1 ;;; GNU Guix --- Functional package management for GNU
2 ;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2018 Ludovic Courtès <ludo@gnu.org>
3 ;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr>
4 ;;; Copyright © 2013, 2017 Cyril Roelandt <tipecaml@gmail.com>
5 ;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org>
6 ;;; Copyright © 2014, 2015, 2016, 2018 Mark H Weaver <mhw@netris.org>
7 ;;; Copyright © 2014, 2015 Eric Bavier <bavier@member.fsf.org>
8 ;;; Copyright © 2015, 2016 Sou Bunnbu <iyzsong@gmail.com>
9 ;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
10 ;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
11 ;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
12 ;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org>
13 ;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
14 ;;; Copyright © 2016, 2017 Nikita <nikita@n0.is>
15 ;;; Copyright © 2016, 2017, 2018 Roel Janssen <roel@gnu.org>
16 ;;; Copyright © 2016 David Craven <david@craven.ch>
17 ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
18 ;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca>
19 ;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org>
20 ;;; Copyright © 2016, 2017, 2018, 2019, 2020 Marius Bakke <mbakke@fastmail.com>
21 ;;; Copyright © 2017, 2018 Julien Lepiller <julien@lepiller.eu>
22 ;;; Copyright © 2017, 2020 Thomas Danckaert <post@thomasdanckaert.be>
23 ;;; Copyright © 2017 Jelle Licht <jlicht@fsfe.org>
24 ;;; Copyright © 2017 Adriano Peluso <catonano@gmail.com>
25 ;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
26 ;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
27 ;;; Copyright © 2017, 2018 Alex Vong <alexvong1995@gmail.com>
28 ;;; Copyright © 2017, 2018 Ben Woodcroft <donttrustben@gmail.com>
29 ;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
30 ;;; Copyright © 2017, 2018 Pierre Langlois <pierre.langlois@gmx.com>
31 ;;; Copyright © 2015, 2017, 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
32 ;;; Copyright © 2017 Kristofer Buffington <kristoferbuffington@gmail.com>
33 ;;; Copyright © 2018 Amirouche Boubekki <amirouche@hypermove.net>
34 ;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
35 ;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com>
36 ;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us>
37 ;;; Copyright © 2019 Alex Griffin <a@ajgrf.com>
38 ;;; Copyright © 2019 Gábor Boskovits <boskovits@gmail.com>
39 ;;; Copyright © 2019 Pierre Langlois <pierre.langlois@gmx.com>
40 ;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
41 ;;; Copyright © 2020 Pierre Neidhardt <mail@ambrevar.xyz>
42 ;;; Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
43 ;;; Copyright © 2020 Tanguy Le Carrour <tanguy@bioneland.org>
44 ;;; Copyright © 2020 Lars-Dominik Braun <ldb@leibniz-psychology.org>
45 ;;; Copyright © 2020 Guy Fleury Iteriteka <gfleury@disroot.org>
46 ;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
47 ;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
49 ;;; This file is part of GNU Guix.
51 ;;; GNU Guix is free software; you can redistribute it and/or modify it
52 ;;; under the terms of the GNU General Public License as published by
53 ;;; the Free Software Foundation; either version 3 of the License, or (at
54 ;;; your option) any later version.
56 ;;; GNU Guix is distributed in the hope that it will be useful, but
57 ;;; WITHOUT ANY WARRANTY; without even the implied warranty of
58 ;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
59 ;;; GNU General Public License for more details.
61 ;;; You should have received a copy of the GNU General Public License
62 ;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
64 (define-module (gnu packages databases)
65 #:use-module (gnu packages)
66 #:use-module (gnu packages admin)
67 #:use-module (gnu packages algebra)
68 #:use-module (gnu packages autotools)
69 #:use-module (gnu packages avahi)
70 #:use-module (gnu packages base)
71 #:use-module (gnu packages bash)
72 #:use-module (gnu packages bison)
73 #:use-module (gnu packages boost)
74 #:use-module (gnu packages check)
75 #:use-module (gnu packages cmake)
76 #:use-module (gnu packages compression)
77 #:use-module (gnu packages crypto)
78 #:use-module (gnu packages curl)
79 #:use-module (gnu packages cyrus-sasl)
80 #:use-module (gnu packages dbm)
81 #:use-module (gnu packages emacs)
82 #:use-module (gnu packages flex)
83 #:use-module (gnu packages gcc)
84 #:use-module (gnu packages gettext)
85 #:use-module (gnu packages glib)
86 #:use-module (gnu packages gnupg)
87 #:use-module (gnu packages guile)
88 #:use-module (gnu packages time)
89 #:use-module (gnu packages golang)
90 #:use-module (gnu packages jemalloc)
91 #:use-module (gnu packages language)
92 #:use-module (gnu packages libevent)
93 #:use-module (gnu packages linux)
94 #:use-module (gnu packages logging)
95 #:use-module (gnu packages man)
96 #:use-module (gnu packages maths)
97 #:use-module (gnu packages ncurses)
98 #:use-module (gnu packages onc-rpc)
99 #:use-module (gnu packages parallel)
100 #:use-module (gnu packages pcre)
101 #:use-module (gnu packages perl)
102 #:use-module (gnu packages perl-check)
103 #:use-module (gnu packages perl-web)
104 #:use-module (gnu packages pkg-config)
105 #:use-module (gnu packages popt)
106 #:use-module (gnu packages protobuf)
107 #:use-module (gnu packages python)
108 #:use-module (gnu packages python-crypto)
109 #:use-module (gnu packages python-web)
110 #:use-module (gnu packages python-science)
111 #:use-module (gnu packages python-xyz)
112 #:use-module (gnu packages rdf)
113 #:use-module (gnu packages readline)
114 #:use-module (gnu packages regex)
115 #:use-module (gnu packages rpc)
116 #:use-module (gnu packages ruby)
117 #:use-module (gnu packages serialization)
118 #:use-module (gnu packages sphinx)
119 #:use-module (gnu packages sqlite)
120 #:use-module (gnu packages tcl)
121 #:use-module (gnu packages terminals)
122 #:use-module (gnu packages textutils)
123 #:use-module (gnu packages tls)
124 #:use-module (gnu packages valgrind)
125 #:use-module (gnu packages web)
126 #:use-module (gnu packages xml)
127 #:use-module ((guix licenses) #:prefix license:)
128 #:use-module (guix packages)
129 #:use-module (guix download)
130 #:use-module (guix bzr-download)
131 #:use-module (guix git-download)
132 #:use-module (guix hg-download)
133 #:use-module (guix build-system emacs)
134 #:use-module (guix build-system gnu)
135 #:use-module (guix build-system go)
136 #:use-module (guix build-system perl)
137 #:use-module (guix build-system python)
138 #:use-module (guix build-system ruby)
139 #:use-module (guix build-system cmake)
140 #:use-module (guix build-system scons)
141 #:use-module (guix build-system trivial)
142 #:use-module (guix utils)
143 #:use-module (srfi srfi-1)
144 #:use-module (srfi srfi-26)
145 #:use-module (ice-9 match))
147 (define-public 4store
154 (url "https://github.com/4store/4store")
155 (commit (string-append "v" version))))
156 (file-name (git-file-name name version))
158 (base32 "1kzdfmwpzy64cgqlkcz5v4klwx99w0jk7afckyf7yqbqb4rydmpk"))
159 (patches (search-patches "4store-unset-preprocessor-directive.patch"
160 "4store-fix-buildsystem.patch"))))
161 (build-system gnu-build-system)
165 ("autoconf" ,autoconf)
166 ("automake" ,automake)
167 ("gettext" ,gettext-minimal)
169 ("pcre" ,pcre "bin") ;for 'pcre-config'
170 ("pkg-config" ,pkg-config)))
176 ("readline" ,readline)
178 ("cyrus-sasl" ,cyrus-sasl)
180 ("util-linux" ,util-linux "lib")))
181 ;; http://www.4store.org has been down for a while now.
182 (home-page "https://github.com/4store/4store")
183 (synopsis "Clustered RDF storage and query engine")
184 (description "4store is a RDF/SPARQL store written in C, supporting
185 either single machines or networked clusters.")
186 (license license:gpl3+)))
188 (define-public go-gopkg.in-mgo.v2
190 (name "go-gopkg.in-mgo.v2")
191 (version "2016.08.01")
195 (url "https://github.com/go-mgo/mgo")
196 (commit (string-append "r" version))))
197 (file-name (git-file-name name version))
200 "0rwbi1z63w43b0z9srm8m7iz1fdwx7bq7n2mz862d6liiaqa59jd"))))
201 (build-system go-build-system)
203 `(#:import-path "gopkg.in/mgo.v2"
204 ;; TODO: The tests fail as MongoDB fails to start
205 ;; Error parsing command line: unrecognised option '--chunkSize'
208 (modify-phases %standard-phases
209 (delete 'reset-gzip-timestamps)
210 (add-before 'check 'start-mongodb
211 (lambda* (#:key tests? #:allow-other-keys)
213 (with-directory-excursion "src/gopkg.in/mgo.v2"
214 (invoke "make" "startdb")))
216 (add-after 'check 'stop'mongodb
217 (lambda* (#:key tests? #:allow-other-keys)
219 (with-directory-excursion "src/gopkg.in/mgo.v2"
220 (invoke "make" "stopdb")))
223 `(("go-gopkg.in-check.v1" ,go-gopkg.in-check.v1)
225 ("daemontools" ,daemontools)))
226 (synopsis "@code{mgo} offers a rich MongoDB driver for Go.")
228 "@code{mgo} (pronounced as mango) is a MongoDB driver for the Go language.
229 It implements a rich selection of features under a simple API following
230 standard Go idioms.")
231 (home-page "https://labix.org/mgo")
232 (license license:bsd-2)))
234 (define-public ephemeralpg
242 "https://eradman.com/ephemeralpg/code/ephemeralpg-"
245 (base32 "1j0g7g114ma7y7sadbng5p1ss1zsm9zpicm77qspym6565733vvh"))))
246 (build-system gnu-build-system)
248 '(#:make-flags (list "CC=gcc"
249 (string-append "PREFIX=" %output))
251 (modify-phases %standard-phases
252 (delete 'configure) ; no configure script
253 (add-after 'install 'wrap
254 (lambda* (#:key inputs outputs #:allow-other-keys)
255 (let ((out (assoc-ref outputs "out")))
256 (wrap-program (string-append out "/bin/pg_tmp")
258 (,(string-append (assoc-ref inputs "util-linux")
260 ,(string-append (assoc-ref inputs "postgresql")
263 ,(string-append out "/bin")))))
265 #:test-target "test"))
267 `(("postgresql" ,postgresql)
268 ("util-linux" ,util-linux)))
273 (home-page "https://eradman.com/ephemeralpg/")
274 (synopsis "Run temporary PostgreSQL databases")
276 "@code{pg_tmp} creates temporary PostgreSQL databases, suitable for tasks
277 like running software test suites. Temporary databases created with
278 @code{pg_tmp} have a limited shared memory footprint and are automatically
279 garbage-collected after a configurable number of seconds (the default is
281 (license license:isc)))
283 (define-public es-dump-restore
285 (name "es-dump-restore")
290 (uri (rubygems-uri "es_dump_restore" version))
293 "020yk7f1hw48clmf5501z3xv9shsdchyymcv0y2cci2c1xvr1mim"))))
294 (build-system ruby-build-system)
296 '(#:tests? #f)) ;; No testsuite.
298 `(("ruby-httpclient" ,ruby-httpclient)
299 ("ruby-multi-json" ,ruby-multi-json)
300 ("ruby-progress_bar" ,ruby-progress_bar)
301 ("ruby-rubyzip" ,ruby-rubyzip)
302 ("ruby-thor" ,ruby-thor)))
303 (synopsis "Utility for dumping and restoring ElasticSearch indexes")
305 "This package provides a utility for dumping the contents of an
306 ElasticSearch index to a compressed file and restoring the dumpfile back to an
307 ElasticSearch server")
308 (home-page "https://github.com/patientslikeme/es_dump_restore")
309 (license license:expat)))
311 (define-public leveldb
318 (url "https://github.com/google/leveldb")
320 (file-name (git-file-name name version))
323 "0qrnhiyq7r4wa1a4wi82zgns35smj94mcjsc7kfs1k6ia9ys79z7"))))
324 (build-system cmake-build-system)
326 `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON" "-DLEVELDB_BUILD_TESTS=ON")))
328 `(("snappy" ,snappy)))
329 (home-page "https://github.com/google/leveldb")
330 (synopsis "Fast key-value storage library")
332 "LevelDB is a fast key-value storage library that provides an ordered
333 mapping from string keys to string values.")
334 (license license:bsd-3)))
336 (define-public memcached
344 "https://memcached.org/files/memcached-" version ".tar.gz"))
346 (base32 "1r511qr95q0ywdaql3pdjiwzkfqxhhfzb13ilvl7mznfm4iv1myg"))))
347 (build-system gnu-build-system)
349 `(("libevent" ,libevent)
350 ("cyrus-sasl" ,cyrus-sasl)))
351 (home-page "https://memcached.org/")
352 (synopsis "In-memory caching service")
353 (description "Memcached is an in-memory key-value store. It has a small
354 and generic API, and was originally intended for use with dynamic web
356 (license license:bsd-3)))
358 (define-public libmemcached
360 (name "libmemcached")
362 ;; We build from the sources since we want to build the extra HTML
363 ;; documentation which is not included with the release.
367 (url "lp:libmemcached/1.0")
368 (revision (string-append "tag:" version))))
369 (file-name (string-append name "-" version "-checkout"))
372 "1842s4dxdh21gdr46q4dgxigidcs6dkqnbnqjwb9l8r0bqx5nb10"))
374 (search-patches "libmemcached-build-with-gcc7.patch"))))
375 (build-system gnu-build-system)
377 `(("memcached" ,memcached)
379 ("autoconf" ,autoconf)
380 ("automake" ,automake)
384 ("python-sphinx" ,python-sphinx))) ;to build the HTML doc.
386 `(("libevent" ,libevent)
387 ("cyrus-sasl" ,cyrus-sasl)))
388 (outputs '("out" "doc"))
391 (modify-phases %standard-phases
392 (add-before 'bootstrap 'fix-configure.ac
393 ;; Move the AC_CONFIG_AUX_DIR macro use under AC_INIT, otherwise we
394 ;; get the error ``configure: error: cannot find install-sh,
395 ;; install.sh, or shtool in "." "./.." "./../.."`` (see:
396 ;; https://debbugs.gnu.org/cgi/bugreport.cgi?bug=19539 and
397 ;; https://bugs.launchpad.net/libmemcached/+bug/1803922).
399 (delete-file "bootstrap.sh") ;not useful in the context of Guix
400 (substitute* "configure.ac"
401 (("^AC_CONFIG_AUX_DIR\\(\\[build-aux\\]\\).*") "")
402 (("(^AC_INIT.*)" anchor)
403 (string-append anchor "AC_CONFIG_AUX_DIR([build-aux])\n")))
405 (add-before 'bootstrap 'disable-failing-tests
406 ;; See: https://bugs.launchpad.net/libmemcached/+bug/1803926
408 ;; Mark some heavily failing test suites as expected to fail.
409 (substitute* "Makefile.am"
410 (("(XFAIL_TESTS =[^\n]*)" xfail_tests)
411 (string-append xfail_tests " tests/testudp"
412 " tests/libmemcached-1.0/testapp"
413 " tests/libmemcached-1.0/testsocket")))
414 ;; Disable two tests of the unittest test suite.
415 (substitute* "libtest/unittest.cc"
416 ((".*echo_fubar_BINARY \\},.*") "")
417 ((".*application_doesnotexist_BINARY \\},.*") ""))
419 (add-after 'disable-dns-tests 'build-and-install-html-doc
420 (lambda* (#:key outputs #:allow-other-keys)
421 (let ((html (string-append (assoc-ref outputs "doc")
422 "/share/doc/libmemcached/html/")))
423 (invoke "make" "install-html")
424 ;; Cleanup useless files.
