 ":")
410 ;; Skip phases that are merely pointless on Guix.
411 (("buildUninstallFile|installInitdScript|startFirebird") ":")
412 ;; Omit randomly generated password with bonus timestamp.
413 (("setDBAPassword") ":"))
414
415 ;; These promote proprietary workflows not relevant on Guix.
416 (for-each delete-file-recursively
417 (find-files "doc" "README\\.(build\\.msvc|NT|Win)"))
418 #t))
419 (add-after 'configure 'delete-init-scripts
420 (lambda _
421 (delete-file-recursively "gen/install/misc")
422 #t))
423 (add-before 'build 'set-build-environment-variables
424 (lambda _
425 ;; ‘isql’ needs to run & find libfbclient.so during the build.
426 ;; This doubles as a rudimentary test in lieu of a test suite.
427 (setenv "LD_LIBRARY_PATH"
428 (string-append (assoc-ref %build-inputs "icu4c") "/lib"))
429 #t))
430 (add-before 'install 'keep-embedded-debug-symbols
431 (lambda _
432 ;; Let the gnu-build-system separate & deal with them later.
433 ;; XXX Upstream would use ‘--strip-unneeded’, shaving a whole
434 ;; megabyte off Guix's 7.7M libEngine12.so, for example.
435 (substitute* "gen/Makefile.install"
436 (("readelf") "false"))
437 #t))
438 (add-after 'install 'prune-undesirable-files
439 (lambda* (#:key outputs #:allow-other-keys)
440 (let ((out (assoc-ref outputs "out")))
441 (with-directory-excursion out
442 ;; Remove example binaries.
443 (for-each delete-file-recursively
444 (find-files "." "example"))
445 ;; Delete (now-)empty directories.
446 (for-each rmdir
447 (list "include/firebird/impl"
448 "lib/firebird/plugins/udr"))
449 #t)))))))
450 (inputs
451 `(("boost" ,boost)
452 ("editline" ,editline)
453 ("icu4c" ,icu4c-67)
454 ("libtommath" ,libtommath)
455 ("ncurses" ,ncurses)
456 ("zlib" ,zlib)))
457 (home-page "https://www.firebirdsql.org")
458 (synopsis "Relational database with many ANSI SQL standard features")
459 (description
460 "Firebird is an SQL @acronym{RDBMS, relational database management system}
461 with rich support for ANSI SQL (e.g., @code{INSERT...RETURNING}) including
462 @acronym{UDFs, user-defined functions} and PSQL stored procedures, cursors, and
463 triggers. Transactions provide full ACID-compliant referential integrity.
464
465 The database requires very little manual maintenance once set up, making it
466 ideal for small business or embedded use.
467
468 When installed as a traditional local or remote (network) database server,
469 Firebird can grow to terabyte scale with proper tuning---although PostgreSQL
470 may be a better choice for such very large environments.
471
472 Firebird can also be embedded into stand-alone applications that don't want or
473 need a full client & server. Used in this manner, it offers richer SQL support
474 than SQLite as well as the option to seamlessly migrate to a client/server
475 database later.")
476 (properties
477 `((lint-hidden-cve . ("CVE-2017-6369"))))
478 (license
479 ;; See doc/license/README.license.usage.txt for rationale & details.
480 (list license:bsd-3 ; src/common/sha2/
481 license:bsd-4 ; src/common/enc.cpp
482 license:gpl2+ ; builds/posix/make.defaults
483 (license:non-copyleft "file:///builds/install/misc/IPLicense.txt"
484 "InterBase Public License v1.0")
485 (license:non-copyleft "file:///builds/install/misc/IDPLicense.txt"
486 "Initial Developer's Public License v1.0")
487 license:lgpl2.1 ; exception for OSI-compatible licences
488 license:mpl1.1 ; examples/interfaces/0{6,8}*.cpp
489 license:public-domain)))) ; including files without explicit licence
490
491 (define-public leveldb
492 (package
493 (name "leveldb")
494 (version "1.22")
495 (source (origin
496 (method git-fetch)
497 (uri (git-reference
498 (url "https://github.com/google/leveldb")
499 (commit version)))
500 (file-name (git-file-name name version))
501 (sha256
502 (base32
503 "0qrnhiyq7r4wa1a4wi82zgns35smj94mcjsc7kfs1k6ia9ys79z7"))))
504 (build-system cmake-build-system)
505 (arguments
506 `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON" "-DLEVELDB_BUILD_TESTS=ON")))
507 (inputs
508 `(("snappy" ,snappy)))
509 (home-page "https://github.com/google/leveldb")
510 (synopsis "Fast key-value storage library")
511 (description
512 "LevelDB is a fast key-value storage library that provides an ordered
513 mapping from string keys to string values.")
514 (license license:bsd-3)))
515
516 (define-public memcached
517 (package
518 (name "memcached")
519 (version "1.5.20")
520 (source
521 (origin
522 (method url-fetch)
523 (uri (string-append
524 "https://memcached.org/files/memcached-" version ".tar.gz"))
525 (sha256
526 (base32 "1r511qr95q0ywdaql3pdjiwzkfqxhhfzb13ilvl7mznfm4iv1myg"))))
527 (build-system gnu-build-system)
528 (inputs
529 `(("libevent" ,libevent)
530 ("cyrus-sasl" ,cyrus-sasl)))
531 (home-page "https://memcached.org/")
532 (synopsis "In-memory caching service")
533 (description "Memcached is an in-memory key-value store. It has a small
534 and generic API, and was originally intended for use with dynamic web
535 applications.")
536 (license license:bsd-3)))
537
538 (define-public libmemcached
539 (package
540 (name "libmemcached")
541 (version "1.0.18")
542 ;; We build from the sources since we want to build the extra HTML
543 ;; documentation which is not included with the release.
544 (source (origin
545 (method bzr-fetch)
546 (uri (bzr-reference
547 (url "lp:libmemcached/1.0")
548 (revision (string-append "tag:" version))))
549 (file-name (string-append name "-" version "-checkout"))
550 (sha256
551 (base32
552 "1842s4dxdh21gdr46q4dgxigidcs6dkqnbnqjwb9l8r0bqx5nb10"))
553 (patches
554 (search-patches "libmemcached-build-with-gcc7.patch"))))
555 (build-system gnu-build-system)
556 (native-inputs
557 `(("memcached" ,memcached)
558 ("libtool" ,libtool)
559 ("autoconf" ,autoconf)
560 ("automake" ,automake)
561 ("bison" ,bison)
562 ("flex" ,flex)
563 ("perl" ,perl)
564 ("python-sphinx" ,python-sphinx))) ;to build the HTML doc.
565 (inputs
566 `(("libevent" ,libevent)
567 ("cyrus-sasl" ,cyrus-sasl)))
568 (outputs '("out" "doc"))
569 (arguments
570 '(#:phases
571 (modify-phases %standard-phases
572 (add-before 'bootstrap 'fix-configure.ac
573 ;; Move the AC_CONFIG_AUX_DIR macro use under AC_INIT, otherwise we
574 ;; get the error ``configure: error: cannot find install-sh,
575 ;; install.sh, or shtool in "." "./.." "./../.."`` (see:
576 ;; https://debbugs.gnu.org/cgi/bugreport.cgi?bug=19539 and
577 ;; https://bugs.launchpad.net/libmemcached/+bug/1803922).
578 (lambda _
579 (delete-file "bootstrap.sh") ;not useful in the context of Guix
580 (substitute* "configure.ac"
581 (("^AC_CONFIG_AUX_DIR\\(\\[build-aux\\]\\).*") "")
582 (("(^AC_INIT.*)" anchor)
583 (string-append anchor "AC_CONFIG_AUX_DIR([build-aux])\n")))
584 #t))
585 (add-before 'bootstrap 'disable-failing-tests
586 ;; See: https://bugs.launchpad.net/libmemcached/+bug/1803926
587 (lambda _
588 ;; Mark some heavily failing test suites as expected to fail.
589 (substitute* "Makefile.am"
590 (("(XFAIL_TESTS =[^\n]*)" xfail_tests)
591 (string-append xfail_tests " tests/testudp"
592 " tests/libmemcached-1.0/testapp"
593 " tests/libmemcached-1.0/testsocket")))
594 ;; Disable two tests of the unittest test suite.
595 (substitute* "libtest/unittest.cc"
596 ((".*echo_fubar_BINARY \\},.*") "")
597 ((".*application_doesnotexist_BINARY \\},.*") ""))
598 #t))
599 (add-after 'disable-dns-tests 'build-and-install-html-doc
600 (lambda* (#:key outputs #:allow-other-keys)
601 (let ((html (string-append (assoc-ref outputs "doc")
602 "/share/doc/libmemcached/html/")))
603 (invoke "make" "install-html")
604 ;; Cleanup useless files.
605 (for-each delete-file-recursively
606 (map (lambda (x) (string-append html x))
607 '("_sources" ".doctrees" ".buildinfo"))))
608 #t)))))
609 (home-page "https://libmemcached.org/")
610 (synopsis "C++ library for memcached")
611 (description "libMemcached is a library to use memcached in C/C++
612 applications. It comes with a complete reference guide and documentation of
613 the API, and provides features such as:
614 @itemize
615 @item Asynchronous and synchronous transport support
616 @item Consistent hashing and distribution
617 @item Tunable hashing algorithm to match keys
618 @item Access to large object support
619 @item Local replication
620 @end itemize")
621 (license license:bsd-3)))
622
623 (define-public python-pylibmc
624 (package
625 (name "python-pylibmc")
626 (version "1.6.1")
627 (source
628 (origin
629 (method url-fetch)
630 (uri (pypi-uri "pylibmc" version))
631 (sha256
632 (base32 "1sg7d9j0v6g3xg3finf4l1hb72c13vcyyi6rqrc9shbx903d93ca"))))
633 (build-system python-build-system)
634 (arguments
635 '(#:phases
636 (modify-phases %standard-phases
637 (add-before 'check 'start-memcached-daemon
638 ;; The test suite requires a memcached server.
639 (lambda _
640 (invoke "memcached" "-d"))))))
641 (native-inputs
642 `(("memcached" ,memcached)
643 ("python-nose" ,python-nose)))
644 (inputs
645 `(("libmemcached" ,libmemcached)
646 ("zlib" ,zlib)
647 ("cyrus-sasl" ,cyrus-sasl)))
648 (home-page "http://sendapatch.se/projects/pylibmc/")
649 (synopsis "Python client for memcached")
650 (description
651 "@code{pylibmc} is a client in Python for memcached. It is a wrapper
652 around TangentOrg’s libmemcached library, and can be used as a drop-in
653 replacement for the code@{python-memcached} library.")
654 (license license:bsd-3)))
655
656 (define-public python2-pylibmc
657 (package-with-python2 python-pylibmc))
658
659 (define-public mongodb
660 (package
661 (name "mongodb")
662 (version "3.4.10")
663 (source (origin
664 (method url-fetch)
665 (uri (string-append "https://github.com/mongodb/mongo/archive/r"
666 version ".tar.gz"))
667 (file-name (string-append name "-" version ".tar.gz"))
668 (sha256
669 (base32 "0676lvkljj7a5hdhv78dbykqnqrj9lbn9799mi84b8vbnzsq961r"))
670 (modules '((guix build utils)))
671 (snippet
672 '(begin
673 (for-each (lambda (dir)
674 (delete-file-recursively
675 (string-append "src/third_party/" dir)))
676 '("pcre-8.41" "scons-2.5.0" "snappy-1.1.3"
677 "valgrind-3.11.0" "wiredtiger"
678 "yaml-cpp-0.5.3" "zlib-1.2.8"))
679 #t))
680 (patches
681 (list
682 (search-patch "mongodb-support-unknown-linux-distributions.patch")))))
683 (build-system scons-build-system)
684 (inputs
685 `(("openssl" ,openssl-1.0)
686 ("pcre" ,pcre)
687 ,@(match (%current-system)
688 ((or "x86_64-linux" "aarch64-linux" "mips64el-linux")
689 `(("wiredtiger" ,wiredtiger)))
690 (_ `()))
691 ("yaml-cpp" ,yaml-cpp)
692 ("zlib" ,zlib)
693 ("snappy" ,snappy)))
694 (native-inputs
695 `(("valgrind" ,valgrind)
696 ("perl" ,perl)
697 ("python" ,python-2)
698 ("python2-pymongo" ,python2-pymongo)
699 ("python2-pyyaml" ,python2-pyyaml)
700 ("tzdata" ,tzdata-for-tests)))
701 (arguments
702 `(#:scons ,scons-python2
703 #:phases
704 (let ((common-options
705 `(;; "--use-system-tcmalloc" TODO: Missing gperftools
706 "--use-system-pcre"
707 ;; wiredtiger is 64-bit only
708 ,,(if (any (cute string-prefix? <> (or (%current-target-system)
709 (%current-system)))
710 '("i686-linux" "armhf-linux"))
711 ``"--wiredtiger=off"
712 ``"--use-system-wiredtiger")
713 ;; TODO
714 ;; build/opt/mongo/db/fts/unicode/string.o failed: Error 1
715 ;; --use-system-boost
716 "--use-system-snappy"
717 "--use-system-zlib"
718 "--use-system-valgrind"
719 ;; "--use-system-stemmer" TODO: Missing relevant package
720 "--use-system-yaml"
721 "--disable-warnings-as-errors"
722 ,(format #f "--jobs=~a" (parallel-job-count))
723 "--ssl")))
724 (modify-phases %standard-phases
725 (add-after 'unpack 'patch
726 (lambda _
727 ;; Remove use of GNU extensions in parse_number_test.cpp, to
728 ;; allow compiling with GCC 7 or later
729 ;; https://jira.mongodb.org/browse/SERVER-28063
730 (substitute* "src/mongo/base/parse_number_test.cpp"
731 (("0xabcab\\.defdefP-10")
732 "687.16784283419838"))
733 #t))
734 (add-after 'unpack 'scons-propagate-environment
735 (lambda _
736 ;; Modify the SConstruct file to arrange for
737 ;; environment variables to be propagated.
738 (substitute* "SConstruct"
739 (("^env = Environment\\(")
740 "env = Environment(ENV=os.environ, "))
741 #t))
742 (add-after 'unpack 'create-version-file
743 (lambda _
744 (call-with-output-file "version.json"
745 (lambda (port)
746 (display ,(simple-format #f "{
747 \"version\": \"~A\"
748 }" version) port)))
749 #t))
750 (replace 'build
751 (lambda _
752 (apply invoke `("scons"
753 ,@common-options
754 "mongod" "mongo" "mongos"))))
755 (replace 'check
756 (lambda* (#:key tests? inputs #:allow-other-keys)
757 (setenv "TZDIR"
758 (string-append (assoc-ref inputs "tzdata")
759 "/share/zoneinfo"))
760 (when tests?
761 ;; Note that with the tests, especially the unittests, the
762 ;; build can take up to ~45GB of space, as many tests are
763 ;; individual executable files, with some being hundreds of
764 ;; megabytes in size.
765 (apply invoke `("scons" ,@common-options "dbtest" "unittests"))
766 (substitute* "build/unittests.txt"
767 ;; TODO: Don't run the async_stream_test, as it hangs
768 (("^build\\/opt\\/mongo\\/executor\\/async\\_stream\\_test\n$")
769 "")
770 ;; TODO: This test fails
771 ;; Expected 0UL != disks.size() (0 != 0) @src/mongo/util/procparser_test.cpp:476
772 (("^build\\/opt\\/mongo\\/util\\/procparser\\_test\n$")
773 ""))
774 (invoke "python" "buildscripts/resmoke.py"
775 "--suites=dbtest,unittests"
776 (format #f "--jobs=~a" (parallel-job-count))))
777 #t))
778 (replace 'install
779 (lambda* (#:key outputs #:allow-other-keys)
780 (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
781 (install-file "mongod" bin)
782 (install-file "mongos" bin)
783 (install-file "mongo" bin))
784 #t))))))
785 (home-page "https://www.mongodb.org/")
786 (synopsis "High performance and high availability document database")
787 (description
788 "Mongo is a high-performance, high availability, schema-free
789 document-oriented database. A key goal of MongoDB is to bridge the gap
790 between key/value stores (which are fast and highly scalable) and traditional
791 RDBMS systems (which are deep in functionality).")
792 (license (list license:agpl3
793 ;; Some parts are licensed under the Apache License
794 license:asl2.0))))
795
796 (define-public mycli
797 (package
798 (name "mycli")
799 (version "1.22.2")
800 (source
801 (origin
802 (method url-fetch)
803 (uri (pypi-uri "mycli" version))
804 (sha256
805 (base32 "1lq2x95553vdmhw13cxcgsd2g2i32izhsb7hxd4m1iwf9b3msbpv"))))
806 (build-system python-build-system)
807 (arguments
808 `(#:tests? #f)) ; tests expect a running MySQL
809 (propagated-inputs
810 `(("python-cli-helpers" ,python-cli-helpers)
811 ("python-click" ,python-click)
812 ("python-configobj" ,python-configobj)
813 ("python-cryptography" ,python-cryptography)
814 ("python-prompt-toolkit" ,python-prompt-toolkit)
815 ("python-pygments" ,python-pygments)
816 ("python-pymysql" ,python-pymysql)
817 ("python-sqlparse" ,python-sqlparse)))
818 (home-page "http://mycli.net")
819 (synopsis
820 "Terminal Client for MySQL with AutoCompletion and Syntax Highlighting")
821 (description
822 "MyCLI is a command line interface for MySQL, MariaDB, and Percona with
823 auto-completion and syntax highlighting.")
824 (license license:bsd-3)))
825
826 ;; XXX When updating, check whether boost-for-mysql is still needed.
827 ;; It might suffice to patch ‘cmake/boost.cmake’ as done in the past.
828 (define-public mysql
829 (package
830 (name "mysql")
831 (version "5.7.27")
832 (source (origin
833 (method url-fetch)
834 (uri (list (string-append
835 "https://dev.mysql.com/get/Downloads/MySQL-"
836 (version-major+minor version) "/"
837 name "-" version ".tar.gz")
838 (string-append
839 "https://downloads.mysql.com/archives/get/file/"
840 name "-" version ".tar.gz")))
841 (sha256
842 (base32
843 "1fhv16zr46pxm1j8vb8x8mh3nwzglg01arz8gnazbmjqldr5idpq"))))
844 (build-system cmake-build-system)
845 (arguments
846 `(#:configure-flags
847 '("-DBUILD_CONFIG=mysql_release"
848 "-DWITH_SSL=system"
849 "-DWITH_ZLIB=system"
850 "-DDEFAULT_CHARSET=utf8"
851 "-DDEFAULT_COLLATION=utf8_general_ci"
852 "-DMYSQL_DATADIR=/var/lib/mysql"
853 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
854 "-DINSTALL_INFODIR=share/mysql/docs"
855 "-DINSTALL_MANDIR=share/man"
856 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
857 "-DINSTALL_SCRIPTDIR=bin"
858 "-DINSTALL_INCLUDEDIR=include/mysql"
859 "-DINSTALL_DOCREADMEDIR=share/mysql/docs"
860 "-DINSTALL_SUPPORTFILESDIR=share/mysql"
861 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
862 "-DINSTALL_DOCDIR=share/mysql/docs"
863 "-DINSTALL_SHAREDIR=share/mysql"
864 ;; Get rid of test data.
