gnu/packages/package-management.scm

   1 ;;; GNU Guix --- Functional package management for GNU
   2 ;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019 Ludovic Courtès <ludo@gnu.org>
   3 ;;; Copyright © 2015, 2017 Ricardo Wurmus <rekado@elephly.net>
   4 ;;; Copyright © 2017 Muriithi Frederick Muriuki <fredmanglis@gmail.com>
   5 ;;; Copyright © 2017, 2018 Oleg Pykhalov <go.wigust@gmail.com>
   6 ;;; Copyright © 2017 Roel Janssen <roel@gnu.org>
   7 ;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
   8 ;;; Copyright © 2018 Julien Lepiller <julien@lepiller.eu>
   9 ;;; Copyright © 2018, 2019 Rutger Helling <rhelling@mykolab.com>
  10 ;;; Copyright © 2018 Sou Bunnbu <iyzsong@member.fsf.org>
  11 ;;; Copyright © 2018 Eric Bavier <bavier@member.fsf.org>
  12 ;;; Copyright © 2019 Efraim Flashner <efraim@flashner.co.il>
  13 ;;; Copyright © 2019 Vagrant Cascadian <vagrant@reproducible-builds.org>
  14 ;;; Copyright © 2019 Jonathan Brielmaier <jonathan.brielmaier@web.de>
  15 ;;;
  16 ;;; This file is part of GNU Guix.
  17 ;;;
  18 ;;; GNU Guix is free software; you can redistribute it and/or modify it
  19 ;;; under the terms of the GNU General Public License as published by
  20 ;;; the Free Software Foundation; either version 3 of the License, or (at
  21 ;;; your option) any later version.
  22 ;;;
  23 ;;; GNU Guix is distributed in the hope that it will be useful, but
  24 ;;; WITHOUT ANY WARRANTY; without even the implied warranty of
  25 ;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  26 ;;; GNU General Public License for more details.
  27 ;;;
  28 ;;; You should have received a copy of the GNU General Public License
  29 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
  30
  31 (define-module (gnu packages package-management)
  32   #:use-module (gnu packages)
  33   #:use-module (gnu packages acl)
  34   #:use-module (gnu packages attr)
  35   #:use-module (gnu packages avahi)
  36   #:use-module (gnu packages autotools)
  37   #:use-module (gnu packages backup)
  38   #:use-module (gnu packages base)
  39   #:use-module (gnu packages bdw-gc)
  40   #:use-module (gnu packages bison)
  41   #:use-module (gnu packages bootstrap)          ;for 'bootstrap-guile-origin'
  42   #:use-module (gnu packages check)
  43   #:use-module (gnu packages compression)
  44   #:use-module (gnu packages cpio)
  45   #:use-module (gnu packages crypto)
  46   #:use-module (gnu packages curl)
  47   #:use-module (gnu packages dbm)
  48   #:use-module (gnu packages docbook)
  49   #:use-module (gnu packages file)
  50   #:use-module (gnu packages gettext)
  51   #:use-module (gnu packages glib)
  52   #:use-module (gnu packages gnome)
  53   #:use-module (gnu packages gnupg)
  54   #:use-module (gnu packages graphviz)
  55   #:use-module (gnu packages gtk)
  56   #:use-module (gnu packages guile)
  57   #:use-module (gnu packages guile-xyz)
  58   #:use-module (gnu packages linux)
  59   #:use-module (gnu packages lisp)
  60   #:use-module (gnu packages man)
  61   #:use-module (gnu packages nettle)
  62   #:use-module (gnu packages nss)
  63   #:use-module (gnu packages patchutils)
  64   #:use-module (gnu packages perl)
  65   #:use-module (gnu packages perl-check)
  66   #:use-module (gnu packages pkg-config)
  67   #:use-module (gnu packages popt)
  68   #:use-module (gnu packages python)
  69   #:use-module (gnu packages python-web)
  70   #:use-module (gnu packages python-xyz)
  71   #:use-module (gnu packages serialization)
  72   #:use-module (gnu packages sqlite)
  73   #:use-module (gnu packages ssh)
  74   #:use-module (gnu packages texinfo)
  75   #:use-module (gnu packages time)
  76   #:use-module (gnu packages tls)
  77   #:use-module (gnu packages vim)
  78   #:use-module (gnu packages virtualization)
  79   #:use-module (gnu packages web)
  80   #:use-module (gnu packages xml)
  81   #:use-module (gnu packages xorg)
  82   #:use-module (guix build-system glib-or-gtk)
  83   #:use-module (guix build-system gnu)
  84   #:use-module (guix build-system meson)
  85   #:use-module (guix build-system python)
  86   #:use-module (guix download)
  87   #:use-module (guix gexp)
  88   #:use-module (guix git-download)
  89   #:use-module ((guix licenses) #:prefix license:)
  90   #:use-module (guix packages)
  91   #:use-module (guix utils)
  92   #:use-module (ice-9 match)
  93   #:use-module (srfi srfi-1))
  94
  95 (define (boot-guile-uri arch)
  96   "Return the URI for the bootstrap Guile tarball for ARCH."
  97   (cond ((string=? "armhf" arch)
  98          (string-append "http://alpha.gnu.org/gnu/guix/bootstrap/"
  99                         arch "-linux"
 100                         "/20150101/guile-2.0.11.tar.xz"))
 101         ((string=? "aarch64" arch)
 102          (string-append "http://alpha.gnu.org/gnu/guix/bootstrap/"
 103                         arch "-linux/20170217/guile-2.0.14.tar.xz"))
 104         (else
 105          (string-append "http://alpha.gnu.org/gnu/guix/bootstrap/"
 106                         arch "-linux"
 107                         "/20131110/guile-2.0.9.tar.xz"))))
 108
 109 (define-public guix
 110   ;; Latest version of Guix, which may or may not correspond to a release.
 111   ;; Note: the 'update-guix-package.scm' script expects this definition to
 112   ;; start precisely like this.