425 (for-each delete-file-recursively
426 (map (lambda (x) (string-append html x))
427 '("_sources" ".doctrees" ".buildinfo"))))
429 (home-page "https://libmemcached.org/")
430 (synopsis "C++ library for memcached")
431 (description "libMemcached is a library to use memcached in C/C++
432 applications. It comes with a complete reference guide and documentation of
433 the API, and provides features such as:
435 @item Asynchronous and synchronous transport support
436 @item Consistent hashing and distribution
437 @item Tunable hashing algorithm to match keys
438 @item Access to large object support
439 @item Local replication
441 (license license:bsd-3)))
443 (define-public python-pylibmc
445 (name "python-pylibmc")
450 (uri (pypi-uri "pylibmc" version))
452 (base32 "1sg7d9j0v6g3xg3finf4l1hb72c13vcyyi6rqrc9shbx903d93ca"))))
453 (build-system python-build-system)
456 (modify-phases %standard-phases
457 (add-before 'check 'start-memcached-daemon
458 ;; The test suite requires a memcached server.
460 (invoke "memcached" "-d"))))))
462 `(("memcached" ,memcached)
463 ("python-nose" ,python-nose)))
465 `(("libmemcached" ,libmemcached)
467 ("cyrus-sasl" ,cyrus-sasl)))
468 (home-page "http://sendapatch.se/projects/pylibmc/")
469 (synopsis "Python client for memcached")
471 "@code{pylibmc} is a client in Python for memcached. It is a wrapper
472 around TangentOrg’s libmemcached library, and can be used as a drop-in
473 replacement for the code@{python-memcached} library.")
474 (license license:bsd-3)))
476 (define-public python2-pylibmc
477 (package-with-python2 python-pylibmc))
479 (define-public mongodb
485 (uri (string-append "https://github.com/mongodb/mongo/archive/r"
487 (file-name (string-append name "-" version ".tar.gz"))
489 (base32 "0676lvkljj7a5hdhv78dbykqnqrj9lbn9799mi84b8vbnzsq961r"))
490 (modules '((guix build utils)))
493 (for-each (lambda (dir)
494 (delete-file-recursively
495 (string-append "src/third_party/" dir)))
496 '("pcre-8.41" "scons-2.5.0" "snappy-1.1.3"
497 "valgrind-3.11.0" "wiredtiger"
498 "yaml-cpp-0.5.3" "zlib-1.2.8"))
502 (search-patch "mongodb-support-unknown-linux-distributions.patch")))))
503 (build-system scons-build-system)
505 `(("openssl" ,openssl-1.0)
507 ,@(match (%current-system)
508 ((or "x86_64-linux" "aarch64-linux" "mips64el-linux")
509 `(("wiredtiger" ,wiredtiger)))
511 ("yaml-cpp" ,yaml-cpp)
515 `(("valgrind" ,valgrind)
518 ("python2-pymongo" ,python2-pymongo)
519 ("python2-pyyaml" ,python2-pyyaml)
520 ("tzdata" ,tzdata-for-tests)))
522 `(#:scons ,scons-python2
524 (let ((common-options
525 `(;; "--use-system-tcmalloc" TODO: Missing gperftools
527 ;; wiredtiger is 64-bit only
528 ,,(if (any (cute string-prefix? <> (or (%current-target-system)
530 '("i686-linux" "armhf-linux"))
532 ``"--use-system-wiredtiger")
534 ;; build/opt/mongo/db/fts/unicode/string.o failed: Error 1
535 ;; --use-system-boost
536 "--use-system-snappy"
538 "--use-system-valgrind"
539 ;; "--use-system-stemmer" TODO: Missing relevant package
541 "--disable-warnings-as-errors"
542 ,(format #f "--jobs=~a" (parallel-job-count))
544 (modify-phases %standard-phases
545 (add-after 'unpack 'patch
547 ;; Remove use of GNU extensions in parse_number_test.cpp, to
548 ;; allow compiling with GCC 7 or later
549 ;; https://jira.mongodb.org/browse/SERVER-28063
550 (substitute* "src/mongo/base/parse_number_test.cpp"
551 (("0xabcab\\.defdefP-10")
552 "687.16784283419838"))
554 (add-after 'unpack 'scons-propagate-environment
556 ;; Modify the SConstruct file to arrange for
557 ;; environment variables to be propagated.
558 (substitute* "SConstruct"
559 (("^env = Environment\\(")
560 "env = Environment(ENV=os.environ, "))
562 (add-after 'unpack 'create-version-file
564 (call-with-output-file "version.json"
566 (display ,(simple-format #f "{
572 (apply invoke `("scons"
574 "mongod" "mongo" "mongos"))))
576 (lambda* (#:key tests? inputs #:allow-other-keys)
578 (string-append (assoc-ref inputs "tzdata")
581 ;; Note that with the tests, especially the unittests, the
582 ;; build can take up to ~45GB of space, as many tests are
583 ;; individual executable files, with some being hundreds of
584 ;; megabytes in size.
585 (apply invoke `("scons" ,@common-options "dbtest" "unittests"))
586 (substitute* "build/unittests.txt"
587 ;; TODO: Don't run the async_stream_test, as it hangs
588 (("^build\\/opt\\/mongo\\/executor\\/async\\_stream\\_test\n$")
590 ;; TODO: This test fails
591 ;; Expected 0UL != disks.size() (0 != 0) @src/mongo/util/procparser_test.cpp:476
592 (("^build\\/opt\\/mongo\\/util\\/procparser\\_test\n$")
594 (invoke "python" "buildscripts/resmoke.py"
595 "--suites=dbtest,unittests"
596 (format #f "--jobs=~a" (parallel-job-count))))
599 (lambda* (#:key outputs #:allow-other-keys)
600 (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
601 (install-file "mongod" bin)
602 (install-file "mongos" bin)
603 (install-file "mongo" bin))
605 (home-page "https://www.mongodb.org/")
606 (synopsis "High performance and high availability document database")
608 "Mongo is a high-performance, high availability, schema-free
609 document-oriented database. A key goal of MongoDB is to bridge the gap
610 between key/value stores (which are fast and highly scalable) and traditional
611 RDBMS systems (which are deep in functionality).")
612 (license (list license:agpl3
613 ;; Some parts are licensed under the Apache License
623 (uri (pypi-uri "mycli" version))
625 (base32 "1lq2x95553vdmhw13cxcgsd2g2i32izhsb7hxd4m1iwf9b3msbpv"))))
626 (build-system python-build-system)
628 `(#:tests? #f)) ; tests expect a running MySQL
630 `(("python-cli-helpers" ,python-cli-helpers)
631 ("python-click" ,python-click)
632 ("python-configobj" ,python-configobj)
633 ("python-cryptography" ,python-cryptography)
634 ("python-prompt-toolkit" ,python-prompt-toolkit)
635 ("python-pygments" ,python-pygments)
636 ("python-pymysql" ,python-pymysql)
637 ("python-sqlparse" ,python-sqlparse)))
638 (home-page "http://mycli.net")
640 "Terminal Client for MySQL with AutoCompletion and Syntax Highlighting")
642 "MyCLI is a command line interface for MySQL, MariaDB, and Percona with
643 auto-completion and syntax highlighting.")
644 (license license:bsd-3)))
646 ;; XXX When updating, check whether boost-for-mysql is still needed.
647 ;; It might suffice to patch ‘cmake/boost.cmake’ as done in the past.
654 (uri (list (string-append
655 "https://dev.mysql.com/get/Downloads/MySQL-"
656 (version-major+minor version) "/"
657 name "-" version ".tar.gz")
659 "https://downloads.mysql.com/archives/get/file/"
660 name "-" version ".tar.gz")))
663 "1fhv16zr46pxm1j8vb8x8mh3nwzglg01arz8gnazbmjqldr5idpq"))))
664 (build-system cmake-build-system)
667 '("-DBUILD_CONFIG=mysql_release"
670 "-DDEFAULT_CHARSET=utf8"
671 "-DDEFAULT_COLLATION=utf8_general_ci"
672 "-DMYSQL_DATADIR=/var/lib/mysql"
673 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
674 "-DINSTALL_INFODIR=share/mysql/docs"
675 "-DINSTALL_MANDIR=share/man"
676 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
677 "-DINSTALL_SCRIPTDIR=bin"
678 "-DINSTALL_INCLUDEDIR=include/mysql"
679 "-DINSTALL_DOCREADMEDIR=share/mysql/docs"
680 "-DINSTALL_SUPPORTFILESDIR=share/mysql"
681 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
682 "-DINSTALL_DOCDIR=share/mysql/docs"
683 "-DINSTALL_SHAREDIR=share/mysql"
684 ;; Get rid of test data.
685 "-DINSTALL_MYSQLTESTDIR="
686 "-DINSTALL_SQLBENCHDIR=")
687 #:phases (modify-phases %standard-phases
689 'install 'remove-extra-binaries
690 (lambda* (#:key outputs #:allow-other-keys)
691 (let ((out (assoc-ref outputs "out")))
692 ;; Remove the 3 *_embedded files, which weigh in at
694 (for-each delete-file
695 (find-files (string-append out "/bin")
701 ("pkg-config" ,pkg-config)))
703 `(("boost" ,boost-for-mysql)
705 ("libtirpc" ,libtirpc)
708 ("rpcsvc-proto" ,rpcsvc-proto) ; rpcgen
710 (home-page "https://www.mysql.com/")
711 (synopsis "Fast, easy to use, and popular database")
713 "MySQL is a fast, reliable, and easy to use relational database
714 management system that supports the standardized Structured Query
716 (license license:gpl2)))
718 (define-public mariadb
724 (uri (string-append "https://downloads.mariadb.com/MariaDB"
725 "/mariadb-" version "/source/mariadb-"
729 "1mfs0x4c0z7d306n128dxdawk3llk25vxif5zwl20fv1z5qhz3wx"))
730 (patches (search-patches "mariadb-client-test-32bit.patch"))
731 (modules '((guix build utils)))
734 ;; Delete bundled snappy and xz.
735 (delete-file-recursively "storage/tokudb/PerconaFT/third_party")
736 (substitute* "storage/tokudb/PerconaFT/CMakeLists.txt"
737 ;; This file checks that the bundled sources are present and
738 ;; declares build procedures for them.
739 (("^include\\(TokuThirdParty\\)") ""))
740 (substitute* "storage/tokudb/PerconaFT/ft/CMakeLists.txt"
741 ;; Don't attempt to use the procedures we just removed.
742 ((" build_lzma build_snappy") ""))
744 ;; Preserve CMakeLists.txt for these.
745 (for-each (lambda (file)
746 (unless (string-suffix? "CMakeLists.txt" file)
748 (append (find-files "extra/yassl")
749 (find-files "pcre") (find-files "zlib")))
751 (build-system cmake-build-system)
752 (outputs '("out" "lib" "dev"))
756 "-DBUILD_CONFIG=mysql_release"
757 ;; Linking with libarchive fails, like this:
759 ;; ld: /gnu/store/...-libarchive-3.2.2/lib/libarchive.a(archive_entry.o):
760 ;; relocation R_X86_64_32 against `.bss' can not be used when
761 ;; making a shared object; recompile with -fPIC
763 ;; For now, disable the features that that use libarchive (xtrabackup).
764 "-DWITH_LIBARCHIVE=OFF"
766 ;; Disable the TokuDB engine, because its test suite frequently fails,
767 ;; and loading it crashes the server: <https://bugs.gnu.org/35521>.
770 ;; Ensure the system libraries are used.
771 "-DWITH_JEMALLOC=yes"
776 "-DDEFAULT_CHARSET=utf8"
777 "-DDEFAULT_COLLATION=utf8_general_ci"
778 "-DMYSQL_DATADIR=/var/lib/mysql"
779 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
780 (string-append "-DCMAKE_INSTALL_PREFIX=" (assoc-ref %outputs "lib"))
781 (string-append "-DCMAKE_INSTALL_RPATH=" (assoc-ref %outputs "lib")
783 (string-append "-DINSTALL_INFODIR=" (assoc-ref %outputs "out")
785 (string-append "-DINSTALL_MANDIR=" (assoc-ref %outputs "out")
787 (string-append "-DINSTALL_SCRIPTDIR=" (assoc-ref %outputs "out") "/bin")
788 (string-append "-DINSTALL_BINDIR=" (assoc-ref %outputs "out") "/bin")
789 "-DCMAKE_INSTALL_LIBDIR=lib"
790 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
791 (string-append "-DINSTALL_INCLUDEDIR=" (assoc-ref %outputs "dev")
793 (string-append "-DINSTALL_DOCREADMEDIR=" (assoc-ref %outputs "out")
795 (string-append "-DINSTALL_DOCDIR=" (assoc-ref %outputs "out")
797 (string-append "-DINSTALL_SUPPORTFILESDIR=" (assoc-ref %outputs "out")
798 "/share/mysql/support-files")
799 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
800 "-DINSTALL_SHAREDIR=share")
802 (modify-phases %standard-phases
803 ,@(if (string-prefix? "arm" (%current-system))
804 ;; XXX: Because of the GCC 5 input, we need to hide GCC 7 from
805 ;; CPLUS_INCLUDE_PATH so that its headers do not shadow GCC 5.
806 '((add-after 'set-paths 'hide-default-gcc
807 (lambda* (#:key inputs #:allow-other-keys)
808 (let ((gcc (assoc-ref inputs "gcc")))
809 (setenv "CPLUS_INCLUDE_PATH"
811 (delete (string-append gcc "/include/c++")
812 (string-split (getenv "CPLUS_INCLUDE_PATH")
817 (add-after 'unpack 'fix-pcre-detection
819 ;; The bundled PCRE in MariaDB has a patch that was upstreamed
820 ;; in version 8.34. Unfortunately the upstream patch behaves
821 ;; slightly differently and the build system fails to detect it.
822 ;; See <https://bugs.exim.org/show_bug.cgi?id=2173>.
823 ;; XXX: Consider patching PCRE instead.
824 (substitute* "cmake/pcre.cmake"
825 ((" OR NOT PCRE_STACK_SIZE_OK") ""))
827 (add-after 'unpack 'adjust-tests
829 (let ((disabled-tests
830 '(;; These fail because root@hostname == root@localhost in
831 ;; the build environment, causing a user count mismatch.
832 ;; See <https://jira.mariadb.org/browse/MDEV-7761>.
834 "main.explain_non_select"
836 "main.stat_tables_innodb"
837 "roles.acl_statistics"
839 ;; This file contains a time bomb which makes it fail after
840 ;; 2030-12-31. See <https://bugs.gnu.org/34351> for details.
843 ;; FIXME: This test fails on i686:
844 ;; -myisampack: Can't create/write to file (Errcode: 17 "File exists")
845 ;; +myisampack: Can't create/write to file (Errcode: 17 "File exists)
846 ;; When running "myisampack --join=foo/t3 foo/t1 foo/t2"
847 ;; (all three tables must exist and be identical)
848 ;; in a loop it produces the same error around 1/240 times.
849 ;; montywi on #maria suggested removing the real_end check in
850 ;; "strings/my_vsnprintf.c" on line 503, yet it still does not
851 ;; reach the ending quote occasionally. Disable it for now.
853 ;; FIXME: This test fails on armhf-linux:
854 "mroonga/storage.index_read_multiple_double"))
856 ;; This file contains a list of known-flaky tests for this
857 ;; release. Append our own items.
858 (unstable-tests (open-file "mysql-test/unstable-tests" "a")))
859 (for-each (lambda (test)
860 (format unstable-tests "~a : ~a\n"
861 test "Disabled in Guix"))
863 (close-port unstable-tests)
865 ;; XXX: This test fails because it expects a latin1 charset and
866 ;; collation. See <https://jira.mariadb.org/browse/MDEV-21264>.
867 (substitute* "mysql-test/r/gis_notembedded.result"
868 (("latin1_swedish_ci") "utf8_general_ci")
869 (("\tlatin1") "\tutf8"))
871 (substitute* "mysql-test/suite/binlog/t/binlog_mysqlbinlog_stop_never.test"
875 (substitute* "mysql-test/mysql-test-run.pl"
876 (("/bin/ls") (which "ls"))
877 (("/bin/sh") (which "sh")))
879 (add-before 'configure 'disable-plugins
881 (let ((disable-plugin (lambda (name)
882 (call-with-output-file
883 (string-append "plugin/" name
886 (format port "\n")))))
887 (disabled-plugins '(;; XXX: Causes a test failure.
889 (for-each disable-plugin disabled-plugins)
892 (lambda* (#:key (tests? #t) #:allow-other-keys)
894 (with-directory-excursion "mysql-test"
895 (invoke "./mtr" "--verbose"
897 "--testcase-timeout=40"
898 "--suite-timeout=600"
899 "--parallel" (number->string (parallel-job-count))
900 "--skip-test-list=unstable-tests"))
901 (format #t "test suite not run~%"))
904 'install 'post-install
905 (lambda* (#:key inputs outputs #:allow-other-keys)
906 (let* ((out (assoc-ref outputs "out"))
907 (dev (assoc-ref outputs "dev"))
908 (lib (assoc-ref outputs "lib"))
909 (openssl (assoc-ref inputs "openssl")))
910 (substitute* (string-append out "/bin/mysql_install_db")
912 (string-append "basedir=\"" out "\"")))
913 ;; Remove unneeded files for testing.
