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Merge branch 'master' into staging
[jackhill/guix/guix.git] / gnu / packages / databases.scm
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5f96f303 1;;; GNU Guix --- Functional package management for GNU
189be331 2;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2018 Ludovic Courtès <ludo@gnu.org>
a8714bf6
RW		 3;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr>
4;;; Copyright © 2013, 2017 Cyril Roelandt <tipecaml@gmail.com>
218a2106 5;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org>
b9ed5ef3 6;;; Copyright © 2014, 2015, 2016, 2018 Mark H Weaver <mhw@netris.org>
a8714bf6 7;;; Copyright © 2014, 2015 Eric Bavier <bavier@member.fsf.org>
da1f7a9e 8;;; Copyright © 2015, 2016 Sou Bunnbu <iyzsong@gmail.com>
b747a9db 9;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
a8714bf6
RW		 10;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
11;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
12;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org>
9930beb8 13;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
3c986a7d 14;;; Copyright © 2016, 2017 Nikita <nikita@n0.is>
6d09a7b5 15;;; Copyright © 2016, 2017, 2018 Roel Janssen <roel@gnu.org>
0e1b262e 16;;; Copyright © 2016 David Craven <david@craven.ch>
fe71eee0 17;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
62ea44fc 18;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca>
a8714bf6 19;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org>
51d42caa 20;;; Copyright © 2016, 2017, 2018, 2019, 2020 Marius Bakke <mbakke@fastmail.com>
c336567d 21;;; Copyright © 2017, 2018 Julien Lepiller <julien@lepiller.eu>
7dc0f1d5 22;;; Copyright © 2017, 2020 Thomas Danckaert <post@thomasdanckaert.be>
a8714bf6
RW		 23;;; Copyright © 2017 Jelle Licht <jlicht@fsfe.org>
24;;; Copyright © 2017 Adriano Peluso <catonano@gmail.com>
d39a84e8 25;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
a8fa39cd 26;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
38abef12 27;;; Copyright © 2017, 2018 Alex Vong <alexvong1995@gmail.com>
19601e89 28;;; Copyright © 2017, 2018 Ben Woodcroft <donttrustben@gmail.com>
231123ee 29;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
7bcc3405 30;;; Copyright © 2017, 2018 Pierre Langlois <pierre.langlois@gmx.com>
e58d3a59 31;;; Copyright © 2015, 2017, 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
16973071 32;;; Copyright © 2017 Kristofer Buffington <kristoferbuffington@gmail.com>
3926a099 33;;; Copyright © 2018 Amirouche Boubekki <amirouche@hypermove.net>
dae7661a 34;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
da602679 35;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com>
9df78675 36;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us>
a3abc3fd 37;;; Copyright © 2019 Alex Griffin <a@ajgrf.com>
91477def 38;;; Copyright © 2019 Gábor Boskovits <boskovits@gmail.com>
450d5dc2 39;;; Copyright © 2019 Pierre Langlois <pierre.langlois@gmx.com>
ae8a0184 40;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
2072bc08 41;;; Copyright © 2020 Pierre Neidhardt <mail@ambrevar.xyz>
659bc436 42;;; Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
1655e7be 43;;; Copyright © 2020 Tanguy Le Carrour <tanguy@bioneland.org>
ba0b249d 44;;; Copyright © 2020 Lars-Dominik Braun <ldb@leibniz-psychology.org>
5f96f303
LC		 45;;;
46;;; This file is part of GNU Guix.
47;;;
48;;; GNU Guix is free software; you can redistribute it and/or modify it
49;;; under the terms of the GNU General Public License as published by
50;;; the Free Software Foundation; either version 3 of the License, or (at
51;;; your option) any later version.
52;;;
53;;; GNU Guix is distributed in the hope that it will be useful, but
54;;; WITHOUT ANY WARRANTY; without even the implied warranty of
55;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
56;;; GNU General Public License for more details.
57;;;
58;;; You should have received a copy of the GNU General Public License
59;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
60
61(define-module (gnu packages databases)
62 #:use-module (gnu packages)
58071723 63 #:use-module (gnu packages admin)
06a035db 64 #:use-module (gnu packages algebra)
4c6aa73b
RJ		 65 #:use-module (gnu packages autotools)
66 #:use-module (gnu packages avahi)
77e52190 67 #:use-module (gnu packages base)
b747a9db 68 #:use-module (gnu packages bash)
06a035db 69 #:use-module (gnu packages bison)
23bbd7dd 70 #:use-module (gnu packages boost)
06a035db 71 #:use-module (gnu packages check)
dae7661a 72 #:use-module (gnu packages cmake)
06a035db 73 #:use-module (gnu packages compression)
62ea44fc 74 #:use-module (gnu packages crypto)
06a035db
MB		 75 #:use-module (gnu packages curl)
76 #:use-module (gnu packages cyrus-sasl)
255d1bbe 77 #:use-module (gnu packages dbm)
06a035db 78 #:use-module (gnu packages emacs)
da602679 79 #:use-module (gnu packages flex)
2fa55c72 80 #:use-module (gnu packages gcc)
4c6aa73b
RJ		 81 #:use-module (gnu packages gettext)
82 #:use-module (gnu packages glib)
06a035db 83 #:use-module (gnu packages gnupg)
16973071 84 #:use-module (gnu packages guile)
da1f7a9e 85 #:use-module (gnu packages time)
33c88fcb 86 #:use-module (gnu packages golang)
06a035db 87 #:use-module (gnu packages jemalloc)
708155df 88 #:use-module (gnu packages language)
686144e9 89 #:use-module (gnu packages libevent)
5f96f303 90 #:use-module (gnu packages linux)
d39a84e8 91 #:use-module (gnu packages man)
5f96f303 92 #:use-module (gnu packages ncurses)
aace6f6d 93 #:use-module (gnu packages onc-rpc)
d3c6ad0a 94 #:use-module (gnu packages parallel)
77631745 95 #:use-module (gnu packages pcre)
06a035db 96 #:use-module (gnu packages perl)
5ccde207 97 #:use-module (gnu packages perl-check)
cabe8f18 98 #:use-module (gnu packages perl-web)
4c6aa73b 99 #:use-module (gnu packages pkg-config)
d3c6ad0a 100 #:use-module (gnu packages popt)
06a035db 101 #:use-module (gnu packages python)
9763102b 102 #:use-module (gnu packages python-crypto)
450d5dc2 103 #:use-module (gnu packages python-web)
312ec128 104 #:use-module (gnu packages python-science)
44d10b1f 105 #:use-module (gnu packages python-xyz)
4c6aa73b 106 #:use-module (gnu packages rdf)
06a035db 107 #:use-module (gnu packages readline)
afcbb020 108 #:use-module (gnu packages ruby)
6bbbca90 109 #:use-module (gnu packages serialization)
9d0c291e 110 #:use-module (gnu packages sphinx)
cd0322a3 111 #:use-module (gnu packages sqlite)
06a035db 112 #:use-module (gnu packages tcl)
33c88fcb
CB		 113 #:use-module (gnu packages terminals)
114 #:use-module (gnu packages textutils)
06a035db 115 #:use-module (gnu packages tls)
6bbbca90 116 #:use-module (gnu packages valgrind)
dae7661a 117 #:use-module (gnu packages web)
77631745 118 #:use-module (gnu packages xml)
0e1b262e 119 #:use-module ((guix licenses) #:prefix license:)
5f96f303
LC		 120 #:use-module (guix packages)
121 #:use-module (guix download)
da602679 122 #:use-module (guix bzr-download)
16973071 123 #:use-module (guix git-download)
9df78675 124 #:use-module (guix build-system emacs)
5f96f303 125 #:use-module (guix build-system gnu)
58071723 126 #:use-module (guix build-system go)
274da61d 127 #:use-module (guix build-system perl)
4d98bfaf 128 #:use-module (guix build-system python)
afcbb020 129 #:use-module (guix build-system ruby)
77631745 130 #:use-module (guix build-system cmake)
6e385b76 131 #:use-module (guix build-system scons)
9077cf68 132 #:use-module (guix build-system trivial)
329d13b8 133 #:use-module (guix utils)
29cfbfca 134 #:use-module (srfi srfi-1)
5f96f303
LC		 135 #:use-module (srfi srfi-26)
136 #:use-module (ice-9 match))
137
4c6aa73b
RJ		 138(define-public 4store
139 (package
140 (name "4store")
141 (version "1.1.6")
142 (source (origin
50e20b8f
EF		 143 (method git-fetch)
144 (uri (git-reference
145 (url "https://github.com/4store/4store.git")
146 (commit (string-append "v" version))))
147 (file-name (git-file-name name version))
4c6aa73b 148 (sha256
50e20b8f 149 (base32 "1kzdfmwpzy64cgqlkcz5v4klwx99w0jk7afckyf7yqbqb4rydmpk"))
ea09f99f
RJ		 150 (patches (search-patches "4store-unset-preprocessor-directive.patch"
151 "4store-fix-buildsystem.patch"))))
4c6aa73b
RJ		 152 (build-system gnu-build-system)
153 (native-inputs
154 `(("perl" ,perl)
155 ("python" ,python-2)
156 ("autoconf" ,autoconf)
157 ("automake" ,automake)
b94a6ca0 158 ("gettext" ,gettext-minimal)
4c6aa73b 159 ("libtool" ,libtool)
74c8b174 160 ("pcre" ,pcre "bin") ;for 'pcre-config'
4c6aa73b
RJ		 161 ("pkg-config" ,pkg-config)))
162 (inputs
163 `(("glib" ,glib)
164 ("rasqal" ,rasqal)
165 ("libxml2" ,libxml2)
166 ("raptor2" ,raptor2)
167 ("readline" ,readline)
168 ("avahi" ,avahi)
4c6aa73b
RJ		 169 ("cyrus-sasl" ,cyrus-sasl)
170 ("openssl" ,openssl)
bb93042c 171 ("util-linux" ,util-linux "lib")))
4c6aa73b 172 ;; http://www.4store.org has been down for a while now.
bbf9092b 173 (home-page "https://github.com/4store/4store")
4c6aa73b
RJ		 174 (synopsis "Clustered RDF storage and query engine")
175 (description "4store is a RDF/SPARQL store written in C, supporting
176either single machines or networked clusters.")
ba8b9f8d 177 (license license:gpl3+)))
4c6aa73b 178
58071723
CB		 179(define-public go-gopkg.in-mgo.v2
180 (package
181 (name "go-gopkg.in-mgo.v2")
182 (version "2016.08.01")
183 (source (origin
184 (method git-fetch)
185 (uri (git-reference
186 (url "https://github.com/go-mgo/mgo")
187 (commit (string-append "r" version))))
188 (file-name (git-file-name name version))
189 (sha256
190 (base32
191 "0rwbi1z63w43b0z9srm8m7iz1fdwx7bq7n2mz862d6liiaqa59jd"))))
192 (build-system go-build-system)
193 (arguments
194 `(#:import-path "gopkg.in/mgo.v2"
195 ;; TODO: The tests fail as MongoDB fails to start
196 ;; Error parsing command line: unrecognised option '--chunkSize'
197 #:tests? #f
198 #:phases
199 (modify-phases %standard-phases
200 (delete 'reset-gzip-timestamps)
201 (add-before 'check 'start-mongodb
202 (lambda* (#:key tests? #:allow-other-keys)
96272e28
MW		 203 (when tests?
204 (with-directory-excursion "src/gopkg.in/mgo.v2"
205 (invoke "make" "startdb")))
206 #t))
58071723
CB		 207 (add-after 'check 'stop'mongodb
208 (lambda* (#:key tests? #:allow-other-keys)
96272e28
MW		 209 (when tests?
210 (with-directory-excursion "src/gopkg.in/mgo.v2"
211 (invoke "make" "stopdb")))
212 #t)))))
58071723
CB		 213 (native-inputs
214 `(("go-gopkg.in-check.v1" ,go-gopkg.in-check.v1)
215 ("mongodb" ,mongodb)
216 ("daemontools" ,daemontools)))
217 (synopsis "@code{mgo} offers a rich MongoDB driver for Go.")
218 (description
219 "@code{mgo} (pronounced as mango) is a MongoDB driver for the Go language.
220It implements a rich selection of features under a simple API following
221standard Go idioms.")
de1d778e 222 (home-page "https://labix.org/mgo")
58071723
CB		 223 (license license:bsd-2)))
224
6fc03fcc
CB		 225(define-public ephemeralpg
226 (package
227 (name "ephemeralpg")
6c54d06e 228 (version "3.0")
6fc03fcc
CB		 229 (source
230 (origin
231 (method url-fetch)
232 (uri (string-append
8e716256 233 "https://eradman.com/ephemeralpg/code/ephemeralpg-"
6fc03fcc
CB		 234 version ".tar.gz"))
235 (sha256
6c54d06e 236 (base32 "1j0g7g114ma7y7sadbng5p1ss1zsm9zpicm77qspym6565733vvh"))))
6fc03fcc
CB		 237 (build-system gnu-build-system)
238 (arguments
239 '(#:make-flags (list "CC=gcc"
240 (string-append "PREFIX=" %output))
241 #:phases
242 (modify-phases %standard-phases
6c54d06e 243 (delete 'configure) ; no configure script
6fc03fcc
CB		 244 (add-after 'install 'wrap
245 (lambda* (#:key inputs outputs #:allow-other-keys)
246 (let ((out (assoc-ref outputs "out")))
247 (wrap-program (string-append out "/bin/pg_tmp")
248 `("PATH" ":" prefix
249 (,(string-append (assoc-ref inputs "util-linux")
250 "/bin")
251 ,(string-append (assoc-ref inputs "postgresql")
252 "/bin")
fa8343de 253 ;; For getsocket.
6fc03fcc 254 ,(string-append out "/bin")))))
6c54d06e
TGR		 255 #t)))
256 #:test-target "test"))
6fc03fcc
CB		 257 (inputs
258 `(("postgresql" ,postgresql)
259 ("util-linux" ,util-linux)))
260 (native-inputs
6c54d06e 261 ;; For tests.
fa8343de
TGR		 262 `(("ruby" ,ruby)
263 ("which" ,which)))
8e716256 264 (home-page "https://eradman.com/ephemeralpg/")
6fc03fcc
CB		 265 (synopsis "Run temporary PostgreSQL databases")
266 (description
267 "@code{pg_tmp} creates temporary PostgreSQL databases, suitable for tasks
268like running software test suites. Temporary databases created with
269@code{pg_tmp} have a limited shared memory footprint and are automatically
270garbage-collected after a configurable number of seconds (the default is
27160).")
272 (license license:isc)))
273
afcbb020
CB		 274(define-public es-dump-restore
275 (package
276 (name "es-dump-restore")
277 (version "2.1.0")
278 (source
279 (origin
280 (method url-fetch)
281 (uri (rubygems-uri "es_dump_restore" version))
282 (sha256
283 (base32
284 "020yk7f1hw48clmf5501z3xv9shsdchyymcv0y2cci2c1xvr1mim"))))
285 (build-system ruby-build-system)
286 (arguments
0076f5a9 287 '(#:tests? #f)) ;; No testsuite.
afcbb020
CB		 288 (propagated-inputs
289 `(("ruby-httpclient" ,ruby-httpclient)
290 ("ruby-multi-json" ,ruby-multi-json)
291 ("ruby-progress_bar" ,ruby-progress_bar)
292 ("ruby-rubyzip" ,ruby-rubyzip)
293 ("ruby-thor" ,ruby-thor)))
294 (synopsis "Utility for dumping and restoring ElasticSearch indexes")
295 (description
296 "This package provides a utility for dumping the contents of an
297ElasticSearch index to a compressed file and restoring the dumpfile back to an
298ElasticSearch server")
299 (home-page "https://github.com/patientslikeme/es_dump_restore")
300 (license license:expat)))
301
b9f771a7
MB		 302(define-public leveldb
303 (package
304 (name "leveldb")
3a32be71 305 (version "1.22")
b9f771a7 306 (source (origin
ad7c77fd
MB		 307 (method git-fetch)
308 (uri (git-reference
309 (url "https://github.com/google/leveldb")
5cc013f0 310 (commit version)))
ad7c77fd 311 (file-name (git-file-name name version))
b9f771a7
MB		 312 (sha256
313 (base32
3a32be71 314 "0qrnhiyq7r4wa1a4wi82zgns35smj94mcjsc7kfs1k6ia9ys79z7"))))
5cc013f0 315 (build-system cmake-build-system)
b9f771a7 316 (arguments
5cc013f0 317 `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON" "-DLEVELDB_BUILD_TESTS=ON")))
b9f771a7
MB		 318 (inputs
319 `(("snappy" ,snappy)))
fd423e4d 320 (home-page "https://github.com/google/leveldb")
b9f771a7
MB		 321 (synopsis "Fast key-value storage library")
322 (description
323 "LevelDB is a fast key-value storage library that provides an ordered
324mapping from string keys to string values.")
ba8b9f8d 325 (license license:bsd-3)))
b9f771a7 326
686144e9
CB		 327(define-public memcached
328 (package
329 (name "memcached")
973218a3 330 (version "1.5.20")
686144e9
CB		 331 (source
332 (origin
333 (method url-fetch)
334 (uri (string-append
335 "https://memcached.org/files/memcached-" version ".tar.gz"))
336 (sha256
973218a3 337 (base32 "1r511qr95q0ywdaql3pdjiwzkfqxhhfzb13ilvl7mznfm4iv1myg"))))
686144e9
CB		 338 (build-system gnu-build-system)
339 (inputs
340 `(("libevent" ,libevent)
341 ("cyrus-sasl" ,cyrus-sasl)))
342 (home-page "https://memcached.org/")
61d996b9
TGR		 343 (synopsis "In-memory caching service")
344 (description "Memcached is an in-memory key-value store. It has a small
686144e9
CB		 345and generic API, and was originally intended for use with dynamic web
346applications.")
347 (license license:bsd-3)))
348
da602679
MC		 349(define-public libmemcached
350 (package
351 (name "libmemcached")
352 (version "1.0.18")
353 ;; We build from the sources since we want to build the extra HTML
354 ;; documentation which is not included with the release.