 113   (let ((version "1.0.1")
 114         (commit "4a54ed774913480c0f8dad3caf0cd627e4fa8ebf")
 115         (revision 3))
 116     (package
 117       (name "guix")
 118
 119       (version (if (zero? revision)
 120                    version
 121                    (string-append version "-"
 122                                   (number->string revision)
 123                                   "." (string-take commit 7))))
 124       (source (origin
 125                 (method git-fetch)
 126                 (uri (git-reference
 127                       (url "https://git.savannah.gnu.org/r/guix.git")
 128                       (commit commit)))
 129                 (sha256
 130                  (base32
 131                   "14m4a4bn0d5hav6mrks5d7r223knx9dpswgbsc875wgr2921na2h"))
 132                 (file-name (string-append "guix-" version "-checkout"))))
 133       (build-system gnu-build-system)
 134       (arguments
 135        `(#:configure-flags (list
 136                             "--localstatedir=/var"
 137                             "--sysconfdir=/etc"
 138                             (string-append "--with-bash-completion-dir="
 139                                            (assoc-ref %outputs "out")
 140                                            "/etc/bash_completion.d")
 141
 142                             ;; Set 'DOT_USER_PROGRAM' to the empty string so
 143                             ;; we don't keep a reference to Graphviz, whose
 144                             ;; closure is pretty big (too big for the Guix
 145                             ;; system installation image.)
 146                             "ac_cv_path_DOT_USER_PROGRAM=dot"
 147
 148                             ;; To avoid problems with the length of shebangs,
 149                             ;; choose a fixed-width and short directory name
 150                             ;; for tests.
 151                             "ac_cv_guix_test_root=/tmp/guix-tests")
 152          #:parallel-tests? #f         ;work around <http://bugs.gnu.org/21097>
 153
 154          #:modules ((guix build gnu-build-system)
 155                     (guix build utils)
 156                     (srfi srfi-26)
 157                     (ice-9 popen)
 158                     (ice-9 rdelim))
 159
 160          #:phases (modify-phases %standard-phases
 161                     (replace 'bootstrap
 162                       (lambda _
 163                         ;; Make sure 'msgmerge' can modify the PO files.
 164                         (for-each (lambda (po)
 165                                     (chmod po #o666))
 166                                   (find-files "." "\\.po$"))
 167
 168                         (patch-shebang "build-aux/git-version-gen")
 169
 170                         (call-with-output-file ".tarball-version"
 171                           (lambda (port)
 172                             (display ,version port)))
 173
 174                         (invoke "sh" "bootstrap")))
 175                     (add-before 'check 'copy-bootstrap-guile
 176                       (lambda* (#:key system inputs #:allow-other-keys)
 177                         ;; Copy the bootstrap guile tarball in the store used
 178                         ;; by the test suite.
 179                         (define (intern tarball)
 180                           (let ((base (strip-store-file-name tarball)))
 181                             (copy-file tarball base)
 182                             (invoke "./test-env" "guix" "download"
 183                                     (string-append "file://" (getcwd)
 184                                                    "/" base))
 185                             (delete-file base)))
 186
 187
 188                         (intern (assoc-ref inputs "boot-guile"))
 189
 190                         ;; On x86_64 some tests need the i686 Guile.
 191                         ,@(if (and (not (%current-target-system))
 192                                    (string=? (%current-system)
 193                                              "x86_64-linux"))
 194                               '((intern (assoc-ref inputs "boot-guile/i686")))
 195                               '())
 196                         #t))
 197                     (add-after 'unpack 'disable-failing-tests
 198                       ;; XXX FIXME: These tests fail within the build container.
 199                       (lambda _
 200                         (substitute* "tests/syscalls.scm"
 201                           (("^\\(test-(assert|equal) \"(clone|setns|pivot-root)\"" all)
 202                            (string-append "(test-skip 1)\n" all)))
 203                         (substitute* "tests/containers.scm"
 204                           (("^\\(test-(assert|equal)" all)
 205                            (string-append "(test-skip 1)\n" all)))
 206                         (when (file-exists? "tests/guix-environment-container.sh")
 207                           (substitute* "tests/guix-environment-container.sh"
 208                             (("guix environment --version")
 209                              "exit 77\n")))
 210                         #t))
 211                     (add-before 'check 'set-SHELL
 212                       (lambda _
 213                         ;; 'guix environment' tests rely on 'SHELL' having a
 214                         ;; correct value, so set it.
 215                         (setenv "SHELL" (which "sh"))
 216                         #t))
 217                     (add-after 'install 'wrap-program
 218                       (lambda* (#:key inputs outputs #:allow-other-keys)
 219                         ;; Make sure the 'guix' command finds GnuTLS,
 220                         ;; Guile-JSON, and Guile-Git automatically.
 221                         (let* ((out    (assoc-ref outputs "out"))
 222                                (guile  (assoc-ref inputs "guile"))
 223                                (gcrypt (assoc-ref inputs "guile-gcrypt"))
 224                                (json   (assoc-ref inputs "guile-json"))
 225                                (sqlite (assoc-ref inputs "guile-sqlite3"))
 226                                (git    (assoc-ref inputs "guile-git"))
 227                                (bs     (assoc-ref inputs
 228                                                   "guile-bytestructures"))
 229                                (ssh    (assoc-ref inputs "guile-ssh"))
 230                                (gnutls (assoc-ref inputs "gnutls"))
 231                                (locales (assoc-ref inputs "glibc-utf8-locales"))
 232                                (deps   (list gcrypt json sqlite gnutls
 233                                              git bs ssh))
 234                                (effective
 235                                 (read-line
 236                                  (open-pipe* OPEN_READ
 237                                              (string-append guile "/bin/guile")
 238                                              "-c" "(display (effective-version))")))
 239                                (path   (string-join
 240                                         (map (cut string-append <>
 241                                                   "/share/guile/site/"
 242                                                   effective)
 243                                              (delete #f deps))
 244                                         ":"))
 245                                (gopath (string-join
 246                                         (map (cut string-append <>
 247                                                   "/lib/guile/" effective
 248                                                   "/site-ccache")
 249                                              (delete #f deps))
 250                                         ":"))
 251                                (locpath (string-append locales "/lib/locale")))
 252
 253                           (wrap-program (string-append out "/bin/guix")
 254                             `("GUILE_LOAD_PATH" ":" prefix (,path))
 255                             `("GUILE_LOAD_COMPILED_PATH" ":" prefix (,gopath))
 256                             `("GUIX_LOCPATH" ":" suffix (,locpath)))
 257
 258                           #t))))))
 259       (native-inputs `(("pkg-config" ,pkg-config)
 260
 261                        ;; XXX: Keep the development inputs here even though
 262                        ;; they're unnecessary, just so that 'guix environment
 263                        ;; guix' always contains them.