914 (with-directory-excursion lib
915 (for-each delete-file-recursively
916 '("data" "mysql-test" "sql-bench"))
917 ;; And static libraries.
918 (for-each delete-file (find-files "lib" "\\.a$")))
919 (with-directory-excursion out
920 (delete-file "share/man/man1/mysql-test-run.pl.1")
921 ;; Delete huge and unnecessary executables.
922 (for-each delete-file (find-files "bin" "(test|embedded)")))
923 (mkdir-p (string-append dev "/share"))
924 (mkdir-p (string-append dev "/bin"))
925 (rename-file (string-append lib "/bin/mysqld")
926 (string-append out "/bin/mysqld"))
927 (rename-file (string-append lib "/share/pkgconfig")
928 (string-append dev "/share/pkgconfig"))
929 (rename-file (string-append out "/bin/mysql_config")
930 (string-append dev "/bin/mysql_config"))
933 (substitute* (string-append out "/bin/mysql_install_db")
934 (("\\$basedir/share/mysql")
935 (string-append lib "/share/mysql")))
937 ;; Embed an absolute reference to OpenSSL in mysql_config
938 ;; and the pkg-config file to avoid propagation.
939 (substitute* (list (string-append dev "/bin/mysql_config")
940 (string-append dev "/share/pkgconfig/mariadb.pc"))
941 (("-lssl -lcrypto" all)
942 (string-append "-L" openssl "/lib " all)))
947 ;; XXX: On armhf, use GCC 5 to work around <https://bugs.gnu.org/37605>.
948 ,@(if (string-prefix? "armhf" (%current-system))
953 `(("jemalloc" ,jemalloc)
957 ("openssl" ,openssl-1.0)
962 ;; The test suite is very resource intensive and can take more than three
963 ;; hours on a x86_64 system. Give slow and busy machines some leeway.
964 (properties '((timeout . 64800))) ;18 hours
965 (home-page "https://mariadb.org/")
966 (synopsis "SQL database server")
968 "MariaDB is a multi-user and multi-threaded SQL database server, designed
969 as a drop-in replacement of MySQL.")
970 (license license:gpl2)))
972 (define-public mariadb-connector-c
974 (name "mariadb-connector-c")
979 "https://downloads.mariadb.org/f/connector-c-"
980 version "/mariadb-connector-c-"
981 version "-src.tar.gz"))
984 "13v5z4w1cl890lnr2fbwbziw638lqw2aga45vdq1z0cyrc9mcgmg"))))
986 `(("openssl" ,openssl)))
987 (build-system cmake-build-system)
989 '(#:tests? #f)) ; no tests
990 (home-page "https://mariadb.com/kb/en/mariadb-connector-c/")
991 (synopsis "Client library to connect to MySQL or MariaDB")
992 (description "The MariaDB Connector/C is used to connect applications
993 developed in C/C++ to MariaDB and MySQL databases.")
994 (license license:lgpl2.1+)))
996 ;; Don't forget to update the other postgresql packages when upgrading this one.
997 (define-public postgresql
1003 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1004 version "/postgresql-" version ".tar.bz2"))
1007 "1qal0yp7a90yzya7hl56gsmw5fvacplrdhpn7h9gnbyr1i2iyw2d"))
1008 (patches (search-patches "postgresql-disable-resolve_symlinks.patch"))))
1009 (build-system gnu-build-system)
1011 `(#:configure-flags '("--with-uuid=e2fs" "--with-openssl")
1013 (modify-phases %standard-phases
1014 (add-before 'configure 'patch-/bin/sh
1016 ;; Refer to the actual shell.
1017 (substitute* '("src/bin/pg_ctl/pg_ctl.c"
1018 "src/bin/psql/command.c")
1019 (("/bin/sh") (which "sh")))
1021 (add-after 'build 'build-contrib
1023 (invoke "make" "-C" "contrib")))
1024 (add-after 'install 'install-contrib
1026 (invoke "make" "-C" "contrib" "install"))))))
1028 `(("readline" ,readline)
1029 ("libuuid" ,util-linux "lib")
1030 ("openssl" ,openssl)
1032 (home-page "https://www.postgresql.org/")
1033 (synopsis "Powerful object-relational database system")
1035 "PostgreSQL is a powerful object-relational database system. It is fully
1036 ACID compliant, has full support for foreign keys, joins, views, triggers, and
1037 stored procedures (in multiple languages). It includes most SQL:2008 data
1038 types, including INTEGER, NUMERIC, BOOLEAN, CHAR, VARCHAR, DATE, INTERVAL, and
1039 TIMESTAMP. It also supports storage of binary large objects, including
1040 pictures, sounds, or video.")
1041 (license (license:x11-style "file://COPYRIGHT"))))
1043 (define-public postgresql-10 postgresql)
1045 (define-public postgresql-11
1047 (inherit postgresql)
1052 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1053 version "/postgresql-" version ".tar.bz2"))
1056 "0w1iq488kpzfgfnlw4k32lz5by695mpnkq461jrgsr99z5zlz4j9"))))))
1058 (define-public postgresql-9.6
1060 (inherit postgresql)
1065 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1066 version "/postgresql-" version ".tar.bz2"))
1069 "1rr2dgv4ams8r2lp13w85c77rkmzpb88fjlc28mvlw6zq2fblv2w"))))))
1071 (define-public python-pymysql
1073 (name "python-pymysql")
1078 (uri (pypi-uri "PyMySQL" version))
1080 (base32 "1ry8lxgdc1p3k7gbw20r405jqi5lvhi5wk83kxdbiv8xv3f5kh6q"))))
1081 (build-system python-build-system)
1083 `(("python-unittest2" ,python-unittest2)))
1085 `(("python-cryptography" ,python-cryptography)))
1087 `(#:tests? #f)) ; tests expect a running MySQL
1088 (home-page "https://github.com/PyMySQL/PyMySQL/")
1089 (synopsis "Pure-Python MySQL driver")
1091 "PyMySQL is a pure-Python MySQL client library, based on PEP 249.
1092 Most public APIs are compatible with @command{mysqlclient} and MySQLdb.")
1093 (license license:expat)))
1095 (define-public python2-pymysql
1096 (package-with-python2 python-pymysql))
1105 (uri (string-append "http://fallabs.com/" name "/"
1106 name "-" version ".tar.gz"))
1109 "0gmpvhn02pkq280ffmn4da1g4mdr1xxz7l80b7y4n7km1mrzwrml"))))
1110 (build-system gnu-build-system)
1112 `(#:configure-flags (list (string-append "LDFLAGS=-Wl,-rpath="
1113 (assoc-ref %outputs "out")
1115 #:make-flags (list "CFLAGS=-fPIC")))
1116 (home-page "https://fallabs.com/qdbm/")
1117 (synopsis "Key-value database")
1118 (description "QDBM is a library of routines for managing a
1119 database. The database is a simple data file containing key-value
1120 pairs. Every key and value is serial bytes with variable length.
1121 Binary data as well as character strings can be used as a key or a
1122 value. There is no concept of data tables or data types. Records are
1123 organized in a hash table or B+ tree.")
1124 (license license:lgpl2.1+)))
1126 (define-public recutils
1132 (uri (string-append "mirror://gnu/recutils/recutils-"
1136 "14xiln4immfsw8isnvwvq0h23f6z0wilpgsc4qzabnrzb5lsx3nz"))))
1137 (build-system gnu-build-system)
1139 (arguments '(#:configure-flags
1140 (list (string-append "--with-bash-headers="
1141 (assoc-ref %build-inputs "bash:include")
1144 (native-inputs `(("bc" ,bc)
1145 ("bash:include" ,bash "include")
1147 ("libuuid" ,util-linux)
1148 ("pkg-config" ,pkg-config)))
1150 ;; TODO: Add more optional inputs.
1151 (inputs `(("curl" ,curl)
1152 ("libgcrypt" ,libgcrypt)))
1153 (synopsis "Manipulate plain text files as databases")
1155 "GNU Recutils is a set of tools and libraries for creating and
1156 manipulating text-based, human-editable databases. Despite being text-based,
1157 databases created with Recutils carry all of the expected features such as
1158 unique fields, primary keys, time stamps and more. Many different field
1159 types are supported, as is encryption.")
1160 (license license:gpl3+)
1161 (home-page "https://www.gnu.org/software/recutils/")))
1163 (define-public emacs-recutils
1166 (name "emacs-recutils")
1167 (build-system emacs-build-system)
1170 (modify-phases %standard-phases
1171 (add-after 'unpack 'change-directory
1177 (synopsis "Emacs mode for working with recutils database files")
1178 (description "This package provides an Emacs major mode @code{rec-mode}
1179 for working with GNU Recutils text-based, human-editable databases. It
1180 supports editing, navigation, and querying of recutils database files
1181 including field and record folding.")))
1183 (define-public rocksdb
1190 (url "https://github.com/facebook/rocksdb")
1191 (commit (string-append "v" version))))
1192 (file-name (git-file-name name version))
1195 "0n19p9cd13jg0lnibrzwkxs4xlrhyj3knypkd2ic41arbds0bdnl"))
1196 (modules '((guix build utils)))
1199 ;; TODO: unbundle gtest.
1200 (delete-file "build_tools/gnu_parallel")
1201 (substitute* "Makefile"
1202 (("build_tools/gnu_parallel") "parallel"))
1204 (build-system gnu-build-system)
1206 `(#:make-flags (list "CC=gcc" "V=1"
1207 ;; Ceph requires that RTTI is enabled.
1209 (string-append "INSTALL_PATH="
1210 (assoc-ref %outputs "out"))
1212 ;; Running the full test suite takes hours and require
1213 ;; a lot of disk space. Instead we only run a subset
1214 ;; (see .travis.yml and Makefile).
1215 "ROCKSDBTESTS_END=db_tailing_iter_test")
1216 #:test-target "check_some"
1217 ;; Many tests fail on 32-bit platforms. There are multiple reports about
1218 ;; this upstream, but it's not going to be supported any time soon.
1219 #:tests? (let ((system ,(or (%current-target-system)
1220 (%current-system))))
1221 (or (string-prefix? "x86_64-linux" system)
1222 (string-prefix? "aarch64-linux" system)))
1224 (modify-phases %standard-phases
1225 (add-after 'unpack 'patch-Makefile
1227 (substitute* "Makefile"
1228 ;; Don't depend on the static library when installing.
1229 (("install: install-static")
1230 "install: install-shared")
1231 (("#!/bin/sh") (string-append "#!" (which "sh"))))
1234 ;; The default target is only needed for tests and built on demand.
1236 (add-before 'check 'disable-optimizations
1238 ;; Prevent the build from passing '-march=native' to the compiler.
1239 (setenv "PORTABLE" "1")
1241 (add-before 'check 'disable-failing-tests
1243 (substitute* "Makefile"
1244 ;; These tests reliably fail due to "Too many open files".
1245 (("^[[:blank:]]+env_test[[:blank:]]+\\\\") "\\")
1246 (("^[[:blank:]]+persistent_cache_test[[:blank:]]+\\\\") "\\"))
1248 (add-after 'check 'build
1249 ;; The default build target is a debug build for tests. The
1250 ;; install target depends on the "shared_lib" release target
1251 ;; so we build it here for clarity.
1252 (lambda* (#:key (make-flags '()) parallel-build? #:allow-other-keys)
1253 (apply invoke "make" "shared_lib"
1254 `(,@(if parallel-build?
1255 `("-j" ,(number->string (parallel-job-count)))
1259 `(("parallel" ,parallel)
1262 ("python" ,python-2)
1267 ("jemalloc" ,jemalloc)
1271 (home-page "https://rocksdb.org/")
1272 (synopsis "Persistent key-value store for fast storage")
1274 "RocksDB is a library that forms the core building block for a fast
1275 key-value server, especially suited for storing data on flash drives. It
1276 has a @dfn{Log-Structured-Merge-Database} (LSM) design with flexible tradeoffs
1277 between @dfn{Write-Amplification-Factor} (WAF), @dfn{Read-Amplification-Factor}
1278 (RAF) and @dfn{Space-Amplification-Factor} (SAF). It has multi-threaded
1279 compactions, making it specially suitable for storing multiple terabytes of
1280 data in a single database. RocksDB is partially based on @code{LevelDB}.")
1281 ;; RocksDB is dual licensed under GPL2 and ASL 2.0. Some header
1282 ;; files carry the 3-clause BSD license.
1283 (license (list license:gpl2 license:asl2.0 license:bsd-3))))
1285 (define-public sparql-query
1287 (name "sparql-query")
1292 (url "https://github.com/tialaramex/sparql-query")
1295 (base32 "0a84a89idpjhj9w2y3fmvzv7ldps1cva1kxvfmh897k02kaniwxk"))
1296 (file-name (git-file-name name version))))
1297 (build-system gnu-build-system)
1301 ("libxml2" ,libxml2)
1302 ("ncurses" ,ncurses)
1303 ("readline" ,readline)))
1305 `(("pkg-config" ,pkg-config)))
1307 `(#:make-flags '("CC=gcc")
1309 (modify-phases %standard-phases
1311 ;; The Makefile uses git to obtain versioning information. This phase
1312 ;; substitutes the git invocation with the package version.
1313 (add-after 'unpack 'remove-git-dependency
1315 (substitute* "Makefile"
1317 (string-append "gitrev = \"v" ,version "\"")))
1319 ;; The install phase of the Makefile assumes $PREFIX/usr/local/bin.
1320 ;; This replacement does the same thing, except for using $PREFIX/bin
1323 (lambda* (#:key outputs #:allow-other-keys)
1324 (let* ((out (assoc-ref outputs "out"))
1325 (bin (string-append out "/bin")))
1326 (install-file "sparql-query" bin)
1327 (symlink (string-append bin "/sparql-query")
1328 (string-append bin "/sparql-update")))
1331 (lambda* (#:key make-flags #:allow-other-keys)
1332 (apply invoke "make" `(,@make-flags "scan-test"))
1333 (invoke "./scan-test"))))))
1334 (home-page "https://github.com/tialaramex/sparql-query/")
1335 (synopsis "Command-line tool for accessing SPARQL endpoints over HTTP")
1336 (description "Sparql-query is a command-line tool for accessing SPARQL
1337 endpoints over HTTP. It has been intentionally designed to @code{feel} similar to
1338 tools for interrogating SQL databases. For example, you can enter a query over
1339 several lines, using a semi-colon at the end of a line to indicate the end of
1340 your query. It also supports readline so that you can more easily recall and
1341 edit previous queries, even across sessions. It can be used non-interactively,
1342 for example from a shell script.")
1343 ;; Some files (like scan-sparql.c) contain a GPLv3+ license header, while
1344 ;; others (like sparql-query.c) contain a GPLv2+ license header.