355 (source (origin
356 (method bzr-fetch)
357 (uri (bzr-reference
358 (url "lp:libmemcached/1.0")
359 (revision (string-append "tag:" version))))
360 (file-name (string-append name "-" version "-checkout"))
361 (sha256
362 (base32
737a3c12
TGR		 363 "1842s4dxdh21gdr46q4dgxigidcs6dkqnbnqjwb9l8r0bqx5nb10"))
364 (patches
365 (search-patches "libmemcached-build-with-gcc7.patch"))))
da602679
MC		 366 (build-system gnu-build-system)
367 (native-inputs
368 `(("memcached" ,memcached)
369 ("libtool" ,libtool)
370 ("autoconf" ,autoconf)
371 ("automake" ,automake)
372 ("bison" ,bison)
373 ("flex" ,flex)
374 ("perl" ,perl)
375 ("python-sphinx" ,python-sphinx))) ;to build the HTML doc.
376 (inputs
377 `(("libevent" ,libevent)
378 ("cyrus-sasl" ,cyrus-sasl)))
379 (outputs '("out" "doc"))
380 (arguments
381 '(#:phases
382 (modify-phases %standard-phases
383 (add-before 'bootstrap 'fix-configure.ac
384 ;; Move the AC_CONFIG_AUX_DIR macro use under AC_INIT, otherwise we
385 ;; get the error ``configure: error: cannot find install-sh,
386 ;; install.sh, or shtool in "." "./.." "./../.."`` (see:
387 ;; https://debbugs.gnu.org/cgi/bugreport.cgi?bug=19539 and
388 ;; https://bugs.launchpad.net/libmemcached/+bug/1803922).
389 (lambda _
390 (delete-file "bootstrap.sh") ;not useful in the context of Guix
391 (substitute* "configure.ac"
392 (("^AC_CONFIG_AUX_DIR\\(\\[build-aux\\]\\).*") "")
393 (("(^AC_INIT.*)" anchor)
394 (string-append anchor "AC_CONFIG_AUX_DIR([build-aux])\n")))
395 #t))
396 (add-before 'bootstrap 'disable-failing-tests
397 ;; See: https://bugs.launchpad.net/libmemcached/+bug/1803926
398 (lambda _
399 ;; Mark some heavily failing test suites as expected to fail.
400 (substitute* "Makefile.am"
401 (("(XFAIL_TESTS =[^\n]*)" xfail_tests)
402 (string-append xfail_tests " tests/testudp"
403 " tests/libmemcached-1.0/testapp"
404 " tests/libmemcached-1.0/testsocket")))
405 ;; Disable two tests of the unittest test suite.
406 (substitute* "libtest/unittest.cc"
407 ((".*echo_fubar_BINARY \\},.*") "")
408 ((".*application_doesnotexist_BINARY \\},.*") ""))
409 #t))
410 (add-after 'disable-dns-tests 'build-and-install-html-doc
411 (lambda* (#:key outputs #:allow-other-keys)
412 (let ((html (string-append (assoc-ref outputs "doc")
413 "/share/doc/libmemcached/html/")))
414 (invoke "make" "install-html")
415 ;; Cleanup useless files.
416 (for-each delete-file-recursively
417 (map (lambda (x) (string-append html x))
418 '("_sources" ".doctrees" ".buildinfo"))))
419 #t)))))
420 (home-page "https://libmemcached.org/")
421 (synopsis "C++ library for memcached")
422 (description "libMemcached is a library to use memcached in C/C++
423applications. It comes with a complete reference guide and documentation of
424the API, and provides features such as:
425@itemize
426@item Asynchronous and synchronous transport support
427@item Consistent hashing and distribution
428@item Tunable hashing algorithm to match keys
429@item Access to large object support
430@item Local replication
431@end itemize")
432 (license license:bsd-3)))
433
063edf92
MC		 434(define-public python-pylibmc
435 (package
436 (name "python-pylibmc")
79bc9176 437 (version "1.6.1")
063edf92
MC		 438 (source
439 (origin
440 (method url-fetch)
441 (uri (pypi-uri "pylibmc" version))
442 (sha256
79bc9176 443 (base32 "1sg7d9j0v6g3xg3finf4l1hb72c13vcyyi6rqrc9shbx903d93ca"))))
063edf92
MC		 444 (build-system python-build-system)
445 (arguments
446 '(#:phases
447 (modify-phases %standard-phases
448 (add-before 'check 'start-memcached-daemon
449 ;; The test suite requires a memcached server.
450 (lambda _
451 (invoke "memcached" "-d"))))))
452 (native-inputs
453 `(("memcached" ,memcached)
454 ("python-nose" ,python-nose)))
455 (inputs
456 `(("libmemcached" ,libmemcached)
457 ("zlib" ,zlib)
458 ("cyrus-sasl" ,cyrus-sasl)))
79bc9176
TGR		 459 (home-page "http://sendapatch.se/projects/pylibmc/")
460 (synopsis "Python client for memcached")
063edf92
MC		 461 (description
462 "@code{pylibmc} is a client in Python for memcached. It is a wrapper
463around TangentOrg’s libmemcached library, and can be used as a drop-in
464replacement for the code@{python-memcached} library.")
465 (license license:bsd-3)))
466
467(define-public python2-pylibmc
468 (package-with-python2 python-pylibmc))
469
6bbbca90
CB		 470(define-public mongodb
471 (package
472 (name "mongodb")
f1c49e75 473 (version "3.4.10")
6bbbca90
CB		 474 (source (origin
475 (method url-fetch)
476 (uri (string-append "https://github.com/mongodb/mongo/archive/r"
477 version ".tar.gz"))
478 (file-name (string-append name "-" version ".tar.gz"))
479 (sha256
f1c49e75 480 (base32 "0676lvkljj7a5hdhv78dbykqnqrj9lbn9799mi84b8vbnzsq961r"))
51b0f09e
EF		 481 (modules '((guix build utils)))
482 (snippet
483 '(begin
484 (for-each (lambda (dir)
485 (delete-file-recursively
486 (string-append "src/third_party/" dir)))
487 '("pcre-8.41" "scons-2.5.0" "snappy-1.1.3"
488 "valgrind-3.11.0" "wiredtiger"
6cbee49d
MW		 489 "yaml-cpp-0.5.3" "zlib-1.2.8"))
490 #t))
6bbbca90
CB		 491 (patches
492 (list
493 (search-patch "mongodb-support-unknown-linux-distributions.patch")))))
6e385b76 494 (build-system scons-build-system)
6bbbca90 495 (inputs
9d67480a 496 `(("openssl" ,openssl-1.0)
6bbbca90 497 ("pcre" ,pcre)
319b52c3
EF		 498 ,@(match (%current-system)
499 ((or "x86_64-linux" "aarch64-linux" "mips64el-linux")
500 `(("wiredtiger" ,wiredtiger)))
501 (_ `()))
6bbbca90
CB		 502 ("yaml-cpp" ,yaml-cpp)
503 ("zlib" ,zlib)
51b0f09e 504 ("snappy" ,snappy)))
6bbbca90 505 (native-inputs
6e385b76 506 `(("valgrind" ,valgrind)
90205b62 507 ("perl" ,perl)
61506fe5 508 ("python" ,python-2)
90205b62
CB		 509 ("python2-pymongo" ,python2-pymongo)
510 ("python2-pyyaml" ,python2-pyyaml)
5a8ef3c1 511 ("tzdata" ,tzdata-for-tests)))
6bbbca90 512 (arguments
6e385b76
AI		 513 `(#:scons ,scons-python2
514 #:phases
6bbbca90
CB		 515 (let ((common-options
516 `(;; "--use-system-tcmalloc" TODO: Missing gperftools
517 "--use-system-pcre"
29cfbfca
EF		 518 ;; wiredtiger is 64-bit only
519 ,,(if (any (cute string-prefix? <> (or (%current-target-system)
520 (%current-system)))
521 '("i686-linux" "armhf-linux"))
522 ``"--wiredtiger=off"
319b52c3 523 ``"--use-system-wiredtiger")
6bbbca90
CB		 524 ;; TODO
525 ;; build/opt/mongo/db/fts/unicode/string.o failed: Error 1
526 ;; --use-system-boost
527 "--use-system-snappy"
528 "--use-system-zlib"
529 "--use-system-valgrind"
530 ;; "--use-system-stemmer" TODO: Missing relevant package
531 "--use-system-yaml"
532 "--disable-warnings-as-errors"
533 ,(format #f "--jobs=~a" (parallel-job-count))
534 "--ssl")))
535 (modify-phases %standard-phases
9d67480a
CB		 536 (add-after 'unpack 'patch
537 (lambda _
538 ;; Remove use of GNU extensions in parse_number_test.cpp, to
539 ;; allow compiling with GCC 7 or later
540 ;; https://jira.mongodb.org/browse/SERVER-28063
541 (substitute* "src/mongo/base/parse_number_test.cpp"
542 (("0xabcab\\.defdefP-10")
543 "687.16784283419838"))
544 #t))
6bbbca90
CB		 545 (add-after 'unpack 'scons-propagate-environment
546 (lambda _
547 ;; Modify the SConstruct file to arrange for
548 ;; environment variables to be propagated.
549 (substitute* "SConstruct"
550 (("^env = Environment\\(")
551 "env = Environment(ENV=os.environ, "))
552 #t))
553 (add-after 'unpack 'create-version-file
554 (lambda _
555 (call-with-output-file "version.json"
556 (lambda (port)
557 (display ,(simple-format #f "{
558 \"version\": \"~A\"
559}" version) port)))
560 #t))
561 (replace 'build
562 (lambda _
d9bcdfce 563 (apply invoke `("scons"
6bbbca90 564 ,@common-options
d9bcdfce 565 "mongod" "mongo" "mongos"))))
6bbbca90 566 (replace 'check
90205b62
CB		 567 (lambda* (#:key tests? inputs #:allow-other-keys)
568 (setenv "TZDIR"
569 (string-append (assoc-ref inputs "tzdata")
570 "/share/zoneinfo"))
96272e28
MW		 571 (when tests?
572 ;; Note that with the tests, especially the unittests, the
573 ;; build can take up to ~45GB of space, as many tests are
574 ;; individual executable files, with some being hundreds of
575 ;; megabytes in size.
576 (apply invoke `("scons" ,@common-options "dbtest" "unittests"))
577 (substitute* "build/unittests.txt"
578 ;; TODO: Don't run the async_stream_test, as it hangs
579 (("^build\\/opt\\/mongo\\/executor\\/async\\_stream\\_test\n$")
580 "")
581 ;; TODO: This test fails
582 ;; Expected 0UL != disks.size() (0 != 0) @src/mongo/util/procparser_test.cpp:476
583 (("^build\\/opt\\/mongo\\/util\\/procparser\\_test\n$")
584 ""))
585 (invoke "python" "buildscripts/resmoke.py"
586 "--suites=dbtest,unittests"
587 (format #f "--jobs=~a" (parallel-job-count))))
588 #t))
6bbbca90 589 (replace 'install
96272e28
MW		 590 (lambda* (#:key outputs #:allow-other-keys)
591 (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
6bbbca90
CB		 592 (install-file "mongod" bin)
593 (install-file "mongos" bin)
594 (install-file "mongo" bin))
595 #t))))))
596 (home-page "https://www.mongodb.org/")
597 (synopsis "High performance and high availability document database")
598 (description
599 "Mongo is a high-performance, high availability, schema-free
600document-oriented database. A key goal of MongoDB is to bridge the gap
601between key/value stores (which are fast and highly scalable) and traditional
602RDBMS systems (which are deep in functionality).")
603 (license (list license:agpl3
604 ;; Some parts are licensed under the Apache License
605 license:asl2.0))))
606
7cbf06d8
TGR		 607;; XXX When updating, check whether boost-for-mysql is still needed.
608;; It might suffice to patch ‘cmake/boost.cmake’ as done in the past.
5f96f303
LC		 609(define-public mysql
610 (package
611 (name "mysql")
aace6f6d 612 (version "5.7.27")
5f96f303
LC		 613 (source (origin
614 (method url-fetch)
23bbd7dd 615 (uri (list (string-append
7fe3a57a 616 "https://dev.mysql.com/get/Downloads/MySQL-"
23bbd7dd
EF		 617 (version-major+minor version) "/"
618 name "-" version ".tar.gz")
619 (string-append
7fe3a57a 620 "https://downloads.mysql.com/archives/get/file/"
23bbd7dd 621 name "-" version ".tar.gz")))
5f96f303
LC		 622 (sha256
623 (base32
aace6f6d 624 "1fhv16zr46pxm1j8vb8x8mh3nwzglg01arz8gnazbmjqldr5idpq"))))
329d13b8
SB		 625 (build-system cmake-build-system)
626 (arguments
69419655 627 `(#:configure-flags
329d13b8
SB		 628 '("-DBUILD_CONFIG=mysql_release"
629 "-DWITH_SSL=system"
630 "-DWITH_ZLIB=system"
631 "-DDEFAULT_CHARSET=utf8"
632 "-DDEFAULT_COLLATION=utf8_general_ci"
633 "-DMYSQL_DATADIR=/var/lib/mysql"
634 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
635 "-DINSTALL_INFODIR=share/mysql/docs"
636 "-DINSTALL_MANDIR=share/man"
637 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
638 "-DINSTALL_SCRIPTDIR=bin"
639 "-DINSTALL_INCLUDEDIR=include/mysql"
640 "-DINSTALL_DOCREADMEDIR=share/mysql/docs"
641 "-DINSTALL_SUPPORTFILESDIR=share/mysql"
642 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
643 "-DINSTALL_DOCDIR=share/mysql/docs"
644 "-DINSTALL_SHAREDIR=share/mysql"
645 ;; Get rid of test data.
646 "-DINSTALL_MYSQLTESTDIR="
3f289db6
LC		 647 "-DINSTALL_SQLBENCHDIR=")
648 #:phases (modify-phases %standard-phases
6a52df50
LC		 649 (add-after
650 'install 'remove-extra-binaries
651 (lambda* (#:key outputs #:allow-other-keys)
652 (let ((out (assoc-ref outputs "out")))
653 ;; Remove the 3 *_embedded files, which weigh in at
654 ;; 14 MiB each.
655 (for-each delete-file
656 (find-files (string-append out "/bin")
657 "_embedded$"))
7d099cbe 658 #t))))))
329d13b8
SB		 659 (native-inputs
660 `(("bison" ,bison)
aace6f6d
EF		 661 ("perl" ,perl)
662 ("pkg-config" ,pkg-config)))
5f96f303 663 (inputs
7cbf06d8 664 `(("boost" ,boost-for-mysql)
23bbd7dd 665 ("libaio" ,libaio)
aace6f6d 666 ("libtirpc" ,libtirpc)
23bbd7dd 667 ("ncurses" ,ncurses)
5f96f303 668 ("openssl" ,openssl)
aace6f6d 669 ("rpcsvc-proto" ,rpcsvc-proto) ; rpcgen
23bbd7dd 670 ("zlib" ,zlib)))
7fe3a57a 671 (home-page "https://www.mysql.com/")
9e771e3b 672 (synopsis "Fast, easy to use, and popular database")
5f96f303
LC		 673 (description
674 "MySQL is a fast, reliable, and easy to use relational database
675management system that supports the standardized Structured Query
676Language.")
ba8b9f8d 677 (license license:gpl2)))
5f96f303 678
77631745
SB		 679(define-public mariadb
680 (package
681 (name "mariadb")
e24e345c 682 (version "10.1.45")
77631745
SB		 683 (source (origin
684 (method url-fetch)
cc3c5fc5
MB		 685 (uri (string-append "https://downloads.mariadb.com/MariaDB"
686 "/mariadb-" version "/source/mariadb-"
687 version ".tar.gz"))
77631745
SB		 688 (sha256
689 (base32
e24e345c 690 "1mfs0x4c0z7d306n128dxdawk3llk25vxif5zwl20fv1z5qhz3wx"))
fb76ef84 691 (patches (search-patches "mariadb-client-test-32bit.patch"))
2001d2da
MB		 692 (modules '((guix build utils)))
693 (snippet
694 '(begin
695 ;; Delete bundled snappy and xz.
696 (delete-file-recursively "storage/tokudb/PerconaFT/third_party")
4333d48a
MB		 697 (substitute* "storage/tokudb/PerconaFT/CMakeLists.txt"
698 ;; This file checks that the bundled sources are present and
699 ;; declares build procedures for them.
700 (("^include\\(TokuThirdParty\\)") ""))
701 (substitute* "storage/tokudb/PerconaFT/ft/CMakeLists.txt"
702 ;; Don't attempt to use the procedures we just removed.
703 ((" build_lzma build_snappy") ""))
2001d2da
MB		 704
705 ;; Preserve CMakeLists.txt for these.
706 (for-each (lambda (file)
707 (unless (string-suffix? "CMakeLists.txt" file)
708 (delete-file file)))
709 (append (find-files "extra/yassl")
710 (find-files "pcre") (find-files "zlib")))
711 #t))))
77631745 712 (build-system cmake-build-system)
2b8491fb 713 (outputs '("out" "lib" "dev"))
77631745 714 (arguments
5193ae64 715 `(#:configure-flags
2b8491fb
JL		 716 (list
717 "-DBUILD_CONFIG=mysql_release"
6cf8e576
LF		 718 ;; Linking with libarchive fails, like this:
719
720 ;; ld: /gnu/store/...-libarchive-3.2.2/lib/libarchive.a(archive_entry.o):
721 ;; relocation R_X86_64_32 against `.bss' can not be used when
722 ;; making a shared object; recompile with -fPIC
723
724 ;; For now, disable the features that that use libarchive (xtrabackup).
725 "-DWITH_LIBARCHIVE=OFF"
726
bba7a77e
MB		 727 ;; Disable the TokuDB engine, because its test suite frequently fails,
728 ;; and loading it crashes the server: <https://bugs.gnu.org/35521>.
729 "-DTOKUDB_OK=OFF"
730
2001d2da
MB		 731 ;; Ensure the system libraries are used.