 264                        ("autoconf" ,autoconf-wrapper)
 265                        ("automake" ,automake)
 266                        ("gettext" ,gettext-minimal)
 267                        ("texinfo" ,texinfo)
 268                        ("graphviz" ,graphviz)
 269                        ("help2man" ,help2man)
 270                        ("po4a" ,po4a)))
 271       (inputs
 272        `(("bzip2" ,bzip2)
 273          ("gzip" ,gzip)
 274          ("zlib" ,zlib)                           ;for 'guix publish'
 275          ("lzlib" ,lzlib)            ;for 'guix publish' and 'guix substitute'
 276
 277          ("sqlite" ,sqlite)
 278          ("libgcrypt" ,libgcrypt)
 279
 280          ("guile" ,guile-2.2)
 281
 282          ;; Many tests rely on the 'guile-bootstrap' package, which is why we
 283          ;; have it here.
 284          ("boot-guile" ,(bootstrap-guile-origin (%current-system)))
 285          ;; Some of the tests use "unshare" when it is available.
 286          ("util-linux" ,util-linux)
 287          ,@(if (and (not (%current-target-system))
 288                     (string=? (%current-system) "x86_64-linux"))
 289                `(("boot-guile/i686" ,(bootstrap-guile-origin "i686-linux")))
 290                '())
 291
 292          ("glibc-utf8-locales" ,glibc-utf8-locales)))
 293       (propagated-inputs
 294        `(("gnutls" ,gnutls)
 295          ("guile-gcrypt" ,guile-gcrypt)
 296          ("guile-json" ,guile-json)
 297          ("guile-sqlite3" ,guile-sqlite3)
 298          ("guile-ssh" ,guile-ssh)
 299          ("guile-git" ,guile-git)))
 300
 301       (home-page "https://www.gnu.org/software/guix/")
 302       (synopsis "Functional package manager for installed software packages and versions")
 303       (description
 304        "GNU Guix is a functional package manager for the GNU system, and is
 305 also a distribution thereof.  It includes a virtual machine image.  Besides
 306 the usual package management features, it also supports transactional
 307 upgrades and roll-backs, per-user profiles, and much more.  It is based on
 308 the Nix package manager.")
 309       (license license:gpl3+)
 310       (properties '((ftp-server . "alpha.gnu.org"))))))
 311
 312 (define-public guix-daemon
 313   ;; This package is for internal consumption: it allows us to quickly build
 314   ;; the 'guix-daemon' program and use that in (guix self), used by 'guix
 315   ;; pull'.
 316   (package
 317     (inherit guix)
 318     (properties `((hidden? . #t)))
 319     (name "guix-daemon")
 320
 321     ;; Use a minimum set of dependencies.
 322     (native-inputs
 323      (fold alist-delete (package-native-inputs guix)
 324            '("po4a" "graphviz" "help2man")))
 325     (inputs
 326      `(("gnutls" ,gnutls)
 327        ("guile-git" ,guile-git)
 328        ("guile-json" ,guile-json)
 329        ("guile-gcrypt" ,guile-gcrypt)
 330        ,@(fold alist-delete (package-inputs guix)
 331                '("boot-guile" "boot-guile/i686" "util-linux"))))
 332
 333     (propagated-inputs '())
 334
 335     (arguments
 336      (substitute-keyword-arguments (package-arguments guix)
 337        ((#:configure-flags flags '())
 338         ;; Pretend we have those libraries; we don't actually need them.
 339         `(append ,flags
 340                  '("guix_cv_have_recent_guile_sqlite3=yes"
 341                    "guix_cv_have_recent_guile_ssh=yes")))
 342        ((#:tests? #f #f)
 343         #f)
 344        ((#:phases phases '%standard-phases)
 345         `(modify-phases ,phases
 346            (replace 'build
 347              (lambda _
 348                (invoke "make" "nix/libstore/schema.sql.hh")
 349                (invoke "make" "-j" (number->string
 350                                     (parallel-job-count))
 351                        "guix-daemon")))
 352            (delete 'copy-bootstrap-guile)
 353            (replace 'install
 354              (lambda* (#:key outputs #:allow-other-keys)
 355                (invoke "make" "install-binPROGRAMS"
 356                        "install-nodist_pkglibexecSCRIPTS")
 357
 358                ;; We need to tell 'guix-daemon' which 'guix' command to use.
 359                ;; Here we use a questionable hack where we hard-code root's
 360                ;; current guix, which could be wrong (XXX).  Note that scripts
 361                ;; like 'guix perform-download' do not run as root so we assume
 362                ;; that they have access to /var/guix/profiles/per-user/root.
 363                (let ((out (assoc-ref outputs "out")))
 364                  (substitute* (find-files (string-append out "/libexec"))
 365                    (("exec \".*/bin/guix\"")
 366                     "exec \"${GUIX:-/var/guix/profiles/per-user/root/current-guix/bin/guix}\""))
 367                  #t)))
 368            (delete 'wrap-program)))))))
 369
 370 (define-public guile2.0-guix
 371   (deprecated-package "guile2.0-guix" guix))
 372
 373 (define-public guix-minimal
 374   ;; A version of Guix which is built with the minimal set of dependencies, as
 375   ;; outlined in the README "Requirements" section.  Intended as a CI job, so
 376   ;; marked as hidden.
 377   (hidden-package
 378    (package
 379      (inherit guix)
 380      (name "guix-minimal")
 381      (inputs
 382       `(("guile" ,guile-2.2)
 383         ,@(alist-delete "guile" (package-inputs guix))))
 384      (propagated-inputs
 385       (fold alist-delete
 386             (package-propagated-inputs guix)
 387             '("guile-ssh"))))))
 388
 389 (define (source-file? file stat)
 390   "Return true if FILE is likely a source file, false if it is a typical
 391 generated file."