1345 (license (list license:gpl3+))))
1347 (define-public sqitch
1355 "mirror://cpan/authors/id/D/DW/DWHEELER/App-Sqitch-v"
1358 (base32 "1ayiwg9kh3w0nbacbcln7h944z94vq5vnnd5diz86033bpbnq57f"))))
1359 (build-system perl-build-system)
1362 (modify-phases %standard-phases
1363 (add-before 'check 'set-check-environment
1366 (setenv "HOME" "/tmp")
1368 (add-after 'install 'wrap-program
1369 (lambda* (#:key outputs #:allow-other-keys)
1370 (let* ((out (assoc-ref outputs "out"))
1371 (path (getenv "PERL5LIB")))
1372 (wrap-program (string-append out "/bin/sqitch")
1373 `("PERL5LIB" ":" prefix
1374 (,(string-append out "/lib/perl5/site_perl"
1379 `(("perl-capture-tiny" ,perl-capture-tiny)
1380 ("perl-io-pager" ,perl-io-pager)
1381 ("perl-module-build" ,perl-module-build)
1382 ("perl-module-runtime" ,perl-module-runtime)
1383 ("perl-path-class" ,perl-path-class)
1384 ("perl-test-deep" ,perl-test-deep)
1385 ("perl-test-dir" ,perl-test-dir)
1386 ("perl-test-exception" ,perl-test-exception)
1387 ("perl-test-file" ,perl-test-file)
1388 ("perl-test-file-contents" ,perl-test-file-contents)
1389 ("perl-test-mockmodule" ,perl-test-mockmodule)
1390 ("perl-test-mockobject" ,perl-test-mockobject)
1391 ("perl-test-nowarnings" ,perl-test-nowarnings)
1392 ("perl-test-warn" ,perl-test-warn)))
1394 `(("perl-class-xsaccessor" ,perl-class-xsaccessor)
1395 ("perl-clone" ,perl-clone)
1396 ("perl-config-gitlike" ,perl-config-gitlike)
1397 ("perl-datetime" ,perl-datetime)
1398 ("perl-datetime-timezone" ,perl-datetime-timezone)
1399 ("perl-dbd-mysql" ,perl-dbd-mysql)
1400 ("perl-dbd-pg" ,perl-dbd-pg)
1401 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1402 ("perl-dbi" ,perl-dbi)
1403 ("perl-devel-stacktrace" ,perl-devel-stacktrace)
1404 ("perl-encode-locale" ,perl-encode-locale)
1405 ("perl-hash-merge" ,perl-hash-merge)
1406 ("perl-ipc-run3" ,perl-ipc-run3)
1407 ("perl-ipc-system-simple" ,perl-ipc-system-simple)
1408 ("perl-libintl-perl" ,perl-libintl-perl)
1409 ("perl-list-moreutils" ,perl-list-moreutils)
1410 ("perl-moo" ,perl-moo)
1411 ("perl-mysql-config" ,perl-mysql-config)
1412 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
1413 ("perl-path-class" ,perl-path-class)
1414 ("perl-perlio-utf8_strict" ,perl-perlio-utf8_strict)
1415 ("perl-string-formatter" ,perl-string-formatter)
1416 ("perl-string-shellquote" ,perl-string-shellquote)
1417 ("perl-sub-exporter" ,perl-sub-exporter)
1418 ("perl-template-tiny" ,perl-template-tiny)
1419 ("perl-template-toolkit" ,perl-template-toolkit)
1420 ("perl-throwable" ,perl-throwable)
1421 ("perl-try-tiny" ,perl-try-tiny)
1422 ("perl-type-tiny" ,perl-type-tiny)
1423 ("perl-type-tiny-xs" ,perl-type-tiny-xs)
1424 ("perl-uri" ,perl-uri)
1425 ("perl-uri-db" ,perl-uri-db)))
1426 (home-page "https://sqitch.org/")
1427 (synopsis "Database change management tool")
1429 "Sqitch is a standalone change management system for database schemas,
1430 which uses SQL to describe changes.")
1431 (license license:x11)))
1433 (define-public sqlcrush
1434 ;; Unfortunately, there is no proper upstream release and may never be.
1435 (let ((commit "b5f6868f189566a26eecc78d0f0659813c1aa98a")
1439 (version (git-version "0.1.5" revision commit))
1443 (url "https://github.com/coffeeandscripts/sqlcrush")
1445 (file-name (git-file-name name version))
1448 "0x3wy40r93p0jv3nbwj9a77wa4ff697d13r0wffmm7q9h3mzsww8"))))
1449 (build-system python-build-system)
1451 `(("python-cryptography" ,python-cryptography)
1452 ("python-psycopg2" ,python-psycopg2)
1453 ("python-pymysql" ,python-pymysql)
1454 ("python-sqlalchemy" ,python-sqlalchemy)))
1455 (home-page "https://github.com/coffeeandscripts/sqlcrush")
1456 (synopsis "Text console-based database viewer and editor")
1458 "SQLcrush lets you view and edit a database directly from the text
1459 console through an ncurses interface. You can explore each table's structure,
1460 browse and edit the contents, add and delete entries, all while tracking your
1462 (license license:gpl3+)))) ; no headers, see README.md
1470 (uri (string-append "https://www.samba.org/ftp/tdb/tdb-"
1474 "06waz0k50c7v3chd08mzp2rv7w4k4q9isbxx3vhlfpx1vy9q61f8"))))
1475 (build-system gnu-build-system)
1478 (modify-phases %standard-phases
1480 (lambda* (#:key outputs #:allow-other-keys)
1481 (let ((out (assoc-ref outputs "out")))
1482 ;; The 'configure' script is a wrapper for Waf and
1483 ;; doesn't recognize things like '--enable-fast-install'.
1484 (invoke "./configure"
1485 (string-append "--prefix=" out))))))))
1487 `(;; TODO: Build the documentation.
1488 ;; ("docbook-xsl" ,docbook-xsl)
1489 ;; ("libxml2" ,libxml2)
1490 ;; ("libxslt" ,libxslt)
1491 ("python" ,python) ;for the Waf build system
1493 (home-page "https://tdb.samba.org/")
1494 (synopsis "Trivial database")
1496 "TDB is a Trivial Database. In concept, it is very much like GDBM,
1497 and BSD's DB except that it allows multiple simultaneous writers and uses
1498 locking internally to keep writers from trampling on each other. TDB is also
1500 (license license:lgpl3+)))
1502 (define-public perl-dbi
1509 "mirror://cpan/authors/id/T/TI/TIMB/DBI-"
1513 "1yinx39960y241vf2sknxj0dfz82a5m9gvklq5rw78k0nlyrjawa"))))
1514 (build-system perl-build-system)
1515 (synopsis "Database independent interface for Perl")
1516 (description "This package provides an database interface for Perl.")
1517 (home-page "https://metacpan.org/release/DBI")
1518 (license license:perl-license)))
1520 (define-public perl-dbix-class
1522 (name "perl-dbix-class")
1523 (version "0.082842")
1527 (uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
1528 "DBIx-Class-" version ".tar.gz"))
1530 (base32 "1rh7idjjbibc1zmiaaarask434lh0lx7f2xyfwmy37k9fa0xcpmh"))))
1531 (build-system perl-build-system)
1533 `(("perl-dbd-sqlite" ,perl-dbd-sqlite)
1534 ("perl-file-temp" ,perl-file-temp)
1535 ("perl-module-install" ,perl-module-install)
1536 ("perl-package-stash" ,perl-package-stash)
1537 ("perl-test-deep" ,perl-test-deep)
1538 ("perl-test-exception" ,perl-test-exception)
1539 ("perl-test-warn" ,perl-test-warn)))
1541 `(("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
1542 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
1543 ("perl-class-inspector" ,perl-class-inspector)
1544 ("perl-config-any" ,perl-config-any)
1545 ("perl-context-preserve" ,perl-context-preserve)
1546 ("perl-data-dumper-concise" ,perl-data-dumper-concise)
1547 ("perl-data-page" ,perl-data-page)
1548 ("perl-dbi" ,perl-dbi)
1549 ("perl-devel-globaldestruction" ,perl-devel-globaldestruction)
1550 ("perl-hash-merge" ,perl-hash-merge)
1551 ("perl-module-find" ,perl-module-find)
1552 ("perl-moo" ,perl-moo)
1553 ("perl-mro-compat" ,perl-mro-compat)
1554 ("perl-namespace-clean" ,perl-namespace-clean)
1555 ("perl-path-class" ,perl-path-class)
1556 ("perl-scalar-list-utils" ,perl-scalar-list-utils)
1557 ("perl-scope-guard" ,perl-scope-guard)
1558 ("perl-sql-abstract-classic" ,perl-sql-abstract-classic)
1559 ("perl-sub-name" ,perl-sub-name)
1560 ("perl-text-balanced" ,perl-text-balanced)
1561 ("perl-try-tiny" ,perl-try-tiny)))
1562 (home-page "https://metacpan.org/release/DBIx-Class")
1563 (synopsis "Extensible and flexible object <-> relational mapper")
1564 (description "An SQL to OO mapper with an object API inspired by
1565 Class::DBI (with a compatibility layer as a springboard for porting) and a
1566 resultset API that allows abstract encapsulation of database operations. It
1567 aims to make representing queries in your code as perl-ish as possible while
1568 still providing access to as many of the capabilities of the database as
1569 possible, including retrieving related records from multiple tables in a
1570 single query, \"JOIN\", \"LEFT JOIN\", \"COUNT\", \"DISTINCT\", \"GROUP BY\",
1571 \"ORDER BY\" and \"HAVING\" support.")
1572 (license license:perl-license)))
1574 (define-public perl-dbix-class-cursor-cached
1576 (name "perl-dbix-class-cursor-cached")
1577 (version "1.001004")
1581 (uri (string-append "mirror://cpan/authors/id/A/AR/ARCANEZ/"
1582 "DBIx-Class-Cursor-Cached-" version ".tar.gz"))
1585 "09b2jahn2x12qm4f7qm1jzsxbz7qn1czp6a3fnl5l2i3l4r5421p"))))
1586 (build-system perl-build-system)
1588 `(("perl-cache-cache" ,perl-cache-cache)
1589 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1590 ("perl-module-install" ,perl-module-install)))
1592 `(("perl-carp-clan" ,perl-carp-clan)
1593 ("perl-dbix-class" ,perl-dbix-class)))
1594 (home-page "https://metacpan.org/release/DBIx-Class-Cursor-Cached")
1595 (synopsis "Cursor with built-in caching support")
1596 (description "DBIx::Class::Cursor::Cached provides a cursor class with
1597 built-in caching support.")
1598 (license license:perl-license)))
1600 (define-public perl-dbix-class-introspectablem2m
1602 (name "perl-dbix-class-introspectablem2m")
1603 (version "0.001002")
1607 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
1608 "DBIx-Class-IntrospectableM2M-" version ".tar.gz"))
1611 "1w47rh2241iy5x3a9bqsyd5kdp9sk43dksr99frzv4qn4jsazfn6"))))
1612 (build-system perl-build-system)
1614 `(("perl-module-install" ,perl-module-install)))
1616 `(("perl-dbix-class" ,perl-dbix-class)))
1617 (home-page "https://metacpan.org/release/DBIx-Class-IntrospectableM2M")
1618 (synopsis "Introspect many-to-many relationships")
1619 (description "Because the many-to-many relationships are not real
1620 relationships, they can not be introspected with DBIx::Class. Many-to-many
1621 relationships are actually just a collection of convenience methods installed
1622 to bridge two relationships. This DBIx::Class component can be used to store
1623 all relevant information about these non-relationships so they can later be
1624 introspected and examined.")
1625 (license license:perl-license)))
1627 (define-public perl-dbix-class-schema-loader
1629 (name "perl-dbix-class-schema-loader")
1634 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
1635 "DBIx-Class-Schema-Loader-" version ".tar.gz"))
1638 "0r57fv71ypxafb85cpxph1hdqii7ipjwvc19yb6fpkvq2ggcssg8"))))
1639 (build-system perl-build-system)
1641 `(("perl-config-any" ,perl-config-any)
1642 ("perl-config-general" ,perl-config-general)
1643 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1644 ("perl-dbix-class-introspectablem2m" ,perl-dbix-class-introspectablem2m)
1645 ("perl-module-install" ,perl-module-install)
1646 ("perl-moose" ,perl-moose)
1647 ("perl-moosex-markasmethods" ,perl-moosex-markasmethods)
1648 ("perl-moosex-nonmoose" ,perl-moosex-nonmoose)
1649 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
1650 ("perl-test-deep" ,perl-test-deep)
1651 ("perl-test-differences" ,perl-test-differences)
1652 ("perl-test-exception" ,perl-test-exception)
1653 ("perl-test-pod" ,perl-test-pod)
1654 ("perl-test-warn" ,perl-test-warn)))
1656 `(("perl-class-unload" ,perl-class-unload)
1657 ("perl-class-inspector" ,perl-class-inspector)
1658 ("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
1659 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
1660 ("perl-carp-clan" ,perl-carp-clan)
1661 ("perl-data-dump" ,perl-data-dump)
1662 ("perl-dbix-class" ,perl-dbix-class)
1663 ("perl-hash-merge" ,perl-hash-merge)
1664 ("perl-list-moreutils" ,perl-list-moreutils)
1665 ("perl-lingua-en-inflect-phrase" ,perl-lingua-en-inflect-phrase)
1666 ("perl-lingua-en-inflect-number" ,perl-lingua-en-inflect-number)
1667 ("perl-lingua-en-tagger" ,perl-lingua-en-tagger)
1668 ("perl-namespace-clean" ,perl-namespace-clean)
1669 ("perl-mro-compat" ,perl-mro-compat)
1670 ("perl-scope-guard" ,perl-scope-guard)
1671 ("perl-string-camelcase" ,perl-string-camelcase)
1672 ("perl-string-toidentifier-en" ,perl-string-toidentifier-en)
1673 ("perl-sub-name" ,perl-sub-name)
1674 ("perl-try-tiny" ,perl-try-tiny)))
1675 (arguments `(#:tests? #f)) ;TODO: t/20invocations.t fails
1676 (home-page "https://metacpan.org/release/DBIx-Class-Schema-Loader")
1677 (synopsis "Create a DBIx::Class::Schema based on a database")
1678 (description "DBIx::Class::Schema::Loader automates the definition of a
1679 DBIx::Class::Schema by scanning database table definitions and setting up the
1680 columns, primary keys, unique constraints and relationships.")
1681 (license license:perl-license)))
1683 (define-public perl-dbd-pg
1685 (name "perl-dbd-pg")
1690 (uri (string-append "mirror://cpan/authors/id/T/TU/TURNSTEP/"
1691 "DBD-Pg-" version ".tar.gz"))
1694 "0gkqlvbmzbdm0g4k328nlkjdg3wrjm5i2n9jxj1i8sqxkm79rylz"))))
1695 (build-system perl-build-system)
1697 `(("perl-dbi" ,perl-dbi)))
1699 `(("perl-dbi" ,perl-dbi)
1700 ("postgresql" ,postgresql)))
1701 (home-page "https://metacpan.org/release/DBD-Pg")
1702 (synopsis "DBI PostgreSQL interface")
1703 (description "This package provides a PostgreSQL driver for the Perl5
1704 @dfn{Database Interface} (DBI).")
1705 (license license:perl-license)))
1707 (define-public perl-dbd-mysql
1709 (name "perl-dbd-mysql")
1714 (uri (string-append "mirror://cpan/authors/id/D/DV/DVEEDEN/"
1715 "DBD-mysql-" version ".tar.gz"))
1717 (base32 "0y4djb048i09dk19av7mzfb3khr72vw11p3ayw2p82jsy4gm8j2g"))))
1718 (build-system perl-build-system)
1721 (modify-phases %standard-phases
1722 (add-before 'configure 'skip-library-detection
1723 ;; Avoid depencies on perl-devel-checklib, openssl, and zlib. They
1724 ;; are really only needed for the test suite; their absence does not
1725 ;; affect the build or the end result.
1727 (substitute* "Makefile.PL"
1728 (("use Devel::CheckLib;" match)
1729 (string-append "# " match))
1733 ;; Tests require running MySQL server.
1736 `(("perl-dbi" ,perl-dbi)
1737 ("mysql" ,mariadb "lib")
1738 ("mysql-dev" ,mariadb "dev")))
1739 (home-page "https://metacpan.org/release/DBD-mysql")
1740 (synopsis "DBI MySQL interface")
1741 (description "This package provides a MySQL driver for the Perl5
1742 @dfn{Database Interface} (DBI).")
1743 (license license:perl-license)))
1745 (define-public perl-dbd-sqlite
1747 (name "perl-dbd-sqlite")
1752 "mirror://cpan/authors/id/I/IS/ISHIGAKI/DBD-SQLite-"
1756 "1zljln5nh61gj3k22a1fv2vhx5l83waizmarwkh77hk6kzzmvrw9"))))
1757 (build-system perl-build-system)
1758 (inputs `(("sqlite" ,sqlite)))
1759 (propagated-inputs `(("perl-dbi" ,perl-dbi)))
1760 (synopsis "SQlite interface for Perl")
1761 (description "DBD::SQLite is a Perl DBI driver for SQLite, that includes
1762 the entire thing in the distribution. So in order to get a fast transaction
1763 capable RDBMS working for your Perl project you simply have to install this
1764 module, and nothing else.")
1765 (license license:perl-license)
1766 (home-page "https://metacpan.org/release/DBD-SQLite")))
1768 (define-public perl-mysql-config
1770 (name "perl-mysql-config")
1776 "mirror://cpan/authors/id/D/DA/DARREN/MySQL-Config-"
1781 "1svn7ccw2gc4cazvc58j84rxhnc9vs01zpird0l8460598j475qr"))))
1782 (build-system perl-build-system)
1783 (home-page "https://metacpan.org/release/MySQL-Config")
1784 (synopsis "Parse and utilize MySQL's /etc/my.cnf and ~/.my.cnf files")
1786 "@code{MySQL::Config} emulates the @code{load_defaults} function from
1787 libmysqlclient. It will fill an array with long options, ready to be parsed by
1788 @code{Getopt::Long}.")