732 "-DWITH_JEMALLOC=yes"
733 "-DWITH_PCRE=system"
734 "-DWITH_SSL=system"
735 "-DWITH_ZLIB=system"
736
77631745
SB		 737 "-DDEFAULT_CHARSET=utf8"
738 "-DDEFAULT_COLLATION=utf8_general_ci"
739 "-DMYSQL_DATADIR=/var/lib/mysql"
740 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
2b8491fb
JL		 741 (string-append "-DCMAKE_INSTALL_PREFIX=" (assoc-ref %outputs "lib"))
742 (string-append "-DCMAKE_INSTALL_RPATH=" (assoc-ref %outputs "lib")
743 "/lib")
744 (string-append "-DINSTALL_INFODIR=" (assoc-ref %outputs "out")
745 "/share/mysql/docs")
746 (string-append "-DINSTALL_MANDIR=" (assoc-ref %outputs "out")
747 "/share/man")
748 (string-append "-DINSTALL_SCRIPTDIR=" (assoc-ref %outputs "out") "/bin")
749 (string-append "-DINSTALL_BINDIR=" (assoc-ref %outputs "out") "/bin")
750 "-DCMAKE_INSTALL_LIBDIR=lib"
77631745 751 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
2b8491fb
JL		 752 (string-append "-DINSTALL_INCLUDEDIR=" (assoc-ref %outputs "dev")
753 "/include/mysql")
754 (string-append "-DINSTALL_DOCREADMEDIR=" (assoc-ref %outputs "out")
755 "/share/mysql/docs")
756 (string-append "-DINSTALL_DOCDIR=" (assoc-ref %outputs "out")
757 "/share/mysql/docs")
758 (string-append "-DINSTALL_SUPPORTFILESDIR=" (assoc-ref %outputs "out")
759 "/share/mysql/support-files")
77631745 760 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
4c27ea06 761 "-DINSTALL_SHAREDIR=share")
77631745
SB		 762 #:phases
763 (modify-phases %standard-phases
b859a1bf
MB		 764 ,@(if (string-prefix? "arm" (%current-system))
765 ;; XXX: Because of the GCC 5 input, we need to hide GCC 7 from
766 ;; CPLUS_INCLUDE_PATH so that its headers do not shadow GCC 5.
767 '((add-after 'set-paths 'hide-default-gcc
768 (lambda* (#:key inputs #:allow-other-keys)
769 (let ((gcc (assoc-ref inputs "gcc")))
770 (setenv "CPLUS_INCLUDE_PATH"
771 (string-join
772 (delete (string-append gcc "/include/c++")
773 (string-split (getenv "CPLUS_INCLUDE_PATH")
774 #\:))
775 ":"))
776 #t))))
777 '())
4333d48a 778 (add-after 'unpack 'fix-pcre-detection
2001d2da
MB		 779 (lambda _
780 ;; The bundled PCRE in MariaDB has a patch that was upstreamed
781 ;; in version 8.34. Unfortunately the upstream patch behaves
782 ;; slightly differently and the build system fails to detect it.
783 ;; See <https://bugs.exim.org/show_bug.cgi?id=2173>.
784 ;; XXX: Consider patching PCRE instead.
785 (substitute* "cmake/pcre.cmake"
786 ((" OR NOT PCRE_STACK_SIZE_OK") ""))
2001d2da 787 #t))
3869f39e
MB		 788 (add-after 'unpack 'adjust-tests
789 (lambda _
790 (let ((disabled-tests
791 '(;; These fail because root@hostname == root@localhost in
792 ;; the build environment, causing a user count mismatch.
793 ;; See <https://jira.mariadb.org/browse/MDEV-7761>.
794 "main.join_cache"
795 "main.explain_non_select"
e313327e 796 "main.stat_tables"
1d957c79 797 "main.stat_tables_innodb"
3418e43b 798 "roles.acl_statistics"
69fb26d4
MB		 799
800 ;; This file contains a time bomb which makes it fail after
0ce64334 801 ;; 2030-12-31. See <https://bugs.gnu.org/34351> for details.
38f77be4 802 "main.mysqldump"
69fb26d4 803
3418e43b
MB		 804 ;; FIXME: This test fails on i686:
805 ;; -myisampack: Can't create/write to file (Errcode: 17 "File exists")
806 ;; +myisampack: Can't create/write to file (Errcode: 17 "File exists)
807 ;; When running "myisampack --join=foo/t3 foo/t1 foo/t2"
808 ;; (all three tables must exist and be identical)
809 ;; in a loop it produces the same error around 1/240 times.
810 ;; montywi on #maria suggested removing the real_end check in
811 ;; "strings/my_vsnprintf.c" on line 503, yet it still does not
812 ;; reach the ending quote occasionally. Disable it for now.
62694caa
EF		 813 "main.myisampack"
814 ;; FIXME: This test fails on armhf-linux:
815 "mroonga/storage.index_read_multiple_double"))
3869f39e
MB		 816
817 ;; This file contains a list of known-flaky tests for this
818 ;; release. Append our own items.
819 (unstable-tests (open-file "mysql-test/unstable-tests" "a")))
820 (for-each (lambda (test)
821 (format unstable-tests "~a : ~a\n"
822 test "Disabled in Guix"))
823 disabled-tests)
824 (close-port unstable-tests)
825
ab0cb26f
MB		 826 ;; XXX: This test fails because it expects a latin1 charset and
827 ;; collation. See <https://jira.mariadb.org/browse/MDEV-21264>.
828 (substitute* "mysql-test/r/gis_notembedded.result"
829 (("latin1_swedish_ci") "utf8_general_ci")
830 (("\tlatin1") "\tutf8"))
831
e313327e
MB		 832 (substitute* "mysql-test/suite/binlog/t/binlog_mysqlbinlog_stop_never.test"
833 (("/bin/bash")
834 (which "bash")))
835
3869f39e
MB		 836 (substitute* "mysql-test/mysql-test-run.pl"
837 (("/bin/ls") (which "ls"))
838 (("/bin/sh") (which "sh")))
839 #t)))
5b4d2e40
MB		 840 (add-before 'configure 'disable-plugins
841 (lambda _
842 (let ((disable-plugin (lambda (name)
843 (call-with-output-file
844 (string-append "plugin/" name
845 "/CMakeLists.txt")
846 (lambda (port)
847 (format port "\n")))))
03335824 848 (disabled-plugins '(;; XXX: Causes a test failure.
3869f39e 849 "disks")))
5b4d2e40
MB		 850 (for-each disable-plugin disabled-plugins)
851 #t)))
3869f39e
MB		 852 (replace 'check
853 (lambda* (#:key (tests? #t) #:allow-other-keys)
854 (if tests?
855 (with-directory-excursion "mysql-test"
856 (invoke "./mtr" "--verbose"
3418e43b 857 "--retry=3"
71179b35
MB		 858 "--testcase-timeout=40"
859 "--suite-timeout=600"
3869f39e
MB		 860 "--parallel" (number->string (parallel-job-count))
861 "--skip-test-list=unstable-tests"))
862 (format #t "test suite not run~%"))
863 #t))
77631745
SB		 864 (add-after
865 'install 'post-install
939c5b2c 866 (lambda* (#:key inputs outputs #:allow-other-keys)
77631745 867 (let* ((out (assoc-ref outputs "out"))
2b8491fb 868 (dev (assoc-ref outputs "dev"))
939c5b2c
MB		 869 (lib (assoc-ref outputs "lib"))
870 (openssl (assoc-ref inputs "openssl")))
77631745
SB		 871 (substitute* (string-append out "/bin/mysql_install_db")
872 (("basedir=\"\"")
873 (string-append "basedir=\"" out "\"")))
874 ;; Remove unneeded files for testing.
2b8491fb 875 (with-directory-excursion lib
77631745 876 (for-each delete-file-recursively
2b8491fb 877 '("data" "mysql-test" "sql-bench"))
963157f1
MB		 878 ;; And static libraries.
879 (for-each delete-file (find-files "lib" "\\.a$")))
2b8491fb
JL		 880 (with-directory-excursion out
881 (delete-file "share/man/man1/mysql-test-run.pl.1")
882 ;; Delete huge and unnecessary executables.
883 (for-each delete-file (find-files "bin" "(test|embedded)")))
884 (mkdir-p (string-append dev "/share"))
885 (mkdir-p (string-append dev "/bin"))
886 (rename-file (string-append lib "/bin/mysqld")
887 (string-append out "/bin/mysqld"))
888 (rename-file (string-append lib "/share/pkgconfig")
889 (string-append dev "/share/pkgconfig"))
890 (rename-file (string-append out "/bin/mysql_config")
891 (string-append dev "/bin/mysql_config"))
939c5b2c 892
ca69163c
MB		 893
894 (substitute* (string-append out "/bin/mysql_install_db")
895 (("\\$basedir/share/mysql")
896 (string-append lib "/share/mysql")))
897
939c5b2c
MB		 898 ;; Embed an absolute reference to OpenSSL in mysql_config
899 ;; and the pkg-config file to avoid propagation.
900 (substitute* (list (string-append dev "/bin/mysql_config")
901 (string-append dev "/share/pkgconfig/mariadb.pc"))
902 (("-lssl -lcrypto" all)
903 (string-append "-L" openssl "/lib " all)))
904
841ee2a8 905 #t))))))
77631745
SB		 906 (native-inputs
907 `(("bison" ,bison)
2fa55c72
MB		 908 ;; XXX: On armhf, use GCC 5 to work around <https://bugs.gnu.org/37605>.
909 ,@(if (string-prefix? "armhf" (%current-system))
b859a1bf 910 `(("gcc@5", gcc-5))
2fa55c72 911 '())
03335824 912 ("perl" ,perl)))
77631745
SB		 913 (inputs
914 `(("jemalloc" ,jemalloc)
915 ("libaio" ,libaio)
916 ("libxml2" ,libxml2)
917 ("ncurses" ,ncurses)
939c5b2c 918 ("openssl" ,openssl-1.0)
ab0cb26f 919 ("pam" ,linux-pam)
77631745 920 ("pcre" ,pcre)
2001d2da 921 ("xz" ,xz)
77631745 922 ("zlib" ,zlib)))
3869f39e
MB		 923 ;; The test suite is very resource intensive and can take more than three
924 ;; hours on a x86_64 system. Give slow and busy machines some leeway.
925 (properties '((timeout . 64800))) ;18 hours
77631745
SB		 926 (home-page "https://mariadb.org/")
927 (synopsis "SQL database server")
928 (description
929 "MariaDB is a multi-user and multi-threaded SQL database server, designed
930as a drop-in replacement of MySQL.")
ba8b9f8d 931 (license license:gpl2)))
77631745 932
2072bc08
PN		 933(define-public mariadb-connector-c
934 (package
935 (name "mariadb-connector-c")
936 (version "3.1.6")
937 (source (origin
938 (method url-fetch)
939 (uri (string-append
940 "https://downloads.mariadb.org/f/connector-c-"
941 version "/mariadb-connector-c-"
942 version "-src.tar.gz"))
943 (sha256
944 (base32
945 "083724f5daaqyzdcx508caz6fk2hs89jff85zg28ih43vxkvnrnj"))))
9077cf68 946 (inputs
2072bc08
PN		 947 `(("openssl" ,openssl)))
948 (build-system cmake-build-system)
9077cf68 949 (arguments
2072bc08
PN		 950 ;; No tests.
951 '(#:tests? #f))
952 (home-page "https://mariadb.com/kb/en/mariadb-connector-c/")
953 (synopsis "Client library to connect to MySQL or MariaDB")
954 (description "The MariaDB Connector/C is used to connect applications
955developed in C/C++ to MariaDB and MySQL databases.")
956 (license license:lgpl2.1+)))
9077cf68 957
97dd1b15 958;; Don't forget to update the other postgresql packages when upgrading this one.
5f96f303
LC		 959(define-public postgresql
960 (package
961 (name "postgresql")
4cff2303 962 (version "10.13")
5f96f303
LC		 963 (source (origin
964 (method url-fetch)
dbeaf8f2 965 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
9020890b 966 version "/postgresql-" version ".tar.bz2"))
5f96f303
LC		 967 (sha256
968 (base32
4cff2303 969 "1qal0yp7a90yzya7hl56gsmw5fvacplrdhpn7h9gnbyr1i2iyw2d"))
c336567d 970 (patches (search-patches "postgresql-disable-resolve_symlinks.patch"))))
5f96f303 971 (build-system gnu-build-system)
dd213082 972 (arguments
8b7e6d00 973 `(#:configure-flags '("--with-uuid=e2fs" "--with-openssl")
b7aa3f5d 974 #:phases
dd213082
JD		 975 (modify-phases %standard-phases
976 (add-before 'configure 'patch-/bin/sh
977 (lambda _
978 ;; Refer to the actual shell.
979 (substitute* '("src/bin/pg_ctl/pg_ctl.c"
980 "src/bin/psql/command.c")
981 (("/bin/sh") (which "sh")))
b7aa3f5d
DM		 982 #t))
983 (add-after 'build 'build-contrib
984 (lambda _
1fbad3ad 985 (invoke "make" "-C" "contrib")))
b7aa3f5d
DM		 986 (add-after 'install 'install-contrib
987 (lambda _
1fbad3ad 988 (invoke "make" "-C" "contrib" "install"))))))
5f96f303
LC		 989 (inputs
990 `(("readline" ,readline)
bb93042c 991 ("libuuid" ,util-linux "lib")
8b7e6d00 992 ("openssl" ,openssl)
5f96f303 993 ("zlib" ,zlib)))
d887f420 994 (home-page "https://www.postgresql.org/")
5f96f303
LC		 995 (synopsis "Powerful object-relational database system")
996 (description
997 "PostgreSQL is a powerful object-relational database system. It is fully
998ACID compliant, has full support for foreign keys, joins, views, triggers, and
999stored procedures (in multiple languages). It includes most SQL:2008 data
1000types, including INTEGER, NUMERIC, BOOLEAN, CHAR, VARCHAR, DATE, INTERVAL, and
1001TIMESTAMP. It also supports storage of binary large objects, including
1002pictures, sounds, or video.")
ba8b9f8d 1003 (license (license:x11-style "file://COPYRIGHT"))))
5f96f303 1004
91477def
GB		 1005(define-public postgresql-11
1006 (package
1007 (inherit postgresql)
1008 (name "postgresql")
9d192665 1009 (version "11.6")
91477def
GB		 1010 (source (origin
1011 (method url-fetch)
1012 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1013 version "/postgresql-" version ".tar.bz2"))
1014 (sha256
1015 (base32
9d192665 1016 "0w1iq488kpzfgfnlw4k32lz5by695mpnkq461jrgsr99z5zlz4j9"))))))
91477def 1017
7658d89b
EF		 1018(define-public postgresql-9.6
1019 (package
1020 (inherit postgresql)
1021 (name "postgresql")
901c9930 1022 (version "9.6.16")
7658d89b
EF		 1023 (source (origin
1024 (method url-fetch)
1025 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1026 version "/postgresql-" version ".tar.bz2"))
1027 (sha256
1028 (base32
901c9930 1029 "1rr2dgv4ams8r2lp13w85c77rkmzpb88fjlc28mvlw6zq2fblv2w"))))))
7658d89b 1030
9763102b
TGR		 1031(define-public python-pymysql
1032 (package
1033 (name "python-pymysql")
4cb2f29e 1034 (version "0.9.3")
9763102b
TGR		 1035 (source
1036 (origin
1037 (method url-fetch)
1038 (uri (pypi-uri "PyMySQL" version))
1039 (sha256
4cb2f29e 1040 (base32 "1ry8lxgdc1p3k7gbw20r405jqi5lvhi5wk83kxdbiv8xv3f5kh6q"))))
9763102b
TGR		 1041 (build-system python-build-system)
1042 (native-inputs
1043 `(("python-unittest2" ,python-unittest2)))
1044 (inputs
1045 `(("python-cryptography" ,python-cryptography)))
1046 (arguments
1047 `(#:tests? #f)) ; tests expect a running MySQL
1048 (home-page "https://github.com/PyMySQL/PyMySQL/")
1049 (synopsis "Pure-Python MySQL driver")
1050 (description
1051 "PyMySQL is a pure-Python MySQL client library, based on PEP 249.
1052Most public APIs are compatible with @command{mysqlclient} and MySQLdb.")
1053 (license license:expat)))
1054
1055(define-public python2-pymysql
1056 (package-with-python2 python-pymysql))
1057
259a94e9
TD		 1058(define-public qdbm
1059 (package
1060 (name "qdbm")
1061 (version "1.8.78")
1062 (source
1063 (origin
1064 (method url-fetch)
1065 (uri (string-append "http://fallabs.com/" name "/"
1066 name "-" version ".tar.gz"))
1067 (sha256
1068 (base32
1069 "0gmpvhn02pkq280ffmn4da1g4mdr1xxz7l80b7y4n7km1mrzwrml"))))
1070 (build-system gnu-build-system)
1071 (arguments
7dc0f1d5
TD		 1072 `(#:configure-flags (list (string-append "LDFLAGS=-Wl,-rpath="
1073 (assoc-ref %outputs "out")
1074 "/lib"))
1075 #:make-flags (list "CFLAGS=-fPIC")))
d74647b0 1076 (home-page "https://fallabs.com/qdbm/")
259a94e9
TD		 1077 (synopsis "Key-value database")
1078 (description "QDBM is a library of routines for managing a
1079database. The database is a simple data file containing key-value
1080pairs. Every key and value is serial bytes with variable length.
1081Binary data as well as character strings can be used as a key or a
1082value. There is no concept of data tables or data types. Records are
1083organized in a hash table or B+ tree.")
1084 (license license:lgpl2.1+)))
1085
5f96f303
LC		 1086(define-public recutils
1087 (package
1088 (name "recutils")
c007e35d 1089 (version "1.8")
5f96f303
LC		 1090 (source (origin
1091 (method url-fetch)
1092 (uri (string-append "mirror://gnu/recutils/recutils-"
1093 version ".tar.gz"))
1094 (sha256
1095 (base32
c007e35d 1096 "14xiln4immfsw8isnvwvq0h23f6z0wilpgsc4qzabnrzb5lsx3nz"))))
5f96f303
LC		 1097 (build-system gnu-build-system)
1098
c007e35d 1099 (arguments '(#:configure-flags
b747a9db
LF		 1100 (list (string-append "--with-bash-headers="
1101 (assoc-ref %build-inputs "bash:include")
c007e35d 1102 "/include/bash"))))
5f96f303 1103
535a69e9 1104 (native-inputs `(("bc" ,bc)
b747a9db 1105 ("bash:include" ,bash "include")
c007e35d
EF		 1106 ("check" ,check)
1107 ("libuuid" ,util-linux)
1108 ("pkg-config" ,pkg-config)))
5f96f303
LC		 1109
1110 ;; TODO: Add more optional inputs.