 392   (define (wrong-extension? file)
 393     (or (string-suffix? "~" file)
 394         (member (file-extension file)
 395                 '("o" "a" "lo" "so" "go"))))
 396
 397   (match (basename file)
 398     ((or ".git" "autom4te.cache" "configure" "Makefile" "Makefile.in" ".libs")
 399      #f)
 400     ((? wrong-extension?)
 401      #f)
 402     (_
 403      #t)))
 404
 405 (define-public current-guix-package
 406   ;; This parameter allows callers to override the package that 'current-guix'
 407   ;; returns.  This is useful when 'current-guix' cannot compute it by itself,
 408   ;; for instance because it's not running from a source code checkout.
 409   (make-parameter #f))
 410
 411 (define-public current-guix
 412   (let* ((repository-root (delay (canonicalize-path
 413                                   (string-append (current-source-directory)
 414                                                  "/../.."))))
 415          (select? (delay (or (git-predicate (force repository-root))
 416                              source-file?))))
 417     (lambda ()
 418       "Return a package representing Guix built from the current source tree.
 419 This works by adding the current source tree to the store (after filtering it
 420 out) and returning a package that uses that as its 'source'."
 421       (or (current-guix-package)
 422           (package
 423             (inherit guix)
 424             (version (string-append (package-version guix) "+"))
 425             (source (local-file (force repository-root) "guix-current"
 426                                 #:recursive? #t
 427                                 #:select? (force select?))))))))
 428
 429 \f
 430 ;;;
 431 ;;; Other tools.
 432 ;;;
 433
 434 (define-public nix
 435   (package
 436     (name "nix")
 437     (version "2.0.4")
 438     (source (origin
 439              (method url-fetch)
 440              (uri (string-append "http://nixos.org/releases/nix/nix-"
 441                                  version "/nix-" version ".tar.xz"))
 442              (sha256
 443               (base32
 444                "0ss9svxlh1pvrdmnqjvjyqjmbqmrdbyfarvbb14i9d4bggzl0r8n"))))
 445     (build-system gnu-build-system)
 446     (native-inputs `(("pkg-config" ,pkg-config)))
 447     (inputs `(("curl" ,curl)
 448               ("bzip2" ,bzip2)
 449               ("libgc" ,libgc)
 450               ("libseccomp" ,libseccomp)
 451               ("libsodium" ,libsodium)
 452               ("openssl" ,openssl)
 453               ("sqlite" ,sqlite)
 454               ("xz" ,xz)))
 455     (home-page "https://nixos.org/nix/")
 456     (synopsis "The Nix package manager")
 457     (description
 458      "Nix is a purely functional package manager.  This means that it treats
 459 packages like values in purely functional programming languages such as
 460 Haskell—they are built by functions that don't have side-effects, and they
 461 never change after they have been built.  Nix stores packages in the Nix
 462 store, usually the directory /nix/store, where each package has its own unique
 463 sub-directory.")
 464     (license license:lgpl2.1+)))
 465
 466 (define-public stow
 467   (package
 468     (name "stow")
 469     (version "2.2.2")
 470     (source (origin
 471               (method url-fetch)
 472               (uri (string-append "mirror://gnu/stow/stow-"
 473                                   version ".tar.gz"))
 474               (sha256
 475                (base32
 476                 "1pvky9fayms4r6fhns8jd0vavszd7d979w62vfd5n88v614pdxz2"))))
 477     (build-system gnu-build-system)
 478     (inputs
 479      `(("perl" ,perl)))
 480     (native-inputs
 481      `(("perl-test-simple" ,perl-test-simple)
 482        ("perl-test-output" ,perl-test-output)
 483        ("perl-capture-tiny" ,perl-capture-tiny)
 484        ("perl-io-stringy" ,perl-io-stringy)))
 485     (home-page "https://www.gnu.org/software/stow/")
 486     (synopsis "Managing installed software packages")
 487     (description
 488      "GNU Stow is a symlink manager.  It generates symlinks to directories
 489 of data and makes them appear to be merged into the same directory.  It is
 490 typically used for managing software packages installed from source, by
 491 letting you install them apart in distinct directories and then create
 492 symlinks to the files in a common directory such as /usr/local.")
 493     (license license:gpl2+)))
 494
 495 (define-public rpm
 496   (package
 497     (name "rpm")
 498     (version "4.14.2.1")
 499     (source (origin
 500               (method url-fetch)
 501               (uri (string-append "http://ftp.rpm.org/releases/rpm-"
 502                                   (version-major+minor version) ".x/rpm-"
 503                                   version ".tar.bz2"))
 504               (sha256
 505                (base32
 506                 "1nmck2fq9h85fgs3zhh6w1avlw5y16cbz5khd459ry3jfd5w4f8i"))))
 507     (build-system gnu-build-system)
 508     (arguments
 509      '(#:configure-flags '("--with-external-db"   ;use the system's bdb
 510                            "--enable-python"
 511                            "--without-lua")
 512        #:phases (modify-phases %standard-phases
 513                   (add-before 'configure 'set-nss-library-path
 514                     (lambda* (#:key inputs #:allow-other-keys)
 515                       (let ((nss (assoc-ref inputs "nss")))
 516                         (setenv "LIBRARY_PATH"
 517                                 (string-append (getenv "LIBRARY_PATH") ":"
 518                                                nss "/lib/nss"))
 519                         #t))))))
 520     (native-inputs
 521      `(("pkg-config" ,pkg-config)))
 522     (inputs
 523      `(("python" ,python)
 524        ("xz" ,xz)
 525        ("bdb" ,bdb)
 526        ("popt" ,popt)
 527        ("nss" ,nss)
 528        ("nspr" ,nspr)
 529        ("libarchive" ,libarchive)
 530        ("nettle" ,nettle)            ;XXX: actually a dependency of libarchive
 531        ("file" ,file)
 532        ("bzip2" ,bzip2)
 533        ("zlib" ,zlib)
 534        ("cpio" ,cpio)))
 535     (home-page "https://rpm.org/")
 536     (synopsis "The RPM Package Manager")
 537     (description
 538      "The RPM Package Manager (RPM) is a command-line driven package
 539 management system capable of installing, uninstalling, verifying, querying,
 540 and updating computer software packages.  Each software package consists of an
 541 archive of files along with information about the package like its version, a
 542 description.  There is also a library permitting developers to manage such
 543 transactions from C or Python.")