1789 (license license:perl-license)))
1791 (define-public perl-sql-abstract
1793 (name "perl-sql-abstract")
1798 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
1799 "SQL-Abstract-" version ".tar.gz"))
1801 (base32 "0jhw91b23wc9bkfwcgvka4x5ddxk58m9bcp5ay7a3vx77nla09p9"))))
1802 (build-system perl-build-system)
1804 `(("perl-module-install" ,perl-module-install)
1805 ("perl-test-deep" ,perl-test-deep)
1806 ("perl-test-exception" ,perl-test-exception)
1807 ("perl-test-warn" ,perl-test-warn)))
1809 `(("perl-hash-merge" ,perl-hash-merge)
1810 ("perl-moo" ,perl-moo)
1811 ("perl-mro-compat" ,perl-mro-compat)
1812 ("perl-text-balanced" ,perl-text-balanced)))
1813 (home-page "https://metacpan.org/release/SQL-Abstract")
1814 (synopsis "Generate SQL from Perl data structures")
1815 (description "This module was inspired by the excellent DBIx::Abstract.
1816 While based on the concepts used by DBIx::Abstract, the concepts used have
1817 been modified to make the SQL easier to generate from Perl data structures.
1818 The underlying idea is for this module to do what you mean, based on the data
1819 structures you provide it, so that you don't have to modify your code every
1820 time your data changes.")
1821 (license license:perl-license)))
1823 (define-public perl-sql-abstract-classic
1825 (name "perl-sql-abstract-classic")
1830 (uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
1831 "SQL-Abstract-Classic-" version ".tar.gz"))
1833 (base32 "0a7g13hs3kdxrjn43sfli09mgsi9d6w0dfw6hlk268av17yisgaf"))))
1834 (build-system perl-build-system)
1836 `(("perl-test-deep" ,perl-test-deep)
1837 ("perl-test-exception" ,perl-test-exception)
1838 ("perl-test-warn" ,perl-test-warn)))
1840 `(("perl-mro-compat" ,perl-mro-compat)
1841 ("perl-sql-abstract" ,perl-sql-abstract)))
1842 (home-page "https://metacpan.org/release/SQL-Abstract-Classic")
1843 (synopsis "Generate SQL from Perl data structures")
1845 "This module is nearly identical to @code{SQL::Abstract} 1.81, and exists
1846 to preserve the ability of users to opt into the new way of doing things in
1847 later versions according to their own schedules.
1849 It is an abstract SQL generation module based on the concepts used by
1850 @code{DBIx::Abstract}, with several important differences, especially when it
1851 comes to @code{WHERE} clauses. These concepts were modified to make the SQL
1852 easier to generate from Perl data structures.
1854 The underlying idea is for this module to do what you mean, based on the data
1855 structures you provide it. You shouldn't have to modify your code every time
1856 your data changes, as this module figures it out.")
1857 (license license:perl-license)))
1859 (define-public perl-sql-splitstatement
1861 (name "perl-sql-splitstatement")
1866 (uri (string-append "mirror://cpan/authors/id/E/EM/EMAZEP/"
1867 "SQL-SplitStatement-" version ".tar.gz"))
1870 "0bqg45k4c9qkb2ypynlwhpvzsl4ssfagmsalys18s5c79ps30z7p"))))
1871 (build-system perl-build-system)
1873 `(("perl-test-exception" ,perl-test-exception)))
1875 `(("perl-class-accessor" ,perl-class-accessor)
1876 ("perl-list-moreutils" ,perl-list-moreutils)
1877 ("perl-regexp-common" ,perl-regexp-common)
1878 ("perl-sql-tokenizer" ,perl-sql-tokenizer)))
1879 (home-page "https://metacpan.org/release/SQL-SplitStatement")
1880 (synopsis "Split SQL code into atomic statements")
1881 (description "This module tries to split any SQL code, even including
1882 non-standard extensions, into the atomic statements it is composed of.")
1883 (license license:perl-license)))
1885 (define-public perl-sql-tokenizer
1887 (name "perl-sql-tokenizer")
1892 (uri (string-append "mirror://cpan/authors/id/I/IZ/IZUT/"
1893 "SQL-Tokenizer-" version ".tar.gz"))
1896 "1qa2dfbzdlr5qqdam9yn78z5w3al5r8577x06qan8wv58ay6ka7s"))))
1897 (build-system perl-build-system)
1898 (home-page "https://metacpan.org/release/SQL-Tokenizer")
1899 (synopsis "SQL tokenizer")
1900 (description "SQL::Tokenizer is a tokenizer for SQL queries. It does not
1901 claim to be a parser or query verifier. It just creates sane tokens from a
1903 (license license:perl-license)))
1905 (define-public unixodbc
1913 "ftp://ftp.unixodbc.org/pub/unixODBC/unixODBC-"
1916 (base32 "0xry3sg497wly8f7715a7gwkn2k36bcap0mvzjw74jj53yx6kwa5"))))
1917 (build-system gnu-build-system)
1918 (synopsis "Data source abstraction library")
1919 (description "Unixodbc is a library providing an API with which to access
1920 data sources. Data sources include SQL Servers and any software with an ODBC
1922 (license license:lgpl2.1+)
1923 ;; COPYING contains copy of lgpl2.1 - but copyright notices just say "LGPL"
1924 (home-page "http://www.unixodbc.org")))
1926 (define-public unqlite
1932 ;; Contains bug fixes against the official release, and has an
1933 ;; autotooled build system.
1934 (uri (string-append "https://github.com/aidin36/tocc/releases/"
1936 "unqlite-unofficial-" version ".tar.gz"))
1939 "1sbpvhg15gadq0mpcy16q7k3rkg4b4dicpnn5xifpkpn02sqik3s"))))
1940 (build-system gnu-build-system)
1941 (arguments `(#:tests? #f)) ;No check target
1942 (home-page "https://www.unqlite.org")
1943 (synopsis "In-memory key/value and document store")
1945 "UnQLite is an in-process software library which implements a
1946 self-contained, serverless, zero-configuration, transactional NoSQL
1947 database engine. UnQLite is a document store database similar to
1948 MongoDB, Redis, CouchDB, etc. as well as a standard Key/Value store
1949 similar to BerkeleyDB, LevelDB, etc.")
1950 (license license:bsd-2)))
1952 (define-public redis
1958 (uri (string-append "http://download.redis.io/releases/redis-"
1962 "0ax8sf3vw0yadr41kzc04917scrg5wir1d94zmbz00b8pzm79nv1"))))
1963 (build-system gnu-build-system)
1965 '(#:tests? #f ; tests related to master/slave and replication fail
1966 #:phases (modify-phases %standard-phases
1967 (delete 'configure))
1968 #:make-flags `("CC=gcc"
1971 ,(string-append "PREFIX="
1972 (assoc-ref %outputs "out")))))
1973 (synopsis "Key-value cache and store")
1974 (description "Redis is an advanced key-value cache and store. Redis
1975 supports many data structures including strings, hashes, lists, sets, sorted
1976 sets, bitmaps and hyperloglogs.")
1977 (home-page "https://redis.io/")
1978 (license license:bsd-3)))
1980 (define-public kyotocabinet
1982 (name "kyotocabinet")
1986 (uri (string-append "https://fallabs.com/kyotocabinet/pkg/"
1987 "kyotocabinet-" version ".tar.gz"))
1990 "1bxkf9kmcavq9rqridb8mvmrk3hj4447ffi24m2admsbm61n6k29"))))
1991 (build-system gnu-build-system)
1995 "--disable-opt" ;"-march=native". XXX this also turns off -O0.
1996 (string-append "LDFLAGS=-Wl,-rpath="
1997 (assoc-ref %outputs "out") "/lib"))))
1998 (inputs `(("zlib" ,zlib)))
1999 (home-page "https://fallabs.com/kyotocabinet/")
2001 "Kyoto Cabinet is a modern implementation of the DBM database")
2003 "Kyoto Cabinet is a standalone file-based database that supports Hash
2004 and B+ Tree data storage models. It is a fast key-value lightweight
2005 database and supports many programming languages. It is a NoSQL database.")
2006 (license license:gpl3+)))
2008 (define-public tokyocabinet
2010 (name "tokyocabinet")
2015 (uri (string-append "http://fallabs.com/tokyocabinet/"
2016 name "-" version ".tar.gz"))
2019 "140zvr0n8kvsl0fbn2qn3f2kh3yynfwnizn4dgbj47m975yg80x0"))))
2020 (build-system gnu-build-system)
2023 (list "--enable-pthread" "--enable-off64" "--enable-fastest"
2024 (string-append "LDFLAGS=-Wl,-rpath="
2025 (assoc-ref %outputs "out") "/lib"))))
2028 (home-page "http://fallabs.com/tokyocabinet/")
2029 (synopsis "Tokyo Cabinet is a modern implementation of the DBM database")
2031 "Tokyo Cabinet is a library of routines for managing a database.
2032 The database is a simple data file containing records, each is a pair of a
2033 key and a value. Every key and value is serial bytes with variable length.
2034 Both binary data and character string can be used as a key and a value.
2035 There is neither concept of data tables nor data types. Records are
2036 organized in hash table, B+ tree, or fixed-length array.")
2037 (license license:lgpl2.1+)))
2039 (define-public wiredtiger
2046 "http://source.wiredtiger.com/releases/wiredtiger-"
2047 version ".tar.bz2"))
2050 "0krwnb2zfbhvjaskwl875qzd3y626s84zcciq2mxr5c5riw3yh6s"))))
2051 (build-system gnu-build-system)
2053 '(#:configure-flags '("--enable-lz4" "--with-builtins=snappy,zlib")
2055 (modify-phases %standard-phases
2056 (add-before 'check 'disable-test/fops
2058 ;; XXX: timed out after 3600 seconds of silence
2059 (substitute* "Makefile"
2065 ("snappy" ,snappy)))
2066 (home-page "http://source.wiredtiger.com/")
2067 (synopsis "NoSQL data engine")
2069 "WiredTiger is an extensible platform for data management. It supports
2070 row-oriented storage (where all columns of a row are stored together),
2071 column-oriented storage (where columns are stored in groups, allowing for
2072 more efficient access and storage of column subsets) and log-structured merge
2073 trees (LSM), for sustained throughput under random insert workloads.")
2074 (license license:gpl3) ; or GPL-2
2075 ;; configure.ac: WiredTiger requires a 64-bit build.
2076 (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))))
2078 (define-public wiredtiger-3
2080 (inherit wiredtiger)
2085 (uri (string-append "http://source.wiredtiger.com/releases/wiredtiger-"
2086 version ".tar.bz2"))
2089 "014awypv579ascg4jbx4pndj2wld337m79yyzrzyr7hxrff139jx"))))))
2091 (define-public guile-wiredtiger
2093 (name "guile-wiredtiger")
2098 (url "https://framagit.org/a-guile-mind/guile-wiredtiger.git")
2099 (commit "340ad4bc2ff4dcc6216a2f5c6f9172ca320ac66b")))
2100 (file-name (string-append name "-" version "-checkout"))
2103 "15j36bvxxzil7qpwlmh1rffqpva3ynvrcpqhhqbj2c9208ayz595"))))
2104 (build-system gnu-build-system)
2106 '(#:parallel-tests? #f ;; tests can't be run in parallel, yet.
2108 (list (string-append "--with-libwiredtiger-prefix="
2109 (assoc-ref %build-inputs "wiredtiger")))
2110 #:make-flags '("GUILE_AUTO_COMPILE=0")))
2112 `(("autoconf" ,autoconf)
2113 ("automake" ,automake)
2114 ("pkg-config" ,pkg-config)))
2116 `(("wiredtiger" ,wiredtiger-3)
2117 ("guile" ,guile-2.2)))
2119 `(("guile-bytestructures" ,guile-bytestructures)))
2120 (synopsis "WiredTiger bindings for GNU Guile")
2122 "This package provides Guile bindings to the WiredTiger ``NoSQL''
2124 (home-page "https://framagit.org/a-guile-mind/guile-wiredtiger")
2125 (license license:gpl3+)))
2127 (define-public perl-db-file
2129 (name "perl-db-file")
2134 (uri (string-append "mirror://cpan/authors/id/P/PM/PMQS/DB_File-"
2137 (base32 "0q599h7g4jkzks5dxf1zifx9k7l9vif26r2dlgkzxkg6bfif5zyr"))))
2138 (build-system perl-build-system)
2139 (inputs `(("bdb" ,bdb)))
2140 (native-inputs `(("perl-test-pod" ,perl-test-pod)))
2142 `(#:phases (modify-phases %standard-phases
2144 'configure 'modify-config.in
2145 (lambda* (#:key inputs #:allow-other-keys)
2146 (substitute* "config.in"
2147 (("/usr/local/BerkeleyDB") (assoc-ref inputs "bdb")))
2149 (home-page "https://metacpan.org/release/DB_File")
2150 (synopsis "Perl5 access to Berkeley DB version 1.x")
2152 "The DB::File module provides Perl bindings to the Berkeley DB version 1.x.")
2153 (license license:perl-license)))
2163 (url "https://git.openldap.org/openldap/openldap.git")
2164 (commit (string-append "LMDB_" version))))
2165 (file-name (git-file-name name version))
2167 (base32 "0323xwb2rqyrr9vr6gbxc2kl89drhqw0ifmyh9pg9qgqmymyhxdx"))))
2168 (build-system gnu-build-system)
2170 `(#:test-target "test"
2172 (modify-phases %standard-phases
2174 (lambda* (#:key outputs #:allow-other-keys)
2175 (chdir "libraries/liblmdb")
2176 (substitute* "Makefile"
2177 (("/usr/local") (assoc-ref outputs "out")))
2179 (home-page "https://symas.com/lmdb/")
2180 (synopsis "Lightning Memory-Mapped Database library")
2182 "The @dfn{Lightning Memory-Mapped Database} (LMDB) is a high-performance
2183 transactional database. Unlike more complex relational databases, LMDB handles
2184 only key-value pairs (stored as arbitrary byte arrays) and relies on the
2185 underlying operating system for caching and locking, keeping the code small and
2187 The use of ‘zero-copy’ memory-mapped files combines the persistence of classic
2188 disk-based databases with high read performance that scales linearly over
2189 multiple cores. The size of each database is limited only by the size of the
2190 virtual address space — not physical RAM.")
2191 (license license:openldap2.8)))
2193 (define-public lmdbxx
2196 (version "0.9.14.0")
2201 (url "https://github.com/drycpp/lmdbxx")
2203 (file-name (git-file-name name version))
2205 (base32 "1jmb9wg2iqag6ps3z71bh72ymbcjrb6clwlkgrqf1sy80qwvlsn6"))))
2208 (list (string-append "PREFIX=" (assoc-ref %outputs "out")))
2210 (modify-phases %standard-phases
2211 (delete 'configure))))
2212 (build-system gnu-build-system)
2213 (inputs `(("lmdb" ,lmdb)))
2214 (home-page "http://lmdbxx.sourceforge.net")
2215 (synopsis "C++11 wrapper for the LMDB embedded B+ tree database library")
2216 (description "@code{lmdbxx} is a comprehensive @code{C++} wrapper for the
2217 @code{LMDB} embedded database library, offering both an error-checked
2218 procedural interface and an object-oriented resource interface with RAII
2220 (license license:unlicense)))
2222 (define-public libpqxx
2229 "http://pqxx.org/download/software/libpqxx/"
2230 name "-" version ".tar.gz"))
2233 "0f6wxspp6rx12fkasanb0z2g2gc8dhcfwnxagx8wwqbpg6ifsz09"))))
2234 (build-system gnu-build-system)
2236 `(("python" ,python-2)))
2237 (inputs `(("postgresql" ,postgresql)))
2239 `(#:tests? #f ; # FAIL: 1
2241 (modify-phases %standard-phases
2242 (add-before 'configure 'fix-sed-command
2244 ;; Newer sed versions error out if double brackets are not used.
2245 (substitute* "configure"
2246 (("\\[:space:\\]") "[[:space:]]"))
2248 (synopsis "C++ connector for PostgreSQL")
2250 "Libpqxx is a C++ library to enable user programs to communicate with the
2251 PostgreSQL database back-end. The database back-end can be local or it may be
2252 on another machine, accessed via TCP/IP.")