5f96f303 1111 (inputs `(("curl" ,curl)
c007e35d 1112 ("libgcrypt" ,libgcrypt)))
5f96f303
LC		 1113 (synopsis "Manipulate plain text files as databases")
1114 (description
1115 "GNU Recutils is a set of tools and libraries for creating and
1116manipulating text-based, human-editable databases. Despite being text-based,
1117databases created with Recutils carry all of the expected features such as
c5779c93
LC		 1118unique fields, primary keys, time stamps and more. Many different field
1119types are supported, as is encryption.")
ba8b9f8d 1120 (license license:gpl3+)
6fd52309 1121 (home-page "https://www.gnu.org/software/recutils/")))
5f96f303 1122
9df78675
JH		 1123(define-public emacs-recutils
1124 (package
1125 (inherit recutils)
1126 (name "emacs-recutils")
1127 (build-system emacs-build-system)
1128 (arguments
1129 '(#:phases
1130 (modify-phases %standard-phases
1131 (add-after 'unpack 'change-directory
1132 (lambda _
1133 (chdir "etc")
1134 #t)))))
1135 (native-inputs '())
1136 (inputs '())
1137 (synopsis "Emacs mode for working with recutils database files")
1138 (description "This package provides an Emacs major mode @code{rec-mode}
1139for working with GNU Recutils text-based, human-editable databases. It
1140supports editing, navigation, and querying of recutils database files
1141including field and record folding.")))
1142
d3c6ad0a
MB		 1143(define-public rocksdb
1144 (package
1145 (name "rocksdb")
e0cba0d2 1146 (version "6.8.1")
d3c6ad0a 1147 (source (origin
8dd36658
MB		 1148 (method git-fetch)
1149 (uri (git-reference
1150 (url "https://github.com/facebook/rocksdb")
1151 (commit (string-append "v" version))))
1152 (file-name (git-file-name name version))
d3c6ad0a
MB		 1153 (sha256
1154 (base32
e0cba0d2 1155 "0i6qglyrcqwxnrvq67zm7ln79a4sj8mzgij9h0nz5zkxax8v1zg1"))
d3c6ad0a
MB		 1156 (modules '((guix build utils)))
1157 (snippet
1158 '(begin
1159 ;; TODO: unbundle gtest.
1160 (delete-file "build_tools/gnu_parallel")
7fa9cca8
MB		 1161 (substitute* "Makefile"
1162 (("build_tools/gnu_parallel") "parallel"))
d3c6ad0a
MB		 1163 #t))))
1164 (build-system gnu-build-system)
1165 (arguments
7fa9cca8
MB		 1166 `(#:make-flags (list "CC=gcc" "V=1"
1167 ;; Ceph requires that RTTI is enabled.
1168 "USE_RTTI=1"
d3c6ad0a 1169 (string-append "INSTALL_PATH="
7fa9cca8
MB		 1170 (assoc-ref %outputs "out"))
1171
1172 ;; Running the full test suite takes hours and require
1173 ;; a lot of disk space. Instead we only run a subset
1174 ;; (see .travis.yml and Makefile).
1175 "ROCKSDBTESTS_END=db_tailing_iter_test")
1176 #:test-target "check_some"
d7b344c5
MB		 1177 ;; Many tests fail on 32-bit platforms. There are multiple reports about
1178 ;; this upstream, but it's not going to be supported any time soon.
1179 #:tests? (let ((system ,(or (%current-target-system)
1180 (%current-system))))
1181 (or (string-prefix? "x86_64-linux" system)
1182 (string-prefix? "aarch64-linux" system)))
d3c6ad0a
MB		 1183 #:phases
1184 (modify-phases %standard-phases
1185 (add-after 'unpack 'patch-Makefile
1186 (lambda _
1187 (substitute* "Makefile"
f91c677c
MB		 1188 ;; Don't depend on the static library when installing.
1189 (("install: install-static")
1190 "install: install-shared")
d3c6ad0a
MB		 1191 (("#!/bin/sh") (string-append "#!" (which "sh"))))
1192 #t))
1193 (delete 'configure)
d7b344c5
MB		 1194 ;; The default target is only needed for tests and built on demand.
1195 (delete 'build)
1196 (add-before 'check 'disable-optimizations
1197 (lambda _
1198 ;; Prevent the build from passing '-march=native' to the compiler.
1199 (setenv "PORTABLE" "1")
1200 #t))
d3c6ad0a
MB		 1201 (add-before 'check 'disable-failing-tests
1202 (lambda _
1203 (substitute* "Makefile"
1204 ;; These tests reliably fail due to "Too many open files".
1205 (("^[[:blank:]]+env_test[[:blank:]]+\\\\") "\\")
1206 (("^[[:blank:]]+persistent_cache_test[[:blank:]]+\\\\") "\\"))
1207 #t))
7fa9cca8 1208 (add-after 'check 'build
f91c677c 1209 ;; The default build target is a debug build for tests. The
7fa9cca8
MB		 1210 ;; install target depends on the "shared_lib" release target
1211 ;; so we build it here for clarity.
1212 (lambda* (#:key (make-flags '()) parallel-build? #:allow-other-keys)
1213 (apply invoke "make" "shared_lib"
1214 `(,@(if parallel-build?
1215 `("-j" ,(number->string (parallel-job-count)))
1216 '())
1217 ,@make-flags)))))))
d3c6ad0a
MB		 1218 (native-inputs
1219 `(("parallel" ,parallel)
1220 ("perl" ,perl)
1221 ("procps" ,procps)
77e52190
MB		 1222 ("python" ,python-2)
1223 ("which" ,which)))
d3c6ad0a
MB		 1224 (inputs
1225 `(("bzip2" ,bzip2)
1226 ("gflags" ,gflags)
1227 ("jemalloc" ,jemalloc)
1228 ("lz4" ,lz4)
1229 ("snappy" ,snappy)
1230 ("zlib" ,zlib)))
0087a250 1231 (home-page "https://rocksdb.org/")
d3c6ad0a
MB		 1232 (synopsis "Persistent key-value store for fast storage")
1233 (description
1234 "RocksDB is a library that forms the core building block for a fast
1235key-value server, especially suited for storing data on flash drives. It
1236has a @dfn{Log-Structured-Merge-Database} (LSM) design with flexible tradeoffs
1237between @dfn{Write-Amplification-Factor} (WAF), @dfn{Read-Amplification-Factor}
1238(RAF) and @dfn{Space-Amplification-Factor} (SAF). It has multi-threaded
1239compactions, making it specially suitable for storing multiple terabytes of
1240data in a single database. RocksDB is partially based on @code{LevelDB}.")
7fa9cca8
MB		 1241 ;; RocksDB is dual licensed under GPL2 and ASL 2.0. Some header
1242 ;; files carry the 3-clause BSD license.
1243 (license (list license:gpl2 license:asl2.0 license:bsd-3))))
d3c6ad0a 1244
b92d02d9
RJ		 1245(define-public sparql-query
1246 (package
1247 (name "sparql-query")
1248 (version "1.1")
1249 (source (origin
ce64b9d1
EF		 1250 (method git-fetch)
1251 (uri (git-reference
1252 (url "https://github.com/tialaramex/sparql-query")
1253 (commit version)))
b92d02d9 1254 (sha256
ce64b9d1
EF		 1255 (base32 "0a84a89idpjhj9w2y3fmvzv7ldps1cva1kxvfmh897k02kaniwxk"))
1256 (file-name (git-file-name name version))))
b92d02d9
RJ		 1257 (build-system gnu-build-system)
1258 (inputs
6914eea0 1259 `(("curl" ,curl)
b92d02d9
RJ		 1260 ("glib" ,glib)
1261 ("libxml2" ,libxml2)
6914eea0
EF		 1262 ("ncurses" ,ncurses)
1263 ("readline" ,readline)))
b92d02d9
RJ		 1264 (native-inputs
1265 `(("pkg-config" ,pkg-config)))
1266 (arguments
1267 `(#:make-flags '("CC=gcc")
1268 #:phases
1269 (modify-phases %standard-phases
1270 (delete 'configure)
1271 ;; The Makefile uses git to obtain versioning information. This phase
1272 ;; substitutes the git invocation with the package version.
1273 (add-after 'unpack 'remove-git-dependency
1274 (lambda _
1275 (substitute* "Makefile"
1276 (("^gitrev :=.*$")
96272e28
MW		 1277 (string-append "gitrev = \"v" ,version "\"")))
1278 #t))
b92d02d9
RJ		 1279 ;; The install phase of the Makefile assumes $PREFIX/usr/local/bin.
1280 ;; This replacement does the same thing, except for using $PREFIX/bin
1281 ;; instead.
1282 (replace 'install
1283 (lambda* (#:key outputs #:allow-other-keys)
1284 (let* ((out (assoc-ref outputs "out"))
1285 (bin (string-append out "/bin")))
1286 (install-file "sparql-query" bin)
96272e28
MW		 1287 (symlink (string-append bin "/sparql-query")
1288 (string-append bin "/sparql-update")))
1289 #t))
b92d02d9
RJ		 1290 (replace 'check
1291 (lambda* (#:key make-flags #:allow-other-keys)
96272e28
MW		 1292 (apply invoke "make" `(,@make-flags "scan-test"))
1293 (invoke "./scan-test"))))))
b92d02d9
RJ		 1294 (home-page "https://github.com/tialaramex/sparql-query/")
1295 (synopsis "Command-line tool for accessing SPARQL endpoints over HTTP")
1296 (description "Sparql-query is a command-line tool for accessing SPARQL
36a4366d 1297endpoints over HTTP. It has been intentionally designed to @code{feel} similar to
b92d02d9
RJ		 1298tools for interrogating SQL databases. For example, you can enter a query over
1299several lines, using a semi-colon at the end of a line to indicate the end of
1300your query. It also supports readline so that you can more easily recall and
1301edit previous queries, even across sessions. It can be used non-interactively,
1302for example from a shell script.")
1303 ;; Some files (like scan-sparql.c) contain a GPLv3+ license header, while
1304 ;; others (like sparql-query.c) contain a GPLv2+ license header.
ba8b9f8d 1305 (license (list license:gpl3+))))
b92d02d9 1306
cabe8f18
CB		 1307(define-public sqitch
1308 (package
1309 (name "sqitch")
f64cd5d1 1310 (version "1.0.0")
cabe8f18
CB		 1311 (source
1312 (origin
1313 (method url-fetch)
1314 (uri (string-append
f64cd5d1
TGR		 1315 "mirror://cpan/authors/id/D/DW/DWHEELER/App-Sqitch-v"
1316 version ".tar.gz"))
cabe8f18 1317 (sha256
f64cd5d1 1318 (base32 "0p4wraqiscvwmmsvfqfy65blgsilwpvd9zj4d2zvm2xdx70ncr7l"))))
cabe8f18
CB		 1319 (build-system perl-build-system)
1320 (arguments
1321 '(#:phases
1322 (modify-phases %standard-phases
1323 (add-before 'check 'set-check-environment
1324 (lambda _
1325 (setenv "TZ" "UTC")
1326 (setenv "HOME" "/tmp")
1327 #t))
1328 (add-after 'install 'wrap-program
1329 (lambda* (#:key outputs #:allow-other-keys)
1330 (let* ((out (assoc-ref outputs "out"))
1331 (path (getenv "PERL5LIB")))
1332 (wrap-program (string-append out "/bin/sqitch")
1333 `("PERL5LIB" ":" prefix
1334 (,(string-append out "/lib/perl5/site_perl"
1335 ":"
1336 path)))))
1337 #t)))))
1338 (native-inputs
1339 `(("perl-capture-tiny" ,perl-capture-tiny)
1340 ("perl-io-pager" ,perl-io-pager)
1341 ("perl-module-build" ,perl-module-build)
1342 ("perl-module-runtime" ,perl-module-runtime)
1343 ("perl-path-class" ,perl-path-class)
1344 ("perl-test-deep" ,perl-test-deep)
1345 ("perl-test-dir" ,perl-test-dir)
1346 ("perl-test-exception" ,perl-test-exception)
1347 ("perl-test-file" ,perl-test-file)
1348 ("perl-test-file-contents" ,perl-test-file-contents)
1349 ("perl-test-mockmodule" ,perl-test-mockmodule)
1350 ("perl-test-nowarnings" ,perl-test-nowarnings)
1351 ("perl-test-warn" ,perl-test-warn)))
1352 (inputs
1353 `(("perl-class-xsaccessor" ,perl-class-xsaccessor)
1354 ("perl-clone" ,perl-clone)
1355 ("perl-config-gitlike" ,perl-config-gitlike)
1356 ("perl-datetime" ,perl-datetime)
1357 ("perl-datetime-timezone" ,perl-datetime-timezone)
1358 ("perl-dbd-pg" ,perl-dbd-pg)
1359 ("perl-dbi" ,perl-dbi)
1360 ("perl-devel-stacktrace" ,perl-devel-stacktrace)
1361 ("perl-encode-locale" ,perl-encode-locale)
cabe8f18
CB		 1362 ("perl-hash-merge" ,perl-hash-merge)
1363 ("perl-ipc-run3" ,perl-ipc-run3)
1364 ("perl-ipc-system-simple" ,perl-ipc-system-simple)
1365 ("perl-libintl-perl" ,perl-libintl-perl)
1366 ("perl-list-moreutils" ,perl-list-moreutils)
1367 ("perl-moo" ,perl-moo)
1368 ("perl-mysql-config" ,perl-mysql-config)
1369 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
1370 ("perl-path-class" ,perl-path-class)
1371 ("perl-perlio-utf8_strict" ,perl-perlio-utf8_strict)
1372 ("perl-string-formatter" ,perl-string-formatter)
1373 ("perl-string-shellquote" ,perl-string-shellquote)
1374 ("perl-sub-exporter" ,perl-sub-exporter)
1375 ("perl-template-tiny" ,perl-template-tiny)
1376 ("perl-template-toolkit" ,perl-template-toolkit)
1377 ("perl-throwable" ,perl-throwable)
1378 ("perl-try-tiny" ,perl-try-tiny)
1379 ("perl-type-tiny" ,perl-type-tiny)
1380 ("perl-type-tiny-xs" ,perl-type-tiny-xs)
1381 ("perl-uri" ,perl-uri)
1382 ("perl-uri-db" ,perl-uri-db)))
1383 (home-page "https://sqitch.org/")
1384 (synopsis "Database change management tool")
1385 (description
1386 "Sqitch is a standalone change management system for database schemas,
1387which uses SQL to describe changes.")
1388 (license license:x11)))
1389
311f06c9
TGR		 1390(define-public sqlcrush
1391 ;; Unfortunately, there is no proper upstream release and may never be.
1392 (let ((commit "b5f6868f189566a26eecc78d0f0659813c1aa98a")
1393 (revision "1"))
1394 (package
1395 (name "sqlcrush")
1396 (version (git-version "0.1.5" revision commit))
1397 (source (origin
1398 (method git-fetch)
1399 (uri (git-reference
1400 (url "https://github.com/coffeeandscripts/sqlcrush.git")
1401 (commit commit)))
1402 (file-name (git-file-name name version))
1403 (sha256
1404 (base32
1405 "0x3wy40r93p0jv3nbwj9a77wa4ff697d13r0wffmm7q9h3mzsww8"))))
1406 (build-system python-build-system)
1407 (inputs
1408 `(("python-cryptography" ,python-cryptography)
1409 ("python-psycopg2" ,python-psycopg2)
1410 ("python-pymysql" ,python-pymysql)
1411 ("python-sqlalchemy" ,python-sqlalchemy)))
1412 (home-page "https://github.com/coffeeandscripts/sqlcrush")
1413 (synopsis "Text console-based database viewer and editor")
1414 (description
1415 "SQLcrush lets you view and edit a database directly from the text
1416console through an ncurses interface. You can explore each table's structure,
1417browse and edit the contents, add and delete entries, all while tracking your
1418changes.")
1419 (license license:gpl3+)))) ; no headers, see README.md
1420
db60b1d9
LC		 1421(define-public tdb
1422 (package
1423 (name "tdb")
10f004f0 1424 (version "1.4.3")
db60b1d9
LC		 1425 (source (origin
1426 (method url-fetch)
ca473fc2 1427 (uri (string-append "https://www.samba.org/ftp/tdb/tdb-"
db60b1d9
LC		 1428 version ".tar.gz"))
1429 (sha256
1430 (base32
10f004f0 1431 "06waz0k50c7v3chd08mzp2rv7w4k4q9isbxx3vhlfpx1vy9q61f8"))))
db60b1d9
LC		 1432 (build-system gnu-build-system)
1433 (arguments
6ccb7814
EF		 1434 '(#:phases
1435 (modify-phases %standard-phases
1436 (replace 'configure
1437 (lambda* (#:key outputs #:allow-other-keys)
1438 (let ((out (assoc-ref outputs "out")))
1439 ;; The 'configure' script is a wrapper for Waf and
1440 ;; doesn't recognize things like '--enable-fast-install'.
96272e28
MW		 1441 (invoke "./configure"
1442 (string-append "--prefix=" out))))))))
db60b1d9
LC		 1443 (native-inputs
1444 `(;; TODO: Build the documentation.
1445 ;; ("docbook-xsl" ,docbook-xsl)
1446 ;; ("libxml2" ,libxml2)
1447 ;; ("libxslt" ,libxslt)
97dcedbd
MB		 1448 ("python" ,python) ;for the Waf build system
1449 ("which" ,which)))
1abd0904 1450 (home-page "https://tdb.samba.org/")
35b9e423 1451 (synopsis "Trivial database")
db60b1d9
LC		 1452 (description
1453 "TDB is a Trivial Database. In concept, it is very much like GDBM,
1454and BSD's DB except that it allows multiple simultaneous writers and uses
1455locking internally to keep writers from trampling on each other. TDB is also
1456extremely small.")
ba8b9f8d 1457 (license license:lgpl3+)))
274da61d
LC		 1458
1459(define-public perl-dbi
1460 (package
1461 (name "perl-dbi")
d0ed680b 1462 (version "1.643")
274da61d
LC		 1463 (source (origin
1464 (method url-fetch)
1465 (uri (string-append
1466 "mirror://cpan/authors/id/T/TI/TIMB/DBI-"
1467 version ".tar.gz"))
1468 (sha256
1469 (base32
d0ed680b 1470 "1yinx39960y241vf2sknxj0dfz82a5m9gvklq5rw78k0nlyrjawa"))))
274da61d
LC		 1471 (build-system perl-build-system)
1472 (synopsis "Database independent interface for Perl")
1473 (description "This package provides an database interface for Perl.")