865 "-DINSTALL_MYSQLTESTDIR="
866 "-DINSTALL_SQLBENCHDIR=")
867 #:phases (modify-phases %standard-phases
868 (add-after
869 'install 'remove-extra-binaries
870 (lambda* (#:key outputs #:allow-other-keys)
871 (let ((out (assoc-ref outputs "out")))
872 ;; Remove the 3 *_embedded files, which weigh in at
873 ;; 14 MiB each.
874 (for-each delete-file
875 (find-files (string-append out "/bin")
876 "_embedded$"))
877 #t))))))
878 (native-inputs
879 `(("bison" ,bison)
880 ("perl" ,perl)
881 ("pkg-config" ,pkg-config)))
882 (inputs
883 `(("boost" ,boost-for-mysql)
884 ("libaio" ,libaio)
885 ("libtirpc" ,libtirpc)
886 ("ncurses" ,ncurses)
887 ("openssl" ,openssl)
888 ("rpcsvc-proto" ,rpcsvc-proto) ; rpcgen
889 ("zlib" ,zlib)))
890 (home-page "https://www.mysql.com/")
891 (synopsis "Fast, easy to use, and popular database")
892 (description
893 "MySQL is a fast, reliable, and easy to use relational database
894 management system that supports the standardized Structured Query
895 Language.")
896 (license license:gpl2)))
897
898 (define-public mariadb
899 (package
900 (name "mariadb")
901 (version "10.5.6")
902 (source (origin
903 (method url-fetch)
904 (uri (string-append "https://downloads.mariadb.com/MariaDB"
905 "/mariadb-" version "/source/mariadb-"
906 version ".tar.gz"))
907 (sha256
908 (base32
909 "1i257h0zdypdfj5wkg6ck9pxlkph0jvjs92k22pjr6gnx5lxs1gz"))
910 (modules '((guix build utils)))
911 (snippet
912 '(begin
913 ;; Delete bundled snappy and xz.
914 (delete-file-recursively "storage/tokudb/PerconaFT/third_party")
915 (substitute* "storage/tokudb/PerconaFT/CMakeLists.txt"
916 ;; This file checks that the bundled sources are present and
917 ;; declares build procedures for them.
918 (("^include\\(TokuThirdParty\\)") ""))
919 (substitute* "storage/tokudb/PerconaFT/ft/CMakeLists.txt"
920 ;; Don't attempt to use the procedures we just removed.
921 ((" build_lzma build_snappy") ""))
922
923 ;; Preserve CMakeLists.txt for these.
924 (for-each (lambda (file)
925 (unless (string-suffix? "CMakeLists.txt" file)
926 (delete-file file)))
927 (append (find-files "extra/wolfssl")
928 (find-files "zlib")))
929 #t))))
930 (build-system cmake-build-system)
931 (outputs '("out" "lib" "dev"))
932 (arguments
933 `(#:configure-flags
934 (list
935 "-DBUILD_CONFIG=mysql_release"
936 ;; Linking with libarchive fails, like this:
937
938 ;; ld: /gnu/store/...-libarchive-3.2.2/lib/libarchive.a(archive_entry.o):
939 ;; relocation R_X86_64_32 against `.bss' can not be used when
940 ;; making a shared object; recompile with -fPIC
941
942 ;; For now, disable the features that that use libarchive (xtrabackup).
943 "-DWITH_LIBARCHIVE=OFF"
944
945 ;; Disable the TokuDB engine, because its test suite frequently fails,
946 ;; and loading it crashes the server: <https://bugs.gnu.org/35521>.
947 "-DTOKUDB_OK=OFF"
948
949 ;; Ensure the system libraries are used.
950 "-DWITH_JEMALLOC=yes"
951 "-DWITH_PCRE=system"
952 "-DWITH_SSL=system"
953 "-DWITH_ZLIB=system"
954
955 "-DDEFAULT_CHARSET=utf8"
956 "-DDEFAULT_COLLATION=utf8_general_ci"
957 "-DMYSQL_DATADIR=/var/lib/mysql"
958 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
959 (string-append "-DCMAKE_INSTALL_PREFIX=" (assoc-ref %outputs "lib"))
960 (string-append "-DCMAKE_INSTALL_RPATH=" (assoc-ref %outputs "lib")
961 "/lib")
962 (string-append "-DINSTALL_INFODIR=" (assoc-ref %outputs "out")
963 "/share/mysql/docs")
964 (string-append "-DINSTALL_MANDIR=" (assoc-ref %outputs "out")
965 "/share/man")
966 (string-append "-DINSTALL_SCRIPTDIR=" (assoc-ref %outputs "out") "/bin")
967 (string-append "-DINSTALL_BINDIR=" (assoc-ref %outputs "out") "/bin")
968 "-DCMAKE_INSTALL_LIBDIR=lib"
969 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
970 (string-append "-DINSTALL_INCLUDEDIR=" (assoc-ref %outputs "dev")
971 "/include/mysql")
972 (string-append "-DINSTALL_DOCREADMEDIR=" (assoc-ref %outputs "out")
973 "/share/mysql/docs")
974 (string-append "-DINSTALL_DOCDIR=" (assoc-ref %outputs "out")
975 "/share/mysql/docs")
976 (string-append "-DINSTALL_SUPPORTFILESDIR=" (assoc-ref %outputs "out")
977 "/share/mysql/support-files")
978 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
979 "-DINSTALL_SHAREDIR=share")
980 #:phases
981 (modify-phases %standard-phases
982 (add-after 'unpack 'adjust-output-references
983 (lambda _
984 ;; The build system invariably prepends $CMAKE_INSTALL_PREFIX
985 ;; to other variables such as $INSTALL_INCLUDEDIR, which does
986 ;; not work when the latter uses an absolute file name.
987 (substitute* "libmariadb/mariadb_config/mariadb_config.c.in"
988 (("@CMAKE_INSTALL_PREFIX@/@INSTALL_INCLUDEDIR@")
989 "@INSTALL_INCLUDEDIR@"))
990 (substitute* "libmariadb/mariadb_config/libmariadb.pc.in"
991 (("\\$\\{prefix\\}/@INSTALL_INCLUDEDIR@")
992 "@INSTALL_INCLUDEDIR@"))
993 (substitute* "include/CMakeLists.txt"
994 (("\\\\\\$\\{CMAKE_INSTALL_PREFIX\\}/\\$\\{INSTALL_INCLUDEDIR\\}")
995 "${INSTALL_INCLUDEDIR}"))
996 #t))
997 (add-after 'unpack 'adjust-tests
998 (lambda _
999 (let ((disabled-tests
1000 '(;; These fail because root@hostname == root@localhost in
1001 ;; the build environment, causing a user count mismatch.
1002 ;; See <https://jira.mariadb.org/browse/MDEV-7761>.
1003 "funcs_1.is_columns_mysql"
1004 "main.join_cache"
1005 "main.explain_non_select"
1006 "main.stat_tables"
1007 "main.stat_tables_innodb"
1008 "roles.acl_statistics"
1009
1010 ;; This file contains a time bomb which makes it fail after
1011 ;; 2030-12-31. See <https://bugs.gnu.org/34351> for details.
1012 "main.mysqldump"))
1013
1014 ;; This file contains a list of known-flaky tests for this
1015 ;; release. Append our own items.
1016 (unstable-tests (open-file "mysql-test/unstable-tests" "a")))
1017 (for-each (lambda (test)
1018 (format unstable-tests "~a : ~a\n"
1019 test "Disabled in Guix"))
1020 disabled-tests)
1021 (close-port unstable-tests)
1022
1023 ;; XXX: These fail because they expect a latin1 charset and
1024 ;; collation. See <https://jira.mariadb.org/browse/MDEV-21264>.
1025 (substitute* '("mysql-test/main/gis_notembedded.result"
1026 "mysql-test/main/system_mysql_db.result")
1027 (("latin1_swedish_ci") "utf8_general_ci")
1028 (("\tlatin1") "\tutf8"))
1029
1030 (substitute* "mysql-test/suite/binlog/t/binlog_mysqlbinlog_stop_never.test"
1031 (("/bin/bash")
1032 (which "bash")))
1033
1034 (substitute* "mysql-test/mysql-test-run.pl"
1035 (("/bin/ls") (which "ls"))
1036 (("/bin/sh") (which "sh")))
1037 #t)))
1038 (add-before 'configure 'disable-plugins
1039 (lambda _
1040 (let ((disable-plugin (lambda (name)
1041 (call-with-output-file
1042 (string-append "plugin/" name
1043 "/CMakeLists.txt")
1044 (lambda (port)
1045 (format port "\n")))))
1046 (disabled-plugins '(;; XXX: Causes a test failure.
1047 "disks")))
1048 (for-each disable-plugin disabled-plugins)
1049 #t)))
1050 (replace 'check
1051 (lambda* (#:key (tests? #t) #:allow-other-keys)
1052 (if tests?
1053 (with-directory-excursion "mysql-test"
1054 (invoke "./mtr" "--verbose"
1055 "--retry=3"
1056 "--testcase-timeout=40"
1057 "--suite-timeout=600"
1058 "--parallel" (number->string (parallel-job-count))
1059 ;; Skip the replication tests: they are very I/O
1060 ;; intensive and frequently causes indeterministic
1061 ;; failures even on powerful hardware.
1062 "--skip-rpl"
1063 "--skip-test-list=unstable-tests"))
1064 (format #t "test suite not run~%"))
1065 #t))
1066 (add-after
1067 'install 'post-install
1068 (lambda* (#:key inputs outputs #:allow-other-keys)
1069 (let* ((out (assoc-ref outputs "out"))
1070 (dev (assoc-ref outputs "dev"))
1071 (lib (assoc-ref outputs "lib"))
1072 (openssl (assoc-ref inputs "openssl")))
1073 (substitute* (list (string-append out "/bin/mariadb-install-db")
1074 (string-append out "/bin/mysql_install_db"))
1075 (("basedir=\"\"")
1076 (string-append "basedir=\"" out "\""))
1077 (("\\$basedir/share/mysql")
1078 (string-append lib "/share/mysql")))
1079
1080 ;; Remove unneeded files for testing.
1081 (with-directory-excursion lib
1082 (for-each delete-file-recursively
1083 '("mysql-test" "sql-bench"))
1084 ;; And static libraries.
1085 (for-each delete-file (find-files "lib" "\\.a$")))
1086 (with-directory-excursion out
1087 (delete-file "share/man/man1/mysql-test-run.pl.1")
1088 ;; Delete huge and unnecessary executables.
1089 (for-each delete-file (find-files "bin" "test$")))
1090 (mkdir-p (string-append dev "/share"))
1091 (mkdir-p (string-append dev "/bin"))
1092 (rename-file (string-append lib "/bin/mariadbd")
1093 (string-append out "/bin/mariadbd"))
1094 (rename-file (string-append lib "/bin/mysqld")
1095 (string-append out "/bin/mysqld"))
1096 (mkdir-p (string-append dev "/lib"))
1097 (rename-file (string-append lib "/lib/pkgconfig")
1098 (string-append dev "/lib/pkgconfig"))
1099 (rename-file (string-append lib "/bin/mariadb_config")
1100 (string-append dev "/bin/mariadb_config"))
1101 (rename-file (string-append out "/bin/mysql_config")
1102 (string-append dev "/bin/mysql_config"))
1103
1104 ;; Embed an absolute reference to OpenSSL in mysql_config
1105 ;; and the pkg-config file to avoid propagation.
1106 ;; XXX: how to do this for mariadb_config.c.in?
1107 (substitute* (list (string-append dev "/bin/mysql_config")
1108 (string-append dev "/lib/pkgconfig/mariadb.pc"))
1109 (("-lssl -lcrypto" all)
1110 (string-append "-L" openssl "/lib " all)))
1111
1112 #t))))))
1113 (native-inputs
1114 `(("bison" ,bison)
1115 ("perl" ,perl)))
1116 (inputs
1117 `(("jemalloc" ,jemalloc)
1118 ("libaio" ,libaio)
1119 ("libxml2" ,libxml2)
1120 ("ncurses" ,ncurses)
1121 ("openssl" ,openssl)
1122 ("pam" ,linux-pam)
1123 ("pcre2" ,pcre2)
1124 ("xz" ,xz)
1125 ("zlib" ,zlib)))
1126 ;; The test suite is very resource intensive and can take more than three
1127 ;; hours on a x86_64 system. Give slow and busy machines some leeway.
1128 (properties '((timeout . 64800))) ;18 hours
1129 (home-page "https://mariadb.org/")
1130 (synopsis "SQL database server")
1131 (description
1132 "MariaDB is a multi-user and multi-threaded SQL database server, designed
1133 as a drop-in replacement of MySQL.")
1134 (license license:gpl2)))
1135
1136 (define-public mariadb-connector-c
1137 (package
1138 (name "mariadb-connector-c")
1139 (version "3.1.11")
1140 (source
1141 (origin
1142 (method url-fetch)
1143 (uri (string-append
1144 "https://downloads.mariadb.org/f/connector-c-" version
1145 "/mariadb-connector-c-" version "-src.tar.gz"
1146 "/from/https%3A//mirrors.ukfast.co.uk/sites/mariadb/?serve"))
1147 (sha256
1148 (base32 "03svzahdf7czjlm695c11r4bfd04qdqgx8r1vkpr1zlkjhwnqvry"))))
1149 (inputs
1150 `(("openssl" ,openssl)))
1151 (build-system cmake-build-system)
1152 (arguments
1153 '(#:tests? #f)) ; no tests
1154 (home-page "https://mariadb.com/kb/en/mariadb-connector-c/")
1155 (synopsis "Client library to connect to MySQL or MariaDB")
1156 (description "The MariaDB Connector/C is used to connect applications
1157 developed in C/C++ to MariaDB and MySQL databases.")
1158 (license license:lgpl2.1+)))
1159
1160 ;; Don't forget to update the other postgresql packages when upgrading this one.
1161 (define-public postgresql
1162 (package
1163 (name "postgresql")
1164 (version "10.13")
1165 (source (origin
1166 (method url-fetch)
1167 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1168 version "/postgresql-" version ".tar.bz2"))
1169 (sha256
1170 (base32
1171 "1qal0yp7a90yzya7hl56gsmw5fvacplrdhpn7h9gnbyr1i2iyw2d"))
1172 (patches (search-patches "postgresql-disable-resolve_symlinks.patch"))))
1173 (build-system gnu-build-system)
1174 (arguments
1175 `(#:configure-flags '("--with-uuid=e2fs" "--with-openssl")
1176 #:phases
1177 (modify-phases %standard-phases
1178 (add-before 'configure 'patch-/bin/sh
1179 (lambda _
1180 ;; Refer to the actual shell.
1181 (substitute* '("src/bin/pg_ctl/pg_ctl.c"
1182 "src/bin/psql/command.c")
1183 (("/bin/sh") (which "sh")))
1184 #t))
1185 (add-after 'build 'build-contrib
1186 (lambda _
1187 (invoke "make" "-C" "contrib")))
1188 (add-after 'install 'install-contrib
1189 (lambda _
1190 (invoke "make" "-C" "contrib" "install"))))))
1191 (inputs
1192 `(("readline" ,readline)
1193 ("libuuid" ,util-linux "lib")
1194 ("openssl" ,openssl)
1195 ("zlib" ,zlib)))
1196 (home-page "https://www.postgresql.org/")
1197 (synopsis "Powerful object-relational database system")
1198 (description
1199 "PostgreSQL is a powerful object-relational database system. It is fully
1200 ACID compliant, has full support for foreign keys, joins, views, triggers, and
1201 stored procedures (in multiple languages). It includes most SQL:2008 data
1202 types, including INTEGER, NUMERIC, BOOLEAN, CHAR, VARCHAR, DATE, INTERVAL, and
1203 TIMESTAMP. It also supports storage of binary large objects, including
1204 pictures, sounds, or video.")
1205 (license (license:x11-style "file://COPYRIGHT"))))
1206
1207 (define-public postgresql-10 postgresql)
1208
1209 (define-public postgresql-11
1210 (package
1211 (inherit postgresql)
1212 (name "postgresql")
1213 (version "11.6")
1214 (source (origin
1215 (method url-fetch)
1216 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1217 version "/postgresql-" version ".tar.bz2"))
1218 (sha256
1219 (base32
1220 "0w1iq488kpzfgfnlw4k32lz5by695mpnkq461jrgsr99z5zlz4j9"))))))
1221
1222 (define-public postgresql-9.6
1223 (package
1224 (inherit postgresql)
1225 (name "postgresql")
1226 (version "9.6.16")
1227 (source (origin
1228 (method url-fetch)
1229 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1230 version "/postgresql-" version ".tar.bz2"))
1231 (sha256
1232 (base32
1233 "1rr2dgv4ams8r2lp13w85c77rkmzpb88fjlc28mvlw6zq2fblv2w"))))))
1234
1235 (define-public python-pymysql
1236 (package
1237 (name "python-pymysql")
1238 (version "0.9.3")
1239 (source
1240 (origin
1241 (method url-fetch)
1242 (uri (pypi-uri "PyMySQL" version))
1243 (sha256
1244 (base32 "1ry8lxgdc1p3k7gbw20r405jqi5lvhi5wk83kxdbiv8xv3f5kh6q"))))
1245 (build-system python-build-system)
1246 (native-inputs
1247 `(("python-unittest2" ,python-unittest2)))
1248 (inputs
1249 `(("python-cryptography" ,python-cryptography)))
1250 (arguments
1251 `(#:tests? #f)) ; tests expect a running MySQL
1252 (home-page "https://github.com/PyMySQL/PyMySQL/")
1253 (synopsis "Pure-Python MySQL driver")
1254 (description
1255 "PyMySQL is a pure-Python MySQL client library, based on PEP 249.
1256 Most public APIs are compatible with @command{mysqlclient} and MySQLdb.")
1257 (license license:expat)))
1258
1259 (define-public python2-pymysql
1260 (package-with-python2 python-pymysql))
1261
1262 (define-public qdbm
1263 (package
1264 (name "qdbm")
1265 (version "1.8.78")
1266 (source
1267 (origin
1268 (method url-fetch)
1269 (uri (string-append "http://fallabs.com/" name "/"
1270 name "-" version ".tar.gz"))
1271 (sha256
1272 (base32
1273 "0gmpvhn02pkq280ffmn4da1g4mdr1xxz7l80b7y4n7km1mrzwrml"))))
1274 (build-system gnu-build-system)
1275 (arguments
1276 `(#:configure-flags (list (string-append "LDFLAGS=-Wl,-rpath="
1277 (assoc-ref %outputs "out")
1278 "/lib"))
1279 #:make-flags (list "CFLAGS=-fPIC")))
1280 (home-page "https://fallabs.com/qdbm/")
1281 (synopsis "Key-value database")
1282 (description "QDBM is a library of routines for managing a
1283 database. The database is a simple data file containing key-value
1284 pairs. Every key and value is serial bytes with variable length.