2253 (home-page "http://pqxx.org/")
2254 (license license:bsd-3)))
2256 (define-public python-peewee
2258 (name "python-peewee")
2263 (uri (pypi-uri "peewee" version))
2266 "1j4sh946k0736m7pd54z0y6i2hjhgg3kdllx1pwq8xkzzcgrx1xw"))))
2267 (build-system python-build-system)
2269 `(#:tests? #f)) ; Fails to import test data
2271 `(("python-cython" ,python-cython)))
2272 (home-page "https://github.com/coleifer/peewee/")
2273 (synopsis "Small object-relational mapping utility")
2275 "Peewee is a simple and small ORM (object-relation mapping) tool. Peewee
2276 handles converting between pythonic values and those used by databases, so you
2277 can use Python types in your code without having to worry. It has built-in
2278 support for sqlite, mysql and postgresql. If you already have a database, you
2279 can autogenerate peewee models using @code{pwiz}, a model generator.")
2280 (license license:expat)))
2282 (define-public python2-peewee
2283 (package-with-python2 python-peewee))
2285 (define-public python-tortoise-orm
2287 (name "python-tortoise-orm")
2292 (uri (pypi-uri "tortoise-orm" version))
2295 "0wr7p4v0b16ypm9fcpwpl99kf491m6w3jkd13xcsgq13fy73fbqc"))))
2296 (build-system python-build-system)
2297 ;; Disable tests for now. They pull in a lot of dependencies.
2298 (arguments `(#:tests? #f))
2300 `(("python-asynctest" ,python-asynctest)
2301 ("python-nose2" ,python-nose2)))
2303 `(("python-aiosqlite" ,python-aiosqlite)
2304 ("python-pypika" ,python-pypika)
2305 ("python-ciso8601" ,python-ciso8601)
2306 ("python-typing-extensions"
2307 ,python-typing-extensions)))
2309 "https://github.com/tortoise/tortoise-orm")
2311 "Easy async ORM for python, built with relations in mind")
2313 "Tortoise ORM is an easy-to-use asyncio ORM (Object Relational Mapper)
2314 inspired by Django. Tortoise ORM was build with relations in mind and
2315 admiration for the excellent and popular Django ORM. It’s engraved in its
2316 design that you are working not with just tables, you work with relational
2318 (license license:asl2.0)))
2320 (define-public sqlcipher
2327 (uri (string-append "https://github.com/sqlcipher/" name
2328 "/archive/v" version ".tar.gz"))
2330 (base32 "1nxarwbci8jx99f1d0y1ivxcv25s78l1p7q6qy28lkpkcx8pm2b9"))
2331 (file-name (string-append name "-" version ".tar.gz"))))
2332 (build-system gnu-build-system)
2334 `(("libcrypto" ,openssl)
2335 ("libtcl8.6" ,tcl))) ; required for running the tests
2340 '("--enable-tempstore=yes"
2341 "CFLAGS=-DSQLITE_HAS_CODEC -DSQLITE_ENABLE_FTS3"
2342 "LDFLAGS=-lcrypto -ltcl8.6"
2344 ;; tests cannot be run from the Makefile
2345 ;; see: <https://github.com/sqlcipher/sqlcipher/issues/172>
2346 #:test-target "testfixture"
2348 (modify-phases %standard-phases
2349 (add-before 'check 'build-test-runner
2350 (assoc-ref %standard-phases 'check))
2353 (invoke "./testfixture" "test/crypto.test"))))))
2354 (home-page "https://www.zetetic.net/sqlcipher/")
2356 "Library providing transparent encryption of SQLite database files")
2357 (description "SQLCipher is an implementation of SQLite, extended to
2358 provide transparent 256-bit AES encryption of database files. Pages are
2359 encrypted before being written to disk and are decrypted when read back. It’s
2360 well suited for protecting embedded application databases and for mobile
2363 ;; src/{crypto.c,crypto_impl.c,crypto.h,crypto_cc.c,crypto_libtomcrypt.c},
2364 ;; src/{crypto_openssl.c,sqlcipher.h}, tool/crypto-speedtest.tcl,
2365 ;; test/crypto.test are licensed under a 3-clause BSD license. All other
2366 ;; source files are in the public domain.
2367 (license (list license:public-domain license:bsd-3))))
2369 (define-public python-pyodbc-c
2371 (name "python-pyodbc-c")
2376 (uri (string-append "https://gitlab.com/daym/pyodbc-c/repository/"
2377 "archive.tar.gz?ref=v" version))
2380 "05aq2297k779xidmxcwkrrxjvj1bh2q7d9a1rcjv6zr15y764ga9"))
2381 (file-name (string-append name "-" version ".tar.gz"))))
2382 (build-system python-build-system)
2384 `(("unixodbc" ,unixodbc)))
2386 `(;; No unit tests exist.
2388 (home-page "https://github.com/mkleehammer/pyodbc")
2389 (synopsis "Python ODBC Library")
2390 (description "@code{python-pyodbc-c} provides a Python DB-API driver
2392 (license (license:x11-style "file://LICENSE.TXT"))))
2394 (define-public python2-pyodbc-c
2395 (package-with-python2 python-pyodbc-c))
2397 (define-public python-pyodbc
2399 (name "python-pyodbc")
2404 (uri (pypi-uri "pyodbc" version))
2406 (base32 "0skjpraar6hcwsy82612bpj8nw016ncyvvq88j5syrikxgp5saw5"))
2407 (file-name (string-append name "-" version ".tar.gz"))))
2408 (build-system python-build-system)
2410 `(("unixodbc" ,unixodbc)))
2412 `(#:tests? #f)) ; no unit tests exist
2413 (home-page "https://github.com/mkleehammer/pyodbc")
2414 (synopsis "Python ODBC Library")
2415 (description "@code{python-pyodbc} provides a Python DB-API driver
2417 (license (license:x11-style "file:///LICENSE.TXT"))))
2419 (define-public python2-pyodbc
2420 (package-with-python2 python-pyodbc))
2422 (define-public mdbtools
2430 (url "https://github.com/brianb/mdbtools")
2432 (file-name (git-file-name name version))
2435 "0gwcpp9y09xhs21g7my2fs8ncb8i6ahlyixcx8jd3q97jbzj441l"))))
2436 (build-system gnu-build-system)
2440 `(("autoconf" ,autoconf)
2441 ("automake" ,automake)
2442 ("libtool" ,libtool)
2443 ("pkg-config" ,pkg-config)
2444 ("txt2man" ,txt2man)
2446 (home-page "http://mdbtools.sourceforge.net/")
2447 (synopsis "Read Microsoft Access databases")
2448 (description "MDB Tools is a set of tools and applications to read the
2449 proprietary MDB file format used in Microsoft's Access database package. This
2450 includes programs to export schema and data from Microsoft's Access database
2451 file format to other databases such as MySQL, Oracle, Sybase, PostgreSQL,
2452 etc., and an SQL engine for performing simple SQL queries.")
2453 (license (list license:lgpl2.0
2456 (define-public python-lmdb
2458 (name "python-lmdb")
2462 (uri (pypi-uri "lmdb" version))
2465 "1di1gj2agbxwqqwrpk4w58dpfah0kl10ha20s63dlqdd1bgzydj1"))
2466 (modules '((guix build utils)))
2468 ;; Delete bundled lmdb source files.
2470 (for-each delete-file (list "lib/lmdb.h"
2475 (build-system python-build-system)
2480 (modify-phases %standard-phases
2481 (add-before 'build 'use-system-lmdb
2482 (lambda* (#:key inputs #:allow-other-keys)
2483 (let ((lmdb (assoc-ref inputs "lmdb")))
2484 (setenv "LMDB_PURE" "set") ; don't apply env-copy-txn.patch
2485 (setenv "LMDB_FORCE_SYSTEM" "set")
2486 (setenv "LMDB_INCLUDEDIR" (string-append lmdb "/include"))
2487 (setenv "LMDB_LIBDIR" (string-append lmdb "/lib"))
2489 ;; Tests fail with: ‘lmdb.tool: Please specify environment (--env)’.
2491 (home-page "https://github.com/dw/py-lmdb")
2492 (synopsis "Python binding for the ‘Lightning’ database (LMDB)")
2494 "python-lmdb or py-lmdb is a Python binding for the @dfn{Lightning
2495 Memory-Mapped Database} (LMDB), a high-performance key-value store.")
2497 (list license:openldap2.8
2498 ;; ‘lib/win32/inttypes.h’ and ‘lib/win32-stdint/stdint.h’ are BSD-3,
2499 ;; but not actually needed on platforms currently supported by Guix.
2502 (define-public python-orator
2504 (name "python-orator")
2508 (uri (pypi-uri "orator" version))
2511 "0mbgybz63ryhr9p1f4glnls5c57jp6il3dw0kf97f3pj80687rvg"))))
2512 (build-system python-build-system)
2513 ;; FIXME: Tests are not distributed with PyPI, and the repository
2514 ;; does not contain setup.py. How to test?
2515 (arguments '(#:tests? #f))
2517 `(("python-backpack" ,python-backpack)
2518 ("python-blinker" ,python-blinker)
2519 ("python-cleo" ,python-cleo)
2520 ("python-faker" ,python-faker)
2521 ("python-inflection" ,python-inflection)
2522 ("python-lazy-object-proxy" ,python-lazy-object-proxy)
2523 ("python-pendulum" ,python-pendulum)
2524 ("python-pyaml" ,python-pyaml)
2525 ("python-pygments" ,python-pygments)
2526 ("python-pyyaml" ,python-pyyaml)
2527 ("python-simplejson" ,python-simplejson)
2528 ("python-six" ,python-six)
2529 ("python-wrapt" ,python-wrapt)))
2530 (home-page "https://orator-orm.com/")
2531 (synopsis "ActiveRecord ORM for Python")
2533 "Orator provides a simple ActiveRecord-like Object Relational Mapping
2534 implementation for Python.")
2535 (license license:expat)
2536 (properties `((python2-variant . ,(delay python2-orator))))))
2538 (define-public python2-orator
2539 (package-with-python2 (strip-python2-variant python-orator)))
2541 (define-public virtuoso-ose
2543 (name "virtuoso-ose")
2549 "https://github.com/openlink/virtuoso-opensource/releases/"
2550 "download/v" version "/virtuoso-opensource-" version ".tar.gz"))
2552 (base32 "0r1xakclkfi69pzh8z2k16z3x0m49pxp764icj0ad4w4bb97fr42"))))
2553 (build-system gnu-build-system)
2555 `(#:tests? #f ; Tests require a network connection.
2556 ;; TODO: Removing the libsrc/zlib source directory breaks the build.
2557 ;; This indicates that the internal zlib code may still be used.
2558 #:configure-flags '("--without-internal-zlib"
2560 "--enable-static=no")
2562 (modify-phases %standard-phases
2563 ;; Even with "--enable-static=no", "libvirtuoso-t.a" is left in
2564 ;; the build output. The following phase removes it.
2565 (add-after 'install 'remove-static-libs
2566 (lambda* (#:key outputs #:allow-other-keys)
2567 (let ((lib (string-append (assoc-ref outputs "out") "/lib")))
2568 (for-each (lambda (file)
2569 (delete-file (string-append lib "/" file)))
2571 "libvirtuoso-t.la"))))))))
2573 `(("openssl" ,openssl-1.0)
2574 ("net-tools" ,net-tools)
2575 ("readline" ,readline)
2577 (home-page "http://vos.openlinksw.com/owiki/wiki/VOS/")
2578 (synopsis "Multi-model database system")
2579 (description "Virtuoso is a scalable cross-platform server that combines
2580 relational, graph, and document data management with web application server
2581 and web services platform functionality.")
2582 ;; configure: error: ... can only be build on 64bit platforms
2583 (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))
2584 (license license:gpl2)))
2586 (define-public python-ccm
2593 (uri (pypi-uri "ccm" version))
2596 "177dfxsmk3k4cih6fh6v8d91bh4nqx7ns6pc07w7m7i3cvdx3c8n"))))
2597 (build-system python-build-system)
2599 `(("python-pyyaml" ,python-pyyaml)
2600 ;; Not listed in setup.py, but used in ccmlib/node.py for full
2602 ("python-psutil" ,python-psutil)
2603 ("python-six" ,python-six)))
2604 (home-page "https://github.com/pcmanus/ccm")
2605 (synopsis "Cassandra Cluster Manager for Apache Cassandra clusters on
2607 (description "Cassandra Cluster Manager is a development tool for testing
2608 local Cassandra clusters. It creates, launches and removes Cassandra clusters
2610 (license license:asl2.0)))
2612 (define-public python2-ccm
2613 (package-with-python2 python-ccm))
2615 (define-public python2-pysqlite
2617 (name "python2-pysqlite")
2622 (uri (pypi-uri "pysqlite" version))
2625 "1424gwq9sil2ffmnizk60q36vydkv8rxs6m7xs987kz8cdc37lqp"))))
2626 (build-system python-build-system)
2628 `(("sqlite" ,sqlite)))
2630 `(#:python ,python-2 ; incompatible with Python 3
2631 #:tests? #f)) ; no test target
2632 (home-page "https://github.com/ghaering/pysqlite")
2633 (synopsis "SQLite bindings for Python")
2635 "Pysqlite provides SQLite bindings for Python that comply to the
2636 Database API 2.0T.")
2637 (license license:zlib)))
2639 (define-public python-sqlalchemy
2641 (name "python-sqlalchemy")
2646 (uri (pypi-uri "SQLAlchemy" version))
2648 (base32 "18b9am7bsqc4nj3d2h5r93i002apczxfvpfpcqbd6f0385zmrwnj"))))
2649 (build-system python-build-system)
2651 `(("python-cython" ,python-cython) ; for C extensions
2652 ("python-pytest" ,python-pytest)
2653 ("python-mock" ,python-mock))) ; for tests
2656 (modify-phases %standard-phases
2658 (lambda _ (invoke "py.test"))))))
2659 (home-page "https://www.sqlalchemy.org")
2660 (synopsis "Database abstraction library")
2662 "SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that
2663 gives application developers the full power and flexibility of SQL. It
2664 provides a full suite of well known enterprise-level persistence patterns,
2665 designed for efficient and high-performing database access, adapted into a
2666 simple and Pythonic domain language.")
2667 (license license:x11)))
2669 (define-public python2-sqlalchemy
2670 (package-with-python2 python-sqlalchemy))
2672 (define-public python-sqlalchemy-utils
2674 (name "python-sqlalchemy-utils")
2679 (uri (pypi-uri "SQLAlchemy-Utils" version))
2682 "1myn71dn8j74xglyh46f12sh8ywb7j0j732rzwq70kvwwnq32m73"))))
2683 (build-system python-build-system)
2685 '(#:tests? #f)) ; FIXME: Many tests require a running database server.
2687 ;; (modify-phases %standard-phases
2690 ;; (zero? (system* "py.test" "sqlalchemy_utils" "tests")))))
2692 `(("python-six" ,python-six)
2693 ("python-sqlalchemy" ,python-sqlalchemy)))
2695 `(("python-dateutil" ,python-dateutil)
2696 ("python-flexmock" ,python-flexmock)
2697 ("python-psycopg2" ,python-psycopg2)
2698 ("python-pytest" ,python-pytest)
2699 ("python-pytz" ,python-pytz)))
2700 (home-page "https://github.com/kvesteri/sqlalchemy-utils")
2701 (synopsis "Various utility functions for SQLAlchemy")
2703 "SQLAlchemy-utils provides various utility functions and custom data types
2704 for SQLAlchemy. SQLAlchemy is an SQL database abstraction library for Python.
2706 You might also want to install the following optional dependencies:
2708 @item @code{python-passlib}
2709 @item @code{python-babel}
2710 @item @code{python-cryptography}
2711 @item @code{python-pytz}
2712 @item @code{python-psycopg2}
2713 @item @code{python-furl}
2714 @item @code{python-flask-babel}
2717 (license license:bsd-3)))
2719 (define-public python2-sqlalchemy-utils
2720 (package-with-python2 python-sqlalchemy-utils))
2722 (define-public python-alchemy-mock
2724 (name "python-alchemy-mock")
2726 (home-page "https://github.com/miki725/alchemy-mock")
2729 (uri (pypi-uri "alchemy-mock" version))
2732 "0ylxygl3bcdapzz529n8wgk7vx9gjwb3ism564ypkpd7dbsw653r"))))
2733 (build-system python-build-system)
2735 '(#:phases (modify-phases %standard-phases
2738 ;; Create pytest.ini that adds doctest options to
2739 ;; prevent test failure. Taken from tox.ini.