9aba9b12 1474 (home-page "https://metacpan.org/release/DBI")
2f3108ad 1475 (license license:perl-license)))
274da61d 1476
feae3395
EB		 1477(define-public perl-dbix-class
1478 (package
1479 (name "perl-dbix-class")
435897c0 1480 (version "0.082841")
feae3395
EB		 1481 (source
1482 (origin
1483 (method url-fetch)
1484 (uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
1485 "DBIx-Class-" version ".tar.gz"))
1486 (sha256
1487 (base32
435897c0 1488 "1gf3hgv8f9rnr8bl4ljgsqk4aliphmvljhsk4282kvdc4mcgh1fp"))))
feae3395
EB		 1489 (build-system perl-build-system)
1490 (native-inputs
1491 `(("perl-dbd-sqlite" ,perl-dbd-sqlite)
1492 ("perl-file-temp" ,perl-file-temp)
2f837cf7 1493 ("perl-module-install" ,perl-module-install)
feae3395
EB		 1494 ("perl-package-stash" ,perl-package-stash)
1495 ("perl-test-deep" ,perl-test-deep)
1496 ("perl-test-exception" ,perl-test-exception)
1497 ("perl-test-warn" ,perl-test-warn)))
1498 (propagated-inputs
1499 `(("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
1500 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
1501 ("perl-class-inspector" ,perl-class-inspector)
1502 ("perl-config-any" ,perl-config-any)
1503 ("perl-context-preserve" ,perl-context-preserve)
1504 ("perl-data-dumper-concise" ,perl-data-dumper-concise)
1505 ("perl-data-page" ,perl-data-page)
1506 ("perl-dbi" ,perl-dbi)
1507 ("perl-devel-globaldestruction" ,perl-devel-globaldestruction)
1508 ("perl-hash-merge" ,perl-hash-merge)
1509 ("perl-module-find" ,perl-module-find)
1510 ("perl-moo" ,perl-moo)
1511 ("perl-mro-compat" ,perl-mro-compat)
1512 ("perl-namespace-clean" ,perl-namespace-clean)
1513 ("perl-path-class" ,perl-path-class)
1514 ("perl-scalar-list-utils" ,perl-scalar-list-utils)
1515 ("perl-scope-guard" ,perl-scope-guard)
1516 ("perl-sql-abstract" ,perl-sql-abstract)
1517 ("perl-sub-name" ,perl-sub-name)
1518 ("perl-text-balanced" ,perl-text-balanced)
1519 ("perl-try-tiny" ,perl-try-tiny)))
9aba9b12 1520 (home-page "https://metacpan.org/release/DBIx-Class")
feae3395
EB		 1521 (synopsis "Extensible and flexible object <-> relational mapper")
1522 (description "An SQL to OO mapper with an object API inspired by
1523Class::DBI (with a compatibility layer as a springboard for porting) and a
1524resultset API that allows abstract encapsulation of database operations. It
1525aims to make representing queries in your code as perl-ish as possible while
1526still providing access to as many of the capabilities of the database as
1527possible, including retrieving related records from multiple tables in a
1528single query, \"JOIN\", \"LEFT JOIN\", \"COUNT\", \"DISTINCT\", \"GROUP BY\",
1529\"ORDER BY\" and \"HAVING\" support.")
2f3108ad 1530 (license license:perl-license)))
e61fd0f0 1531
4e4039e5
EB		 1532(define-public perl-dbix-class-cursor-cached
1533 (package
1534 (name "perl-dbix-class-cursor-cached")
180cb81b 1535 (version "1.001004")
4e4039e5
EB		 1536 (source
1537 (origin
1538 (method url-fetch)
1539 (uri (string-append "mirror://cpan/authors/id/A/AR/ARCANEZ/"
1540 "DBIx-Class-Cursor-Cached-" version ".tar.gz"))
1541 (sha256
1542 (base32
180cb81b 1543 "09b2jahn2x12qm4f7qm1jzsxbz7qn1czp6a3fnl5l2i3l4r5421p"))))
4e4039e5
EB		 1544 (build-system perl-build-system)
1545 (native-inputs
1546 `(("perl-cache-cache" ,perl-cache-cache)
2f837cf7
MB		 1547 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1548 ("perl-module-install" ,perl-module-install)))
4e4039e5
EB		 1549 (propagated-inputs
1550 `(("perl-carp-clan" ,perl-carp-clan)
1551 ("perl-dbix-class" ,perl-dbix-class)))
9aba9b12 1552 (home-page "https://metacpan.org/release/DBIx-Class-Cursor-Cached")
4e4039e5
EB		 1553 (synopsis "Cursor with built-in caching support")
1554 (description "DBIx::Class::Cursor::Cached provides a cursor class with
1555built-in caching support.")
2f3108ad 1556 (license license:perl-license)))
4e4039e5 1557
e61fd0f0
EB		 1558(define-public perl-dbix-class-introspectablem2m
1559 (package
1560 (name "perl-dbix-class-introspectablem2m")
7a462b80 1561 (version "0.001002")
e61fd0f0
EB		 1562 (source
1563 (origin
1564 (method url-fetch)
68a9d6df 1565 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
e61fd0f0
EB		 1566 "DBIx-Class-IntrospectableM2M-" version ".tar.gz"))
1567 (sha256
1568 (base32
7a462b80 1569 "1w47rh2241iy5x3a9bqsyd5kdp9sk43dksr99frzv4qn4jsazfn6"))))
e61fd0f0 1570 (build-system perl-build-system)
2f837cf7
MB		 1571 (native-inputs
1572 `(("perl-module-install" ,perl-module-install)))
e61fd0f0
EB		 1573 (propagated-inputs
1574 `(("perl-dbix-class" ,perl-dbix-class)))
9aba9b12 1575 (home-page "https://metacpan.org/release/DBIx-Class-IntrospectableM2M")
e61fd0f0
EB		 1576 (synopsis "Introspect many-to-many relationships")
1577 (description "Because the many-to-many relationships are not real
1578relationships, they can not be introspected with DBIx::Class. Many-to-many
1579relationships are actually just a collection of convenience methods installed
1580to bridge two relationships. This DBIx::Class component can be used to store
1581all relevant information about these non-relationships so they can later be
1582introspected and examined.")
2f3108ad 1583 (license license:perl-license)))
708155df
EB		 1584
1585(define-public perl-dbix-class-schema-loader
1586 (package
1587 (name "perl-dbix-class-schema-loader")
1672e7e7 1588 (version "0.07049")
708155df
EB		 1589 (source
1590 (origin
1591 (method url-fetch)
1592 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
1593 "DBIx-Class-Schema-Loader-" version ".tar.gz"))
1594 (sha256
1595 (base32
1672e7e7 1596 "0r57fv71ypxafb85cpxph1hdqii7ipjwvc19yb6fpkvq2ggcssg8"))))
708155df
EB		 1597 (build-system perl-build-system)
1598 (native-inputs
1599 `(("perl-config-any" ,perl-config-any)
1600 ("perl-config-general" ,perl-config-general)
1601 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1602 ("perl-dbix-class-introspectablem2m" ,perl-dbix-class-introspectablem2m)
2f837cf7 1603 ("perl-module-install" ,perl-module-install)
708155df
EB		 1604 ("perl-moose" ,perl-moose)
1605 ("perl-moosex-markasmethods" ,perl-moosex-markasmethods)
1606 ("perl-moosex-nonmoose" ,perl-moosex-nonmoose)
1607 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
1608 ("perl-test-deep" ,perl-test-deep)
1609 ("perl-test-differences" ,perl-test-differences)
1610 ("perl-test-exception" ,perl-test-exception)
1611 ("perl-test-pod" ,perl-test-pod)
1612 ("perl-test-warn" ,perl-test-warn)))
1613 (propagated-inputs
1614 `(("perl-class-unload" ,perl-class-unload)
1615 ("perl-class-inspector" ,perl-class-inspector)
1616 ("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
1617 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
1618 ("perl-carp-clan" ,perl-carp-clan)
1619 ("perl-data-dump" ,perl-data-dump)
1620 ("perl-dbix-class" ,perl-dbix-class)
1621 ("perl-hash-merge" ,perl-hash-merge)
1622 ("perl-list-moreutils" ,perl-list-moreutils)
1623 ("perl-lingua-en-inflect-phrase" ,perl-lingua-en-inflect-phrase)
1624 ("perl-lingua-en-inflect-number" ,perl-lingua-en-inflect-number)
1625 ("perl-lingua-en-tagger" ,perl-lingua-en-tagger)
1626 ("perl-namespace-clean" ,perl-namespace-clean)
1627 ("perl-mro-compat" ,perl-mro-compat)
1628 ("perl-scope-guard" ,perl-scope-guard)
1629 ("perl-string-camelcase" ,perl-string-camelcase)
1630 ("perl-string-toidentifier-en" ,perl-string-toidentifier-en)
1631 ("perl-sub-name" ,perl-sub-name)
1632 ("perl-try-tiny" ,perl-try-tiny)))
1633 (arguments `(#:tests? #f)) ;TODO: t/20invocations.t fails
9aba9b12 1634 (home-page "https://metacpan.org/release/DBIx-Class-Schema-Loader")
708155df
EB		 1635 (synopsis "Create a DBIx::Class::Schema based on a database")
1636 (description "DBIx::Class::Schema::Loader automates the definition of a
1637DBIx::Class::Schema by scanning database table definitions and setting up the
1638columns, primary keys, unique constraints and relationships.")
2f3108ad 1639 (license license:perl-license)))
274da61d 1640
186eb132
EB		 1641(define-public perl-dbd-pg
1642 (package
1643 (name "perl-dbd-pg")
8c078dde 1644 (version "3.7.4")
186eb132
EB		 1645 (source
1646 (origin
1647 (method url-fetch)
1648 (uri (string-append "mirror://cpan/authors/id/T/TU/TURNSTEP/"
1649 "DBD-Pg-" version ".tar.gz"))
1650 (sha256
1651 (base32
8c078dde 1652 "0gkqlvbmzbdm0g4k328nlkjdg3wrjm5i2n9jxj1i8sqxkm79rylz"))))
186eb132
EB		 1653 (build-system perl-build-system)
1654 (native-inputs
1655 `(("perl-dbi" ,perl-dbi)))
1656 (propagated-inputs
1657 `(("perl-dbi" ,perl-dbi)
1658 ("postgresql" ,postgresql)))
9aba9b12 1659 (home-page "https://metacpan.org/release/DBD-Pg")
186eb132 1660 (synopsis "DBI PostgreSQL interface")
f33e71fc
LC		 1661 (description "This package provides a PostgreSQL driver for the Perl5
1662@dfn{Database Interface} (DBI).")
2f3108ad 1663 (license license:perl-license)))
186eb132 1664
4b7857a4
RW		 1665(define-public perl-dbd-mysql
1666 (package
1667 (name "perl-dbd-mysql")
49596a54 1668 (version "4.050")
4b7857a4
RW		 1669 (source
1670 (origin
1671 (method url-fetch)
49596a54 1672 (uri (string-append "mirror://cpan/authors/id/D/DV/DVEEDEN/"
4b7857a4
RW		 1673 "DBD-mysql-" version ".tar.gz"))
1674 (sha256
49596a54 1675 (base32 "0y4djb048i09dk19av7mzfb3khr72vw11p3ayw2p82jsy4gm8j2g"))))
4b7857a4 1676 (build-system perl-build-system)
702a87f2
TGR		 1677 (arguments
1678 `(#:phases
1679 (modify-phases %standard-phases
1680 (add-before 'configure 'skip-library-detection
1681 ;; Avoid depencies on perl-devel-checklib, openssl, and zlib. They
1682 ;; are really only needed for the test suite; their absence does not
1683 ;; affect the build or the end result.
1684 (lambda _
1685 (substitute* "Makefile.PL"
1686 (("use Devel::CheckLib;" match)
1687 (string-append "# " match))
1688 (("assert_lib")
1689 "print"))
1690 #t)))
1691 ;; Tests require running MySQL server.
1692 #:tests? #f))
4b7857a4
RW		 1693 (propagated-inputs
1694 `(("perl-dbi" ,perl-dbi)
2b8491fb
JL		 1695 ("mysql" ,mariadb "lib")
1696 ("mysql-dev" ,mariadb "dev")))
9aba9b12 1697 (home-page "https://metacpan.org/release/DBD-mysql")
4b7857a4
RW		 1698 (synopsis "DBI MySQL interface")
1699 (description "This package provides a MySQL driver for the Perl5
1700@dfn{Database Interface} (DBI).")
2f3108ad 1701 (license license:perl-license)))
4b7857a4 1702
274da61d
LC		 1703(define-public perl-dbd-sqlite
1704 (package
1705 (name "perl-dbd-sqlite")
26aa1fd2 1706 (version "1.64")
274da61d
LC		 1707 (source (origin
1708 (method url-fetch)
1709 (uri (string-append
1710 "mirror://cpan/authors/id/I/IS/ISHIGAKI/DBD-SQLite-"
1711 version ".tar.gz"))
1712 (sha256
1713 (base32
26aa1fd2 1714 "00gz5aw3xrr92lf9nfk0dhmy7a8jzmxhznddd9b0a8w4a1xqzbpl"))))
274da61d
LC		 1715 (build-system perl-build-system)
1716 (inputs `(("sqlite" ,sqlite)))
1717 (propagated-inputs `(("perl-dbi" ,perl-dbi)))
1718 (synopsis "SQlite interface for Perl")
1719 (description "DBD::SQLite is a Perl DBI driver for SQLite, that includes
1720the entire thing in the distribution. So in order to get a fast transaction
1721capable RDBMS working for your Perl project you simply have to install this
1722module, and nothing else.")
2f3108ad 1723 (license license:perl-license)
9aba9b12 1724 (home-page "https://metacpan.org/release/DBD-SQLite")))
14e84b2d 1725
55916fa2
CB		 1726(define-public perl-mysql-config
1727 (package
1728 (name "perl-mysql-config")
1729 (version "1.04")
1730 (source
1731 (origin
1732 (method url-fetch)
1733 (uri (string-append
1734 "mirror://cpan/authors/id/D/DA/DARREN/MySQL-Config-"
1735 version
1736 ".tar.gz"))
1737 (sha256
1738 (base32
1739 "1svn7ccw2gc4cazvc58j84rxhnc9vs01zpird0l8460598j475qr"))))
1740 (build-system perl-build-system)
1741 (home-page "https://metacpan.org/release/MySQL-Config")
1742 (synopsis "Parse and utilize MySQL's /etc/my.cnf and ~/.my.cnf files")
1743 (description
1744 "@code{MySQL::Config} emulates the @code{load_defaults} function from
1745libmysqlclient. It will fill an aray with long options, ready to be parsed by
1746@code{Getopt::Long}.")
1747 (license license:perl-license)))
1748
dd90952e
EB		 1749(define-public perl-sql-abstract
1750 (package
1751 (name "perl-sql-abstract")
2f813be3 1752 (version "1.86")
dd90952e
EB		 1753 (source
1754 (origin
1755 (method url-fetch)
439980b7 1756 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
dd90952e
EB		 1757 "SQL-Abstract-" version ".tar.gz"))
1758 (sha256
2f813be3 1759 (base32 "1pwcm8hwxcgidyyrak37lx69d85q728jxsb0b14jz93gbvdgg9z7"))))
dd90952e
EB		 1760 (build-system perl-build-system)
1761 (native-inputs
9dab5017
MB		 1762 `(("perl-module-install" ,perl-module-install)
1763 ("perl-test-deep" ,perl-test-deep)
dd90952e
EB		 1764 ("perl-test-exception" ,perl-test-exception)
1765 ("perl-test-warn" ,perl-test-warn)))
1766 (propagated-inputs
1767 `(("perl-hash-merge" ,perl-hash-merge)
1768 ("perl-moo" ,perl-moo)
1769 ("perl-mro-compat" ,perl-mro-compat)
1770 ("perl-text-balanced" ,perl-text-balanced)))
9aba9b12 1771 (home-page "https://metacpan.org/release/SQL-Abstract")
dd90952e
EB		 1772 (synopsis "Generate SQL from Perl data structures")
1773 (description "This module was inspired by the excellent DBIx::Abstract.
1774While based on the concepts used by DBIx::Abstract, the concepts used have
1775been modified to make the SQL easier to generate from Perl data structures.
1776The underlying idea is for this module to do what you mean, based on the data
1777structures you provide it, so that you don't have to modify your code every
e881752c 1778time your data changes.")
2f3108ad 1779 (license license:perl-license)))
14e84b2d 1780
b4dcb026
EB		 1781(define-public perl-sql-splitstatement
1782 (package
1783 (name "perl-sql-splitstatement")
1784 (version "1.00020")
1785 (source
1786 (origin
1787 (method url-fetch)
1788 (uri (string-append "mirror://cpan/authors/id/E/EM/EMAZEP/"
1789 "SQL-SplitStatement-" version ".tar.gz"))
1790 (sha256
1791 (base32
1792 "0bqg45k4c9qkb2ypynlwhpvzsl4ssfagmsalys18s5c79ps30z7p"))))
1793 (build-system perl-build-system)
1794 (native-inputs
1795 `(("perl-test-exception" ,perl-test-exception)))
1796 (propagated-inputs
1797 `(("perl-class-accessor" ,perl-class-accessor)
1798 ("perl-list-moreutils" ,perl-list-moreutils)
1799 ("perl-regexp-common" ,perl-regexp-common)
1800 ("perl-sql-tokenizer" ,perl-sql-tokenizer)))
9aba9b12 1801 (home-page "https://metacpan.org/release/SQL-SplitStatement")
b4dcb026
EB		 1802 (synopsis "Split SQL code into atomic statements")
1803 (description "This module tries to split any SQL code, even including
1804non-standard extensions, into the atomic statements it is composed of.")
2f3108ad 1805 (license license:perl-license)))
b4dcb026 1806
718c89c1
EB		 1807(define-public perl-sql-tokenizer
1808 (package
1809 (name "perl-sql-tokenizer")
1810 (version "0.24")
1811 (source
1812 (origin
1813 (method url-fetch)
1814 (uri (string-append "mirror://cpan/authors/id/I/IZ/IZUT/"
1815 "SQL-Tokenizer-" version ".tar.gz"))
1816 (sha256
1817 (base32
1818 "1qa2dfbzdlr5qqdam9yn78z5w3al5r8577x06qan8wv58ay6ka7s"))))
1819 (build-system perl-build-system)
9aba9b12 1820 (home-page "https://metacpan.org/release/SQL-Tokenizer")
718c89c1
EB		 1821 (synopsis "SQL tokenizer")
1822 (description "SQL::Tokenizer is a tokenizer for SQL queries. It does not
1823claim to be a parser or query verifier. It just creates sane tokens from a
1824valid SQL query.")