1285 Binary data as well as character strings can be used as a key or a
1286 value. There is no concept of data tables or data types. Records are
1287 organized in a hash table or B+ tree.")
1288 (license license:lgpl2.1+)))
1289
1290 (define-public recutils
1291 (package
1292 (name "recutils")
1293 (version "1.8")
1294 (source (origin
1295 (method url-fetch)
1296 (uri (string-append "mirror://gnu/recutils/recutils-"
1297 version ".tar.gz"))
1298 (sha256
1299 (base32
1300 "14xiln4immfsw8isnvwvq0h23f6z0wilpgsc4qzabnrzb5lsx3nz"))))
1301 (build-system gnu-build-system)
1302
1303 (arguments '(#:configure-flags
1304 (list (string-append "--with-bash-headers="
1305 (assoc-ref %build-inputs "bash:include")
1306 "/include/bash"))))
1307
1308 (native-inputs `(("bc" ,bc)
1309 ("bash:include" ,bash "include")
1310 ("check" ,check-0.14)
1311 ("libuuid" ,util-linux)
1312 ("pkg-config" ,pkg-config)))
1313
1314 ;; TODO: Add more optional inputs.
1315 (inputs `(("curl" ,curl)
1316 ("libgcrypt" ,libgcrypt)))
1317 (synopsis "Manipulate plain text files as databases")
1318 (description
1319 "GNU Recutils is a set of tools and libraries for creating and
1320 manipulating text-based, human-editable databases. Despite being text-based,
1321 databases created with Recutils carry all of the expected features such as
1322 unique fields, primary keys, time stamps and more. Many different field
1323 types are supported, as is encryption.")
1324 (license license:gpl3+)
1325 (home-page "https://www.gnu.org/software/recutils/")))
1326
1327 (define-public emacs-recutils
1328 (package
1329 (inherit recutils)
1330 (name "emacs-recutils")
1331 (build-system emacs-build-system)
1332 (arguments
1333 '(#:phases
1334 (modify-phases %standard-phases
1335 (add-after 'unpack 'change-directory
1336 (lambda _
1337 (chdir "etc")
1338 #t)))))
1339 (native-inputs '())
1340 (inputs '())
1341 (synopsis "Emacs mode for working with recutils database files")
1342 (description "This package provides an Emacs major mode @code{rec-mode}
1343 for working with GNU Recutils text-based, human-editable databases. It
1344 supports editing, navigation, and querying of recutils database files
1345 including field and record folding.")))
1346
1347 (define-public rocksdb
1348 (package
1349 (name "rocksdb")
1350 (version "6.11.4")
1351 (source (origin
1352 (method git-fetch)
1353 (uri (git-reference
1354 (url "https://github.com/facebook/rocksdb")
1355 (commit (string-append "v" version))))
1356 (file-name (git-file-name name version))
1357 (sha256
1358 (base32
1359 "0n19p9cd13jg0lnibrzwkxs4xlrhyj3knypkd2ic41arbds0bdnl"))
1360 (modules '((guix build utils)))
1361 (snippet
1362 '(begin
1363 ;; TODO: unbundle gtest.
1364 (delete-file "build_tools/gnu_parallel")
1365 (substitute* "Makefile"
1366 (("build_tools/gnu_parallel") "parallel"))
1367 #t))))
1368 (build-system gnu-build-system)
1369 (arguments
1370 `(#:make-flags (list "CC=gcc" "V=1"
1371 ;; Ceph requires that RTTI is enabled.
1372 "USE_RTTI=1"
1373 "date=1970-01-01" ; build reproducibly
1374 (string-append "INSTALL_PATH="
1375 (assoc-ref %outputs "out"))
1376
1377 ;; Running the full test suite takes hours and require
1378 ;; a lot of disk space. Instead we only run a subset
1379 ;; (see .travis.yml and Makefile).
1380 "ROCKSDBTESTS_END=db_tailing_iter_test")
1381 #:test-target "check_some"
1382 ;; Many tests fail on 32-bit platforms. There are multiple reports about
1383 ;; this upstream, but it's not going to be supported any time soon.
1384 #:tests? (let ((system ,(or (%current-target-system)
1385 (%current-system))))
1386 (or (string-prefix? "x86_64-linux" system)
1387 (string-prefix? "aarch64-linux" system)))
1388 #:phases
1389 (modify-phases %standard-phases
1390 (add-after 'unpack 'patch-Makefile
1391 (lambda _
1392 (substitute* "Makefile"
1393 ;; Don't depend on the static library when installing.
1394 (("install: install-static")
1395 "install: install-shared")
1396 (("#!/bin/sh") (string-append "#!" (which "sh"))))
1397 #t))
1398 (delete 'configure)
1399 ;; The default target is only needed for tests and built on demand.
1400 (delete 'build)
1401 (add-before 'check 'disable-optimizations
1402 (lambda _
1403 ;; Prevent the build from passing '-march=native' to the compiler.
1404 (setenv "PORTABLE" "1")
1405 #t))
1406 (add-before 'check 'disable-failing-tests
1407 (lambda _
1408 (substitute* "Makefile"
1409 ;; These tests reliably fail due to "Too many open files".
1410 (("^[[:blank:]]+env_test[[:blank:]]+\\\\") "\\")
1411 (("^[[:blank:]]+persistent_cache_test[[:blank:]]+\\\\") "\\"))
1412 #t))
1413 (add-after 'check 'build
1414 ;; The default build target is a debug build for tests. The
1415 ;; install target depends on the "shared_lib" release target
1416 ;; so we build it here for clarity.
1417 (lambda* (#:key (make-flags '()) parallel-build? #:allow-other-keys)
1418 (apply invoke "make" "shared_lib"
1419 `(,@(if parallel-build?
1420 `("-j" ,(number->string (parallel-job-count)))
1421 '())
1422 ,@make-flags)))))))
1423 (native-inputs
1424 `(("parallel" ,parallel)
1425 ("perl" ,perl)
1426 ("procps" ,procps)
1427 ("python" ,python-2)
1428 ("which" ,which)))
1429 (inputs
1430 `(("bzip2" ,bzip2)
1431 ("gflags" ,gflags)
1432 ("jemalloc" ,jemalloc)
1433 ("lz4" ,lz4)
1434 ("snappy" ,snappy)
1435 ("zlib" ,zlib)))
1436 (home-page "https://rocksdb.org/")
1437 (synopsis "Persistent key-value store for fast storage")
1438 (description
1439 "RocksDB is a library that forms the core building block for a fast
1440 key-value server, especially suited for storing data on flash drives. It
1441 has a @dfn{Log-Structured-Merge-Database} (LSM) design with flexible tradeoffs
1442 between @dfn{Write-Amplification-Factor} (WAF), @dfn{Read-Amplification-Factor}
1443 (RAF) and @dfn{Space-Amplification-Factor} (SAF). It has multi-threaded
1444 compactions, making it specially suitable for storing multiple terabytes of
1445 data in a single database. RocksDB is partially based on @code{LevelDB}.")
1446 ;; RocksDB is dual licensed under GPL2 and ASL 2.0. Some header
1447 ;; files carry the 3-clause BSD license.
1448 (license (list license:gpl2 license:asl2.0 license:bsd-3))))
1449
1450 (define-public sparql-query
1451 (package
1452 (name "sparql-query")
1453 (version "1.1")
1454 (source (origin
1455 (method git-fetch)
1456 (uri (git-reference
1457 (url "https://github.com/tialaramex/sparql-query")
1458 (commit version)))
1459 (sha256
1460 (base32 "0a84a89idpjhj9w2y3fmvzv7ldps1cva1kxvfmh897k02kaniwxk"))
1461 (file-name (git-file-name name version))))
1462 (build-system gnu-build-system)
1463 (inputs
1464 `(("curl" ,curl)
1465 ("glib" ,glib)
1466 ("libxml2" ,libxml2)
1467 ("ncurses" ,ncurses)
1468 ("readline" ,readline)))
1469 (native-inputs
1470 `(("pkg-config" ,pkg-config)))
1471 (arguments
1472 `(#:make-flags '("CC=gcc")
1473 #:phases
1474 (modify-phases %standard-phases
1475 (delete 'configure)
1476 ;; The Makefile uses git to obtain versioning information. This phase
1477 ;; substitutes the git invocation with the package version.
1478 (add-after 'unpack 'remove-git-dependency
1479 (lambda _
1480 (substitute* "Makefile"
1481 (("^gitrev :=.*$")
1482 (string-append "gitrev = \"v" ,version "\"")))
1483 #t))
1484 ;; The install phase of the Makefile assumes $PREFIX/usr/local/bin.
1485 ;; This replacement does the same thing, except for using $PREFIX/bin
1486 ;; instead.
1487 (replace 'install
1488 (lambda* (#:key outputs #:allow-other-keys)
1489 (let* ((out (assoc-ref outputs "out"))
1490 (bin (string-append out "/bin")))
1491 (install-file "sparql-query" bin)
1492 (symlink (string-append bin "/sparql-query")
1493 (string-append bin "/sparql-update")))
1494 #t))
1495 (replace 'check
1496 (lambda* (#:key make-flags #:allow-other-keys)
1497 (apply invoke "make" `(,@make-flags "scan-test"))
1498 (invoke "./scan-test"))))))
1499 (home-page "https://github.com/tialaramex/sparql-query/")
1500 (synopsis "Command-line tool for accessing SPARQL endpoints over HTTP")
1501 (description "Sparql-query is a command-line tool for accessing SPARQL
1502 endpoints over HTTP. It has been intentionally designed to @code{feel} similar to
1503 tools for interrogating SQL databases. For example, you can enter a query over
1504 several lines, using a semi-colon at the end of a line to indicate the end of
1505 your query. It also supports readline so that you can more easily recall and
1506 edit previous queries, even across sessions. It can be used non-interactively,
1507 for example from a shell script.")
1508 ;; Some files (like scan-sparql.c) contain a GPLv3+ license header, while
1509 ;; others (like sparql-query.c) contain a GPLv2+ license header.
1510 (license (list license:gpl3+))))
1511
1512 (define-public sqitch
1513 (package
1514 (name "sqitch")
1515 (version "1.1.0")
1516 (source
1517 (origin
1518 (method url-fetch)
1519 (uri (string-append
1520 "mirror://cpan/authors/id/D/DW/DWHEELER/App-Sqitch-v"
1521 version ".tar.gz"))
1522 (sha256
1523 (base32 "1ayiwg9kh3w0nbacbcln7h944z94vq5vnnd5diz86033bpbnq57f"))))
1524 (build-system perl-build-system)
1525 (arguments
1526 '(#:phases
1527 (modify-phases %standard-phases
1528 (add-before 'check 'set-check-environment
1529 (lambda _
1530 (setenv "TZ" "UTC")
1531 (setenv "HOME" "/tmp")
1532 #t))
1533 (add-after 'install 'wrap-program
1534 (lambda* (#:key outputs #:allow-other-keys)
1535 (let* ((out (assoc-ref outputs "out"))
1536 (path (getenv "PERL5LIB")))
1537 (wrap-program (string-append out "/bin/sqitch")
1538 `("PERL5LIB" ":" prefix
1539 (,(string-append out "/lib/perl5/site_perl"
1540 ":"
1541 path)))))
1542 #t)))))
1543 (native-inputs
1544 `(("perl-capture-tiny" ,perl-capture-tiny)
1545 ("perl-io-pager" ,perl-io-pager)
1546 ("perl-module-build" ,perl-module-build)
1547 ("perl-module-runtime" ,perl-module-runtime)
1548 ("perl-path-class" ,perl-path-class)
1549 ("perl-test-deep" ,perl-test-deep)
1550 ("perl-test-dir" ,perl-test-dir)
1551 ("perl-test-exception" ,perl-test-exception)
1552 ("perl-test-file" ,perl-test-file)
1553 ("perl-test-file-contents" ,perl-test-file-contents)
1554 ("perl-test-mockmodule" ,perl-test-mockmodule)
1555 ("perl-test-mockobject" ,perl-test-mockobject)
1556 ("perl-test-nowarnings" ,perl-test-nowarnings)
1557 ("perl-test-warn" ,perl-test-warn)))
1558 (inputs
1559 `(("perl-class-xsaccessor" ,perl-class-xsaccessor)
1560 ("perl-clone" ,perl-clone)
1561 ("perl-config-gitlike" ,perl-config-gitlike)
1562 ("perl-datetime" ,perl-datetime)
1563 ("perl-datetime-timezone" ,perl-datetime-timezone)
1564 ("perl-dbd-mysql" ,perl-dbd-mysql)
1565 ("perl-dbd-pg" ,perl-dbd-pg)
1566 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1567 ("perl-dbi" ,perl-dbi)
1568 ("perl-devel-stacktrace" ,perl-devel-stacktrace)
1569 ("perl-encode-locale" ,perl-encode-locale)
1570 ("perl-hash-merge" ,perl-hash-merge)
1571 ("perl-ipc-run3" ,perl-ipc-run3)
1572 ("perl-ipc-system-simple" ,perl-ipc-system-simple)
1573 ("perl-libintl-perl" ,perl-libintl-perl)
1574 ("perl-list-moreutils" ,perl-list-moreutils)
1575 ("perl-moo" ,perl-moo)
1576 ("perl-mysql-config" ,perl-mysql-config)
1577 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
1578 ("perl-path-class" ,perl-path-class)
1579 ("perl-perlio-utf8_strict" ,perl-perlio-utf8_strict)
1580 ("perl-string-formatter" ,perl-string-formatter)
1581 ("perl-string-shellquote" ,perl-string-shellquote)
1582 ("perl-sub-exporter" ,perl-sub-exporter)
1583 ("perl-template-tiny" ,perl-template-tiny)
1584 ("perl-template-toolkit" ,perl-template-toolkit)
1585 ("perl-throwable" ,perl-throwable)
1586 ("perl-try-tiny" ,perl-try-tiny)
1587 ("perl-type-tiny" ,perl-type-tiny)
1588 ("perl-type-tiny-xs" ,perl-type-tiny-xs)
1589 ("perl-uri" ,perl-uri)
1590 ("perl-uri-db" ,perl-uri-db)))
1591 (home-page "https://sqitch.org/")
1592 (synopsis "Database change management tool")
1593 (description
1594 "Sqitch is a standalone change management system for database schemas,
1595 which uses SQL to describe changes.")
1596 (license license:x11)))
1597
1598 (define-public sqlcrush
1599 ;; Unfortunately, there is no proper upstream release and may never be.
1600 (let ((commit "b5f6868f189566a26eecc78d0f0659813c1aa98a")
1601 (revision "1"))
1602 (package
1603 (name "sqlcrush")
1604 (version (git-version "0.1.5" revision commit))
1605 (source (origin
1606 (method git-fetch)
1607 (uri (git-reference
1608 (url "https://github.com/coffeeandscripts/sqlcrush")
1609 (commit commit)))
1610 (file-name (git-file-name name version))
1611 (sha256
1612 (base32
1613 "0x3wy40r93p0jv3nbwj9a77wa4ff697d13r0wffmm7q9h3mzsww8"))))
1614 (build-system python-build-system)
1615 (inputs
1616 `(("python-cryptography" ,python-cryptography)
1617 ("python-psycopg2" ,python-psycopg2)
1618 ("python-pymysql" ,python-pymysql)
1619 ("python-sqlalchemy" ,python-sqlalchemy)))
1620 (home-page "https://github.com/coffeeandscripts/sqlcrush")
1621 (synopsis "Text console-based database viewer and editor")
1622 (description
1623 "SQLcrush lets you view and edit a database directly from the text
1624 console through an ncurses interface. You can explore each table's structure,
1625 browse and edit the contents, add and delete entries, all while tracking your
1626 changes.")
1627 (license license:gpl3+)))) ; no headers, see README.md
1628
1629 (define-public tdb
1630 (package
1631 (name "tdb")
1632 (version "1.4.3")
1633 (source (origin
1634 (method url-fetch)
1635 (uri (string-append "https://www.samba.org/ftp/tdb/tdb-"
1636 version ".tar.gz"))
1637 (sha256
1638 (base32
1639 "06waz0k50c7v3chd08mzp2rv7w4k4q9isbxx3vhlfpx1vy9q61f8"))))
1640 (build-system gnu-build-system)
1641 (arguments
1642 '(#:phases
1643 (modify-phases %standard-phases
1644 (replace 'configure
1645 (lambda* (#:key outputs #:allow-other-keys)
1646 (let ((out (assoc-ref outputs "out")))
1647 ;; The 'configure' script is a wrapper for Waf and
1648 ;; doesn't recognize things like '--enable-fast-install'.
1649 (invoke "./configure"
1650 (string-append "--prefix=" out))))))))
1651 (native-inputs
1652 `(;; TODO: Build the documentation.
1653 ;; ("docbook-xsl" ,docbook-xsl)
1654 ;; ("libxml2" ,libxml2)
1655 ;; ("libxslt" ,libxslt)
1656 ("python" ,python) ;for the Waf build system
1657 ("which" ,which)))
1658 (home-page "https://tdb.samba.org/")
1659 (synopsis "Trivial database")
1660 (description
1661 "TDB is a Trivial Database. In concept, it is very much like GDBM,
1662 and BSD's DB except that it allows multiple simultaneous writers and uses
1663 locking internally to keep writers from trampling on each other. TDB is also
1664 extremely small.")
1665 (license license:lgpl3+)))
1666
1667 (define-public perl-dbi
1668 (package
1669 (name "perl-dbi")
1670 (version "1.643")
1671 (source (origin
1672 (method url-fetch)
1673 (uri (string-append
1674 "mirror://cpan/authors/id/T/TI/TIMB/DBI-"
1675 version ".tar.gz"))
1676 (sha256
1677 (base32
1678 "1yinx39960y241vf2sknxj0dfz82a5m9gvklq5rw78k0nlyrjawa"))))
1679 (build-system perl-build-system)
1680 (synopsis "Database independent interface for Perl")
1681 (description "This package provides an database interface for Perl.")