2740 (call-with-output-file "pytest.ini"
2742 (format port "[pytest]
2743 doctest_optionflags=IGNORE_EXCEPTION_DETAIL
2745 (invoke "pytest" "-vv" "--doctest-modules"
2746 "alchemy_mock/"))))))
2748 `(("python-mock" ,python-mock)
2749 ("python-pytest" ,python-pytest)))
2751 `(("python-six" ,python-six)
2752 ("python-sqlalchemy" ,python-sqlalchemy)))
2753 (synopsis "Mock helpers for SQLAlchemy")
2755 "This package provides mock helpers for SQLAlchemy that makes it easy
2756 to mock an SQLAlchemy session while preserving the ability to do asserts.
2758 Normally Normally SQLAlchemy's expressions cannot be easily compared as
2759 comparison on binary expression produces yet another binary expression, but
2760 this library provides functions to facilitate such comparisons.")
2761 (license license:expat)))
2763 (define-public python-alembic
2765 (name "python-alembic")
2770 (uri (pypi-uri "alembic" version))
2772 (base32 "0if2dgb088clk738p26bwk50735h6jpd2kacdgc5capv2hiz6d2k"))))
2773 (build-system python-build-system)
2775 '(#:phases (modify-phases %standard-phases
2778 (invoke "pytest" "-vv"))))))
2780 `(("python-mock" ,python-mock)
2781 ("python-pytest-cov" ,python-pytest-cov)))
2783 `(("python-dateutil" ,python-dateutil)
2784 ("python-sqlalchemy" ,python-sqlalchemy)
2785 ("python-mako" ,python-mako)
2786 ("python-editor" ,python-editor)))
2787 (home-page "https://bitbucket.org/zzzeek/alembic")
2788 (synopsis "Database migration tool for SQLAlchemy")
2790 "Alembic is a lightweight database migration tool for usage with the
2791 SQLAlchemy Database Toolkit for Python.")
2792 (license license:expat)))
2794 (define-public python2-alembic
2795 (package-with-python2 python-alembic))
2797 (define-public python-pickleshare
2799 (name "python-pickleshare")
2804 (uri (pypi-uri "pickleshare" version))
2806 (base32 "1jmghg3c53yp1i8cm6pcrm280ayi8621rwyav9fac7awjr3kss47"))))
2807 (build-system python-build-system)
2809 `(#:phases (modify-phases %standard-phases
2812 (invoke "pytest"))))))
2814 `(("python-pytest" ,python-pytest)))
2815 (home-page "https://github.com/vivainio/pickleshare")
2816 (synopsis "Tiny key value database with concurrency support")
2818 "PickleShare is a small ‘shelve’-like datastore with concurrency support.
2819 Like shelve, a PickleShareDB object acts like a normal dictionary. Unlike
2820 shelve, many processes can access the database simultaneously. Changing a
2821 value in database is immediately visible to other processes accessing the same
2822 database. Concurrency is possible because the values are stored in separate
2823 files. Hence the “database” is a directory where all files are governed by
2825 (properties `((python2-variant . ,(delay python2-pickleshare))))
2826 (license license:expat)))
2828 (define-public python2-pickleshare
2829 (let ((pickleshare (package-with-python2
2830 (strip-python2-variant python-pickleshare))))
2831 (package (inherit pickleshare)
2832 (propagated-inputs `(("python2-pathlib2" ,python2-pathlib2)
2833 ,@(package-propagated-inputs pickleshare))))))
2835 (define-public python-apsw
2837 (name "python-apsw")
2838 (version "3.31.1-r1")
2842 (uri (string-append "https://github.com/rogerbinns/apsw/releases"
2843 "/download/" version "/apsw-" version ".zip"))
2846 "1gap5lr6c7bp134nzvfwr693i6d0fqyaysg3ms2cayjldv616yfx"))))
2847 (build-system python-build-system)
2849 `(("unzip" ,unzip)))
2851 `(("sqlite" ,sqlite)))
2854 (modify-phases %standard-phases
2857 (invoke "python" "setup.py" "build" "--enable-all-extensions")
2859 (add-after 'build 'build-test-helper
2861 (invoke "gcc" "-fPIC" "-shared" "-o" "./testextension.sqlext"
2862 "-I." "-Isqlite3" "src/testextension.c")
2865 (lambda* (#:key inputs outputs #:allow-other-keys)
2866 (add-installed-pythonpath inputs outputs)
2867 (invoke "python" "setup.py" "test")
2869 (home-page "https://github.com/rogerbinns/apsw/")
2870 (synopsis "Another Python SQLite Wrapper")
2871 (description "APSW is a Python wrapper for the SQLite
2872 embedded relational database engine. In contrast to other wrappers such as
2873 pysqlite it focuses on being a minimal layer over SQLite attempting just to
2874 translate the complete SQLite API into Python.")
2875 (license license:zlib)))
2877 (define-public python2-apsw
2878 (package-with-python2 python-apsw))
2880 (define-public python-aiosqlite
2882 (name "python-aiosqlite")
2887 (uri (pypi-uri "aiosqlite" version))
2890 "1w8248yz85xyzvvh4jaxnc59fqil45aka6h82kn1rcih4rjxbnn1"))))
2891 (build-system python-build-system)
2893 `(("python-aiounittest" ,python-aiounittest)))
2894 (home-page "https://github.com/jreese/aiosqlite")
2896 "Asyncio bridge for sqlite3")
2898 "The package aiosqlite replicates the standard sqlite3 module, but with
2899 async versions of all the standard connection and cursor methods, and context
2900 managers for automatically closing connections.")
2901 (license license:expat)))
2903 (define-public python2-neo4j-driver
2905 (name "python2-neo4j-driver")
2906 ;; NOTE: When upgrading to 1.5.0, please add a python3 variant.
2910 (uri (pypi-uri "neo4j-driver" version))
2913 "011r1vh182p8mm83d8dz9rfnc3l7rf7fd00cyrbyfzi71jmc4g98"))))
2914 (build-system python-build-system)
2916 `(#:python ,python-2))
2917 (home-page "https://neo4j.com/developer/python/")
2918 (synopsis "Neo4j driver code written in Python")
2919 (description "This package provides the Neo4j Python driver that connects
2920 to the database using Neo4j's binary protocol. It aims to be minimal, while
2921 being idiomatic to Python.")
2922 (license license:asl2.0)))
2924 (define-public python2-py2neo
2926 (name "python2-py2neo")
2930 (uri (pypi-uri "py2neo" version))
2933 "1f1q95vqcvlc3nsc33p841swnjdcjazddlq2dzi3qfnjqjrajxw1"))))
2934 (build-system python-build-system)
2936 `(#:python ,python-2))
2937 (home-page "https://py2neo.org")
2938 (synopsis "Library and toolkit for working with Neo4j in Python")
2939 (description "This package provides a client library and toolkit for
2940 working with Neo4j from within Python applications and from the command
2941 line. The core library has no external dependencies and has been carefully
2942 designed to be easy and intuitive to use.")
2943 (license license:asl2.0)))
2945 (define-public python-psycopg2
2947 (name "python-psycopg2")
2952 (uri (pypi-uri "psycopg2" version))
2954 (base32 "0hzmk6b1hb5riqkljr5xics6p4zbvmis6knbczb7zhq7273zc8zv"))))
2955 (build-system python-build-system)
2957 ;; Tests would require a postgresql database "psycopg2_test"
2958 ;; and a running postgresql database management service.
2959 `(#:tests? #f)) ; TODO re-enable after providing a test-db.
2961 `(("postgresql" ,postgresql))) ; libpq
2962 (home-page "http://initd.org/psycopg/")
2963 (synopsis "Python PostgreSQL adapter")
2965 "psycopg2 is a thread-safe PostgreSQL adapter that implements DB-API
2967 (license license:lgpl3+)))
2969 (define-public python2-psycopg2
2970 (package-with-python2 python-psycopg2))
2972 (define-public python-sadisplay
2974 (name "python-sadisplay")
2979 (uri (pypi-uri "sadisplay" version))
2982 "01d9lxhmgpb68gy8rd6zj6fcwp84n2qq210n1qsk3qbsir79bzh4"))))
2983 (build-system python-build-system)
2985 `(("python-sqlalchemy" ,python-sqlalchemy)))
2988 `(("python-nose" ,python-nose)))
2989 (home-page "https://bitbucket.org/estin/sadisplay")
2990 (synopsis "SQLAlchemy schema displayer")
2991 (description "This package provides a program to build Entity
2992 Relationship diagrams from a SQLAlchemy model (or directly from the
2994 (license license:bsd-3)))
2996 (define-public python2-sadisplay
2997 (package-with-python2 python-sadisplay))
2999 (define-public yoyo-migrations
3001 (name "yoyo-migrations")
3005 ;; We use the upstream repository, as the tests are not included in the
3009 (url "https://hg.sr.ht/~olly/yoyo")
3010 (changeset (string-append "v" version "-release"))))
3011 (file-name (string-append name "-" version "-checkout"))
3013 (base32 "0q2z9bgdj3wyix7yvqsayfs21grp5av8ilh411lgmjhigszkvhcq"))))
3014 (build-system python-build-system)
3016 ;; XXX: Tests require a connection to some pgsql database and psycopg
3017 ;; fails to connect to it.
3020 `(("python-sqlparse" ,python-sqlparse)
3021 ("python-tabulate" ,python-tabulate)))
3022 (home-page "https://ollycope.com/software/yoyo/latest/")
3023 (synopsis "Database migrations with SQL")
3025 "Yoyo is a database schema migration tool. Migrations are written as SQL
3026 files or Python scripts that define a list of migration steps.")
3027 (license license:asl2.0)))
3029 (define-public python-mysqlclient
3031 (name "python-mysqlclient")
3036 (uri (pypi-uri "mysqlclient" version))
3039 "1rf5l8hazs3v18hmcrm90z3hi9wxv553ipwd5l6kj8j7l6p7abzv"))))
3040 (build-system python-build-system)
3041 (arguments '(#:tests? #f)) ;XXX: requires a live database
3043 `(("mysql" ,mariadb "lib")
3044 ("mysql-dev" ,mariadb "dev")))
3045 (home-page "https://github.com/PyMySQL/mysqlclient-python")
3046 (synopsis "MySQLdb is an interface to the popular MySQL database server for Python")
3047 (description "MySQLdb is an interface to the popular MySQL database server
3048 for Python. The design goals are:
3050 @item Compliance with Python database API version 2.0 [PEP-0249],
3051 @item Thread-safety,
3052 @item Thread-friendliness (threads will not block each other).
3054 (license license:gpl2)))
3056 (define-public python-hiredis
3058 (name "python-hiredis")
3063 (uri (pypi-uri "hiredis" version))
3066 "1dfm2k9l9zar9nw9fwmm74zrgraxdxs04vx9li56fjcf289qx5fa"))))
3067 (build-system python-build-system)
3071 (home-page "https://github.com/redis/hiredis-py")
3072 (synopsis "Python extension that wraps protocol parsing code in hiredis")
3073 (description "Python-hiredis is a python extension that wraps protocol
3074 parsing code in hiredis. It primarily speeds up parsing of multi bulk replies.")
3075 (license license:bsd-3)))
3077 (define-public python2-hiredis
3078 (package-with-python2 python-hiredis))
3080 (define-public python-fakeredis
3082 (name "python-fakeredis")
3087 (uri (pypi-uri "fakeredis" version))
3090 "1s12mn4q4hz7402139khn9fx56kibj7nn0d6w81hn0zs07b90wpc"))))
3091 (build-system python-build-system)
3096 `(("python-sortedcontainers" ,python-sortedcontainers)))
3097 (home-page "https://github.com/jamesls/fakeredis")
3098 (synopsis "Fake implementation of redis API for testing purposes")
3100 "Fakeredis is a pure-Python implementation of the redis-py Python client
3101 that simulates talking to a redis server. It was created for a single purpose:
3102 to write unit tests.
3104 Setting up redis is not hard, but one often wants to write unit tests that don't
3105 talk to an external server such as redis. This module can be used as a
3106 reasonable substitute.")
3107 (license license:bsd-3)))
3109 (define-public python2-fakeredis
3110 (package-with-python2 python-fakeredis))
3112 (define-public python-redis
3114 (name "python-redis")
3119 (uri (pypi-uri "redis" version))
3121 (base32 "18h5b87g15x3j6pb1h2q27ri37p2qpvc9n2wgn5yl3b6m3y0qzhf"))))
3122 (build-system python-build-system)
3123 ;; Tests require a running Redis server.
3124 (arguments '(#:tests? #f))
3125 ;; As long as we are not running test, we do not need this input :-)
3127 ;; `(("python-pytest" ,python-pytest)))
3128 (home-page "https://github.com/andymccurdy/redis-py")
3129 (synopsis "Redis Python client")
3131 "This package provides a Python interface to the Redis key-value store.")
3132 (license license:expat)))
3134 (define-public python2-redis
3135 (package-with-python2 python-redis))
3137 (define-public python-rq
3145 (url "https://github.com/rq/rq")
3146 (commit (string-append "v" version))))
3147 (file-name (git-file-name name version))
3149 (base32 "0ikqmpq0g1qiqwd7ar1286l4hqjb6aj2wr844gihhb8ijzwhp8va"))))
3150 (build-system python-build-system)
3152 '(#:phases (modify-phases %standard-phases
3153 (add-before 'check 'start-redis
3155 (invoke "redis-server" "--daemonize" "yes")))
3157 (lambda* (#:key outputs #:allow-other-keys)
3158 (let ((out (assoc-ref outputs "out")))
3159 ;; Drop test that needs the SDK for Sentry.io.
3160 (delete-file "tests/test_sentry.py")
3161 ;; Ensure 'rq' and 'rqworker' ends up on PATH.
3162 (setenv "PATH" (string-append out "/bin:"
3164 (invoke "pytest" "-vv")))))))
3166 `(("python-mock" ,python-mock)
3167 ("python-pytest" ,python-pytest)
3170 `(("python-click" ,python-click)
3171 ("python-redis" ,python-redis)))
3172 (home-page "https://python-rq.org/")
3173 (synopsis "Simple job queues for Python")
3175 "RQ (Redis Queue) is a simple Python library for queueing jobs and
3176 processing them in the background with workers. It is backed by Redis and it
3177 is designed to have a low barrier to entry.")
3178 (license license:bsd-2)))
3180 (define-public python2-rq
3181 (package-with-python2 python-rq))
3183 (define-public python-rq-scheduler
3185 (name "python-rq-scheduler")
3187 (home-page "https://github.com/rq/rq-scheduler")
3192 (commit (string-append "v" version))))
3193 (file-name (git-file-name name version))
3196 "0xg6yazqs5kbr2ayvhvljs1h5vgx5k5dds613fmhswln7gglf9hk"))))
3197 (build-system python-build-system)
3199 '(#:phases (modify-phases %standard-phases
3200 (add-before 'check 'start-redis
3202 (invoke "redis-server" "--daemonize" "yes")))
3205 (substitute* "run_tests.py"
3208 (invoke "./run_tests.py"))))))
3213 `(("python-croniter" ,python-croniter)
3214 ("python-rq" ,python-rq)))
3215 (synopsis "Job scheduling capabilities for RQ (Redis Queue)")
3217 "This package provides job scheduling capabilities to @code{python-rq}
3219 (license license:expat)))
3221 (define-public python-trollius-redis
3223 (name "python-trollius-redis")
3228 (uri (pypi-uri "trollius_redis" version))
3231 "0k3vypszmgmaipgw9xscvgm79h2zd6p6ci8gdp5sxl6g5kbqr9fy"))))
3232 (build-system python-build-system)
3233 ;; TODO: Tests require packaging 'hiredis'.
3234 (arguments '(#:tests? #f))
3235 (home-page "https://github.com/benjolitz/trollius-redis")
3236 (synopsis "Port of asyncio-redis to trollius")
3237 (description "@code{trollius-redis} is a Redis client for Python
3238 trollius. It is an asynchronous IO (PEP 3156) implementation of the
3240 (license license:bsd-2)))
3242 (define-public python2-trollius-redis
3243 (package-with-python2 python-trollius-redis))
3245 (define-public python-sqlparse
3247 (name "python-sqlparse")
3251 (uri (pypi-uri "sqlparse" version))
3254 "0j652a6z7bdf6c77aczfn8m8b2nsr1bcqq48wzghf8vi6wvj0qp1"))))
3255 (build-system python-build-system)
3258 (modify-phases %standard-phases
3260 (lambda _ (invoke "py.test"))))))
3262 `(("python-pytest" ,python-pytest)))
3263 (home-page "https://github.com/andialbrecht/sqlparse")
3264 (synopsis "Non-validating SQL parser")
3265 (description "Sqlparse is a non-validating SQL parser for Python. It
3266 provides support for parsing, splitting and formatting SQL statements.")