2f3108ad 1825 (license license:perl-license)))
718c89c1 1826
14e84b2d
JD		 1827(define-public unixodbc
1828 (package
1829 (name "unixodbc")
8327ffcc 1830 (version "2.3.7")
14e84b2d
JD		 1831 (source (origin
1832 (method url-fetch)
e881752c 1833 (uri
14e84b2d 1834 (string-append
3fef0a2f
EF		 1835 "ftp://ftp.unixodbc.org/pub/unixODBC/unixODBC-"
1836 version ".tar.gz"))
14e84b2d 1837 (sha256
8327ffcc 1838 (base32 "0xry3sg497wly8f7715a7gwkn2k36bcap0mvzjw74jj53yx6kwa5"))))
14e84b2d
JD		 1839 (build-system gnu-build-system)
1840 (synopsis "Data source abstraction library")
1841 (description "Unixodbc is a library providing an API with which to access
1842data sources. Data sources include SQL Servers and any software with an ODBC
1843Driver.")
ba8b9f8d 1844 (license license:lgpl2.1+)
14e84b2d
JD		 1845 ;; COPYING contains copy of lgpl2.1 - but copyright notices just say "LGPL"
1846 (home-page "http://www.unixodbc.org")))
b4a9c924
EB		 1847
1848(define-public unqlite
1849 (package
1850 (name "unqlite")
1851 (version "1.1.6")
1852 (source (origin
1853 (method url-fetch)
1854 ;; Contains bug fixes against the official release, and has an
1855 ;; autotooled build system.
1856 (uri (string-append "https://github.com/aidin36/tocc/releases/"
1857 "download/v1.0.0/"
1858 "unqlite-unofficial-" version ".tar.gz"))
1859 (sha256
1860 (base32
1861 "1sbpvhg15gadq0mpcy16q7k3rkg4b4dicpnn5xifpkpn02sqik3s"))))
1862 (build-system gnu-build-system)
1863 (arguments `(#:tests? #f)) ;No check target
f50ef349 1864 (home-page "https://www.unqlite.org")
b4a9c924
EB		 1865 (synopsis "In-memory key/value and document store")
1866 (description
1867 "UnQLite is an in-process software library which implements a
1868self-contained, serverless, zero-configuration, transactional NoSQL
1869database engine. UnQLite is a document store database similar to
1870MongoDB, Redis, CouchDB, etc. as well as a standard Key/Value store
69b4ffcf 1871similar to BerkeleyDB, LevelDB, etc.")
ba8b9f8d 1872 (license license:bsd-2)))
463f6766
DT		 1873
1874(define-public redis
1875 (package
1876 (name "redis")
84032506 1877 (version "5.0.7")
463f6766
DT		 1878 (source (origin
1879 (method url-fetch)
1880 (uri (string-append "http://download.redis.io/releases/redis-"
1881 version".tar.gz"))
1882 (sha256
1883 (base32
84032506 1884 "0ax8sf3vw0yadr41kzc04917scrg5wir1d94zmbz00b8pzm79nv1"))))
463f6766
DT		 1885 (build-system gnu-build-system)
1886 (arguments
1887 '(#:tests? #f ; tests related to master/slave and replication fail
1888 #:phases (modify-phases %standard-phases
1889 (delete 'configure))
1890 #:make-flags `("CC=gcc"
1891 "MALLOC=libc"
b25f060f 1892 "LDFLAGS=-ldl"
463f6766
DT		 1893 ,(string-append "PREFIX="
1894 (assoc-ref %outputs "out")))))
1895 (synopsis "Key-value cache and store")
1896 (description "Redis is an advanced key-value cache and store. Redis
1897supports many data structures including strings, hashes, lists, sets, sorted
1898sets, bitmaps and hyperloglogs.")
5a3cbfce 1899 (home-page "https://redis.io/")
ba8b9f8d 1900 (license license:bsd-3)))
a65e2a02 1901
1902(define-public kyotocabinet
1903 (package
1904 (name "kyotocabinet")
245e7a68 1905 (version "1.2.77")
a65e2a02 1906 (source (origin
1907 (method url-fetch)
1908 (uri (string-append "http://fallabs.com/kyotocabinet/pkg/"
1909 name "-" version ".tar.gz"))
1910 (sha256
1911 (base32
245e7a68 1912 "1rlx4307adbzd842b4npq6cwlw8h010ingxaz3qz1ijc70lr72an"))))
a65e2a02 1913 (build-system gnu-build-system)
1914 (arguments
1915 `(#:configure-flags
1916 (list
9d59023e 1917 "--disable-opt" ;"-march=native". XXX this also turns off -O0.
a65e2a02 1918 (string-append "LDFLAGS=-Wl,-rpath="
1919 (assoc-ref %outputs "out") "/lib"))))
1920 (inputs `(("zlib" ,zlib)))
1921 (home-page "http://fallabs.com/kyotocabinet/")
1922 (synopsis
1923 "Kyoto Cabinet is a modern implementation of the DBM database")
1924 (description
1925 "Kyoto Cabinet is a standalone file-based database that supports Hash
1926and B+ Tree data storage models. It is a fast key-value lightweight
1927database and supports many programming languages. It is a NoSQL database.")
ba8b9f8d 1928 (license license:gpl3+)))
6242b314 1929
bdc11dc4 1930(define-public tokyocabinet
1931 (package
1932 (name "tokyocabinet")
1933 (version "1.4.48")
1934 (source
1935 (origin
1936 (method url-fetch)
1937 (uri (string-append "http://fallabs.com/tokyocabinet/"
1938 name "-" version ".tar.gz"))
1939 (sha256
1940 (base32
1941 "140zvr0n8kvsl0fbn2qn3f2kh3yynfwnizn4dgbj47m975yg80x0"))))
1942 (build-system gnu-build-system)
1943 (arguments
1944 `(#:configure-flags
1945 (list "--enable-pthread" "--enable-off64" "--enable-fastest"
1946 (string-append "LDFLAGS=-Wl,-rpath="
1947 (assoc-ref %outputs "out") "/lib"))))
1948 (inputs
1949 `(("zlib" ,zlib)))
1950 (home-page "http://fallabs.com/tokyocabinet/")
1951 (synopsis "Tokyo Cabinet is a modern implementation of the DBM database")
1952 (description
1953 "Tokyo Cabinet is a library of routines for managing a database.
1954The database is a simple data file containing records, each is a pair of a
1955key and a value. Every key and value is serial bytes with variable length.
1956Both binary data and character string can be used as a key and a value.
1957There is neither concept of data tables nor data types. Records are
1958organized in hash table, B+ tree, or fixed-length array.")
1959 (license license:lgpl2.1+)))
1960
6242b314
SB		 1961(define-public wiredtiger
1962 (package
1963 (name "wiredtiger")
81e95821 1964 (version "2.9.1")
6242b314
SB		 1965 (source (origin
1966 (method url-fetch)
1967 (uri (string-append
1968 "http://source.wiredtiger.com/releases/wiredtiger-"
1969 version ".tar.bz2"))
1970 (sha256
1971 (base32
81e95821 1972 "0krwnb2zfbhvjaskwl875qzd3y626s84zcciq2mxr5c5riw3yh6s"))))
6242b314
SB		 1973 (build-system gnu-build-system)
1974 (arguments
a469c695 1975 '(#:configure-flags '("--enable-lz4" "--with-builtins=snappy,zlib")
6242b314
SB		 1976 #:phases
1977 (modify-phases %standard-phases
1978 (add-before 'check 'disable-test/fops
1979 (lambda _
1980 ;; XXX: timed out after 3600 seconds of silence
1981 (substitute* "Makefile"
1982 (("test/fops") ""))
1983 #t)))))
1984 (inputs
1985 `(("lz4" ,lz4)
3faa422d
CB		 1986 ("zlib" ,zlib)
1987 ("snappy" ,snappy)))
6242b314
SB		 1988 (home-page "http://source.wiredtiger.com/")
1989 (synopsis "NoSQL data engine")
1990 (description
1991 "WiredTiger is an extensible platform for data management. It supports
1992row-oriented storage (where all columns of a row are stored together),
1993column-oriented storage (where columns are stored in groups, allowing for
1994more efficient access and storage of column subsets) and log-structured merge
1995trees (LSM), for sustained throughput under random insert workloads.")
ba8b9f8d 1996 (license license:gpl3) ; or GPL-2
6242b314 1997 ;; configure.ac: WiredTiger requires a 64-bit build.
092b7b3e 1998 (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))))
90c2ee88 1999
4680fef7
AB		 2000(define-public wiredtiger-3
2001 (package
2002 (inherit wiredtiger)
2003 (name "wiredtiger")
2004 (version "3.1.0")
2005 (source (origin
2006 (method url-fetch)
2007 (uri (string-append "http://source.wiredtiger.com/releases/wiredtiger-"
2008 version ".tar.bz2"))
2009 (sha256
2010 (base32
2011 "014awypv579ascg4jbx4pndj2wld337m79yyzrzyr7hxrff139jx"))))))
2012
16973071
KB		 2013(define-public guile-wiredtiger
2014 (package
2015 (name "guile-wiredtiger")
b1e6b938 2016 (version "0.7.0")
16973071
KB		 2017 (source (origin
2018 (method git-fetch)
2019 (uri (git-reference
2020 (url "https://framagit.org/a-guile-mind/guile-wiredtiger.git")
b1e6b938 2021 (commit "340ad4bc2ff4dcc6216a2f5c6f9172ca320ac66b")))
16973071
KB		 2022 (file-name (string-append name "-" version "-checkout"))
2023 (sha256
2024 (base32
b1e6b938 2025 "15j36bvxxzil7qpwlmh1rffqpva3ynvrcpqhhqbj2c9208ayz595"))))
16973071
KB		 2026 (build-system gnu-build-system)
2027 (arguments
3926a099 2028 '(#:parallel-tests? #f ;; tests can't be run in parallel, yet.
16973071
KB		 2029 #:configure-flags
2030 (list (string-append "--with-libwiredtiger-prefix="
2031 (assoc-ref %build-inputs "wiredtiger")))
189be331 2032 #:make-flags '("GUILE_AUTO_COMPILE=0")))
16973071
KB		 2033 (native-inputs
2034 `(("autoconf" ,autoconf)
2035 ("automake" ,automake)
2036 ("pkg-config" ,pkg-config)))
2037 (inputs
b1e6b938 2038 `(("wiredtiger" ,wiredtiger-3)
16973071
KB		 2039 ("guile" ,guile-2.2)))
2040 (propagated-inputs
b1e6b938 2041 `(("guile-bytestructures" ,guile-bytestructures)))
3926a099 2042 (synopsis "WiredTiger bindings for GNU Guile")
16973071
KB		 2043 (description
2044 "This package provides Guile bindings to the WiredTiger ``NoSQL''
b1e6b938 2045database.")
16973071
KB		 2046 (home-page "https://framagit.org/a-guile-mind/guile-wiredtiger")
2047 (license license:gpl3+)))
2048
90c2ee88
DM		 2049(define-public perl-db-file
2050 (package
2051 (name "perl-db-file")
76899e92 2052 (version "1.853")
90c2ee88
DM		 2053 (source
2054 (origin
2055 (method url-fetch)
76899e92
TGR		 2056 (uri (string-append "mirror://cpan/authors/id/P/PM/PMQS/DB_File-"
2057 version ".tar.gz"))
90c2ee88 2058 (sha256
76899e92 2059 (base32 "1y967si45vj0skip1hnhicbv9da29fv6qcfwnsbnvj06n36mkj6h"))))
90c2ee88
DM		 2060 (build-system perl-build-system)
2061 (inputs `(("bdb" ,bdb)))
2062 (native-inputs `(("perl-test-pod" ,perl-test-pod)))
2063 (arguments
2064 `(#:phases (modify-phases %standard-phases
2065 (add-before
2066 'configure 'modify-config.in
2067 (lambda* (#:key inputs #:allow-other-keys)
2068 (substitute* "config.in"
2069 (("/usr/local/BerkeleyDB") (assoc-ref inputs "bdb")))
2070 #t)))))
9aba9b12 2071 (home-page "https://metacpan.org/release/DB_File")
90c2ee88
DM		 2072 (synopsis
2073 "Perl5 access to Berkeley DB version 1.x")
2074 (description
2075 "The DB::File module provides Perl bindings to the Berkeley DB version 1.x.")
2f3108ad 2076 (license license:perl-license)))
0e1b262e
DC		 2077
2078(define-public lmdb
2079 (package
2080 (name "lmdb")
a8fa39cd 2081 (version "0.9.24")
f167b432
TGR		 2082 (source
2083 (origin
2084 (method git-fetch)
2085 (uri (git-reference
2086 (url "https://github.com/LMDB/lmdb.git")
2087 (commit (string-append "LMDB_" version))))
2088 (file-name (git-file-name name version))
2089 (sha256
a8fa39cd 2090 (base32 "088q6m8fvr12w43s461h7cvpg5hj8csaqj6n9pci150dz7bk5lxm"))))
0e1b262e
DC		 2091 (build-system gnu-build-system)
2092 (arguments
2093 `(#:test-target "test"
2094 #:phases
2095 (modify-phases %standard-phases
2096 (replace 'configure
2097 (lambda* (#:key outputs #:allow-other-keys)
f167b432 2098 (chdir "libraries/liblmdb")
0e1b262e
DC		 2099 (substitute* "Makefile"
2100 (("/usr/local") (assoc-ref outputs "out")))
2101 #t)))))
2102 (home-page "https://symas.com/products/lightning-memory-mapped-database")
fda852ff
TGR		 2103 (synopsis "Lightning Memory-Mapped Database library")
2104 (description
2105 "The @dfn{Lightning Memory-Mapped Database} (LMDB) is a high-performance
2106transactional database. Unlike more complex relational databases, LMDB handles
2107only key-value pairs (stored as arbitrary byte arrays) and relies on the
2108underlying operating system for caching and locking, keeping the code small and
2109simple.
2110The use of ‘zero-copy’ memory-mapped files combines the persistence of classic
2111disk-based databases with high read performance that scales linearly over
2112multiple cores. The size of each database is limited only by the size of the
2113virtual address space — not physical RAM.")
0e1b262e 2114 (license license:openldap2.8)))
fe71eee0 2115
659bc436 2116(define-public lmdbxx
2117 (package
2118 (name "lmdbxx")
2119 (version "0.9.14.0")
2120 (source
2121 (origin
2122 (method git-fetch)
2123 (uri (git-reference
2124 (url "https://github.com/drycpp/lmdbxx.git")
2125 (commit version)))
2126 (file-name (git-file-name name version))
2127 (sha256
2128 (base32 "1jmb9wg2iqag6ps3z71bh72ymbcjrb6clwlkgrqf1sy80qwvlsn6"))))
2129 (arguments
2130 `(#:make-flags
2131 (list (string-append "PREFIX=" (assoc-ref %outputs "out")))
2132 #:phases
2133 (modify-phases %standard-phases
2134 (delete 'configure))))
2135 (build-system gnu-build-system)
2136 (inputs `(("lmdb" ,lmdb)))
2137 (home-page "http://lmdbxx.sourceforge.net")
2138 (synopsis "C++11 wrapper for the LMDB embedded B+ tree database library")
2139 (description "@code{lmdbxx} is a comprehensive @code{C++} wrapper for the
2140@code{LMDB} embedded database library, offering both an error-checked
2141procedural interface and an object-oriented resource interface with RAII
2142semantics.")
2143 (license license:unlicense)))
2144
fe71eee0
JN		 2145(define-public libpqxx
2146 (package
2147 (name "libpqxx")
2148 (version "4.0.1")
2149 (source (origin
2150 (method url-fetch)
2151 (uri (string-append
2152 "http://pqxx.org/download/software/libpqxx/"
2153 name "-" version ".tar.gz"))
2154 (sha256
2155 (base32
2156 "0f6wxspp6rx12fkasanb0z2g2gc8dhcfwnxagx8wwqbpg6ifsz09"))))
2157 (build-system gnu-build-system)
2158 (native-inputs
2159 `(("python" ,python-2)))
2160 (inputs `(("postgresql" ,postgresql)))
2161 (arguments
5ac097e2
MB		 2162 `(#:tests? #f ; # FAIL: 1
2163 #:phases
2164 (modify-phases %standard-phases
2165 (add-before 'configure 'fix-sed-command
2166 (lambda _
2167 ;; Newer sed versions error out if double brackets are not used.
2168 (substitute* "configure"
2169 (("\\[:space:\\]") "[[:space:]]"))
2170 #t)))))
fe71eee0
JN		 2171 (synopsis "C++ connector for PostgreSQL")
2172 (description
2173 "Libpqxx is a C++ library to enable user programs to communicate with the
2174PostgreSQL database back-end. The database back-end can be local or it may be
2175on another machine, accessed via TCP/IP.")
2176 (home-page "http://pqxx.org/")
2177 (license license:bsd-3)))
4d98bfaf
EF		 2178
2179(define-public python-peewee
2180 (package
2181 (name "python-peewee")
afd84536 2182 (version "2.10.2")
4d98bfaf
EF		 2183 (source
2184 (origin
2185 (method url-fetch)
2186 (uri (pypi-uri "peewee" version))
2187 (sha256
2188 (base32
afd84536 2189 "10f2mrd5hw6rjklrzaix2lsxlgc8vx3xak54arcy6yd791zhchi3"))))
4d98bfaf
EF		 2190 (build-system python-build-system)
2191 (arguments
2192 `(#:tests? #f)) ; Fails to import test data
2193 (native-inputs
2194 `(("python-cython" ,python-cython)))
2195 (home-page "https://github.com/coleifer/peewee/")
2196 (synopsis "Small object-relational mapping utility")
2197 (description
2198 "Peewee is a simple and small ORM (object-relation mapping) tool. Peewee
2199handles converting between pythonic values and those used by databases, so you
2200can use Python types in your code without having to worry. It has built-in
2201support for sqlite, mysql and postgresql. If you already have a database, you
2202can autogenerate peewee models using @code{pwiz}, a model generator.")