1682 (home-page "https://metacpan.org/release/DBI")
1683 (license license:perl-license)))
1684
1685 (define-public perl-dbix-class
1686 (package
1687 (name "perl-dbix-class")
1688 (version "0.082842")
1689 (source
1690 (origin
1691 (method url-fetch)
1692 (uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
1693 "DBIx-Class-" version ".tar.gz"))
1694 (sha256
1695 (base32 "1rh7idjjbibc1zmiaaarask434lh0lx7f2xyfwmy37k9fa0xcpmh"))))
1696 (build-system perl-build-system)
1697 (native-inputs
1698 `(("perl-dbd-sqlite" ,perl-dbd-sqlite)
1699 ("perl-file-temp" ,perl-file-temp)
1700 ("perl-module-install" ,perl-module-install)
1701 ("perl-package-stash" ,perl-package-stash)
1702 ("perl-test-deep" ,perl-test-deep)
1703 ("perl-test-exception" ,perl-test-exception)
1704 ("perl-test-warn" ,perl-test-warn)))
1705 (propagated-inputs
1706 `(("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
1707 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
1708 ("perl-class-inspector" ,perl-class-inspector)
1709 ("perl-config-any" ,perl-config-any)
1710 ("perl-context-preserve" ,perl-context-preserve)
1711 ("perl-data-dumper-concise" ,perl-data-dumper-concise)
1712 ("perl-data-page" ,perl-data-page)
1713 ("perl-dbi" ,perl-dbi)
1714 ("perl-devel-globaldestruction" ,perl-devel-globaldestruction)
1715 ("perl-hash-merge" ,perl-hash-merge)
1716 ("perl-module-find" ,perl-module-find)
1717 ("perl-moo" ,perl-moo)
1718 ("perl-mro-compat" ,perl-mro-compat)
1719 ("perl-namespace-clean" ,perl-namespace-clean)
1720 ("perl-path-class" ,perl-path-class)
1721 ("perl-scalar-list-utils" ,perl-scalar-list-utils)
1722 ("perl-scope-guard" ,perl-scope-guard)
1723 ("perl-sql-abstract-classic" ,perl-sql-abstract-classic)
1724 ("perl-sub-name" ,perl-sub-name)
1725 ("perl-text-balanced" ,perl-text-balanced)
1726 ("perl-try-tiny" ,perl-try-tiny)))
1727 (home-page "https://metacpan.org/release/DBIx-Class")
1728 (synopsis "Extensible and flexible object <-> relational mapper")
1729 (description "An SQL to OO mapper with an object API inspired by
1730 Class::DBI (with a compatibility layer as a springboard for porting) and a
1731 resultset API that allows abstract encapsulation of database operations. It
1732 aims to make representing queries in your code as perl-ish as possible while
1733 still providing access to as many of the capabilities of the database as
1734 possible, including retrieving related records from multiple tables in a
1735 single query, \"JOIN\", \"LEFT JOIN\", \"COUNT\", \"DISTINCT\", \"GROUP BY\",
1736 \"ORDER BY\" and \"HAVING\" support.")
1737 (license license:perl-license)))
1738
1739 (define-public perl-dbix-class-cursor-cached
1740 (package
1741 (name "perl-dbix-class-cursor-cached")
1742 (version "1.001004")
1743 (source
1744 (origin
1745 (method url-fetch)
1746 (uri (string-append "mirror://cpan/authors/id/A/AR/ARCANEZ/"
1747 "DBIx-Class-Cursor-Cached-" version ".tar.gz"))
1748 (sha256
1749 (base32
1750 "09b2jahn2x12qm4f7qm1jzsxbz7qn1czp6a3fnl5l2i3l4r5421p"))))
1751 (build-system perl-build-system)
1752 (native-inputs
1753 `(("perl-cache-cache" ,perl-cache-cache)
1754 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1755 ("perl-module-install" ,perl-module-install)))
1756 (propagated-inputs
1757 `(("perl-carp-clan" ,perl-carp-clan)
1758 ("perl-dbix-class" ,perl-dbix-class)))
1759 (home-page "https://metacpan.org/release/DBIx-Class-Cursor-Cached")
1760 (synopsis "Cursor with built-in caching support")
1761 (description "DBIx::Class::Cursor::Cached provides a cursor class with
1762 built-in caching support.")
1763 (license license:perl-license)))
1764
1765 (define-public perl-dbix-class-introspectablem2m
1766 (package
1767 (name "perl-dbix-class-introspectablem2m")
1768 (version "0.001002")
1769 (source
1770 (origin
1771 (method url-fetch)
1772 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
1773 "DBIx-Class-IntrospectableM2M-" version ".tar.gz"))
1774 (sha256
1775 (base32
1776 "1w47rh2241iy5x3a9bqsyd5kdp9sk43dksr99frzv4qn4jsazfn6"))))
1777 (build-system perl-build-system)
1778 (native-inputs
1779 `(("perl-module-install" ,perl-module-install)))
1780 (propagated-inputs
1781 `(("perl-dbix-class" ,perl-dbix-class)))
1782 (home-page "https://metacpan.org/release/DBIx-Class-IntrospectableM2M")
1783 (synopsis "Introspect many-to-many relationships")
1784 (description "Because the many-to-many relationships are not real
1785 relationships, they can not be introspected with DBIx::Class. Many-to-many
1786 relationships are actually just a collection of convenience methods installed
1787 to bridge two relationships. This DBIx::Class component can be used to store
1788 all relevant information about these non-relationships so they can later be
1789 introspected and examined.")
1790 (license license:perl-license)))
1791
1792 (define-public perl-dbix-class-schema-loader
1793 (package
1794 (name "perl-dbix-class-schema-loader")
1795 (version "0.07049")
1796 (source
1797 (origin
1798 (method url-fetch)
1799 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
1800 "DBIx-Class-Schema-Loader-" version ".tar.gz"))
1801 (sha256
1802 (base32
1803 "0r57fv71ypxafb85cpxph1hdqii7ipjwvc19yb6fpkvq2ggcssg8"))))
1804 (build-system perl-build-system)
1805 (native-inputs
1806 `(("perl-config-any" ,perl-config-any)
1807 ("perl-config-general" ,perl-config-general)
1808 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1809 ("perl-dbix-class-introspectablem2m" ,perl-dbix-class-introspectablem2m)
1810 ("perl-module-install" ,perl-module-install)
1811 ("perl-moose" ,perl-moose)
1812 ("perl-moosex-markasmethods" ,perl-moosex-markasmethods)
1813 ("perl-moosex-nonmoose" ,perl-moosex-nonmoose)
1814 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
1815 ("perl-test-deep" ,perl-test-deep)
1816 ("perl-test-differences" ,perl-test-differences)
1817 ("perl-test-exception" ,perl-test-exception)
1818 ("perl-test-pod" ,perl-test-pod)
1819 ("perl-test-warn" ,perl-test-warn)))
1820 (propagated-inputs
1821 `(("perl-class-unload" ,perl-class-unload)
1822 ("perl-class-inspector" ,perl-class-inspector)
1823 ("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
1824 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
1825 ("perl-carp-clan" ,perl-carp-clan)
1826 ("perl-data-dump" ,perl-data-dump)
1827 ("perl-dbix-class" ,perl-dbix-class)
1828 ("perl-hash-merge" ,perl-hash-merge)
1829 ("perl-list-moreutils" ,perl-list-moreutils)
1830 ("perl-lingua-en-inflect-phrase" ,perl-lingua-en-inflect-phrase)
1831 ("perl-lingua-en-inflect-number" ,perl-lingua-en-inflect-number)
1832 ("perl-lingua-en-tagger" ,perl-lingua-en-tagger)
1833 ("perl-namespace-clean" ,perl-namespace-clean)
1834 ("perl-mro-compat" ,perl-mro-compat)
1835 ("perl-scope-guard" ,perl-scope-guard)
1836 ("perl-string-camelcase" ,perl-string-camelcase)
1837 ("perl-string-toidentifier-en" ,perl-string-toidentifier-en)
1838 ("perl-sub-name" ,perl-sub-name)
1839 ("perl-try-tiny" ,perl-try-tiny)))
1840 (arguments `(#:tests? #f)) ;TODO: t/20invocations.t fails
1841 (home-page "https://metacpan.org/release/DBIx-Class-Schema-Loader")
1842 (synopsis "Create a DBIx::Class::Schema based on a database")
1843 (description "DBIx::Class::Schema::Loader automates the definition of a
1844 DBIx::Class::Schema by scanning database table definitions and setting up the
1845 columns, primary keys, unique constraints and relationships.")
1846 (license license:perl-license)))
1847
1848 (define-public perl-dbd-pg
1849 (package
1850 (name "perl-dbd-pg")
1851 (version "3.7.4")
1852 (source
1853 (origin
1854 (method url-fetch)
1855 (uri (string-append "mirror://cpan/authors/id/T/TU/TURNSTEP/"
1856 "DBD-Pg-" version ".tar.gz"))
1857 (sha256
1858 (base32
1859 "0gkqlvbmzbdm0g4k328nlkjdg3wrjm5i2n9jxj1i8sqxkm79rylz"))))
1860 (build-system perl-build-system)
1861 (native-inputs
1862 `(("perl-dbi" ,perl-dbi)))
1863 (propagated-inputs
1864 `(("perl-dbi" ,perl-dbi)
1865 ("postgresql" ,postgresql)))
1866 (home-page "https://metacpan.org/release/DBD-Pg")
1867 (synopsis "DBI PostgreSQL interface")
1868 (description "This package provides a PostgreSQL driver for the Perl5
1869 @dfn{Database Interface} (DBI).")
1870 (license license:perl-license)))
1871
1872 (define-public perl-dbd-mysql
1873 (package
1874 (name "perl-dbd-mysql")
1875 (version "4.050")
1876 (source
1877 (origin
1878 (method url-fetch)
1879 (uri (string-append "mirror://cpan/authors/id/D/DV/DVEEDEN/"
1880 "DBD-mysql-" version ".tar.gz"))
1881 (sha256
1882 (base32 "0y4djb048i09dk19av7mzfb3khr72vw11p3ayw2p82jsy4gm8j2g"))))
1883 (build-system perl-build-system)
1884 (arguments
1885 `(#:phases
1886 (modify-phases %standard-phases
1887 (add-before 'configure 'skip-library-detection
1888 ;; Avoid depencies on perl-devel-checklib, openssl, and zlib. They
1889 ;; are really only needed for the test suite; their absence does not
1890 ;; affect the build or the end result.
1891 (lambda _
1892 (substitute* "Makefile.PL"
1893 (("use Devel::CheckLib;" match)
1894 (string-append "# " match))
1895 (("assert_lib")
1896 "print"))
1897 #t)))
1898 ;; Tests require running MySQL server.
1899 #:tests? #f))
1900 (propagated-inputs
1901 `(("perl-dbi" ,perl-dbi)
1902 ("mysql" ,mariadb "lib")
1903 ("mysql-dev" ,mariadb "dev")))
1904 (home-page "https://metacpan.org/release/DBD-mysql")
1905 (synopsis "DBI MySQL interface")
1906 (description "This package provides a MySQL driver for the Perl5
1907 @dfn{Database Interface} (DBI).")
1908 (license license:perl-license)))
1909
1910 (define-public perl-dbd-sqlite
1911 (package
1912 (name "perl-dbd-sqlite")
1913 (version "1.66")
1914 (source (origin
1915 (method url-fetch)
1916 (uri (string-append
1917 "mirror://cpan/authors/id/I/IS/ISHIGAKI/DBD-SQLite-"
1918 version ".tar.gz"))
1919 (sha256
1920 (base32
1921 "1zljln5nh61gj3k22a1fv2vhx5l83waizmarwkh77hk6kzzmvrw9"))))
1922 (build-system perl-build-system)
1923 (inputs `(("sqlite" ,sqlite)))
1924 (propagated-inputs `(("perl-dbi" ,perl-dbi)))
1925 (synopsis "SQlite interface for Perl")
1926 (description "DBD::SQLite is a Perl DBI driver for SQLite, that includes
1927 the entire thing in the distribution. So in order to get a fast transaction
1928 capable RDBMS working for your Perl project you simply have to install this
1929 module, and nothing else.")
1930 (license license:perl-license)
1931 (home-page "https://metacpan.org/release/DBD-SQLite")))
1932
1933 (define-public perl-mysql-config
1934 (package
1935 (name "perl-mysql-config")
1936 (version "1.04")
1937 (source
1938 (origin
1939 (method url-fetch)
1940 (uri (string-append
1941 "mirror://cpan/authors/id/D/DA/DARREN/MySQL-Config-"
1942 version
1943 ".tar.gz"))
1944 (sha256
1945 (base32
1946 "1svn7ccw2gc4cazvc58j84rxhnc9vs01zpird0l8460598j475qr"))))
1947 (build-system perl-build-system)
1948 (home-page "https://metacpan.org/release/MySQL-Config")
1949 (synopsis "Parse and utilize MySQL's /etc/my.cnf and ~/.my.cnf files")
1950 (description
1951 "@code{MySQL::Config} emulates the @code{load_defaults} function from
1952 libmysqlclient. It will fill an array with long options, ready to be parsed by
1953 @code{Getopt::Long}.")
1954 (license license:perl-license)))
1955
1956 (define-public perl-sql-abstract
1957 (package
1958 (name "perl-sql-abstract")
1959 (version "1.87")
1960 (source
1961 (origin
1962 (method url-fetch)
1963 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
1964 "SQL-Abstract-" version ".tar.gz"))
1965 (sha256
1966 (base32 "0jhw91b23wc9bkfwcgvka4x5ddxk58m9bcp5ay7a3vx77nla09p9"))))
1967 (build-system perl-build-system)
1968 (native-inputs
1969 `(("perl-module-install" ,perl-module-install)
1970 ("perl-test-deep" ,perl-test-deep)
1971 ("perl-test-exception" ,perl-test-exception)
1972 ("perl-test-warn" ,perl-test-warn)))
1973 (propagated-inputs
1974 `(("perl-hash-merge" ,perl-hash-merge)
1975 ("perl-moo" ,perl-moo)
1976 ("perl-mro-compat" ,perl-mro-compat)
1977 ("perl-text-balanced" ,perl-text-balanced)))
1978 (home-page "https://metacpan.org/release/SQL-Abstract")
1979 (synopsis "Generate SQL from Perl data structures")
1980 (description "This module was inspired by the excellent DBIx::Abstract.
1981 While based on the concepts used by DBIx::Abstract, the concepts used have
1982 been modified to make the SQL easier to generate from Perl data structures.
1983 The underlying idea is for this module to do what you mean, based on the data
1984 structures you provide it, so that you don't have to modify your code every
1985 time your data changes.")
1986 (license license:perl-license)))
1987
1988 (define-public perl-sql-abstract-classic
1989 (package
1990 (name "perl-sql-abstract-classic")
1991 (version "1.91")
1992 (source
1993 (origin
1994 (method url-fetch)
1995 (uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
1996 "SQL-Abstract-Classic-" version ".tar.gz"))
1997 (sha256
1998 (base32 "0a7g13hs3kdxrjn43sfli09mgsi9d6w0dfw6hlk268av17yisgaf"))))
1999 (build-system perl-build-system)
2000 (native-inputs
2001 `(("perl-test-deep" ,perl-test-deep)
2002 ("perl-test-exception" ,perl-test-exception)
2003 ("perl-test-warn" ,perl-test-warn)))
2004 (propagated-inputs
2005 `(("perl-mro-compat" ,perl-mro-compat)
2006 ("perl-sql-abstract" ,perl-sql-abstract)))
2007 (home-page "https://metacpan.org/release/SQL-Abstract-Classic")
2008 (synopsis "Generate SQL from Perl data structures")
2009 (description
2010 "This module is nearly identical to @code{SQL::Abstract} 1.81, and exists
2011 to preserve the ability of users to opt into the new way of doing things in
2012 later versions according to their own schedules.
2013
2014 It is an abstract SQL generation module based on the concepts used by
2015 @code{DBIx::Abstract}, with several important differences, especially when it
2016 comes to @code{WHERE} clauses. These concepts were modified to make the SQL
2017 easier to generate from Perl data structures.
2018
2019 The underlying idea is for this module to do what you mean, based on the data
2020 structures you provide it. You shouldn't have to modify your code every time
2021 your data changes, as this module figures it out.")
2022 (license license:perl-license)))
2023
2024 (define-public perl-sql-splitstatement
2025 (package
2026 (name "perl-sql-splitstatement")
2027 (version "1.00020")
2028 (source
2029 (origin
2030 (method url-fetch)
2031 (uri (string-append "mirror://cpan/authors/id/E/EM/EMAZEP/"
2032 "SQL-SplitStatement-" version ".tar.gz"))
2033 (sha256
2034 (base32
2035 "0bqg45k4c9qkb2ypynlwhpvzsl4ssfagmsalys18s5c79ps30z7p"))))
2036 (build-system perl-build-system)
2037 (native-inputs
2038 `(("perl-test-exception" ,perl-test-exception)))
2039 (propagated-inputs
2040 `(("perl-class-accessor" ,perl-class-accessor)
2041 ("perl-list-moreutils" ,perl-list-moreutils)
2042 ("perl-regexp-common" ,perl-regexp-common)
2043 ("perl-sql-tokenizer" ,perl-sql-tokenizer)))
2044 (home-page "https://metacpan.org/release/SQL-SplitStatement")
2045 (synopsis "Split SQL code into atomic statements")
2046 (description "This module tries to split any SQL code, even including
2047 non-standard extensions, into the atomic statements it is composed of.")
2048 (license license:perl-license)))
2049
2050 (define-public perl-sql-tokenizer
2051 (package
2052 (name "perl-sql-tokenizer")
2053 (version "0.24")
2054 (source
2055 (origin
2056 (method url-fetch)
2057 (uri (string-append "mirror://cpan/authors/id/I/IZ/IZUT/"
2058 "SQL-Tokenizer-" version ".tar.gz"))
2059 (sha256
2060 (base32
2061 "1qa2dfbzdlr5qqdam9yn78z5w3al5r8577x06qan8wv58ay6ka7s"))))
2062 (build-system perl-build-system)
2063 (home-page "https://metacpan.org/release/SQL-Tokenizer")
2064 (synopsis "SQL tokenizer")
2065 (description "SQL::Tokenizer is a tokenizer for SQL queries. It does not
2066 claim to be a parser or query verifier. It just creates sane tokens from a
2067 valid SQL query.")
2068 (license license:perl-license)))
2069
2070 (define-public unixodbc
2071 (package
2072 (name "unixodbc")
2073 (version "2.3.9")
2074 (source (origin
2075 (method url-fetch)
2076 (uri
2077 (string-append
2078 "ftp://ftp.unixodbc.org/pub/unixODBC/unixODBC-"
2079 version ".tar.gz"))
2080 (sha256
2081 (base32 "01xj65d02i3yjy7p9z08y9jakcs5szmz4rask868n7387nn3x0sj"))))
2082 (build-system gnu-build-system)
2083 (synopsis "Data source abstraction library")
2084 (description "Unixodbc is a library providing an API with which to access
2085 data sources. Data sources include SQL Servers and any software with an ODBC
2086 Driver.")
2087 (license license:lgpl2.1+)
2088 ;; COPYING contains copy of lgpl2.1 - but copyright notices just say "LGPL"
2089 (home-page "http://www.unixodbc.org")))
2090
2091 (define-public unqlite
2092 (package
2093 (name "unqlite")
2094 (version "1.1.6")
2095 (source (origin
2096 (method url-fetch)
2097 ;; Contains bug fixes against the official release, and has an
2098 ;; autotooled build system.