 544
 545     ;; The whole is GPLv2+; librpm itself is dual-licensed LGPLv2+ | GPLv2+.
 546     (license license:gpl2+)))
 547
 548 (define-public diffoscope
 549   (package
 550     (name "diffoscope")
 551     (version (git-version "115" "1" "7f3416ffd12572b42c814e43ac15cee44ef48155"))
 552     (source (origin
 553               (method git-fetch)
 554               (uri (git-reference
 555                     (url "https://salsa.debian.org/reproducible-builds/diffoscope.git")
 556                     (commit "7f3416ffd12572b42c814e43ac15cee44ef48155")))
 557               (file-name (git-file-name name version))
 558               (sha256
 559                (base32
 560                 "1pn2rwlz5shdx7s63798wx2v7029bl5if6dlq3i2r6zsnpp0laki"))))
 561     (build-system python-build-system)
 562     (arguments
 563      `(#:phases (modify-phases %standard-phases
 564                   ;; setup.py mistakenly requires python-magic from PyPi, even
 565                   ;; though the Python bindings of `file` are sufficient.
 566                   ;; https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=815844
 567                   (add-after 'unpack 'dependency-on-python-magic
 568                     (lambda _
 569                       (substitute* "setup.py"
 570                         (("'python-magic',") ""))))
 571                   ;; This test is broken because our `file` package has a
 572                   ;; bug in berkeley-db file type detection.
 573                   (add-after 'unpack 'remove-berkeley-test
 574                     (lambda _
 575                       (delete-file "tests/comparators/test_berkeley_db.py")
 576                       #t))
 577                   (add-after 'unpack 'embed-tool-references
 578                     (lambda* (#:key inputs #:allow-other-keys)
 579                       (substitute* "diffoscope/comparators/utils/compare.py"
 580                         (("\\['xxd',")
 581                          (string-append "['" (which "xxd") "',")))
 582                       (substitute* "diffoscope/comparators/elf.py"
 583                         (("@tool_required\\('readelf'\\)") "")
 584                         (("get_tool_name\\('readelf'\\)")
 585                          (string-append "'" (which "readelf") "'")))
 586                       (substitute* "diffoscope/comparators/directory.py"
 587                         (("@tool_required\\('stat'\\)") "")
 588                         (("@tool_required\\('getfacl'\\)") "")
 589                         (("\\['stat',")
 590                          (string-append "['" (which "stat") "',"))
 591                         (("\\['getfacl',")
 592                          (string-append "['" (which "getfacl") "',")))
 593                       #t))
 594                   (add-before 'check 'delete-failing-test
 595                     (lambda _
 596                       ;; this requires /sbin to be on the path
 597                       (delete-file "tests/test_tools.py")
 598                       #t)))))
 599     (inputs `(("rpm" ,rpm)                        ;for rpm-python
 600               ("python-file" ,python-file)
 601               ("python-debian" ,python-debian)
 602               ("python-libarchive-c" ,python-libarchive-c)
 603               ("python-tlsh" ,python-tlsh)
 604               ("acl" ,acl)                        ;for getfacl
 605               ("colordiff" ,colordiff)
 606               ("xxd" ,xxd)))
 607     ;; Below are modules used for tests.
 608     (native-inputs `(("python-pytest" ,python-pytest)
 609                      ("python-chardet" ,python-chardet)))
 610     (home-page "https://diffoscope.org/")
 611     (synopsis "Compare files, archives, and directories in depth")
 612     (description
 613      "Diffoscope tries to get to the bottom of what makes files or directories
 614 different.  It recursively unpacks archives of many kinds and transforms
 615 various binary formats into more human readable forms to compare them.  It can
 616 compare two tarballs, ISO images, or PDFs just as easily.")
 617     (license license:gpl3+)))
 618
 619 (define-public trydiffoscope
 620  (package
 621    (name "trydiffoscope")
 622    (version "67.0.1")
 623    (source
 624     (origin
 625       (method git-fetch)
 626       (uri (git-reference
 627             (url "https://salsa.debian.org/reproducible-builds/trydiffoscope.git")
 628             (commit version)))
 629       (file-name (git-file-name name version))
 630       (sha256
 631        (base32
 632         "03b66cjii7l2yiwffj6ym6mycd5drx7prfp4j2550281pias6mjh"))))
 633     (arguments
 634      `(#:phases
 635        (modify-phases %standard-phases
 636          (add-after 'install 'install-doc
 637            (lambda* (#:key outputs #:allow-other-keys)
 638              (let* ((share (string-append (assoc-ref outputs "out") "/share/")))
 639                (mkdir-p (string-append share "/man/man1/" ))
 640                (invoke "rst2man.py"
 641                        "trydiffoscope.1.rst"
 642                        (string-append share "/man/man1/trydiffoscope.1"))
 643                (mkdir-p (string-append share "/doc/" ,name "-" ,version))
 644                (install-file "./README.rst"
 645                           (string-append share "/doc/" ,name "-" ,version)))
 646              #t)))))
 647     (propagated-inputs
 648      `(("python-requests" ,python-requests)))
 649     (native-inputs
 650      `(("gzip" ,gzip)
 651        ("python-docutils" ,python-docutils)))
 652     (build-system python-build-system)
 653     (home-page "https://try.diffoscope.org")
 654     (synopsis "Client for remote diffoscope service")
 655     (description "This is a client for the @url{https://try.diffoscope.org,
 656 remote diffoscope service}.
 657
 658 Diffoscope tries to get to the bottom of what makes files or directories
 659 different.  It recursively unpacks archives of many kinds and transforms
 660 various binary formats into more human readable forms to compare them.  It can
 661 compare two tarballs, ISO images, or PDFs just as easily.