2203 (license license:expat)))
2204
2205(define-public python2-peewee
2206 (package-with-python2 python-peewee))
62ea44fc 2207
1110a421
LDB		 2208(define-public python-tortoise-orm
2209 (package
2210 (name "python-tortoise-orm")
b9d96ed7 2211 (version "0.16.7")
1110a421
LDB		 2212 (source
2213 (origin
2214 (method url-fetch)
2215 (uri (pypi-uri "tortoise-orm" version))
2216 (sha256
2217 (base32
b9d96ed7 2218 "0wr7p4v0b16ypm9fcpwpl99kf491m6w3jkd13xcsgq13fy73fbqc"))))
1110a421
LDB		 2219 (build-system python-build-system)
2220 ;; Disable tests for now. They pull in a lot of dependencies.
2221 (arguments `(#:tests? #f))
2222 (native-inputs
b9d96ed7 2223 `(("python-asynctest" ,python-asynctest)
1110a421
LDB		 2224 ("python-nose2" ,python-nose2)))
2225 (propagated-inputs
2226 `(("python-aiosqlite" ,python-aiosqlite)
2227 ("python-pypika" ,python-pypika)
b9d96ed7 2228 ("python-ciso8601" ,python-ciso8601)
1110a421
LDB		 2229 ("python-typing-extensions"
2230 ,python-typing-extensions)))
2231 (home-page
2232 "https://github.com/tortoise/tortoise-orm")
2233 (synopsis
2234 "Easy async ORM for python, built with relations in mind")
2235 (description
2236 "Tortoise ORM is an easy-to-use asyncio ORM (Object Relational Mapper)
2237inspired by Django. Tortoise ORM was build with relations in mind and
2238admiration for the excellent and popular Django ORM. It’s engraved in its
2239design that you are working not with just tables, you work with relational
2240data.")
2241 (license license:asl2.0)))
2242
62ea44fc
AP		 2243(define-public sqlcipher
2244 (package
2245 (name "sqlcipher")
682c2918 2246 (version "3.4.2")
62ea44fc
AP		 2247 (source
2248 (origin
2249 (method url-fetch)
2250 (uri (string-append "https://github.com/sqlcipher/" name
2251 "/archive/v" version ".tar.gz"))
2252 (sha256
682c2918 2253 (base32 "1nxarwbci8jx99f1d0y1ivxcv25s78l1p7q6qy28lkpkcx8pm2b9"))
62ea44fc
AP		 2254 (file-name (string-append name "-" version ".tar.gz"))))
2255 (build-system gnu-build-system)
2256 (inputs
2257 `(("libcrypto" ,openssl)
2258 ("libtcl8.6" ,tcl))) ; required for running the tests
2259 (native-inputs
2260 `(("tcl" ,tcl)))
2261 (arguments
2262 '(#:configure-flags
2263 '("--enable-tempstore=yes"
2264 "CFLAGS=-DSQLITE_HAS_CODEC -DSQLITE_ENABLE_FTS3"
2265 "LDFLAGS=-lcrypto -ltcl8.6"
2266 "--disable-tcl")
2267 ;; tests cannot be run from the Makefile
2268 ;; see: <https://github.com/sqlcipher/sqlcipher/issues/172>
2269 #:test-target "testfixture"
2270 #:phases
2271 (modify-phases %standard-phases
2272 (add-before 'check 'build-test-runner
2273 (assoc-ref %standard-phases 'check))
2274 (replace 'check
2275 (lambda _
96272e28 2276 (invoke "./testfixture" "test/crypto.test"))))))
62ea44fc
AP		 2277 (home-page "https://www.zetetic.net/sqlcipher/")
2278 (synopsis
2279 "Library providing transparent encryption of SQLite database files")
2280 (description "SQLCipher is an implementation of SQLite, extended to
2281provide transparent 256-bit AES encryption of database files. Pages are
2282encrypted before being written to disk and are decrypted when read back. It’s
2283well suited for protecting embedded application databases and for mobile
2284development.")
2285 ;; The source files
2286 ;; src/{crypto.c,crypto_impl.c,crypto.h,crypto_cc.c,crypto_libtomcrypt.c},
2287 ;; src/{crypto_openssl.c,sqlcipher.h}, tool/crypto-speedtest.tcl,
2288 ;; test/crypto.test are licensed under a 3-clause BSD license. All other
2289 ;; source files are in the public domain.
2290 (license (list license:public-domain license:bsd-3))))
98d403bb
DM		 2291
2292(define-public python-pyodbc-c
2293 (package
2294 (name "python-pyodbc-c")
c6b6a74e 2295 (version "3.1.4")
98d403bb
DM		 2296 (source
2297 (origin
2298 (method url-fetch)
2299 (uri (string-append "https://gitlab.com/daym/pyodbc-c/repository/"
2300 "archive.tar.gz?ref=v" version))
2301 (sha256
2302 (base32
c6b6a74e 2303 "05aq2297k779xidmxcwkrrxjvj1bh2q7d9a1rcjv6zr15y764ga9"))
98d403bb
DM		 2304 (file-name (string-append name "-" version ".tar.gz"))))
2305 (build-system python-build-system)
2306 (inputs
2307 `(("unixodbc" ,unixodbc)))
2308 (arguments
2309 `(;; No unit tests exist.
2310 #:tests? #f))
2311 (home-page "https://github.com/mkleehammer/pyodbc")
2312 (synopsis "Python ODBC Library")
2313 (description "@code{python-pyodbc-c} provides a Python DB-API driver
2314for ODBC.")
2315 (license (license:x11-style "file://LICENSE.TXT"))))
2316
2317(define-public python2-pyodbc-c
2318 (package-with-python2 python-pyodbc-c))
d39a84e8 2319
41916bea
DM		 2320(define-public python-pyodbc
2321 (package
2322 (name "python-pyodbc")
dbc8a6e7 2323 (version "4.0.30")
41916bea
DM		 2324 (source
2325 (origin
2326 (method url-fetch)
2327 (uri (pypi-uri "pyodbc" version))
2328 (sha256
dbc8a6e7 2329 (base32 "0skjpraar6hcwsy82612bpj8nw016ncyvvq88j5syrikxgp5saw5"))
41916bea
DM		 2330 (file-name (string-append name "-" version ".tar.gz"))))
2331 (build-system python-build-system)
2332 (inputs
2333 `(("unixodbc" ,unixodbc)))
2334 (arguments
d5be746a 2335 `(#:tests? #f)) ; no unit tests exist
41916bea
DM		 2336 (home-page "https://github.com/mkleehammer/pyodbc")
2337 (synopsis "Python ODBC Library")
2338 (description "@code{python-pyodbc} provides a Python DB-API driver
2339for ODBC.")
2340 (license (license:x11-style "file:///LICENSE.TXT"))))
2341
2342(define-public python2-pyodbc
2343 (package-with-python2 python-pyodbc))
2344
d39a84e8
AI		 2345(define-public mdbtools
2346 (package
2347 (name "mdbtools")
2348 (version "0.7.1")
2349 (source
2350 (origin
f1f1cebd
RW		 2351 (method git-fetch)
2352 (uri (git-reference
2353 (url "https://github.com/brianb/mdbtools.git")
2354 (commit version)))
2355 (file-name (git-file-name name version))
d39a84e8
AI		 2356 (sha256
2357 (base32
f1f1cebd 2358 "0gwcpp9y09xhs21g7my2fs8ncb8i6ahlyixcx8jd3q97jbzj441l"))))
d39a84e8
AI		 2359 (build-system gnu-build-system)
2360 (inputs
2361 `(("glib" ,glib)))
2362 (native-inputs
2363 `(("autoconf" ,autoconf)
2364 ("automake" ,automake)
2365 ("libtool" ,libtool)
2366 ("pkg-config" ,pkg-config)
2367 ("txt2man" ,txt2man)
2368 ("which" ,which)))
d39a84e8
AI		 2369 (home-page "http://mdbtools.sourceforge.net/")
2370 (synopsis "Read Microsoft Access databases")
2371 (description "MDB Tools is a set of tools and applications to read the
2372proprietary MDB file format used in Microsoft's Access database package. This
2373includes programs to export schema and data from Microsoft's Access database
2374file format to other databases such as MySQL, Oracle, Sybase, PostgreSQL,
2375etc., and an SQL engine for performing simple SQL queries.")
2376 (license (list license:lgpl2.0
2377 license:gpl2+))))
07041d95
TGR		 2378
2379(define-public python-lmdb
2380 (package
2381 (name "python-lmdb")
b7dfd579 2382 (version "0.98")
07041d95
TGR		 2383 (source (origin
2384 (method url-fetch)
2385 (uri (pypi-uri "lmdb" version))
2386 (sha256
2387 (base32
b7dfd579 2388 "027pgbdhhdcbwj53vrzr6a60gjhmz4s75gl3180fd4q8pwlbq986"))
07041d95
TGR		 2389 (modules '((guix build utils)))
2390 (snippet
2391 ;; Delete bundled lmdb source files.
6cbee49d
MW		 2392 '(begin
2393 (for-each delete-file (list "lib/lmdb.h"
2394 "lib/mdb.c"
2395 "lib/midl.c"
2396 "lib/midl.h"))
2397 #t))))
07041d95
TGR		 2398 (build-system python-build-system)
2399 (inputs
2400 `(("lmdb" ,lmdb)))
2401 (arguments
2402 `(#:phases
2403 (modify-phases %standard-phases
2404 (add-before 'build 'use-system-lmdb
2405 (lambda* (#:key inputs #:allow-other-keys)
2406 (let ((lmdb (assoc-ref inputs "lmdb")))
2407 (setenv "LMDB_FORCE_SYSTEM" "set")
2408 (setenv "LMDB_INCLUDEDIR" (string-append lmdb "/include"))
2409 (setenv "LMDB_LIBDIR" (string-append lmdb "/lib"))
2410 #t))))
2411 ;; Tests fail with: ‘lmdb.tool: Please specify environment (--env)’.
2412 #:tests? #f))
2413 (home-page "https://github.com/dw/py-lmdb")
2414 (synopsis "Python binding for the ‘Lightning’ database (LMDB)")
2415 (description
2416 "python-lmdb or py-lmdb is a Python binding for the @dfn{Lightning
2417Memory-Mapped Database} (LMDB), a high-performance key-value store.")
2418 (license
2419 (list license:openldap2.8
2420 ;; ‘lib/win32/inttypes.h’ and ‘lib/win32-stdint/stdint.h’ are BSD-3,
2421 ;; but not actually needed on platforms currently supported by Guix.
2422 license:bsd-3))))
2423
da1f7a9e
BW		 2424(define-public python-orator
2425 (package
2426 (name "python-orator")
51d42caa 2427 (version "0.9.9")
da1f7a9e
BW		 2428 (source (origin
2429 (method url-fetch)
2430 (uri (pypi-uri "orator" version))
2431 (sha256
2432 (base32
51d42caa 2433 "0mbgybz63ryhr9p1f4glnls5c57jp6il3dw0kf97f3pj80687rvg"))))
da1f7a9e 2434 (build-system python-build-system)
51d42caa
MB		 2435 ;; FIXME: Tests are not distributed with PyPI, and the repository
2436 ;; does not contain setup.py. How to test?
2437 (arguments '(#:tests? #f))
da1f7a9e
BW		 2438 (propagated-inputs
2439 `(("python-backpack" ,python-backpack)
2440 ("python-blinker" ,python-blinker)
2441 ("python-cleo" ,python-cleo)
2442 ("python-faker" ,python-faker)
2443 ("python-inflection" ,python-inflection)
2444 ("python-lazy-object-proxy" ,python-lazy-object-proxy)
2445 ("python-pendulum" ,python-pendulum)
2446 ("python-pyaml" ,python-pyaml)
2447 ("python-pygments" ,python-pygments)
51d42caa 2448 ("python-pyyaml" ,python-pyyaml)
da1f7a9e
BW		 2449 ("python-simplejson" ,python-simplejson)
2450 ("python-six" ,python-six)
2451 ("python-wrapt" ,python-wrapt)))
2452 (home-page "https://orator-orm.com/")
2453 (synopsis "ActiveRecord ORM for Python")
2454 (description
2455 "Orator provides a simple ActiveRecord-like Object Relational Mapping
2456implementation for Python.")
2457 (license license:expat)
2458 (properties `((python2-variant . ,(delay python2-orator))))))
2459
2460(define-public python2-orator
2461 (package-with-python2 (strip-python2-variant python-orator)))
61ce0998
RJ		 2462
2463(define-public virtuoso-ose
2464 (package
2465 (name "virtuoso-ose")
e63da346 2466 (version "7.2.5")
61ce0998
RJ		 2467 (source
2468 (origin
2469 (method url-fetch)
2470 (uri (string-append
2471 "https://github.com/openlink/virtuoso-opensource/releases/"
2472 "download/v" version "/virtuoso-opensource-" version ".tar.gz"))
2473 (sha256
e63da346 2474 (base32 "0r1xakclkfi69pzh8z2k16z3x0m49pxp764icj0ad4w4bb97fr42"))))
61ce0998
RJ		 2475 (build-system gnu-build-system)
2476 (arguments
6d09a7b5
RJ		 2477 `(#:tests? #f ; Tests require a network connection.
2478 ;; TODO: Removing the libsrc/zlib source directory breaks the build.
2479 ;; This indicates that the internal zlib code may still be used.
2480 #:configure-flags '("--without-internal-zlib"
2481 "--with-readline")))
61ce0998 2482 (inputs
95c633e0 2483 `(("openssl" ,openssl-1.0)
6d09a7b5
RJ		 2484 ("net-tools" ,net-tools)
2485 ("readline" ,readline)
2486 ("zlib" ,zlib)))
61ce0998
RJ		 2487 (home-page "http://vos.openlinksw.com/owiki/wiki/VOS/")
2488 (synopsis "Multi-model database system")
2489 (description "Virtuoso is a scalable cross-platform server that combines
2490relational, graph, and document data management with web application server
2491and web services platform functionality.")
48b68c61
EF		 2492 ;; configure: error: ... can only be build on 64bit platforms
2493 (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))
61ce0998 2494 (license license:gpl2)))
74248d22 2495
a8714bf6
RW		 2496(define-public python-ccm
2497 (package
2498 (name "python-ccm")
2499 (version "2.1.6")
2500 (source
2501 (origin
2502 (method url-fetch)
2503 (uri (pypi-uri "ccm" version))
2504 (sha256
2505 (base32
2506 "177dfxsmk3k4cih6fh6v8d91bh4nqx7ns6pc07w7m7i3cvdx3c8n"))))
2507 (build-system python-build-system)
2508 (propagated-inputs
2509 `(("python-pyyaml" ,python-pyyaml)
2510 ;; Not listed in setup.py, but used in ccmlib/node.py for full
2511 ;; functionality
2512 ("python-psutil" ,python-psutil)
2513 ("python-six" ,python-six)))
2514 (home-page "https://github.com/pcmanus/ccm")
2515 (synopsis "Cassandra Cluster Manager for Apache Cassandra clusters on
2516localhost")
2517 (description "Cassandra Cluster Manager is a development tool for testing
2518local Cassandra clusters. It creates, launches and removes Cassandra clusters
2519on localhost.")
2520 (license license:asl2.0)))
2521
2522(define-public python2-ccm
2523 (package-with-python2 python-ccm))
2524
2525(define-public python2-pysqlite
2526 (package
2527 (name "python2-pysqlite")
2528 (version "2.8.3")
2529 (source
2530 (origin
2531 (method url-fetch)
2532 (uri (pypi-uri "pysqlite" version))
2533 (sha256
2534 (base32
2535 "1424gwq9sil2ffmnizk60q36vydkv8rxs6m7xs987kz8cdc37lqp"))))
2536 (build-system python-build-system)
2537 (inputs
2538 `(("sqlite" ,sqlite)))
2539 (arguments
2540 `(#:python ,python-2 ; incompatible with Python 3
2541 #:tests? #f)) ; no test target
2542 (home-page "https://github.com/ghaering/pysqlite")
2543 (synopsis "SQLite bindings for Python")
2544 (description
2545 "Pysqlite provides SQLite bindings for Python that comply to the
2546Database API 2.0T.")
2547 (license license:zlib)))
2548
2549(define-public python-sqlalchemy
2550 (package
2551 (name "python-sqlalchemy")
7d5f0795 2552 (version "1.3.15")
a8714bf6
RW		 2553 (source
2554 (origin
2555 (method url-fetch)
aeec4a8f 2556 (uri (pypi-uri "SQLAlchemy" version))
a8714bf6 2557 (sha256
7d5f0795 2558 (base32 "0iglkvymfp35zm5pxy5kzqvcv96kkas0chqdx7xpla86sspa9k64"))))
a8714bf6
RW		 2559 (build-system python-build-system)
2560 (native-inputs
6d04f694 2561 `(("python-cython" ,python-cython) ; for C extensions
a8714bf6 2562 ("python-pytest" ,python-pytest)
6d04f694 2563 ("python-mock" ,python-mock))) ; for tests
a8714bf6
RW		 2564 (arguments
2565 `(#:phases
2566 (modify-phases %standard-phases
2567 (replace 'check
9871a896 2568 (lambda _ (invoke "py.test"))))))
5cfe650b 2569 (home-page "https://www.sqlalchemy.org")
a8714bf6
RW		 2570 (synopsis "Database abstraction library")
2571 (description
2572 "SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that
2573gives application developers the full power and flexibility of SQL. It
2574provides a full suite of well known enterprise-level persistence patterns,
2575designed for efficient and high-performing database access, adapted into a
2576simple and Pythonic domain language.")
2577 (license license:x11)))
2578
2579(define-public python2-sqlalchemy
2580 (package-with-python2 python-sqlalchemy))
2581
2582(define-public python-sqlalchemy-utils
2583 (package
2584 (name "python-sqlalchemy-utils")
53ae35e4 2585 (version "0.32.21")
a8714bf6
RW		 2586 (source
2587 (origin
2588 (method url-fetch)
2589 (uri (pypi-uri "SQLAlchemy-Utils" version))
2590 (sha256
2591 (base32
53ae35e4 2592 "1myn71dn8j74xglyh46f12sh8ywb7j0j732rzwq70kvwwnq32m73"))))
a8714bf6
RW		 2593 (build-system python-build-system)
2594 (arguments
2595 '(#:tests? #f)) ; FIXME: Many tests require a running database server.