2099 (uri (string-append "https://github.com/aidin36/tocc/releases/"
2100 "download/v1.0.0/"
2101 "unqlite-unofficial-" version ".tar.gz"))
2102 (sha256
2103 (base32
2104 "1sbpvhg15gadq0mpcy16q7k3rkg4b4dicpnn5xifpkpn02sqik3s"))))
2105 (build-system gnu-build-system)
2106 (arguments `(#:tests? #f)) ;No check target
2107 (home-page "https://www.unqlite.org")
2108 (synopsis "In-memory key/value and document store")
2109 (description
2110 "UnQLite is an in-process software library which implements a
2111 self-contained, serverless, zero-configuration, transactional NoSQL
2112 database engine. UnQLite is a document store database similar to
2113 MongoDB, Redis, CouchDB, etc. as well as a standard Key/Value store
2114 similar to BerkeleyDB, LevelDB, etc.")
2115 (license license:bsd-2)))
2116
2117 (define-public redis
2118 (package
2119 (name "redis")
2120 (version "5.0.7")
2121 (source (origin
2122 (method url-fetch)
2123 (uri (string-append "http://download.redis.io/releases/redis-"
2124 version".tar.gz"))
2125 (sha256
2126 (base32
2127 "0ax8sf3vw0yadr41kzc04917scrg5wir1d94zmbz00b8pzm79nv1"))))
2128 (build-system gnu-build-system)
2129 (arguments
2130 '(#:tests? #f ; tests related to master/slave and replication fail
2131 #:phases (modify-phases %standard-phases
2132 (delete 'configure))
2133 #:make-flags `("CC=gcc"
2134 "MALLOC=libc"
2135 "LDFLAGS=-ldl"
2136 ,(string-append "PREFIX="
2137 (assoc-ref %outputs "out")))))
2138 (synopsis "Key-value cache and store")
2139 (description "Redis is an advanced key-value cache and store. Redis
2140 supports many data structures including strings, hashes, lists, sets, sorted
2141 sets, bitmaps and hyperloglogs.")
2142 (home-page "https://redis.io/")
2143 (license license:bsd-3)))
2144
2145 (define-public kyotocabinet
2146 (package
2147 (name "kyotocabinet")
2148 (version "1.2.78")
2149 (source (origin
2150 (method url-fetch)
2151 (uri (string-append "https://fallabs.com/kyotocabinet/pkg/"
2152 "kyotocabinet-" version ".tar.gz"))
2153 (sha256
2154 (base32
2155 "1bxkf9kmcavq9rqridb8mvmrk3hj4447ffi24m2admsbm61n6k29"))))
2156 (build-system gnu-build-system)
2157 (arguments
2158 `(#:configure-flags
2159 (list
2160 "--disable-opt" ;"-march=native". XXX this also turns off -O0.
2161 (string-append "LDFLAGS=-Wl,-rpath="
2162 (assoc-ref %outputs "out") "/lib"))))
2163 (inputs `(("zlib" ,zlib)))
2164 (home-page "https://fallabs.com/kyotocabinet/")
2165 (synopsis
2166 "Kyoto Cabinet is a modern implementation of the DBM database")
2167 (description
2168 "Kyoto Cabinet is a standalone file-based database that supports Hash
2169 and B+ Tree data storage models. It is a fast key-value lightweight
2170 database and supports many programming languages. It is a NoSQL database.")
2171 (license license:gpl3+)))
2172
2173 (define-public tokyocabinet
2174 (package
2175 (name "tokyocabinet")
2176 (version "1.4.48")
2177 (source
2178 (origin
2179 (method url-fetch)
2180 (uri (string-append "http://fallabs.com/tokyocabinet/"
2181 name "-" version ".tar.gz"))
2182 (sha256
2183 (base32
2184 "140zvr0n8kvsl0fbn2qn3f2kh3yynfwnizn4dgbj47m975yg80x0"))))
2185 (build-system gnu-build-system)
2186 (arguments
2187 `(#:configure-flags
2188 (list "--enable-pthread" "--enable-off64" "--enable-fastest"
2189 (string-append "LDFLAGS=-Wl,-rpath="
2190 (assoc-ref %outputs "out") "/lib"))))
2191 (inputs
2192 `(("zlib" ,zlib)))
2193 (home-page "http://fallabs.com/tokyocabinet/")
2194 (synopsis "Tokyo Cabinet is a modern implementation of the DBM database")
2195 (description
2196 "Tokyo Cabinet is a library of routines for managing a database.
2197 The database is a simple data file containing records, each is a pair of a
2198 key and a value. Every key and value is serial bytes with variable length.
2199 Both binary data and character string can be used as a key and a value.
2200 There is neither concept of data tables nor data types. Records are
2201 organized in hash table, B+ tree, or fixed-length array.")
2202 (license license:lgpl2.1+)))
2203
2204 (define-public wiredtiger
2205 (package
2206 (name "wiredtiger")
2207 (version "2.9.1")
2208 (source (origin
2209 (method url-fetch)
2210 (uri (string-append
2211 "http://source.wiredtiger.com/releases/wiredtiger-"
2212 version ".tar.bz2"))
2213 (sha256
2214 (base32
2215 "0krwnb2zfbhvjaskwl875qzd3y626s84zcciq2mxr5c5riw3yh6s"))))
2216 (build-system gnu-build-system)
2217 (arguments
2218 '(#:configure-flags '("--enable-lz4" "--with-builtins=snappy,zlib")
2219 #:phases
2220 (modify-phases %standard-phases
2221 (add-before 'check 'disable-test/fops
2222 (lambda _
2223 ;; XXX: timed out after 3600 seconds of silence
2224 (substitute* "Makefile"
2225 (("test/fops") ""))
2226 #t)))))
2227 (inputs
2228 `(("lz4" ,lz4)
2229 ("zlib" ,zlib)
2230 ("snappy" ,snappy)))
2231 (home-page "http://source.wiredtiger.com/")
2232 (synopsis "NoSQL data engine")
2233 (description
2234 "WiredTiger is an extensible platform for data management. It supports
2235 row-oriented storage (where all columns of a row are stored together),
2236 column-oriented storage (where columns are stored in groups, allowing for
2237 more efficient access and storage of column subsets) and log-structured merge
2238 trees (LSM), for sustained throughput under random insert workloads.")
2239 (license license:gpl3) ; or GPL-2
2240 ;; configure.ac: WiredTiger requires a 64-bit build.
2241 (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))))
2242
2243 (define-public wiredtiger-3
2244 (package
2245 (inherit wiredtiger)
2246 (name "wiredtiger")
2247 (version "3.1.0")
2248 (source (origin
2249 (method url-fetch)
2250 (uri (string-append "http://source.wiredtiger.com/releases/wiredtiger-"
2251 version ".tar.bz2"))
2252 (sha256
2253 (base32
2254 "014awypv579ascg4jbx4pndj2wld337m79yyzrzyr7hxrff139jx"))))))
2255
2256 (define-public guile-wiredtiger
2257 (package
2258 (name "guile-wiredtiger")
2259 (version "0.7.0")
2260 (source (origin
2261 (method git-fetch)
2262 (uri (git-reference
2263 (url "https://framagit.org/a-guile-mind/guile-wiredtiger.git")
2264 (commit "340ad4bc2ff4dcc6216a2f5c6f9172ca320ac66b")))
2265 (file-name (string-append name "-" version "-checkout"))
2266 (sha256
2267 (base32
2268 "15j36bvxxzil7qpwlmh1rffqpva3ynvrcpqhhqbj2c9208ayz595"))))
2269 (build-system gnu-build-system)
2270 (arguments
2271 '(#:parallel-tests? #f ;; tests can't be run in parallel, yet.
2272 #:configure-flags
2273 (list (string-append "--with-libwiredtiger-prefix="
2274 (assoc-ref %build-inputs "wiredtiger")))
2275 #:make-flags '("GUILE_AUTO_COMPILE=0")))
2276 (native-inputs
2277 `(("autoconf" ,autoconf)
2278 ("automake" ,automake)
2279 ("pkg-config" ,pkg-config)))
2280 (inputs
2281 `(("wiredtiger" ,wiredtiger-3)
2282 ("guile" ,guile-2.2)))
2283 (propagated-inputs
2284 `(("guile-bytestructures" ,guile-bytestructures)))
2285 (synopsis "WiredTiger bindings for GNU Guile")
2286 (description
2287 "This package provides Guile bindings to the WiredTiger ``NoSQL''
2288 database.")
2289 (home-page "https://framagit.org/a-guile-mind/guile-wiredtiger")
2290 (license license:gpl3+)))
2291
2292 (define-public perl-db-file
2293 (package
2294 (name "perl-db-file")
2295 (version "1.855")
2296 (source
2297 (origin
2298 (method url-fetch)
2299 (uri (string-append "mirror://cpan/authors/id/P/PM/PMQS/DB_File-"
2300 version ".tar.gz"))
2301 (sha256
2302 (base32 "0q599h7g4jkzks5dxf1zifx9k7l9vif26r2dlgkzxkg6bfif5zyr"))))
2303 (build-system perl-build-system)
2304 (inputs `(("bdb" ,bdb)))
2305 (native-inputs `(("perl-test-pod" ,perl-test-pod)))
2306 (arguments
2307 `(#:phases (modify-phases %standard-phases
2308 (add-before
2309 'configure 'modify-config.in
2310 (lambda* (#:key inputs #:allow-other-keys)
2311 (substitute* "config.in"
2312 (("/usr/local/BerkeleyDB") (assoc-ref inputs "bdb")))
2313 #t)))))
2314 (home-page "https://metacpan.org/release/DB_File")
2315 (synopsis "Perl5 access to Berkeley DB version 1.x")
2316 (description
2317 "The DB::File module provides Perl bindings to the Berkeley DB version 1.x.")
2318 (license license:perl-license)))
2319
2320 (define-public lmdb
2321 (package
2322 (name "lmdb")
2323 (version "0.9.26")
2324 (source
2325 (origin
2326 (method git-fetch)
2327 (uri (git-reference
2328 (url "https://git.openldap.org/openldap/openldap.git")
2329 (commit (string-append "LMDB_" version))))
2330 (file-name (git-file-name name version))
2331 (sha256
2332 (base32 "0323xwb2rqyrr9vr6gbxc2kl89drhqw0ifmyh9pg9qgqmymyhxdx"))))
2333 (build-system gnu-build-system)
2334 (arguments
2335 `(#:test-target "test"
2336 #:phases
2337 (modify-phases %standard-phases
2338 (replace 'configure
2339 (lambda* (#:key outputs #:allow-other-keys)
2340 (chdir "libraries/liblmdb")
2341 (substitute* "Makefile"
2342 (("/usr/local") (assoc-ref outputs "out")))
2343 #t)))))
2344 (home-page "https://symas.com/lmdb/")
2345 (synopsis "Lightning Memory-Mapped Database library")
2346 (description
2347 "The @dfn{Lightning Memory-Mapped Database} (LMDB) is a high-performance
2348 transactional database. Unlike more complex relational databases, LMDB handles
2349 only key-value pairs (stored as arbitrary byte arrays) and relies on the
2350 underlying operating system for caching and locking, keeping the code small and
2351 simple.
2352 The use of ‘zero-copy’ memory-mapped files combines the persistence of classic
2353 disk-based databases with high read performance that scales linearly over
2354 multiple cores. The size of each database is limited only by the size of the
2355 virtual address space — not physical RAM.")
2356 (license license:openldap2.8)))
2357
2358 (define-public lmdbxx
2359 (package
2360 (name "lmdbxx")
2361 (version "0.9.14.0")
2362 (source
2363 (origin
2364 (method git-fetch)
2365 (uri (git-reference
2366 (url "https://github.com/drycpp/lmdbxx")
2367 (commit version)))
2368 (file-name (git-file-name name version))
2369 (sha256
2370 (base32 "1jmb9wg2iqag6ps3z71bh72ymbcjrb6clwlkgrqf1sy80qwvlsn6"))))
2371 (arguments
2372 `(#:make-flags
2373 (list (string-append "PREFIX=" (assoc-ref %outputs "out")))
2374 #:phases
2375 (modify-phases %standard-phases
2376 (delete 'configure))))
2377 (build-system gnu-build-system)
2378 (inputs `(("lmdb" ,lmdb)))
2379 (home-page "http://lmdbxx.sourceforge.net")
2380 (synopsis "C++11 wrapper for the LMDB embedded B+ tree database library")
2381 (description "@code{lmdbxx} is a comprehensive @code{C++} wrapper for the
2382 @code{LMDB} embedded database library, offering both an error-checked
2383 procedural interface and an object-oriented resource interface with RAII
2384 semantics.")
2385 (license license:unlicense)))
2386
2387 (define-public libpqxx
2388 (package
2389 (name "libpqxx")
2390 (version "4.0.1")
2391 (source (origin
2392 (method url-fetch)
2393 (uri (string-append
2394 "http://pqxx.org/download/software/libpqxx/"
2395 name "-" version ".tar.gz"))
2396 (sha256
2397 (base32
2398 "0f6wxspp6rx12fkasanb0z2g2gc8dhcfwnxagx8wwqbpg6ifsz09"))))
2399 (build-system gnu-build-system)
2400 (native-inputs
2401 `(("python" ,python-2)))
2402 (inputs `(("postgresql" ,postgresql)))
2403 (arguments
2404 `(#:tests? #f ; # FAIL: 1
2405 #:phases
2406 (modify-phases %standard-phases
2407 (add-before 'configure 'fix-sed-command
2408 (lambda _
2409 ;; Newer sed versions error out if double brackets are not used.
2410 (substitute* "configure"
2411 (("\\[:space:\\]") "[[:space:]]"))
2412 #t)))))
2413 (synopsis "C++ connector for PostgreSQL")
2414 (description
2415 "Libpqxx is a C++ library to enable user programs to communicate with the
2416 PostgreSQL database back-end. The database back-end can be local or it may be
2417 on another machine, accessed via TCP/IP.")
2418 (home-page "http://pqxx.org/")
2419 (license license:bsd-3)))
2420
2421 (define-public python-peewee
2422 (package
2423 (name "python-peewee")
2424 (version "3.13.3")
2425 (source
2426 (origin
2427 (method url-fetch)
2428 (uri (pypi-uri "peewee" version))
2429 (sha256
2430 (base32
2431 "0sc376v6rxga4b7ic9kxw2pmf28rmcx016320pa2nlb5d1rsjs8j"))))
2432 (build-system python-build-system)
2433 (arguments
2434 `(#:tests? #f)) ; Fails to import test data
2435 (inputs
2436 `(("sqlite" ,sqlite)))
2437 (native-inputs
2438 `(("python-cython" ,python-cython)))
2439 (home-page "https://github.com/coleifer/peewee/")
2440 (synopsis "Small object-relational mapping utility")
2441 (description
2442 "Peewee is a simple and small ORM (object-relation mapping) tool. Peewee
2443 handles converting between pythonic values and those used by databases, so you
2444 can use Python types in your code without having to worry. It has built-in
2445 support for sqlite, mysql and postgresql. If you already have a database, you
2446 can autogenerate peewee models using @code{pwiz}, a model generator.")
2447 (license license:expat)))
2448
2449 (define-public python2-peewee
2450 (package-with-python2 python-peewee))
2451
2452 (define-public python-tortoise-orm
2453 (package
2454 (name "python-tortoise-orm")
2455 (version "0.16.7")
2456 (source
2457 (origin
2458 (method url-fetch)
2459 (uri (pypi-uri "tortoise-orm" version))
2460 (sha256
2461 (base32
2462 "0wr7p4v0b16ypm9fcpwpl99kf491m6w3jkd13xcsgq13fy73fbqc"))))
2463 (build-system python-build-system)
2464 ;; Disable tests for now. They pull in a lot of dependencies.
2465 (arguments `(#:tests? #f))
2466 (native-inputs
2467 `(("python-asynctest" ,python-asynctest)
2468 ("python-nose2" ,python-nose2)))
2469 (propagated-inputs
2470 `(("python-aiosqlite" ,python-aiosqlite)
2471 ("python-pypika" ,python-pypika)
2472 ("python-ciso8601" ,python-ciso8601)
2473 ("python-typing-extensions"
2474 ,python-typing-extensions)))
2475 (home-page
2476 "https://github.com/tortoise/tortoise-orm")
2477 (synopsis
2478 "Easy async ORM for python, built with relations in mind")
2479 (description
2480 "Tortoise ORM is an easy-to-use asyncio ORM (Object Relational Mapper)
2481 inspired by Django. Tortoise ORM was build with relations in mind and
2482 admiration for the excellent and popular Django ORM. It’s engraved in its
2483 design that you are working not with just tables, you work with relational
2484 data.")
2485 (license license:asl2.0)))
2486
2487 (define-public sqlcipher
2488 (package
2489 (name "sqlcipher")
2490 (version "3.4.2")
2491 (source
2492 (origin
2493 (method url-fetch)
2494 (uri (string-append "https://github.com/sqlcipher/" name
2495 "/archive/v" version ".tar.gz"))
2496 (sha256
2497 (base32 "1nxarwbci8jx99f1d0y1ivxcv25s78l1p7q6qy28lkpkcx8pm2b9"))
2498 (file-name (string-append name "-" version ".tar.gz"))))
2499 (build-system gnu-build-system)
2500 (inputs
2501 `(("libcrypto" ,openssl)
2502 ("libtcl8.6" ,tcl))) ; required for running the tests
2503 (native-inputs
2504 `(("tcl" ,tcl)))
2505 (arguments
2506 '(#:configure-flags
2507 '("--enable-tempstore=yes"
2508 "CFLAGS=-DSQLITE_HAS_CODEC -DSQLITE_ENABLE_FTS3"
2509 "LDFLAGS=-lcrypto -ltcl8.6"
2510 "--disable-tcl")
2511 ;; tests cannot be run from the Makefile
2512 ;; see: <https://github.com/sqlcipher/sqlcipher/issues/172>
2513 #:test-target "testfixture"
2514 #:phases
2515 (modify-phases %standard-phases
2516 (add-before 'check 'build-test-runner
2517 (assoc-ref %standard-phases 'check))
2518 (replace 'check
2519 (lambda _
2520 (invoke "./testfixture" "test/crypto.test"))))))
2521 (home-page "https://www.zetetic.net/sqlcipher/")
2522 (synopsis
2523 "Library providing transparent encryption of SQLite database files")
2524 (description "SQLCipher is an implementation of SQLite, extended to
2525 provide transparent 256-bit AES encryption of database files. Pages are
2526 encrypted before being written to disk and are decrypted when read back. It’s
2527 well suited for protecting embedded application databases and for mobile
2528 development.")
2529 ;; The source files
2530 ;; src/{crypto.c,crypto_impl.c,crypto.h,crypto_cc.c,crypto_libtomcrypt.c},
2531 ;; src/{crypto_openssl.c,sqlcipher.h}, tool/crypto-speedtest.tcl,
2532 ;; test/crypto.test are licensed under a 3-clause BSD license. All other
2533 ;; source files are in the public domain.
2534 (license (list license:public-domain license:bsd-3))))
2535
2536 (define-public python-pyodbc-c
2537 (package
2538 (name "python-pyodbc-c")
2539 (version "3.1.4")
2540 (source
2541 (origin
2542 (method url-fetch)
2543 (uri (string-append "https://gitlab.com/daym/pyodbc-c/repository/"
2544 "archive.tar.gz?ref=v" version))
2545 (sha256
2546 (base32
2547 "05aq2297k779xidmxcwkrrxjvj1bh2q7d9a1rcjv6zr15y764ga9"))
2548 (file-name (string-append name "-" version ".tar.gz"))))
2549 (build-system python-build-system)
2550 (inputs
2551 `(("unixodbc" ,unixodbc)))
2552 (arguments
2553 `(;; No unit tests exist.