3267 (license license:bsd-3)))
3269 (define-public python2-sqlparse
3270 (package-with-python2 python-sqlparse))
3272 (define-public python-sql
3279 (uri (pypi-uri "python-sql" version))
3281 (base32 "05ni936y0ia9xmryl7mlhbj9i80nnvq1bi4zxhb96rv7yvpb3fqb"))))
3282 (build-system python-build-system)
3283 (home-page "https://python-sql.tryton.org/")
3284 (synopsis "Library to write SQL queries in a pythonic way")
3285 (description "@code{python-sql} is a library to write SQL queries, that
3286 transforms idiomatic python function calls to well-formed SQL queries.")
3287 (license license:bsd-3)))
3289 (define-public python2-sql
3290 (package-with-python2 python-sql))
3292 (define-public python-pypika
3294 (name "python-pypika")
3297 (origin (method git-fetch)
3299 (url "https://github.com/kayak/pypika")
3300 (commit (string-append "v" version))))
3301 (file-name (git-file-name name version))
3304 "089z1c778q1fwhzsc88ws8j5gm2hgxknibabn4wpax8rz2bfs3ck"))))
3305 (build-system python-build-system)
3307 `(("python-parameterized" ,python-parameterized)))
3308 (home-page "https://github.com/kayak/pypika")
3309 (synopsis "SQL query builder API for Python")
3311 "PyPika is a python SQL query builder that exposes the full richness of
3312 the SQL language using a syntax that reflects the resulting query.")
3313 (license license:asl2.0)))
3315 (define-public mongo-tools
3317 (name "mongo-tools")
3320 (origin (method git-fetch)
3322 (url "https://github.com/mongodb/mongo-tools")
3323 (commit (string-append "r" version))))
3324 (file-name (git-file-name name version))
3327 "1bcsz5cvj39a7nsxsfqmz9igrw33j6yli9kffigqyscs52amw7x1"))))
3328 (build-system go-build-system)
3330 `(#:import-path "github.com/mongodb/mongo-tools"
3331 #:modules ((srfi srfi-1)
3332 (guix build go-build-system)
3334 #:install-source? #f
3337 '("bsondump" "mongodump" "mongoexport" "mongofiles"
3338 "mongoimport" "mongooplog" "mongorestore"
3339 "mongostat" "mongotop")))
3340 (modify-phases %standard-phases
3341 (add-after 'unpack 'delete-bundled-source-code
3343 (delete-file-recursively
3344 "src/github.com/mongodb/mongo-tools/vendor")
3346 (add-after 'delete-bundled-source-code 'patch-source
3348 ;; Remove a redundant argument that causes compilation to fail.
3350 "src/github.com/mongodb/mongo-tools/mongorestore/filepath.go"
3351 (("skipping restore of system.profile collection\", db)")
3352 "skipping restore of system.profile collection\")"))
3356 (for-each (lambda (tool)
3359 ;; This is where the tests expect to find the
3361 "-o" ,(string-append
3362 "src/github.com/mongodb/mongo-tools/bin/"
3365 "-tags=\"ssl sasl\""
3367 "-extldflags=-Wl,-z,now,-z,relro"
3369 "src/github.com/mongodb/mongo-tools/"
3370 tool "/main/" tool ".go"))))
3371 (simple-format #t "build: running ~A\n"
3372 (string-join command))
3373 (apply invoke command)))
3378 (with-directory-excursion "src"
3379 (for-each (lambda (tool)
3382 (string-append "github.com/mongodb/mongo-tools/"
3387 (lambda* (#:key outputs #:allow-other-keys)
3388 (for-each (lambda (tool)
3390 (string-append "src/github.com/mongodb/mongo-tools/bin/"
3392 (string-append (assoc-ref outputs "out")
3397 `(("go-github.com-howeyc-gopass" ,go-github.com-howeyc-gopass)
3398 ("go-github.com-jessevdk-go-flags" ,go-github.com-jessevdk-go-flags)
3399 ("go-golang-org-x-crypto" ,go-golang-org-x-crypto)
3400 ("go-gopkg.in-mgo.v2" ,go-gopkg.in-mgo.v2)
3401 ("go-gopkg.in-tomb.v2" ,go-gopkg.in-tomb.v2)
3402 ("go-github.com-nsf-termbox-go" ,go-github.com-nsf-termbox-go)
3403 ("go-github.com-smartystreets-goconvey" ,go-github.com-smartystreets-goconvey)))
3404 (home-page "https://github.com/mongodb/mongo-tools")
3405 (synopsis "Various tools for interacting with MongoDB and BSON")
3407 "This package includes a collection of tools related to MongoDB.
3410 Display BSON files in a human-readable format
3412 Convert data from JSON, TSV or CSV and insert them into a collection
3414 Write an existing collection to CSV or JSON format
3415 @item mongodump/mongorestore
3416 Dump MongoDB backups to disk in the BSON format
3418 Read MongoDB backups in the BSON format, and restore them to a live database
3420 Monitor live MongoDB servers, replica sets, or sharded clusters
3422 Read, write, delete, or update files in GridFS
3424 Replay oplog entries between MongoDB servers
3426 Monitor read/write activity on a mongo server
3428 (license license:asl2.0)))
3430 ;; There are many wrappers for this in other languages. When touching, please
3431 ;; be sure to ensure all dependencies continue to build.
3432 (define-public apache-arrow
3434 (name "apache-arrow")
3440 (url "https://github.com/apache/arrow")
3441 (commit (string-append "apache-arrow-" version))))
3442 (file-name (git-file-name name version))
3445 "02r6yx3yhywzikd3b0vfkjgddhfiriyx2vpm3jf5880wq59x798a"))))
3446 (build-system cmake-build-system)
3450 (modify-phases %standard-phases
3451 (add-before 'configure 'enter-source-directory
3452 (lambda _ (chdir "cpp") #t))
3453 (add-after 'unpack 'set-env
3455 (setenv "BOOST_ROOT" (assoc-ref %build-inputs "boost"))
3456 (setenv "BROTLI_HOME" (assoc-ref %build-inputs "brotli"))
3457 (setenv "FLATBUFFERS_HOME" (assoc-ref %build-inputs "flatbuffers"))
3458 (setenv "RAPIDJSON_HOME" (assoc-ref %build-inputs "rapidjson"))
3460 #:build-type "Release"
3462 (list "-DARROW_PYTHON=ON"
3465 "-DARROW_PARQUET=ON"
3466 "-DPARQUET_BUILD_EXECUTABLES=ON"
3467 ;; The maintainers disallow using system versions of
3469 ;; https://issues.apache.org/jira/browse/ARROW-3507. This
3470 ;; is unfortunate because jemalloc increases performance:
3471 ;; https://arrow.apache.org/blog/2018/07/20/jemalloc/.
3472 "-DARROW_JEMALLOC=OFF"
3474 ;; The CMake option ARROW_DEPENDENCY_SOURCE is a global
3475 ;; option that instructs the build system how to resolve
3476 ;; each dependency. SYSTEM = Finding the dependency in
3477 ;; system paths using CMake's built-in find_package
3478 ;; function, or using pkg-config for packages that do not
3479 ;; have this feature
3480 "-DARROW_DEPENDENCY_SOURCE=SYSTEM"
3482 ;; Split output into its component packages.
3483 (string-append "-DCMAKE_INSTALL_PREFIX="
3484 (assoc-ref %outputs "lib"))
3485 (string-append "-DCMAKE_INSTALL_RPATH="
3486 (assoc-ref %outputs "lib")
3488 (string-append "-DCMAKE_INSTALL_BINDIR="
3489 (assoc-ref %outputs "out")
3491 (string-append "-DCMAKE_INSTALL_INCLUDEDIR="
3492 (assoc-ref %outputs "include")
3496 "-DARROW_WITH_SNAPPY=ON"
3497 "-DARROW_WITH_ZLIB=ON"
3498 "-DARROW_WITH_ZSTD=ON"
3499 "-DARROW_WITH_LZ4=ON"
3500 "-DARROW_COMPUTE=ON"
3502 "-DARROW_DATASET=ON"
3503 "-DARROW_FILESYSTEM=ON"
3506 ;; Arrow Python C++ integration library (required for
3507 ;; building pyarrow). This library must be built against
3508 ;; the same Python version for which you are building
3509 ;; pyarrow. NumPy must also be installed. Enabling this
3510 ;; option also enables ARROW_COMPUTE, ARROW_CSV,
3511 ;; ARROW_DATASET, ARROW_FILESYSTEM, ARROW_HDFS, and
3515 ;; Building the tests forces on all the
3516 ;; optional features and the use of static
3518 "-DARROW_BUILD_TESTS=OFF"
3519 "-DBENCHMARK_ENABLE_GTEST_TESTS=OFF"
3520 ;;"-DBENCHMARK_ENABLE_TESTING=OFF"
3521 "-DARROW_BUILD_STATIC=OFF")))
3524 ("brotli" ,google-brotli)
3525 ("double-conversion" ,double-conversion)
3529 ("apache-thrift" ,apache-thrift "lib")
3530 ("protobuf" ,protobuf)
3531 ("rapidjson" ,rapidjson)
3535 ("zstd" ,zstd "lib")
3538 ("python-3" ,python)
3539 ("python-numpy" ,python-numpy)))
3541 `(("pkg-config" ,pkg-config)))
3542 (outputs '("out" "lib" "include"))
3543 (home-page "https://arrow.apache.org/")
3544 (synopsis "Columnar in-memory analytics")
3545 (description "Apache Arrow is a columnar in-memory analytics layer
3546 designed to accelerate big data. It houses a set of canonical in-memory
3547 representations of flat and hierarchical data along with multiple
3548 language-bindings for structure manipulation. It also provides IPC and common
3549 algorithm implementations.")
3550 (license license:asl2.0)))
3552 (define-public python-pyarrow
3554 (inherit apache-arrow)
3555 (name "python-pyarrow")
3556 (build-system python-build-system)
3558 '(#:tests? #f ; XXX There are no tests in the "python" directory
3560 (modify-phases %standard-phases
3561 (delete 'build) ; XXX the build is performed again during the install phase
3562 (add-after 'unpack 'enter-source-directory
3563 (lambda _ (chdir "python") #t))
3564 (add-after 'unpack 'make-git-checkout-writable
3566 (for-each make-file-writable (find-files "."))
3569 `(("apache-arrow" ,apache-arrow "lib")
3570 ("python-numpy" ,python-numpy)
3571 ("python-pandas" ,python-pandas)
3572 ("python-six" ,python-six)))
3574 `(("cmake" ,cmake-minimal)
3575 ("pkg-config" ,pkg-config)
3576 ("python-cython" ,python-cython)
3577 ("python-pytest" ,python-pytest)
3578 ("python-pytest-runner" ,python-pytest-runner)
3579 ("python-setuptools-scm" ,python-setuptools-scm)))
3581 (home-page "https://arrow.apache.org/docs/python/")
3582 (synopsis "Python bindings for Apache Arrow")
3584 "This library provides a Pythonic API wrapper for the reference Arrow C++
3585 implementation, along with tools for interoperability with pandas, NumPy, and
3586 other traditional Python scientific computing packages.")
3587 (license license:asl2.0)))
3589 (define-public python2-pyarrow
3590 (package-with-python2 python-pyarrow))
3592 (define-public python-crate
3594 (name "python-crate")
3598 (uri (pypi-uri "crate" version))
3601 "0ngmlvi320c5gsxab0s7qgq0ck4jdlcwvb6lbjhnfprafdp56vvx"))))
3602 (build-system python-build-system)
3604 `(("python-urllib3" ,python-urllib3)))
3605 (home-page "https://github.com/crate/crate-python")
3606 (synopsis "CrateDB Python client")
3608 "This package provides a Python client library for CrateDB.
3609 It implements the Python DB API 2.0 specification and includes support for
3611 (license license:asl2.0)))
3613 (define-public libdbi
3619 (uri (string-append "mirror://sourceforge/libdbi/libdbi/libdbi-"
3620 version "/libdbi-" version ".tar.gz"))
3623 "00s5ra7hdlq25iv23nwf4h1v3kmbiyzx0v9bhggjiii4lpf6ryys"))))
3624 (build-system gnu-build-system)
3625 (synopsis "Database independent abstraction layer in C")
3627 "This library implements a database independent abstraction layer in C,
3628 similar to the DBI/DBD layer in Perl. Writing one generic set of code,
3629 programmers can leverage the power of multiple databases and multiple
3630 simultaneous database connections by using this framework.")
3631 (home-page "http://libdbi.sourceforge.net/")
3632 (license license:lgpl2.1+)))
3634 (define-public libdbi-drivers
3636 (name "libdbi-drivers")
3640 (uri (string-append "mirror://sourceforge/libdbi-drivers/"
3641 "libdbi-drivers/libdbi-drivers-" version
3642 "/libdbi-drivers-" version ".tar.gz"))
3645 "0m680h8cc4428xin4p733azysamzgzcmv4psjvraykrsaz6ymlj3"))))
3646 (build-system gnu-build-system)
3649 ("inetutils" ,inetutils)
3650 ("glibc-locales" ,glibc-locales)
3651 ("mariadb" ,mariadb)))
3653 `(("libdbi" ,libdbi)
3654 ("mariadb:dev" ,mariadb "dev")
3655 ("mariadb:lib" ,mariadb "lib")
3656 ("postgresql" ,postgresql)
3657 ("sqlite" ,sqlite)))
3660 (let ((libdbi (assoc-ref %build-inputs "libdbi"))
3661 (mysql:inc (assoc-ref %build-inputs "mariadb:dev"))
3662 (mysql:lib (assoc-ref %build-inputs "mariadb:lib"))
3663 (postgresql (assoc-ref %build-inputs "postgresql"))
3664 (sqlite (assoc-ref %build-inputs "sqlite")))
3665 (list "--disable-docs"
3666 (string-append "--with-dbi-incdir=" libdbi "/include")
3667 (string-append "--with-dbi-libdir=" libdbi "/lib")
3669 (string-append "--with-mysql-incdir=" mysql:inc "/include/mysql")
3670 (string-append "--with-mysql-libdir=" mysql:lib "/lib")
3672 (string-append "--with-pgsql-incdir=" postgresql "/include")
3673 (string-append "--with-pgsql-libdir=" postgresql "/lib")
3675 (string-append "--with-sqlite-incdir=" sqlite "/include")
3676 (string-append "--with-sqlite-libdir=" sqlite "/lib")))
3678 (modify-phases %standard-phases
3679 (add-after 'unpack 'fix-tests
3680 (lambda* (#:key inputs #:allow-other-keys)
3681 (substitute* "tests/test_mysql.sh"
3683 (string-append "MYMYSQLD="
3684 (assoc-ref inputs "mariadb")
3687 (add-after 'install 'remove-empty-directories
3688 (lambda* (#:key outputs #:allow-other-keys)
3689 (let ((var (string-append (assoc-ref outputs "out") "/var")))
3690 (delete-file-recursively var))
3692 (synopsis "Database drivers for the libdbi framework")
3694 "The @code{libdbi-drivers} library provides the database specific drivers
3695 for the @code{libdbi} framework.
3697 The drivers officially supported by @code{libdbi} are:
3703 (home-page "http://libdbi-drivers.sourceforge.net/")
3704 (license license:lgpl2.1+)))
3713 (url "https://github.com/SOCI/soci/")
3715 (file-name (git-file-name name version))
3718 "06faswdxd2frqr9xnx6bxc7zwarlzsbdi3bqpz7kwdxsjvq41rnb"))))
3719 (build-system cmake-build-system)
3721 `(("postgresql" ,postgresql)
3725 ("mariadb:dev" ,mariadb "dev")
3726 ("mariadb:lib" ,mariadb "lib")))
3728 `(#:tests? #f ; Tests may require running database management systems.
3730 (modify-phases %standard-phases
3731 (add-after 'unpack 'fix-lib-path
3733 (substitute* "CMakeLists.txt"
3734 (("set\\(SOCI_LIBDIR \"lib64\"\\)") ""))
3736 (synopsis "C++ Database Access Library")
3738 "SOCI is an abstraction layer for several database backends, including
3739 PostreSQL, SQLite, ODBC and MySQL.")
3740 (home-page "http://soci.sourceforge.net/")
3741 (license license:boost1.0)))