 662
 663 Results are displayed by default, stored as local text or html files, or made
 664 available via a URL on @url{https://try.diffoscope.org}.  Results stored on the
 665 server are purged after 30 days.")
 666     (license license:gpl3+)))
 667
 668 (define-public python-anaconda-client
 669   (package
 670     (name "python-anaconda-client")
 671     (version "1.6.3")
 672     (source
 673      (origin
 674        (method url-fetch)
 675        (uri (string-append "https://github.com/Anaconda-Platform/"
 676                            "anaconda-client/archive/" version ".tar.gz"))
 677        (file-name (string-append name "-" version ".tar.gz"))
 678        (sha256
 679         (base32
 680          "1wv4wi6k5jz7rlwfgvgfdizv77x3cr1wa2aj0k1595g7fbhkjhz2"))))
 681     (build-system python-build-system)
 682     (propagated-inputs
 683      `(("python-pyyaml" ,python-pyyaml)
 684        ("python-requests" ,python-requests)
 685        ("python-clyent" ,python-clyent)))
 686     (native-inputs
 687      `(("python-pytz" ,python-pytz)
 688        ("python-dateutil" ,python-dateutil)
 689        ("python-mock" ,python-mock)
 690        ("python-coverage" ,python-coverage)
 691        ("python-pillow" ,python-pillow)))
 692     (arguments
 693      `(#:phases
 694        (modify-phases %standard-phases
 695          ;; This is needed for some tests.
 696          (add-before 'check 'set-up-home
 697            (lambda* _ (setenv "HOME" "/tmp") #t))
 698          (add-before 'check 'remove-network-tests
 699            (lambda* _
 700              ;; Remove tests requiring a network connection
 701              (let ((network-tests '("tests/test_upload.py"
 702                                     "tests/test_authorizations.py"
 703                                     "tests/test_login.py"
 704                                     "tests/test_whoami.py"
 705                                     "utils/notebook/tests/test_data_uri.py"
 706                                     "utils/notebook/tests/test_base.py"
 707                                     "utils/notebook/tests/test_downloader.py"
 708                                     "inspect_package/tests/test_conda.py")))
 709                (with-directory-excursion "binstar_client"
 710                  (for-each delete-file network-tests)))
 711              #t)))))
 712     (home-page "https://github.com/Anaconda-Platform/anaconda-client")
 713     (synopsis "Anaconda Cloud command line client library")
 714     (description
 715      "Anaconda Cloud command line client library provides an interface to
 716 Anaconda Cloud.  Anaconda Cloud is useful for sharing packages, notebooks and
 717 environments.")
 718     (license license:bsd-3)))
 719
 720 (define-public python2-anaconda-client
 721   (package-with-python2 python-anaconda-client))
 722
 723 (define-public python-conda
 724   (package
 725     (name "python-conda")
 726     (version "4.3.16")
 727     (source
 728      (origin
 729        (method url-fetch)
 730        (uri (string-append "https://github.com/conda/conda/archive/"
 731                            version ".tar.gz"))
 732        (file-name (string-append name "-" version ".tar.gz"))
 733        (sha256
 734         (base32
 735          "1jq8hyrc5npb5sf4vw6s6by4602yj8f79vzpbwdfgpkn02nfk1dv"))))
 736     (build-system python-build-system)
 737     (arguments
 738      `(#:phases
 739        (modify-phases %standard-phases
 740          (add-before 'build 'create-version-file
 741            (lambda _
 742              (with-output-to-file "conda/.version"
 743                (lambda () (display ,version)))
 744              #t))
 745          (add-before 'check 'remove-failing-tests
 746            (lambda _
 747              ;; These tests require internet/network access
 748              (let ((network-tests '("test_cli.py"
 749                                     "test_create.py"
 750                                     "test_export.py"
 751                                     "test_fetch.py"
 752                                     "test_history.py"
 753                                     "test_info.py"
 754                                     "test_install.py"
 755                                     "test_priority.py"
 756                                     "conda_env/test_cli.py"
 757                                     "conda_env/test_create.py"
 758                                     "conda_env/specs/test_notebook.py"
 759                                     "conda_env/utils/test_notebooks.py"
 760                                     "core/test_index.py"
 761                                     "core/test_repodata.py")))
 762                (with-directory-excursion "tests"
 763                  (for-each delete-file network-tests)
 764
 765                  ;; FIXME: This test creates a file, then deletes it and tests
 766                  ;; that the file was deleted.  For some reason it fails when
 767                  ;; building with guix, but does not when you run it in the
 768                  ;; directory left when you build with the --keep-failed
 769                  ;; option
 770                  (delete-file "gateways/disk/test_delete.py")
 771                  #t))))
 772          (replace 'check
 773            (lambda _
 774              (setenv "HOME" "/tmp")
 775              (invoke "py.test"))))))
 776     (native-inputs
 777      `(("python-cytoolz" ,python-cytoolz)
 778        ("python-ruamel.yaml" ,python-ruamel.yaml)
 779        ("python-requests" ,python-requests)
 780        ("python-pycosat" ,python-pycosat)
 781        ("python-pytest" ,python-pytest)
 782        ("python-responses" ,python-responses)
 783        ("python-pyyaml" ,python-pyyaml)
 784        ("python-anaconda-client" ,python-anaconda-client)))
 785     (home-page "https://github.com/conda/conda")
 786     (synopsis "Cross-platform, OS-agnostic, system-level binary package manager")
 787     (description
 788      "Conda is a cross-platform, Python-agnostic binary package manager.  It
 789 is the package manager used by Anaconda installations, but it may be used for
 790 other systems as well.  Conda makes environments first-class citizens, making
 791 it easy to create independent environments even for C libraries.  Conda is
 792 written entirely in Python.