2554 #:tests? #f))
2555 (home-page "https://github.com/mkleehammer/pyodbc")
2556 (synopsis "Python ODBC Library")
2557 (description "@code{python-pyodbc-c} provides a Python DB-API driver
2558 for ODBC.")
2559 (license (license:x11-style "file://LICENSE.TXT"))))
2560
2561 (define-public python2-pyodbc-c
2562 (package-with-python2 python-pyodbc-c))
2563
2564 (define-public python-pyodbc
2565 (package
2566 (name "python-pyodbc")
2567 (version "4.0.30")
2568 (source
2569 (origin
2570 (method url-fetch)
2571 (uri (pypi-uri "pyodbc" version))
2572 (sha256
2573 (base32 "0skjpraar6hcwsy82612bpj8nw016ncyvvq88j5syrikxgp5saw5"))
2574 (file-name (string-append name "-" version ".tar.gz"))))
2575 (build-system python-build-system)
2576 (inputs
2577 `(("unixodbc" ,unixodbc)))
2578 (arguments
2579 `(#:tests? #f)) ; no unit tests exist
2580 (home-page "https://github.com/mkleehammer/pyodbc")
2581 (synopsis "Python ODBC Library")
2582 (description "@code{python-pyodbc} provides a Python DB-API driver
2583 for ODBC.")
2584 (license (license:x11-style "file:///LICENSE.TXT"))))
2585
2586 (define-public python2-pyodbc
2587 (package-with-python2 python-pyodbc))
2588
2589 (define-public mdbtools
2590 (package
2591 (name "mdbtools")
2592 (version "0.7.1")
2593 (source
2594 (origin
2595 (method git-fetch)
2596 (uri (git-reference
2597 (url "https://github.com/brianb/mdbtools")
2598 (commit version)))
2599 (file-name (git-file-name name version))
2600 (sha256
2601 (base32
2602 "0gwcpp9y09xhs21g7my2fs8ncb8i6ahlyixcx8jd3q97jbzj441l"))))
2603 (build-system gnu-build-system)
2604 (inputs
2605 `(("glib" ,glib)))
2606 (native-inputs
2607 `(("autoconf" ,autoconf)
2608 ("automake" ,automake)
2609 ("libtool" ,libtool)
2610 ("pkg-config" ,pkg-config)
2611 ("txt2man" ,txt2man)
2612 ("which" ,which)))
2613 (home-page "http://mdbtools.sourceforge.net/")
2614 (synopsis "Read Microsoft Access databases")
2615 (description "MDB Tools is a set of tools and applications to read the
2616 proprietary MDB file format used in Microsoft's Access database package. This
2617 includes programs to export schema and data from Microsoft's Access database
2618 file format to other databases such as MySQL, Oracle, Sybase, PostgreSQL,
2619 etc., and an SQL engine for performing simple SQL queries.")
2620 (license (list license:lgpl2.0
2621 license:gpl2+))))
2622
2623 (define-public python-lmdb
2624 (package
2625 (name "python-lmdb")
2626 (version "1.0.0")
2627 (source (origin
2628 (method url-fetch)
2629 (uri (pypi-uri "lmdb" version))
2630 (sha256
2631 (base32
2632 "1di1gj2agbxwqqwrpk4w58dpfah0kl10ha20s63dlqdd1bgzydj1"))
2633 (modules '((guix build utils)))
2634 (snippet
2635 ;; Delete bundled lmdb source files.
2636 '(begin
2637 (for-each delete-file (list "lib/lmdb.h"
2638 "lib/mdb.c"
2639 "lib/midl.c"
2640 "lib/midl.h"))
2641 #t))))
2642 (build-system python-build-system)
2643 (inputs
2644 `(("lmdb" ,lmdb)))
2645 (arguments
2646 `(#:phases
2647 (modify-phases %standard-phases
2648 (add-before 'build 'use-system-lmdb
2649 (lambda* (#:key inputs #:allow-other-keys)
2650 (let ((lmdb (assoc-ref inputs "lmdb")))
2651 (setenv "LMDB_PURE" "set") ; don't apply env-copy-txn.patch
2652 (setenv "LMDB_FORCE_SYSTEM" "set")
2653 (setenv "LMDB_INCLUDEDIR" (string-append lmdb "/include"))
2654 (setenv "LMDB_LIBDIR" (string-append lmdb "/lib"))
2655 #t))))
2656 ;; Tests fail with: ‘lmdb.tool: Please specify environment (--env)’.
2657 #:tests? #f))
2658 (home-page "https://github.com/dw/py-lmdb")
2659 (synopsis "Python binding for the ‘Lightning’ database (LMDB)")
2660 (description
2661 "python-lmdb or py-lmdb is a Python binding for the @dfn{Lightning
2662 Memory-Mapped Database} (LMDB), a high-performance key-value store.")
2663 (license
2664 (list license:openldap2.8
2665 ;; ‘lib/win32/inttypes.h’ and ‘lib/win32-stdint/stdint.h’ are BSD-3,
2666 ;; but not actually needed on platforms currently supported by Guix.
2667 license:bsd-3))))
2668
2669 (define-public python-orator
2670 (package
2671 (name "python-orator")
2672 (version "0.9.9")
2673 (source (origin
2674 (method url-fetch)
2675 (uri (pypi-uri "orator" version))
2676 (sha256
2677 (base32
2678 "0mbgybz63ryhr9p1f4glnls5c57jp6il3dw0kf97f3pj80687rvg"))))
2679 (build-system python-build-system)
2680 ;; FIXME: Tests are not distributed with PyPI, and the repository
2681 ;; does not contain setup.py. How to test?
2682 (arguments '(#:tests? #f))
2683 (propagated-inputs
2684 `(("python-backpack" ,python-backpack)
2685 ("python-blinker" ,python-blinker)
2686 ("python-cleo" ,python-cleo)
2687 ("python-faker" ,python-faker)
2688 ("python-inflection" ,python-inflection)
2689 ("python-lazy-object-proxy" ,python-lazy-object-proxy)
2690 ("python-pendulum" ,python-pendulum)
2691 ("python-pyaml" ,python-pyaml)
2692 ("python-pygments" ,python-pygments)
2693 ("python-pyyaml" ,python-pyyaml)
2694 ("python-simplejson" ,python-simplejson)
2695 ("python-six" ,python-six)
2696 ("python-wrapt" ,python-wrapt)))
2697 (home-page "https://orator-orm.com/")
2698 (synopsis "ActiveRecord ORM for Python")
2699 (description
2700 "Orator provides a simple ActiveRecord-like Object Relational Mapping
2701 implementation for Python.")
2702 (license license:expat)
2703 (properties `((python2-variant . ,(delay python2-orator))))))
2704
2705 (define-public python2-orator
2706 (package-with-python2 (strip-python2-variant python-orator)))
2707
2708 (define-public virtuoso-ose
2709 (package
2710 (name "virtuoso-ose")
2711 (version "7.2.5")
2712 (source
2713 (origin
2714 (method url-fetch)
2715 (uri (string-append
2716 "https://github.com/openlink/virtuoso-opensource/releases/"
2717 "download/v" version "/virtuoso-opensource-" version ".tar.gz"))
2718 (sha256
2719 (base32 "0r1xakclkfi69pzh8z2k16z3x0m49pxp764icj0ad4w4bb97fr42"))))
2720 (build-system gnu-build-system)
2721 (arguments
2722 `(#:tests? #f ; Tests require a network connection.
2723 ;; TODO: Removing the libsrc/zlib source directory breaks the build.
2724 ;; This indicates that the internal zlib code may still be used.
2725 #:configure-flags '("--without-internal-zlib"
2726 "--with-readline"
2727 "--enable-static=no")
2728 #:phases
2729 (modify-phases %standard-phases
2730 ;; Even with "--enable-static=no", "libvirtuoso-t.a" is left in
2731 ;; the build output. The following phase removes it.
2732 (add-after 'install 'remove-static-libs
2733 (lambda* (#:key outputs #:allow-other-keys)
2734 (let ((lib (string-append (assoc-ref outputs "out") "/lib")))
2735 (for-each (lambda (file)
2736 (delete-file (string-append lib "/" file)))
2737 '("libvirtuoso-t.a"
2738 "libvirtuoso-t.la"))))))))
2739 (inputs
2740 `(("openssl" ,openssl-1.0)
2741 ("net-tools" ,net-tools)
2742 ("readline" ,readline)
2743 ("zlib" ,zlib)))
2744 (home-page "http://vos.openlinksw.com/owiki/wiki/VOS/")
2745 (synopsis "Multi-model database system")
2746 (description "Virtuoso is a scalable cross-platform server that combines
2747 relational, graph, and document data management with web application server
2748 and web services platform functionality.")
2749 ;; configure: error: ... can only be build on 64bit platforms
2750 (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))
2751 (license license:gpl2)))
2752
2753 (define-public python-ccm
2754 (package
2755 (name "python-ccm")
2756 (version "2.1.6")
2757 (source
2758 (origin
2759 (method url-fetch)
2760 (uri (pypi-uri "ccm" version))
2761 (sha256
2762 (base32
2763 "177dfxsmk3k4cih6fh6v8d91bh4nqx7ns6pc07w7m7i3cvdx3c8n"))))
2764 (build-system python-build-system)
2765 (propagated-inputs
2766 `(("python-pyyaml" ,python-pyyaml)
2767 ;; Not listed in setup.py, but used in ccmlib/node.py for full
2768 ;; functionality
2769 ("python-psutil" ,python-psutil)
2770 ("python-six" ,python-six)))
2771 (home-page "https://github.com/pcmanus/ccm")
2772 (synopsis "Cassandra Cluster Manager for Apache Cassandra clusters on
2773 localhost")
2774 (description "Cassandra Cluster Manager is a development tool for testing
2775 local Cassandra clusters. It creates, launches and removes Cassandra clusters
2776 on localhost.")
2777 (license license:asl2.0)))
2778
2779 (define-public python2-ccm
2780 (package-with-python2 python-ccm))
2781
2782 (define-public python2-pysqlite
2783 (package
2784 (name "python2-pysqlite")
2785 (version "2.8.3")
2786 (source
2787 (origin
2788 (method url-fetch)
2789 (uri (pypi-uri "pysqlite" version))
2790 (sha256
2791 (base32
2792 "1424gwq9sil2ffmnizk60q36vydkv8rxs6m7xs987kz8cdc37lqp"))))
2793 (build-system python-build-system)
2794 (inputs
2795 `(("sqlite" ,sqlite)))
2796 (arguments
2797 `(#:python ,python-2 ; incompatible with Python 3
2798 #:tests? #f)) ; no test target
2799 (home-page "https://github.com/ghaering/pysqlite")
2800 (synopsis "SQLite bindings for Python")
2801 (description
2802 "Pysqlite provides SQLite bindings for Python that comply to the
2803 Database API 2.0T.")
2804 (license license:zlib)))
2805
2806 (define-public python-sqlalchemy
2807 (package
2808 (name "python-sqlalchemy")
2809 (version "1.3.20")
2810 (source
2811 (origin
2812 (method url-fetch)
2813 (uri (pypi-uri "SQLAlchemy" version))
2814 (sha256
2815 (base32 "18b9am7bsqc4nj3d2h5r93i002apczxfvpfpcqbd6f0385zmrwnj"))))
2816 (build-system python-build-system)
2817 (native-inputs
2818 `(("python-cython" ,python-cython) ; for C extensions
2819 ("python-pytest" ,python-pytest)
2820 ("python-mock" ,python-mock))) ; for tests
2821 (arguments
2822 `(#:phases
2823 (modify-phases %standard-phases
2824 (replace 'check
2825 (lambda _ (invoke "py.test"))))))
2826 (home-page "https://www.sqlalchemy.org")
2827 (synopsis "Database abstraction library")
2828 (description
2829 "SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that
2830 gives application developers the full power and flexibility of SQL. It
2831 provides a full suite of well known enterprise-level persistence patterns,
2832 designed for efficient and high-performing database access, adapted into a
2833 simple and Pythonic domain language.")
2834 (license license:x11)))
2835
2836 (define-public python2-sqlalchemy
2837 (package-with-python2 python-sqlalchemy))
2838
2839 (define-public python-sqlalchemy-utils
2840 (package
2841 (name "python-sqlalchemy-utils")
2842 (version "0.32.21")
2843 (source
2844 (origin
2845 (method url-fetch)
2846 (uri (pypi-uri "SQLAlchemy-Utils" version))
2847 (sha256
2848 (base32
2849 "1myn71dn8j74xglyh46f12sh8ywb7j0j732rzwq70kvwwnq32m73"))))
2850 (build-system python-build-system)
2851 (arguments
2852 '(#:tests? #f)) ; FIXME: Many tests require a running database server.
2853 ;; #:phases
2854 ;; (modify-phases %standard-phases
2855 ;; (replace 'check
2856 ;; (lambda _
2857 ;; (zero? (system* "py.test" "sqlalchemy_utils" "tests")))))
2858 (propagated-inputs
2859 `(("python-six" ,python-six)
2860 ("python-sqlalchemy" ,python-sqlalchemy)))
2861 (native-inputs
2862 `(("python-dateutil" ,python-dateutil)
2863 ("python-flexmock" ,python-flexmock)
2864 ("python-psycopg2" ,python-psycopg2)
2865 ("python-pytest" ,python-pytest)
2866 ("python-pytz" ,python-pytz)))
2867 (home-page "https://github.com/kvesteri/sqlalchemy-utils")
2868 (synopsis "Various utility functions for SQLAlchemy")
2869 (description
2870 "SQLAlchemy-utils provides various utility functions and custom data types
2871 for SQLAlchemy. SQLAlchemy is an SQL database abstraction library for Python.
2872
2873 You might also want to install the following optional dependencies:
2874 @enumerate
2875 @item @code{python-passlib}
2876 @item @code{python-babel}
2877 @item @code{python-cryptography}
2878 @item @code{python-pytz}
2879 @item @code{python-psycopg2}
2880 @item @code{python-furl}
2881 @item @code{python-flask-babel}
2882 @end enumerate
2883 ")
2884 (license license:bsd-3)))
2885
2886 (define-public python2-sqlalchemy-utils
2887 (package-with-python2 python-sqlalchemy-utils))
2888
2889 (define-public python-alchemy-mock
2890 (package
2891 (name "python-alchemy-mock")
2892 (version "0.4.3")
2893 (home-page "https://github.com/miki725/alchemy-mock")
2894 (source (origin
2895 (method url-fetch)
2896 (uri (pypi-uri "alchemy-mock" version))
2897 (sha256
2898 (base32
2899 "0ylxygl3bcdapzz529n8wgk7vx9gjwb3ism564ypkpd7dbsw653r"))))
2900 (build-system python-build-system)
2901 (arguments
2902 '(#:phases (modify-phases %standard-phases
2903 (replace 'check
2904 (lambda _
2905 ;; Create pytest.ini that adds doctest options to
2906 ;; prevent test failure. Taken from tox.ini.
2907 (call-with-output-file "pytest.ini"
2908 (lambda (port)
2909 (format port "[pytest]
2910 doctest_optionflags=IGNORE_EXCEPTION_DETAIL
2911 ")))
2912 (invoke "pytest" "-vv" "--doctest-modules"
2913 "alchemy_mock/"))))))
2914 (native-inputs
2915 `(("python-mock" ,python-mock)
2916 ("python-pytest" ,python-pytest)))
2917 (propagated-inputs
2918 `(("python-six" ,python-six)
2919 ("python-sqlalchemy" ,python-sqlalchemy)))
2920 (synopsis "Mock helpers for SQLAlchemy")
2921 (description
2922 "This package provides mock helpers for SQLAlchemy that makes it easy
2923 to mock an SQLAlchemy session while preserving the ability to do asserts.
2924
2925 Normally Normally SQLAlchemy's expressions cannot be easily compared as
2926 comparison on binary expression produces yet another binary expression, but
2927 this library provides functions to facilitate such comparisons.")
2928 (license license:expat)))
2929
2930 (define-public python-alembic
2931 (package
2932 (name "python-alembic")
2933 (version "1.4.3")
2934 (source
2935 (origin
2936 (method url-fetch)
2937 (uri (pypi-uri "alembic" version))
2938 (sha256
2939 (base32 "0if2dgb088clk738p26bwk50735h6jpd2kacdgc5capv2hiz6d2k"))))
2940 (build-system python-build-system)
2941 (arguments
2942 '(#:phases (modify-phases %standard-phases
2943 (replace 'check
2944 (lambda _
2945 (invoke "pytest" "-vv"))))))
2946 (native-inputs
2947 `(("python-mock" ,python-mock)
2948 ("python-pytest-cov" ,python-pytest-cov)))
2949 (propagated-inputs
2950 `(("python-dateutil" ,python-dateutil)
2951 ("python-sqlalchemy" ,python-sqlalchemy)
2952 ("python-mako" ,python-mako)
2953 ("python-editor" ,python-editor)))
2954 (home-page "https://bitbucket.org/zzzeek/alembic")
2955 (synopsis "Database migration tool for SQLAlchemy")
2956 (description
2957 "Alembic is a lightweight database migration tool for usage with the
2958 SQLAlchemy Database Toolkit for Python.")
2959 (license license:expat)))
2960
2961 (define-public python2-alembic
2962 (package-with-python2 python-alembic))
2963
2964 (define-public python-pickleshare
2965 (package
2966 (name "python-pickleshare")
2967 (version "0.7.5")
2968 (source
2969 (origin
2970 (method url-fetch)
2971 (uri (pypi-uri "pickleshare" version))
2972 (sha256
2973 (base32 "1jmghg3c53yp1i8cm6pcrm280ayi8621rwyav9fac7awjr3kss47"))))
2974 (build-system python-build-system)
2975 (arguments
2976 `(#:phases (modify-phases %standard-phases
2977 (replace 'check
2978 (lambda _
2979 (invoke "pytest"))))))
2980 (native-inputs
2981 `(("python-pytest" ,python-pytest)))
2982 (home-page "https://github.com/vivainio/pickleshare")
2983 (synopsis "Tiny key value database with concurrency support")
2984 (description
2985 "PickleShare is a small ‘shelve’-like datastore with concurrency support.
2986 Like shelve, a PickleShareDB object acts like a normal dictionary. Unlike
2987 shelve, many processes can access the database simultaneously. Changing a
2988 value in database is immediately visible to other processes accessing the same
2989 database. Concurrency is possible because the values are stored in separate
2990 files. Hence the “database” is a directory where all files are governed by
2991 PickleShare.")
2992 (properties `((python2-variant . ,(delay python2-pickleshare))))
2993 (license license:expat)))
2994
2995 (define-public python2-pickleshare
2996 (let ((pickleshare (package-with-python2
2997 (strip-python2-variant python-pickleshare))))
2998 (package (inherit pickleshare)
2999 (propagated-inputs `(("python2-pathlib2" ,python2-pathlib2)
3000 ,@(package-propagated-inputs pickleshare))))))
3001
3002 (define-public python-apsw
3003 (package
3004 (name "python-apsw")
3005 (version "3.31.1-r1")
3006 (source
3007 (origin
3008 (method url-fetch)
3009 (uri (string-append "https://github.com/rogerbinns/apsw/releases"
3010 "/download/" version "/apsw-" version ".zip"))
3011 (sha256
3012 (base32
3013 "1gap5lr6c7bp134nzvfwr693i6d0fqyaysg3ms2cayjldv616yfx"))))
3014 (build-system python-build-system)
3015 (native-inputs
3016 `(("unzip" ,unzip)))
3017 (inputs
3018 `(("sqlite" ,sqlite)))
3019 (arguments
3020 `(#:phases
3021 (modify-phases %standard-phases
3022 (replace 'build
3023 (lambda _
3024 (invoke "python" "setup.py" "build" "--enable-all-extensions")
3025 #t))
3026 (add-after 'build 'build-test-helper
3027 (lambda _
3028 (invoke "gcc" "-fPIC" "-shared" "-o" "./testextension.sqlext"
3029 "-I." "-Isqlite3" "src/testextension.c")
3030 #t))
3031 (replace 'check
3032 (lambda* (#:key inputs outputs #:allow-other-keys)
3033 (add-installed-pythonpath inputs outputs)
3034 (invoke "python" "setup.py" "test")
3035 #t)))))
3036 (home-page "https://github.com/rogerbinns/apsw/")
3037 (synopsis "Another Python SQLite Wrapper")
3038 (description "APSW is a Python wrapper for the SQLite
3039 embedded relational database engine. In contrast to other wrappers such as
3040 pysqlite it focuses on being a minimal layer over SQLite attempting just to
3041 translate the complete SQLite API into Python.")
3042 (license license:zlib)))
3043
3044 (define-public python2-apsw
3045 (package-with-python2 python-apsw))
3046
3047 (define-public python-aiosqlite
3048 (package
3049 (name "python-aiosqlite")
3050 (version "0.12.0")
3051 (source
3052 (origin
3053 (method url-fetch)
3054 (uri (pypi-uri "aiosqlite" version))
3055 (sha256
3056 (base32
3057 "1w8248yz85xyzvvh4jaxnc59fqil45aka6h82kn1rcih4rjxbnn1"))))
3058 (build-system python-build-system)
3059 (native-inputs
3060 `(("python-aiounittest" ,python-aiounittest)))
3061 (home-page "https://github.com/jreese/aiosqlite")
3062 (synopsis
3063 "Asyncio bridge for sqlite3")
3064 (description
3065 "The package aiosqlite replicates the standard sqlite3 module, but with
3066 async versions of all the standard connection and cursor methods, and context
3067 managers for automatically closing connections.")
3068 (license license:expat)))
3069
3070 (define-public python2-neo4j-driver
3071 (package
3072 (name "python2-neo4j-driver")
3073 ;; NOTE: When upgrading to 1.5.0, please add a python3 variant.
3074 (version "1.4.0")
3075 (source (origin
3076 (method url-fetch)
3077 (uri (pypi-uri "neo4j-driver" version))
3078 (sha256
3079 (base32
3080 "011r1vh182p8mm83d8dz9rfnc3l7rf7fd00cyrbyfzi71jmc4g98"))))
3081 (build-system python-build-system)
3082 (arguments
3083 `(#:python ,python-2))
3084 (home-page "https://neo4j.com/developer/python/")
3085 (synopsis "Neo4j driver code written in Python")
3086 (description "This package provides the Neo4j Python driver that connects
3087 to the database using Neo4j's binary protocol. It aims to be minimal, while
3088 being idiomatic to Python.")
3089 (license license:asl2.0)))
3090
3091 (define-public python2-py2neo
3092 (package
3093 (name "python2-py2neo")
3094 (version "3.1.2")
3095 (source (origin
3096 (method url-fetch)
3097 (uri (pypi-uri "py2neo" version))
3098 (sha256
3099 (base32
3100 "1f1q95vqcvlc3nsc33p841swnjdcjazddlq2dzi3qfnjqjrajxw1"))))
3101 (build-system python-build-system)
3102 (arguments
3103 `(#:python ,python-2))
3104 (home-page "https://py2neo.org")
3105 (synopsis "Library and toolkit for working with Neo4j in Python")
3106 (description "This package provides a client library and toolkit for
3107 working with Neo4j from within Python applications and from the command
3108 line. The core library has no external dependencies and has been carefully
3109 designed to be easy and intuitive to use.")
3110 (license license:asl2.0)))
3111
3112 (define-public python-psycopg2
3113 (package
3114 (name "python-psycopg2")
3115 (version "2.8.6")
3116 (source
3117 (origin
3118 (method url-fetch)
3119 (uri (pypi-uri "psycopg2" version))
3120 (sha256
3121 (base32 "0hzmk6b1hb5riqkljr5xics6p4zbvmis6knbczb7zhq7273zc8zv"))))
3122 (build-system python-build-system)
3123 (arguments
3124 ;; Tests would require a postgresql database "psycopg2_test"
3125 ;; and a running postgresql database management service.
3126 `(#:tests? #f)) ; TODO re-enable after providing a test-db.
3127 (inputs
3128 `(("postgresql" ,postgresql))) ; libpq
3129 (home-page "http://initd.org/psycopg/")
3130 (synopsis "Python PostgreSQL adapter")
3131 (description
3132 "psycopg2 is a thread-safe PostgreSQL adapter that implements DB-API
3133 2.0.")
3134 (license license:lgpl3+)))
3135
3136 (define-public python2-psycopg2
3137 (package-with-python2 python-psycopg2))
3138
3139 (define-public python-sadisplay
3140 (package
3141 (name "python-sadisplay")
3142 (version "0.4.8")
3143 (source
3144 (origin
3145 (method url-fetch)
3146 (uri (pypi-uri "sadisplay" version))
3147 (sha256
3148 (base32
3149 "01d9lxhmgpb68gy8rd6zj6fcwp84n2qq210n1qsk3qbsir79bzh4"))))
3150 (build-system python-build-system)
3151 (propagated-inputs
3152 `(("python-sqlalchemy" ,python-sqlalchemy)))
3153 (native-inputs
3154 ;; For tests.
3155 `(("python-nose" ,python-nose)))
3156 (home-page "https://bitbucket.org/estin/sadisplay")
3157 (synopsis "SQLAlchemy schema displayer")
3158 (description "This package provides a program to build Entity
3159 Relationship diagrams from a SQLAlchemy model (or directly from the
3160 database).")
3161 (license license:bsd-3)))
3162
3163 (define-public python2-sadisplay
3164 (package-with-python2 python-sadisplay))
3165
3166 (define-public yoyo-migrations
3167 (package
3168 (name "yoyo-migrations")
3169 (version "7.2.0")
3170 (source
3171 (origin
3172 ;; We use the upstream repository, as the tests are not included in the
3173 ;; PyPI releases.
3174 (method hg-fetch)
3175 (uri (hg-reference
3176 (url "https://hg.sr.ht/~olly/yoyo")
3177 (changeset (string-append "v" version "-release"))))
3178 (file-name (string-append name "-" version "-checkout"))
3179 (sha256
3180 (base32 "0q2z9bgdj3wyix7yvqsayfs21grp5av8ilh411lgmjhigszkvhcq"))))
3181 (build-system python-build-system)
3182 (arguments
3183 ;; XXX: Tests require a connection to some pgsql database and psycopg
3184 ;; fails to connect to it.
3185 '(#:tests? #f))
3186 (propagated-inputs
3187 `(("python-sqlparse" ,python-sqlparse)
3188 ("python-tabulate" ,python-tabulate)))
3189 (home-page "https://ollycope.com/software/yoyo/latest/")
3190 (synopsis "Database migrations with SQL")
3191 (description
3192 "Yoyo is a database schema migration tool. Migrations are written as SQL
3193 files or Python scripts that define a list of migration steps.")
3194 (license license:asl2.0)))
3195
3196 (define-public python-mysqlclient
3197 (package
3198 (name "python-mysqlclient")
3199 (version "2.0.1")
3200 (source
3201 (origin
3202 (method url-fetch)
3203 (uri (pypi-uri "mysqlclient" version))
3204 (sha256
3205 (base32
3206 "1rf5l8hazs3v18hmcrm90z3hi9wxv553ipwd5l6kj8j7l6p7abzv"))))
3207 (build-system python-build-system)
3208 (arguments '(#:tests? #f)) ;XXX: requires a live database
3209 (inputs
3210 `(("mysql-dev" ,mariadb "dev")))
3211 (home-page "https://github.com/PyMySQL/mysqlclient-python")
3212 (synopsis "MySQLdb is an interface to the popular MySQL database server for Python")
3213 (description "MySQLdb is an interface to the popular MySQL database server
3214 for Python. The design goals are:
3215 @enumerate
3216 @item Compliance with Python database API version 2.0 [PEP-0249],
3217 @item Thread-safety,
3218 @item Thread-friendliness (threads will not block each other).
3219 @end enumerate")
3220 (license license:gpl2)))
3221
3222 (define-public python-hiredis
3223 (package
3224 (name "python-hiredis")
3225 (version "0.2.0")
3226 (source
3227 (origin
3228 (method url-fetch)
3229 (uri (pypi-uri "hiredis" version))
3230 (sha256
3231 (base32
3232 "1dfm2k9l9zar9nw9fwmm74zrgraxdxs04vx9li56fjcf289qx5fa"))))
3233 (build-system python-build-system)
3234 (arguments
3235 ;; no tests
3236 `(#:tests? #f))
3237 (home-page "https://github.com/redis/hiredis-py")
3238 (synopsis "Python extension that wraps protocol parsing code in hiredis")
3239 (description "Python-hiredis is a python extension that wraps protocol
3240 parsing code in hiredis. It primarily speeds up parsing of multi bulk replies.")
3241 (license license:bsd-3)))
3242
3243 (define-public python2-hiredis
3244 (package-with-python2 python-hiredis))
3245
3246 (define-public python-fakeredis
3247 (package
3248 (name "python-fakeredis")
3249 (version "1.2.1")
3250 (source
3251 (origin
3252 (method url-fetch)
3253 (uri (pypi-uri "fakeredis" version))
3254 (sha256
3255 (base32
3256 "1s12mn4q4hz7402139khn9fx56kibj7nn0d6w81hn0zs07b90wpc"))))
3257 (build-system python-build-system)
3258 (arguments
3259 ;; no tests
3260 `(#:tests? #f))
3261 (propagated-inputs
3262 `(("python-sortedcontainers" ,python-sortedcontainers)))
3263 (home-page "https://github.com/jamesls/fakeredis")
3264 (synopsis "Fake implementation of redis API for testing purposes")
3265 (description
3266 "Fakeredis is a pure-Python implementation of the redis-py Python client
3267 that simulates talking to a redis server. It was created for a single purpose:
3268 to write unit tests.
3269
3270 Setting up redis is not hard, but one often wants to write unit tests that don't
3271 talk to an external server such as redis. This module can be used as a
3272 reasonable substitute.")
3273 (license license:bsd-3)))
3274
3275 (define-public python2-fakeredis
3276 (package-with-python2 python-fakeredis))
3277
3278 (define-public python-redis
3279 (package
3280 (name "python-redis")
3281 (version "3.5.3")
3282 (source
3283 (origin
3284 (method url-fetch)
3285 (uri (pypi-uri "redis" version))
3286 (sha256
3287 (base32 "18h5b87g15x3j6pb1h2q27ri37p2qpvc9n2wgn5yl3b6m3y0qzhf"))))
3288 (build-system python-build-system)
3289 ;; Tests require a running Redis server.
3290 (arguments '(#:tests? #f))
3291 ;; As long as we are not running test, we do not need this input :-)
3292 ;;(native-inputs
3293 ;; `(("python-pytest" ,python-pytest)))
3294 (home-page "https://github.com/andymccurdy/redis-py")
3295 (synopsis "Redis Python client")
3296 (description
3297 "This package provides a Python interface to the Redis key-value store.")
3298 (license license:expat)))
3299
3300 (define-public python2-redis
3301 (package-with-python2 python-redis))
3302
3303 (define-public python-rq
3304 (package
3305 (name "python-rq")
3306 (version "1.5.2")
3307 (source
3308 (origin
3309 (method git-fetch)
3310 (uri (git-reference
3311 (url "https://github.com/rq/rq")
3312 (commit (string-append "v" version))))
3313 (file-name (git-file-name name version))
3314 (sha256
3315 (base32 "0ikqmpq0g1qiqwd7ar1286l4hqjb6aj2wr844gihhb8ijzwhp8va"))))
3316 (build-system python-build-system)
3317 (arguments
3318 '(#:phases (modify-phases %standard-phases
3319 (add-before 'check 'start-redis
3320 (lambda _
3321 (invoke "redis-server" "--daemonize" "yes")))
3322 (replace 'check
3323 (lambda* (#:key outputs #:allow-other-keys)
3324 (let ((out (assoc-ref outputs "out")))
3325 ;; Drop test that needs the SDK for Sentry.io.
3326 (delete-file "tests/test_sentry.py")
3327 ;; Ensure 'rq' and 'rqworker' ends up on PATH.
3328 (setenv "PATH" (string-append out "/bin:"
3329 (getenv "PATH")))
3330 (invoke "pytest" "-vv")))))))
3331 (native-inputs
3332 `(("python-mock" ,python-mock)
3333 ("python-pytest" ,python-pytest)
3334 ("redis" ,redis)))
3335 (propagated-inputs
3336 `(("python-click" ,python-click)
3337 ("python-redis" ,python-redis)))
3338 (home-page "https://python-rq.org/")
3339 (synopsis "Simple job queues for Python")
3340 (description
3341 "RQ (Redis Queue) is a simple Python library for queueing jobs and
3342 processing them in the background with workers. It is backed by Redis and it
3343 is designed to have a low barrier to entry.")
3344 (license license:bsd-2)))
3345
3346 (define-public python2-rq
3347 (package-with-python2 python-rq))
3348
3349 (define-public python-rq-scheduler
3350 (package
3351 (name "python-rq-scheduler")
3352 (version "0.10.0")
3353 (home-page "https://github.com/rq/rq-scheduler")
3354 (source (origin
3355 (method git-fetch)
3356 (uri (git-reference
3357 (url home-page)
3358 (commit (string-append "v" version))))
3359 (file-name (git-file-name name version))
3360 (sha256
3361 (base32
3362 "0xg6yazqs5kbr2ayvhvljs1h5vgx5k5dds613fmhswln7gglf9hk"))))
3363 (build-system python-build-system)
3364 (arguments
3365 '(#:phases (modify-phases %standard-phases
3366 (add-before 'check 'start-redis
3367 (lambda _
3368 (invoke "redis-server" "--daemonize" "yes")))
3369 (replace 'check
3370 (lambda _
3371 (substitute* "run_tests.py"
3372 (("/usr/bin/env")
3373 (which "env")))
3374 (invoke "./run_tests.py"))))))
3375 (native-inputs
3376 `(("redis" ,redis)
3377 ("which" ,which)))
3378 (propagated-inputs
3379 `(("python-croniter" ,python-croniter)
3380 ("python-rq" ,python-rq)))
3381 (synopsis "Job scheduling capabilities for RQ (Redis Queue)")
3382 (description
3383 "This package provides job scheduling capabilities to @code{python-rq}
3384 (Redis Queue).")
3385 (license license:expat)))
3386
3387 (define-public python-trollius-redis
3388 (package
3389 (name "python-trollius-redis")
3390 (version "0.1.4")
3391 (source
3392 (origin
3393 (method url-fetch)
3394 (uri (pypi-uri "trollius_redis" version))
3395 (sha256
3396 (base32
3397 "0k3vypszmgmaipgw9xscvgm79h2zd6p6ci8gdp5sxl6g5kbqr9fy"))))
3398 (build-system python-build-system)
3399 ;; TODO: Tests require packaging 'hiredis'.
3400 (arguments '(#:tests? #f))
3401 (home-page "https://github.com/benjolitz/trollius-redis")
3402 (synopsis "Port of asyncio-redis to trollius")
3403 (description "@code{trollius-redis} is a Redis client for Python
3404 trollius. It is an asynchronous IO (PEP 3156) implementation of the
3405 Redis protocol.")
3406 (license license:bsd-2)))
3407
3408 (define-public python2-trollius-redis
3409 (package-with-python2 python-trollius-redis))
3410
3411 (define-public python-sqlparse
3412 (package
3413 (name "python-sqlparse")
3414 (version "0.3.1")
3415 (source (origin
3416 (method url-fetch)
3417 (uri (pypi-uri "sqlparse" version))
3418 (sha256
3419 (base32
3420 "0j652a6z7bdf6c77aczfn8m8b2nsr1bcqq48wzghf8vi6wvj0qp1"))))
3421 (build-system python-build-system)
3422 (arguments
3423 `(#:phases
3424 (modify-phases %standard-phases
3425 (replace 'check
3426 (lambda _ (invoke "py.test"))))))
3427 (native-inputs
3428 `(("python-pytest" ,python-pytest)))
3429 (home-page "https://github.com/andialbrecht/sqlparse")
3430 (synopsis "Non-validating SQL parser")
3431 (description "Sqlparse is a non-validating SQL parser for Python. It
3432 provides support for parsing, splitting and formatting SQL statements.")
3433 (license license:bsd-3)))
3434
3435 (define-public python2-sqlparse
3436 (package-with-python2 python-sqlparse))
3437
3438 (define-public python-sql
3439 (package
3440 (name "python-sql")
3441 (version "1.0.0")
3442 (source
3443 (origin
3444 (method url-fetch)
3445 (uri (pypi-uri "python-sql" version))
3446 (sha256
3447 (base32 "05ni936y0ia9xmryl7mlhbj9i80nnvq1bi4zxhb96rv7yvpb3fqb"))))
3448 (build-system python-build-system)
3449 (home-page "https://python-sql.tryton.org/")
3450 (synopsis "Library to write SQL queries in a pythonic way")
3451 (description "@code{python-sql} is a library to write SQL queries, that
3452 transforms idiomatic python function calls to well-formed SQL queries.")
3453 (license license:bsd-3)))
3454
3455 (define-public python2-sql
3456 (package-with-python2 python-sql))
3457
3458 (define-public python-pypika
3459 (package
3460 (name "python-pypika")
3461 (version "0.37.2")
3462 (source
3463 (origin (method git-fetch)
3464 (uri (git-reference
3465 (url "https://github.com/kayak/pypika")
3466 (commit (string-append "v" version))))
3467 (file-name (git-file-name name version))
3468 (sha256
3469 (base32
3470 "089z1c778q1fwhzsc88ws8j5gm2hgxknibabn4wpax8rz2bfs3ck"))))
3471 (build-system python-build-system)
3472 (native-inputs
3473 `(("python-parameterized" ,python-parameterized)))
3474 (home-page "https://github.com/kayak/pypika")
3475 (synopsis "SQL query builder API for Python")
3476 (description
3477 "PyPika is a python SQL query builder that exposes the full richness of
3478 the SQL language using a syntax that reflects the resulting query.")