 793
 794 This package provides Conda as a library.")
 795     (license license:bsd-3)))
 796
 797 (define-public python2-conda
 798   (let ((base (package-with-python2
 799                (strip-python2-variant python-conda))))
 800     (package (inherit base)
 801              (native-inputs
 802               `(("python2-enum34" ,python2-enum34)
 803                 ,@(package-native-inputs base))))))
 804
 805 (define-public conda
 806   (package (inherit python-conda)
 807     (name "conda")
 808     (arguments
 809      (substitute-keyword-arguments (package-arguments python-conda)
 810        ((#:phases phases)
 811         `(modify-phases ,phases
 812            (replace 'build
 813              (lambda* (#:key outputs #:allow-other-keys)
 814                ;; This test fails when run before installation.
 815                (delete-file "tests/test_activate.py")
 816
 817                ;; Fix broken defaults
 818                (substitute* "conda/base/context.py"
 819                  (("return sys.prefix")
 820                   (string-append "return \"" (assoc-ref outputs "out") "\""))
 821                  (("return (prefix_is_writable\\(self.root_prefix\\))" _ match)
 822                   (string-append "return False if self.root_prefix == self.conda_prefix else "
 823                                  match)))
 824
 825                ;; The util/setup-testing.py is used to build conda in
 826                ;; application form, rather than the default, library form.
 827                ;; With this, we are able to run commands like `conda --help`
 828                ;; directly on the command line
 829                (invoke "python" "utils/setup-testing.py" "build_py")))
 830            (replace 'install
 831              (lambda* (#:key inputs outputs #:allow-other-keys)
 832                (let* ((out (assoc-ref outputs "out"))
 833                       (target (string-append out "/lib/python"
 834                                              ((@@ (guix build python-build-system)
 835                                                   get-python-version)
 836                                               (assoc-ref inputs "python"))
 837                                              "/site-packages/")))
 838                  ;; The installer aborts if the target directory is not on
 839                  ;; PYTHONPATH.
 840                  (setenv "PYTHONPATH"
 841                          (string-append target ":" (getenv "PYTHONPATH")))
 842
 843                  ;; And it aborts if the directory doesn't exist.
 844                  (mkdir-p target)
 845                  (invoke "python" "utils/setup-testing.py" "install"
 846                          (string-append "--prefix=" out)))))
 847            ;; The "activate" and "deactivate" scripts don't need wrapping.
 848            ;; They also break when they are renamed.
 849            (add-after 'wrap 'undo-wrap
 850              (lambda* (#:key outputs #:allow-other-keys)
 851                (with-directory-excursion (string-append (assoc-ref outputs "out") "/bin/")
 852                  (delete-file "deactivate")
 853                  (rename-file ".deactivate-real" "deactivate")
 854                  (delete-file "activate")
 855                  (rename-file ".activate-real" "activate")
 856                  #t)))))))
 857     (description
 858      "Conda is a cross-platform, Python-agnostic binary package manager.  It
 859 is the package manager used by Anaconda installations, but it may be used for
 860 other systems as well.  Conda makes environments first-class citizens, making
 861 it easy to create independent environments even for C libraries.  Conda is
 862 written entirely in Python.")))
 863
 864 (define-public gwl
 865   (package
 866     (name "gwl")
 867     (version "0.1.1")
 868     (source (origin
 869               (method url-fetch)
 870               (uri (string-append "https://www.guixwl.org/releases/gwl-"
 871                                   version ".tar.gz"))
 872               (sha256
 873                (base32
 874                 "06pm967mq1wyggx7l0nfapw5s0k5qc5r9lawk2v3db868br779a7"))))
 875     (build-system gnu-build-system)
 876     (native-inputs
 877      `(("autoconf" ,autoconf)
 878        ("automake" ,automake)
 879        ("pkg-config" ,pkg-config)))
 880     (inputs
 881      `(("guile" ,guile-2.2)))
 882     (propagated-inputs
 883      `(("guix" ,guix)
 884        ("guile-commonmark" ,guile-commonmark)))
 885     (home-page "https://www.guixwl.org")
 886     (synopsis "Workflow management extension for GNU Guix")
 887     (description "This project provides two subcommands to GNU Guix and
 888 introduces two record types that provide a workflow management extension built
 889 on top of GNU Guix.")
 890     ;; The Scheme modules in guix/ and gnu/ are licensed GPL3+,
 891     ;; the web interface modules in gwl/ are licensed AGPL3+,
 892     ;; and the fonts included in this package are licensed OFL1.1.
 893     (license (list license:gpl3+ license:agpl3+ license:silofl1.1))))
 894
 895 (define-public gcab
 896   (package
 897     (name "gcab")
 898     (version "1.2")
 899     (source (origin
 900               (method url-fetch)
 901               (uri (string-append "mirror://gnome/sources/gcab/"
 902                                   version "/gcab-" version ".tar.xz"))
 903               (sha256
 904                (base32
 905                 "038h5kk41si2hc9d9169rrlvp8xgsxq27kri7hv2vr39gvz9cbas"))))
 906     (build-system meson-build-system)
 907     (native-inputs
 908      `(("glib:bin" ,glib "bin")         ; for glib-mkenums
 909        ("intltool" ,intltool)
 910        ("pkg-config" ,pkg-config)
 911        ("vala" ,vala)))
 912     (inputs
 913      `(("glib" ,glib)
 914        ("zlib" ,zlib)))
 915     (arguments
 916      `(#:configure-flags
 917        ;; XXX This ‘documentation’ is for developers, and fails informatively:
 918        ;; Error in gtkdoc helper script: 'gtkdoc-mkhtml' failed with status 5
 919        (list "-Ddocs=false"
 920              "-Dintrospection=false")))
 921     (home-page "https://wiki.gnome.org/msitools") ; no dedicated home page
 922     (synopsis "Microsoft Cabinet file manipulation library")
 923     (description
 924      "The libgcab library provides GObject functions to read, write, and modify
 925 Microsoft cabinet (.@dfn{CAB}) files.")
 926     (license (list license:gpl2+        ; tests/testsuite.at
 927                    license:lgpl2.1+)))) ; the rest
 928
 929 (define-public msitools
 930   (package
 931     (name "msitools")
 932     (version "0.99")
 933     (source (origin
 934               (method url-fetch)
 935               (uri (string-append "mirror://gnome/sources/msitools/"
 936                                   version "/msitools-" version ".tar.xz"))
 937               (sha256
 938                (base32
 939                 "0d9nidn5zc81bc30w119933rn2g87mrsqyqkndg20srkbsd96xfl"))))
 940     (build-system gnu-build-system)
 941     (native-inputs
 942      `(("bison" ,bison)
 943        ("pkg-config" ,pkg-config)))
 944     (inputs
 945      `(("gcab" ,gcab)
 946        ("glib" ,glib)
 947        ("libgsf" ,libgsf)
 948        ("libxml2" ,libxml2)
 949        ("uuid" ,util-linux)))
 950     (home-page "https://wiki.gnome.org/msitools")
 951     (synopsis "Windows Installer file manipulation tool")
 952     (description
 953      "msitools is a collection of command-line tools to inspect, extract, build,
 954 and sign Windows@tie{}Installer (.@dfn{MSI}) files.  It aims to be a solution
 955 for packaging and deployment of cross-compiled Windows applications.")