3479 (license license:asl2.0)))
3480
3481 (define-public mongo-tools
3482 (package
3483 (name "mongo-tools")
3484 (version "3.4.0")
3485 (source
3486 (origin (method git-fetch)
3487 (uri (git-reference
3488 (url "https://github.com/mongodb/mongo-tools")
3489 (commit (string-append "r" version))))
3490 (file-name (git-file-name name version))
3491 (sha256
3492 (base32
3493 "1bcsz5cvj39a7nsxsfqmz9igrw33j6yli9kffigqyscs52amw7x1"))))
3494 (build-system go-build-system)
3495 (arguments
3496 `(#:import-path "github.com/mongodb/mongo-tools"
3497 #:modules ((srfi srfi-1)
3498 (guix build go-build-system)
3499 (guix build utils))
3500 #:install-source? #f
3501 #:phases
3502 (let ((all-tools
3503 '("bsondump" "mongodump" "mongoexport" "mongofiles"
3504 "mongoimport" "mongooplog" "mongorestore"
3505 "mongostat" "mongotop")))
3506 (modify-phases %standard-phases
3507 (add-after 'unpack 'delete-bundled-source-code
3508 (lambda _
3509 (delete-file-recursively
3510 "src/github.com/mongodb/mongo-tools/vendor")
3511 #t))
3512 (add-after 'delete-bundled-source-code 'patch-source
3513 (lambda _
3514 ;; Remove a redundant argument that causes compilation to fail.
3515 (substitute*
3516 "src/github.com/mongodb/mongo-tools/mongorestore/filepath.go"
3517 (("skipping restore of system.profile collection\", db)")
3518 "skipping restore of system.profile collection\")"))
3519 #t))
3520 (replace 'build
3521 (lambda _
3522 (for-each (lambda (tool)
3523 (let ((command
3524 `("go" "build"
3525 ;; This is where the tests expect to find the
3526 ;; executables
3527 "-o" ,(string-append
3528 "src/github.com/mongodb/mongo-tools/bin/"
3529 tool)
3530 "-v"
3531 "-tags=\"ssl sasl\""
3532 "-ldflags"
3533 "-extldflags=-Wl,-z,now,-z,relro"
3534 ,(string-append
3535 "src/github.com/mongodb/mongo-tools/"
3536 tool "/main/" tool ".go"))))
3537 (simple-format #t "build: running ~A\n"
3538 (string-join command))
3539 (apply invoke command)))
3540 all-tools)
3541 #t))
3542 (replace 'check
3543 (lambda _
3544 (with-directory-excursion "src"
3545 (for-each (lambda (tool)
3546 (invoke
3547 "go" "test" "-v"
3548 (string-append "github.com/mongodb/mongo-tools/"
3549 tool)))
3550 all-tools))
3551 #t))
3552 (replace 'install
3553 (lambda* (#:key outputs #:allow-other-keys)
3554 (for-each (lambda (tool)
3555 (install-file
3556 (string-append "src/github.com/mongodb/mongo-tools/bin/"
3557 tool)
3558 (string-append (assoc-ref outputs "out")
3559 "/bin")))
3560 all-tools)
3561 #t))))))
3562 (native-inputs
3563 `(("go-github.com-howeyc-gopass" ,go-github.com-howeyc-gopass)
3564 ("go-github.com-jessevdk-go-flags" ,go-github.com-jessevdk-go-flags)
3565 ("go-golang-org-x-crypto" ,go-golang-org-x-crypto)
3566 ("go-gopkg.in-mgo.v2" ,go-gopkg.in-mgo.v2)
3567 ("go-gopkg.in-tomb.v2" ,go-gopkg.in-tomb.v2)
3568 ("go-github.com-nsf-termbox-go" ,go-github.com-nsf-termbox-go)
3569 ("go-github.com-smartystreets-goconvey" ,go-github.com-smartystreets-goconvey)))
3570 (home-page "https://github.com/mongodb/mongo-tools")
3571 (synopsis "Various tools for interacting with MongoDB and BSON")
3572 (description
3573 "This package includes a collection of tools related to MongoDB.
3574 @table @code
3575 @item bsondump
3576 Display BSON files in a human-readable format
3577 @item mongoimport
3578 Convert data from JSON, TSV or CSV and insert them into a collection
3579 @item mongoexport
3580 Write an existing collection to CSV or JSON format
3581 @item mongodump/mongorestore
3582 Dump MongoDB backups to disk in the BSON format
3583 @item mongorestore
3584 Read MongoDB backups in the BSON format, and restore them to a live database
3585 @item mongostat
3586 Monitor live MongoDB servers, replica sets, or sharded clusters
3587 @item mongofiles
3588 Read, write, delete, or update files in GridFS
3589 @item mongooplog
3590 Replay oplog entries between MongoDB servers
3591 @item mongotop
3592 Monitor read/write activity on a mongo server
3593 @end table")
3594 (license license:asl2.0)))
3595
3596 ;; There are many wrappers for this in other languages. When touching, please
3597 ;; be sure to ensure all dependencies continue to build.
3598 (define-public apache-arrow
3599 (package
3600 (name "apache-arrow")
3601 (version "0.17.1")
3602 (source
3603 (origin
3604 (method git-fetch)
3605 (uri (git-reference
3606 (url "https://github.com/apache/arrow")
3607 (commit (string-append "apache-arrow-" version))))
3608 (file-name (git-file-name name version))
3609 (sha256
3610 (base32
3611 "02r6yx3yhywzikd3b0vfkjgddhfiriyx2vpm3jf5880wq59x798a"))))
3612 (build-system cmake-build-system)
3613 (arguments
3614 `(#:tests? #f
3615 #:phases
3616 (modify-phases %standard-phases
3617 (add-before 'configure 'enter-source-directory
3618 (lambda _ (chdir "cpp") #t))
3619 (add-after 'unpack 'set-env
3620 (lambda _
3621 (setenv "BOOST_ROOT" (assoc-ref %build-inputs "boost"))
3622 (setenv "BROTLI_HOME" (assoc-ref %build-inputs "brotli"))
3623 (setenv "FLATBUFFERS_HOME" (assoc-ref %build-inputs "flatbuffers"))
3624 (setenv "RAPIDJSON_HOME" (assoc-ref %build-inputs "rapidjson"))
3625 #t)))
3626 #:build-type "Release"
3627 #:configure-flags
3628 (list "-DARROW_PYTHON=ON"
3629 "-DARROW_GLOG=ON"
3630 ;; Parquet options
3631 "-DARROW_PARQUET=ON"
3632 "-DPARQUET_BUILD_EXECUTABLES=ON"
3633 ;; The maintainers disallow using system versions of
3634 ;; jemalloc:
3635 ;; https://issues.apache.org/jira/browse/ARROW-3507. This
3636 ;; is unfortunate because jemalloc increases performance:
3637 ;; https://arrow.apache.org/blog/2018/07/20/jemalloc/.
3638 "-DARROW_JEMALLOC=OFF"
3639
3640 ;; The CMake option ARROW_DEPENDENCY_SOURCE is a global
3641 ;; option that instructs the build system how to resolve
3642 ;; each dependency. SYSTEM = Finding the dependency in
3643 ;; system paths using CMake's built-in find_package
3644 ;; function, or using pkg-config for packages that do not
3645 ;; have this feature
3646 "-DARROW_DEPENDENCY_SOURCE=SYSTEM"
3647
3648 ;; Split output into its component packages.
3649 (string-append "-DCMAKE_INSTALL_PREFIX="
3650 (assoc-ref %outputs "lib"))
3651 (string-append "-DCMAKE_INSTALL_RPATH="
3652 (assoc-ref %outputs "lib")
3653 "/lib")
3654 (string-append "-DCMAKE_INSTALL_BINDIR="
3655 (assoc-ref %outputs "out")
3656 "/bin")
3657 (string-append "-DCMAKE_INSTALL_INCLUDEDIR="
3658 (assoc-ref %outputs "include")
3659 "/share/include")
3660
3661
3662 "-DARROW_WITH_SNAPPY=ON"
3663 "-DARROW_WITH_ZLIB=ON"
3664 "-DARROW_WITH_ZSTD=ON"
3665 "-DARROW_WITH_LZ4=ON"
3666 "-DARROW_COMPUTE=ON"
3667 "-DARROW_CSV=ON"
3668 "-DARROW_DATASET=ON"
3669 "-DARROW_FILESYSTEM=ON"
3670 "-DARROW_HDFS=ON"
3671 "-DARROW_JSON=ON"
3672 ;; Arrow Python C++ integration library (required for
3673 ;; building pyarrow). This library must be built against
3674 ;; the same Python version for which you are building
3675 ;; pyarrow. NumPy must also be installed. Enabling this
3676 ;; option also enables ARROW_COMPUTE, ARROW_CSV,
3677 ;; ARROW_DATASET, ARROW_FILESYSTEM, ARROW_HDFS, and
3678 ;; ARROW_JSON.
3679 "-DARROW_PYTHON=ON"
3680
3681 ;; Building the tests forces on all the
3682 ;; optional features and the use of static
3683 ;; libraries.
3684 "-DARROW_BUILD_TESTS=OFF"
3685 "-DBENCHMARK_ENABLE_GTEST_TESTS=OFF"
3686 ;;"-DBENCHMARK_ENABLE_TESTING=OFF"
3687 "-DARROW_BUILD_STATIC=OFF")))
3688 (inputs
3689 `(("boost" ,boost)
3690 ("brotli" ,google-brotli)
3691 ("double-conversion" ,double-conversion)
3692 ("snappy" ,snappy)
3693 ("gflags" ,gflags)
3694 ("glog" ,glog)
3695 ("apache-thrift" ,apache-thrift "lib")
3696 ("protobuf" ,protobuf)
3697 ("rapidjson" ,rapidjson)
3698 ("zlib" ,zlib)
3699 ("bzip2" ,bzip2)
3700 ("lz4" ,lz4)
3701 ("zstd" ,zstd "lib")
3702 ("re2" ,re2)
3703 ("grpc" ,grpc)
3704 ("python-3" ,python)
3705 ("python-numpy" ,python-numpy)))
3706 (native-inputs
3707 `(("pkg-config" ,pkg-config)))
3708 (outputs '("out" "lib" "include"))
3709 (home-page "https://arrow.apache.org/")
3710 (synopsis "Columnar in-memory analytics")
3711 (description "Apache Arrow is a columnar in-memory analytics layer
3712 designed to accelerate big data. It houses a set of canonical in-memory
3713 representations of flat and hierarchical data along with multiple
3714 language-bindings for structure manipulation. It also provides IPC and common
3715 algorithm implementations.")
3716 (license license:asl2.0)))
3717
3718 (define-public python-pyarrow
3719 (package
3720 (inherit apache-arrow)
3721 (name "python-pyarrow")
3722 (build-system python-build-system)
3723 (arguments
3724 '(#:tests? #f ; XXX There are no tests in the "python" directory
3725 #:phases
3726 (modify-phases %standard-phases
3727 (delete 'build) ; XXX the build is performed again during the install phase
3728 (add-after 'unpack 'enter-source-directory
3729 (lambda _ (chdir "python") #t))
3730 (add-after 'unpack 'make-git-checkout-writable
3731 (lambda _
3732 (for-each make-file-writable (find-files "."))
3733 #t)))))
3734 (propagated-inputs
3735 `(("apache-arrow" ,apache-arrow "lib")
3736 ("python-numpy" ,python-numpy)
3737 ("python-pandas" ,python-pandas)
3738 ("python-six" ,python-six)))
3739 (native-inputs
3740 `(("cmake" ,cmake-minimal)
3741 ("pkg-config" ,pkg-config)
3742 ("python-cython" ,python-cython)
3743 ("python-pytest" ,python-pytest)
3744 ("python-pytest-runner" ,python-pytest-runner)
3745 ("python-setuptools-scm" ,python-setuptools-scm)))
3746 (outputs '("out"))
3747 (home-page "https://arrow.apache.org/docs/python/")
3748 (synopsis "Python bindings for Apache Arrow")
3749 (description
3750 "This library provides a Pythonic API wrapper for the reference Arrow C++
3751 implementation, along with tools for interoperability with pandas, NumPy, and
3752 other traditional Python scientific computing packages.")
3753 (license license:asl2.0)))
3754
3755 (define-public python2-pyarrow
3756 (package-with-python2 python-pyarrow))
3757
3758 (define-public python-crate
3759 (package
3760 (name "python-crate")
3761 (version "0.23.2")
3762 (source (origin
3763 (method url-fetch)
3764 (uri (pypi-uri "crate" version))
3765 (sha256
3766 (base32
3767 "0ngmlvi320c5gsxab0s7qgq0ck4jdlcwvb6lbjhnfprafdp56vvx"))))
3768 (build-system python-build-system)
3769 (propagated-inputs
3770 `(("python-urllib3" ,python-urllib3)))
3771 (home-page "https://github.com/crate/crate-python")
3772 (synopsis "CrateDB Python client")
3773 (description
3774 "This package provides a Python client library for CrateDB.
3775 It implements the Python DB API 2.0 specification and includes support for
3776 SQLAlchemy.")
3777 (license license:asl2.0)))
3778
3779 (define-public libdbi
3780 (package
3781 (name "libdbi")
3782 (version "0.9.0")
3783 (source (origin
3784 (method url-fetch)
3785 (uri (string-append "mirror://sourceforge/libdbi/libdbi/libdbi-"
3786 version "/libdbi-" version ".tar.gz"))
3787 (sha256
3788 (base32
3789 "00s5ra7hdlq25iv23nwf4h1v3kmbiyzx0v9bhggjiii4lpf6ryys"))))
3790 (build-system gnu-build-system)
3791 (synopsis "Database independent abstraction layer in C")
3792 (description
3793 "This library implements a database independent abstraction layer in C,
3794 similar to the DBI/DBD layer in Perl. Writing one generic set of code,
3795 programmers can leverage the power of multiple databases and multiple
3796 simultaneous database connections by using this framework.")
3797 (home-page "http://libdbi.sourceforge.net/")
3798 (license license:lgpl2.1+)))
3799
3800 (define-public libdbi-drivers
3801 (package
3802 (name "libdbi-drivers")
3803 (version "0.9.0")
3804 (source (origin
3805 (method url-fetch)
3806 (uri (string-append "mirror://sourceforge/libdbi-drivers/"
3807 "libdbi-drivers/libdbi-drivers-" version
3808 "/libdbi-drivers-" version ".tar.gz"))
3809 (sha256
3810 (base32
3811 "0m680h8cc4428xin4p733azysamzgzcmv4psjvraykrsaz6ymlj3"))))
3812 (build-system gnu-build-system)
3813 (native-inputs
3814 `(;; For tests.
3815 ("inetutils" ,inetutils)
3816 ("glibc-locales" ,glibc-locales)
3817 ("mariadb" ,mariadb)))
3818 (inputs
3819 `(("libdbi" ,libdbi)
3820 ("mariadb:dev" ,mariadb "dev")
3821 ("mariadb:lib" ,mariadb "lib")
3822 ("postgresql" ,postgresql)
3823 ("sqlite" ,sqlite)))
3824 (arguments
3825 `(#:configure-flags
3826 (let ((libdbi (assoc-ref %build-inputs "libdbi"))
3827 (mysql:inc (assoc-ref %build-inputs "mariadb:dev"))
3828 (mysql:lib (assoc-ref %build-inputs "mariadb:lib"))
3829 (postgresql (assoc-ref %build-inputs "postgresql"))
3830 (sqlite (assoc-ref %build-inputs "sqlite")))
3831 (list "--disable-docs"
3832 (string-append "--with-dbi-incdir=" libdbi "/include")
3833 (string-append "--with-dbi-libdir=" libdbi "/lib")
3834 "--with-mysql"
3835 (string-append "--with-mysql-incdir=" mysql:inc "/include/mysql")
3836 (string-append "--with-mysql-libdir=" mysql:lib "/lib")
3837 "--with-pgsql"
3838 (string-append "--with-pgsql-incdir=" postgresql "/include")
3839 (string-append "--with-pgsql-libdir=" postgresql "/lib")
3840 "--with-sqlite3"
3841 (string-append "--with-sqlite-incdir=" sqlite "/include")
3842 (string-append "--with-sqlite-libdir=" sqlite "/lib")))
3843 #:phases
3844 (modify-phases %standard-phases
3845 (add-after 'unpack 'fix-tests
3846 (lambda* (#:key inputs #:allow-other-keys)
3847 (substitute* "tests/test_mysql.sh"
3848 (("^MYMYSQLD=.*")
3849 (string-append "MYMYSQLD="
3850 (assoc-ref inputs "mariadb")
3851 "/bin/mysqld")))
3852 #t))
3853 (add-after 'install 'remove-empty-directories
3854 (lambda* (#:key outputs #:allow-other-keys)
3855 (let ((var (string-append (assoc-ref outputs "out") "/var")))
3856 (delete-file-recursively var))
3857 #t)))))
3858 (synopsis "Database drivers for the libdbi framework")
3859 (description
3860 "The @code{libdbi-drivers} library provides the database specific drivers
3861 for the @code{libdbi} framework.
3862
3863 The drivers officially supported by @code{libdbi} are:
3864 @itemize
3865 @item MySQL,
3866 @item PostgreSQL,
3867 @item SQLite.
3868 @end itemize")
3869 (home-page "http://libdbi-drivers.sourceforge.net/")
3870 (license license:lgpl2.1+)))
3871
3872 (define-public soci
3873 (package
3874 (name "soci")
3875 (version "4.0.1")
3876 (source (origin
3877 (method git-fetch)
3878 (uri (git-reference
3879 (url "https://github.com/SOCI/soci/")
3880 (commit version)))
3881 (file-name (git-file-name name version))
3882 (sha256
3883 (base32
3884 "14x2gjblkgpflv75wl144cyjp1sis5rbxnr9r2gj3yw16v2av0bp"))))
3885 (build-system cmake-build-system)
3886 (inputs
3887 `(("firebird" ,firebird)
3888 ("postgresql" ,postgresql)
3889 ("sqlite" ,sqlite)
3890 ("odbc" ,unixodbc)
3891 ("boost" ,boost)
3892 ("mariadb:dev" ,mariadb "dev")))
3893 (arguments
3894 `(#:configure-flags
3895 ;; C++11 (-DSOCI_CXX11) is OFF by default. hyperledger-iroha needs it.
3896 (list "-DCMAKE_CXX_STANDARD=17"
3897 "-DSOCI_LIBDIR=lib")
3898 #:tests? #f)) ; may require running database management systems
3899 (synopsis "C++ Database Access Library")
3900 (description
3901 "SOCI is an abstraction layer for several database backends, including
3902 PostreSQL, SQLite, ODBC and MySQL.")
3903 (home-page "http://soci.sourceforge.net/")
3904 (license license:boost1.0)))