 956     (license license:lgpl2.1+)))
 957
 958 (define-public libostree
 959   (package
 960     (name "libostree")
 961     (version "2018.9.1")
 962     (source (origin
 963               (method url-fetch)
 964               (uri (string-append
 965                     "https://github.com/ostreedev/ostree/releases/download/v"
 966                     (version-major+minor version) "/libostree-" version ".tar.xz"))
 967               (sha256
 968                (base32
 969                 "01mygpkbl9sk2vr3hjbpih6qlg8lwx0q5lklm09f7jfwfpnwyqzj"))))
 970     (build-system gnu-build-system)
 971     (arguments
 972      '(#:phases
 973        (modify-phases %standard-phases
 974          (add-before 'check 'pre-check
 975            (lambda _
 976              ;; Don't try to use the non-existing '/var/tmp' as test
 977              ;; directory.
 978              (setenv "TEST_TMPDIR" (getenv "TMPDIR"))
 979              #t)))
 980        ;; XXX: fails with:
 981        ;;     tap-driver.sh: internal error getting exit status
 982        ;;     tap-driver.sh: fatal: I/O or internal error
 983        #:tests? #f))
 984     (native-inputs
 985      `(("attr" ,attr)                   ; for tests
 986        ("bison" ,bison)
 987        ("glib:bin" ,glib "bin")          ; for 'glib-mkenums'
 988        ("gobject-introspection" ,gobject-introspection)
 989        ("pkg-config" ,pkg-config)
 990        ("xsltproc" ,libxslt)))
 991     (inputs
 992      `(("avahi" ,avahi)
 993        ("docbook-xml" ,docbook-xml-4.2)
 994        ("docbook-xsl" ,docbook-xsl)
 995        ("e2fsprogs" ,e2fsprogs)
 996        ("fuse" ,fuse)
 997        ("glib" ,glib)
 998        ("gpgme" ,gpgme)
 999        ("libarchive" ,libarchive)
1000        ("libsoup" ,libsoup)
1001        ("nettle" ,nettle)               ; required by 'libarchive.la'
1002        ("util-linux" ,util-linux)))
1003     (home-page "https://ostree.readthedocs.io/en/latest/")
1004     (synopsis "Operating system and container binary deployment and upgrades")
1005     (description
1006      "@code{libostree} is both a shared library and suite of command line
1007 tools that combines a \"git-like\" model for committing and downloading
1008 bootable file system trees, along with a layer for deploying them and managing
1009 the boot loader configuration.")
1010     (license license:lgpl2.0+)))
1011
1012 (define-public flatpak
1013   (package
1014    (name "flatpak")
1015    (version "1.2.4")
1016    (source
1017     (origin
1018      (method url-fetch)
1019      (uri (string-append "https://github.com/flatpak/flatpak/releases/download/"
1020                          version "/flatpak-" version ".tar.xz"))
1021      (sha256
1022       (base32
1023        "1qf3ys84fzv11z6f6li59rxjdjbyrv7cyi9539k73r9i9pckjr8v"))))
1024
1025    ;; Wrap 'flatpak' so that GIO_EXTRA_MODULES is set, thereby allowing GIO to
1026    ;; find the TLS backend in glib-networking.
1027    (build-system glib-or-gtk-build-system)
1028
1029    (arguments
1030     '(#:tests? #f ;; Tests fail due to trying to create files where it can't.
1031       #:configure-flags (list
1032                          "--enable-documentation=no" ;; FIXME
1033                          "--enable-system-helper=no"
1034                          "--localstatedir=/var"
1035                          (string-append "--with-system-bubblewrap="
1036                                         (assoc-ref %build-inputs "bubblewrap")
1037                                         "/bin/bwrap"))))
1038    (native-inputs `(("bison" ,bison)
1039                     ("gettext" ,gnu-gettext)
1040                     ("glib:bin" ,glib "bin") ; for glib-mkenums + gdbus-codegen
1041                     ("gobject-introspection" ,gobject-introspection)
1042                     ("libcap" ,libcap)
1043                     ("pkg-config" ,pkg-config)))
1044    (propagated-inputs `(("glib-networking" ,glib-networking)
1045                         ("gnupg" ,gnupg)
1046                         ("gsettings-desktop-schemas"
1047                          ,gsettings-desktop-schemas)))
1048    (inputs `(("appstream-glib" ,appstream-glib)
1049              ("bubblewrap" ,bubblewrap)
1050              ("dconf" ,dconf)
1051              ("gdk-pixbuf" ,gdk-pixbuf)
1052              ("gpgme" ,gpgme)
1053              ("json-glib" ,json-glib)
1054              ("libarchive" ,libarchive)
1055              ("libostree" ,libostree)
1056              ("libseccomp" ,libseccomp)
1057              ("libsoup" ,libsoup)
1058              ("libxau" ,libxau)
1059              ("libxml2" ,libxml2)
1060              ("nettle" ,nettle)
1061              ("util-linux" ,util-linux)))
1062    (home-page "https://flatpak.org")
1063    (synopsis "System for building, distributing, and running sandboxed desktop
1064 applications")
1065    (description "Flatpak is a system for building, distributing, and running
1066 sandboxed desktop applications on GNU/Linux.")
1067    (license license:lgpl2.1+)))