2596 ;; #:phases
2597 ;; (modify-phases %standard-phases
2598 ;; (replace 'check
2599 ;; (lambda _
2600 ;; (zero? (system* "py.test" "sqlalchemy_utils" "tests")))))
2601 (propagated-inputs
2602 `(("python-six" ,python-six)
2603 ("python-sqlalchemy" ,python-sqlalchemy)))
2604 (native-inputs
2605 `(("python-dateutil" ,python-dateutil)
2606 ("python-flexmock" ,python-flexmock)
2607 ("python-psycopg2" ,python-psycopg2)
2608 ("python-pytest" ,python-pytest)
2609 ("python-pytz" ,python-pytz)))
2610 (home-page "https://github.com/kvesteri/sqlalchemy-utils")
2611 (synopsis "Various utility functions for SQLAlchemy")
2612 (description
2613 "SQLAlchemy-utils provides various utility functions and custom data types
2614for SQLAlchemy. SQLAlchemy is an SQL database abstraction library for Python.
2615
2616You might also want to install the following optional dependencies:
2617@enumerate
2618@item @code{python-passlib}
2619@item @code{python-babel}
2620@item @code{python-cryptography}
2621@item @code{python-pytz}
2622@item @code{python-psycopg2}
2623@item @code{python-furl}
2624@item @code{python-flask-babel}
2625@end enumerate
2626")
2627 (license license:bsd-3)))
2628
2629(define-public python2-sqlalchemy-utils
2630 (package-with-python2 python-sqlalchemy-utils))
2631
2632(define-public python-alembic
2633 (package
2634 (name "python-alembic")
45ebd90c 2635 (version "1.4.1")
a8714bf6
RW		 2636 (source
2637 (origin
2638 (method url-fetch)
2639 (uri (pypi-uri "alembic" version))
45ebd90c 2640 (patches (search-patches "python-alembic-exceptions-cause.patch"))
a8714bf6
RW		 2641 (sha256
2642 (base32
45ebd90c 2643 "0a4hzn76csgbf1px4f5vfm256byvjrqkgi9869nkcjrwjn35c6kr"))))
a8714bf6 2644 (build-system python-build-system)
45ebd90c
MB		 2645 (arguments
2646 '(#:phases (modify-phases %standard-phases
2647 (replace 'check
2648 (lambda _
2649 (invoke "pytest" "-vv"))))))
a8714bf6
RW		 2650 (native-inputs
2651 `(("python-mock" ,python-mock)
2652 ("python-pytest-cov" ,python-pytest-cov)))
2653 (propagated-inputs
2654 `(("python-dateutil" ,python-dateutil)
2655 ("python-sqlalchemy" ,python-sqlalchemy)
2656 ("python-mako" ,python-mako)
2657 ("python-editor" ,python-editor)))
a7f27da7 2658 (home-page "https://bitbucket.org/zzzeek/alembic")
6743080c 2659 (synopsis "Database migration tool for SQLAlchemy")
a8714bf6
RW		 2660 (description
2661 "Alembic is a lightweight database migration tool for usage with the
2662SQLAlchemy Database Toolkit for Python.")
2663 (license license:expat)))
2664
2665(define-public python2-alembic
2666 (package-with-python2 python-alembic))
2667
2668(define-public python-pickleshare
2669 (package
2670 (name "python-pickleshare")
f825faa5 2671 (version "0.7.5")
a8714bf6
RW		 2672 (source
2673 (origin
2674 (method url-fetch)
ed519b3c 2675 (uri (pypi-uri "pickleshare" version))
a8714bf6 2676 (sha256
f825faa5 2677 (base32 "1jmghg3c53yp1i8cm6pcrm280ayi8621rwyav9fac7awjr3kss47"))))
a8714bf6 2678 (build-system python-build-system)
ff856cfd
MB		 2679 (arguments
2680 `(#:phases (modify-phases %standard-phases
2681 (replace 'check
2682 (lambda _
2683 (invoke "pytest"))))))
2684 (native-inputs
2685 `(("python-pytest" ,python-pytest)))
a8714bf6
RW		 2686 (home-page "https://github.com/vivainio/pickleshare")
2687 (synopsis "Tiny key value database with concurrency support")
2688 (description
2689 "PickleShare is a small ‘shelve’-like datastore with concurrency support.
2690Like shelve, a PickleShareDB object acts like a normal dictionary. Unlike
2691shelve, many processes can access the database simultaneously. Changing a
2692value in database is immediately visible to other processes accessing the same
2693database. Concurrency is possible because the values are stored in separate
2694files. Hence the “database” is a directory where all files are governed by
2695PickleShare.")
ed519b3c 2696 (properties `((python2-variant . ,(delay python2-pickleshare))))
a8714bf6
RW		 2697 (license license:expat)))
2698
2699(define-public python2-pickleshare
ed519b3c
MB		 2700 (let ((pickleshare (package-with-python2
2701 (strip-python2-variant python-pickleshare))))
2702 (package (inherit pickleshare)
2703 (propagated-inputs `(("python2-pathlib2" ,python2-pathlib2)
2704 ,@(package-propagated-inputs pickleshare))))))
a8714bf6
RW		 2705
2706(define-public python-apsw
2707 (package
2708 (name "python-apsw")
d05e3b08 2709 (version "3.31.1-r1")
a8714bf6
RW		 2710 (source
2711 (origin
2712 (method url-fetch)
9930beb8
EF		 2713 (uri (string-append "https://github.com/rogerbinns/apsw/releases"
2714 "/download/" version "/apsw-" version ".zip"))
a8714bf6
RW		 2715 (sha256
2716 (base32
d05e3b08 2717 "1gap5lr6c7bp134nzvfwr693i6d0fqyaysg3ms2cayjldv616yfx"))))
a8714bf6 2718 (build-system python-build-system)
9930beb8
EF		 2719 (native-inputs
2720 `(("unzip" ,unzip)))
a8714bf6 2721 (inputs
c553b08b 2722 `(("sqlite" ,sqlite)))
a8714bf6
RW		 2723 (arguments
2724 `(#:phases
2725 (modify-phases %standard-phases
2726 (replace 'build
2727 (lambda _
c553b08b
EF		 2728 (invoke "python" "setup.py" "build" "--enable-all-extensions")
2729 #t))
a8714bf6
RW		 2730 (add-after 'build 'build-test-helper
2731 (lambda _
c553b08b
EF		 2732 (invoke "gcc" "-fPIC" "-shared" "-o" "./testextension.sqlext"
2733 "-I." "-Isqlite3" "src/testextension.c")
2734 #t))
53a9970e 2735 (replace 'check
a8714bf6
RW		 2736 (lambda* (#:key inputs outputs #:allow-other-keys)
2737 (add-installed-pythonpath inputs outputs)
c553b08b
EF		 2738 (invoke "python" "setup.py" "test")
2739 #t)))))
a8714bf6
RW		 2740 (home-page "https://github.com/rogerbinns/apsw/")
2741 (synopsis "Another Python SQLite Wrapper")
2742 (description "APSW is a Python wrapper for the SQLite
2743embedded relational database engine. In contrast to other wrappers such as
2744pysqlite it focuses on being a minimal layer over SQLite attempting just to
2745translate the complete SQLite API into Python.")
2746 (license license:zlib)))
2747
2748(define-public python2-apsw
2749 (package-with-python2 python-apsw))
2750
ba0b249d
LDB		 2751(define-public python-aiosqlite
2752 (package
2753 (name "python-aiosqlite")
4b800bff 2754 (version "0.12.0")
ba0b249d
LDB		 2755 (source
2756 (origin
2757 (method url-fetch)
2758 (uri (pypi-uri "aiosqlite" version))
2759 (sha256
2760 (base32
4b800bff 2761 "1w8248yz85xyzvvh4jaxnc59fqil45aka6h82kn1rcih4rjxbnn1"))))
ba0b249d
LDB		 2762 (build-system python-build-system)
2763 (native-inputs
2764 `(("python-aiounittest" ,python-aiounittest)))
2765 (home-page "https://github.com/jreese/aiosqlite")
2766 (synopsis
2767 "Asyncio bridge for sqlite3")
2768 (description
2769 "The package aiosqlite replicates the standard sqlite3 module, but with
2770async versions of all the standard connection and cursor methods, and context
2771managers for automatically closing connections.")
2772 (license license:expat)))
2773
a8714bf6
RW		 2774(define-public python2-neo4j-driver
2775 (package
2776 (name "python2-neo4j-driver")
2777 ;; NOTE: When upgrading to 1.5.0, please add a python3 variant.
2778 (version "1.4.0")
2779 (source (origin
2780 (method url-fetch)
2781 (uri (pypi-uri "neo4j-driver" version))
2782 (sha256
2783 (base32
2784 "011r1vh182p8mm83d8dz9rfnc3l7rf7fd00cyrbyfzi71jmc4g98"))))
2785 (build-system python-build-system)
2786 (arguments
2787 `(#:python ,python-2))
2788 (home-page "https://neo4j.com/developer/python/")
2789 (synopsis "Neo4j driver code written in Python")
2790 (description "This package provides the Neo4j Python driver that connects
2791to the database using Neo4j's binary protocol. It aims to be minimal, while
2792being idiomatic to Python.")
2793 (license license:asl2.0)))
2794
2795(define-public python2-py2neo
2796 (package
2797 (name "python2-py2neo")
2798 (version "3.1.2")
2799 (source (origin
2800 (method url-fetch)
2801 (uri (pypi-uri "py2neo" version))
2802 (sha256
2803 (base32
2804 "1f1q95vqcvlc3nsc33p841swnjdcjazddlq2dzi3qfnjqjrajxw1"))))
2805 (build-system python-build-system)
2806 (arguments
2807 `(#:python ,python-2))
1084e86b 2808 (home-page "https://py2neo.org")
a8714bf6
RW		 2809 (synopsis "Library and toolkit for working with Neo4j in Python")
2810 (description "This package provides a client library and toolkit for
2811working with Neo4j from within Python applications and from the command
2812line. The core library has no external dependencies and has been carefully
2813designed to be easy and intuitive to use.")
2814 (license license:asl2.0)))
2815
2816(define-public python-psycopg2
2817 (package
2818 (name "python-psycopg2")
ab6e4ab8 2819 (version "2.8.4")
a8714bf6
RW		 2820 (source
2821 (origin
2822 (method url-fetch)
2823 (uri (pypi-uri "psycopg2" version))
2824 (sha256
ab6e4ab8 2825 (base32 "1djvh98pi4hjd8rxbq8qzc63bg8v78k33yg6pl99wak61b6fb67q"))))
a8714bf6
RW		 2826 (build-system python-build-system)
2827 (arguments
2828 ;; Tests would require a postgresql database "psycopg2_test"
2829 ;; and a running postgresql database management service.
2830 `(#:tests? #f)) ; TODO re-enable after providing a test-db.
2831 (inputs
2832 `(("postgresql" ,postgresql))) ; libpq
2833 (home-page "http://initd.org/psycopg/")
2834 (synopsis "Python PostgreSQL adapter")
2835 (description
19601e89
BW		 2836 "psycopg2 is a thread-safe PostgreSQL adapter that implements DB-API
28372.0.")
a8714bf6
RW		 2838 (license license:lgpl3+)))
2839
2840(define-public python2-psycopg2
2841 (package-with-python2 python-psycopg2))
2842
2843(define-public python-sadisplay
2844 (package
2845 (name "python-sadisplay")
bcdc5cae 2846 (version "0.4.8")
a8714bf6
RW		 2847 (source
2848 (origin
2849 (method url-fetch)
2850 (uri (pypi-uri "sadisplay" version))
2851 (sha256
2852 (base32
bcdc5cae 2853 "01d9lxhmgpb68gy8rd6zj6fcwp84n2qq210n1qsk3qbsir79bzh4"))))
a8714bf6
RW		 2854 (build-system python-build-system)
2855 (propagated-inputs
2856 `(("python-sqlalchemy" ,python-sqlalchemy)))
2857 (native-inputs
bcdc5cae 2858 ;; For tests.
a8714bf6
RW		 2859 `(("python-nose" ,python-nose)))
2860 (home-page "https://bitbucket.org/estin/sadisplay")
2861 (synopsis "SQLAlchemy schema displayer")
2862 (description "This package provides a program to build Entity
2863Relationship diagrams from a SQLAlchemy model (or directly from the
2864database).")
2865 (license license:bsd-3)))
2866
2867(define-public python2-sadisplay
2868 (package-with-python2 python-sadisplay))
2869
2870(define-public python-mysqlclient
2871 (package
2872 (name "python-mysqlclient")
28635e52 2873 (version "1.3.13")
a8714bf6
RW		 2874 (source
2875 (origin
2876 (method url-fetch)
2877 (uri (pypi-uri "mysqlclient" version))
2878 (sha256
2879 (base32
28635e52 2880 "0kv4a1icwdav8jpl7qvnr931lw5h3v22ids6lwq6qpi1hjzf33pz"))))
a8714bf6
RW		 2881 (build-system python-build-system)
2882 (native-inputs
f94051e6 2883 `(("nose" ,python-nose)
a8714bf6
RW		 2884 ("mock" ,python-mock)
2885 ("py.test" ,python-pytest)))
2886 (inputs
2b8491fb
JL		 2887 `(("mysql" ,mariadb "lib")
2888 ("mysql-dev" ,mariadb "dev")
a8714bf6
RW		 2889 ("libz" ,zlib)
2890 ("openssl" ,openssl)))
2891 (home-page "https://github.com/PyMySQL/mysqlclient-python")
2892 (synopsis "MySQLdb is an interface to the popular MySQL database server for Python")
2893 (description "MySQLdb is an interface to the popular MySQL database server
2894for Python. The design goals are:
2895@enumerate
2896@item Compliance with Python database API version 2.0 [PEP-0249],
2897@item Thread-safety,
2898@item Thread-friendliness (threads will not block each other).
2899@end enumerate")
2900 (license license:gpl2)))
2901
2902(define-public python2-mysqlclient
2903 (package-with-python2 python-mysqlclient))
2904
2905(define-public python-hiredis
2906 (package
2907 (name "python-hiredis")
2908 (version "0.2.0")
2909 (source
2910 (origin
2911 (method url-fetch)
2912 (uri (pypi-uri "hiredis" version))
2913 (sha256
2914 (base32
2915 "1dfm2k9l9zar9nw9fwmm74zrgraxdxs04vx9li56fjcf289qx5fa"))))
2916 (build-system python-build-system)
2917 (arguments
2918 ;; no tests
2919 `(#:tests? #f))
2920 (home-page "https://github.com/redis/hiredis-py")
2921 (synopsis "Python extension that wraps protocol parsing code in hiredis")
2922 (description "Python-hiredis is a python extension that wraps protocol
2923parsing code in hiredis. It primarily speeds up parsing of multi bulk replies.")
2924 (license license:bsd-3)))
2925
2926(define-public python2-hiredis
2927 (package-with-python2 python-hiredis))
2928
2929(define-public python-fakeredis
2930 (package
2931 (name "python-fakeredis")
1655e7be 2932 (version "1.2.1")
a8714bf6
RW		 2933 (source
2934 (origin
2935 (method url-fetch)
2936 (uri (pypi-uri "fakeredis" version))
2937 (sha256
2938 (base32
1655e7be 2939 "1s12mn4q4hz7402139khn9fx56kibj7nn0d6w81hn0zs07b90wpc"))))
a8714bf6
RW		 2940 (build-system python-build-system)
2941 (arguments
2942 ;; no tests
2943 `(#:tests? #f))
1655e7be
TLC		 2944 (propagated-inputs
2945 `(("python-sortedcontainers" ,python-sortedcontainers)))
a8714bf6
RW		 2946 (home-page "https://github.com/jamesls/fakeredis")
2947 (synopsis "Fake implementation of redis API for testing purposes")
a4764ff0
TGR		 2948 (description
2949 "Fakeredis is a pure-Python implementation of the redis-py Python client
2950that simulates talking to a redis server. It was created for a single purpose:
2951to write unit tests.
2952
2953Setting up redis is not hard, but one often wants to write unit tests that don't
2954talk to an external server such as redis. This module can be used as a
2955reasonable substitute.")
a8714bf6
RW		 2956 (license license:bsd-3)))
2957
2958(define-public python2-fakeredis
2959 (package-with-python2 python-fakeredis))
2960
2961(define-public python-redis
2962 (package
2963 (name "python-redis")
23503abb 2964 (version "3.3.8")
a8714bf6
RW		 2965 (source
2966 (origin
2967 (method url-fetch)
2968 (uri (pypi-uri "redis" version))
2969 (sha256
23503abb 2970 (base32 "0fyxzqax7lcwzwhvnz0i0q6v62hxyv1mv52ywx3bpff9a2vjz8lq"))))
a8714bf6 2971 (build-system python-build-system)
a263a976 2972 ;; Tests require a running Redis server.
a8714bf6
RW		 2973 (arguments '(#:tests? #f))
2974 ;; As long as we are not running test, we do not need this input :-)
2975 ;;(native-inputs
2976 ;; `(("python-pytest" ,python-pytest)))
2977 (home-page "https://github.com/andymccurdy/redis-py")
2978 (synopsis "Redis Python client")
2979 (description
2980 "This package provides a Python interface to the Redis key-value store.")
2981 (license license:expat)))
2982
2983(define-public python2-redis
2984 (package-with-python2 python-redis))
2985
2986(define-public python-rq
2987 (package
2988 (name "python-rq")
865c76ea 2989 (version "0.13.0")
a8714bf6
RW		 2990 (source
2991 (origin
2992 (method url-fetch)
2993 (uri (pypi-uri "rq" version))
2994 (sha256
865c76ea 2995 (base32 "0xvapd2bxnyq480i48bdkddzlqmv2axbsq85rlfy8k3al8zxxxrf"))))
a8714bf6
RW		 2996 (build-system python-build-system)
2997 (propagated-inputs
2998 `(("python-click" ,python-click)
2999 ("python-redis" ,python-redis)))
4e5ad79e 3000 (home-page "https://python-rq.org/")
a8714bf6
RW		 3001 (synopsis "Simple job queues for Python")
3002 (description
3003 "RQ (Redis Queue) is a simple Python library for queueing jobs and
3004processing them in the background with workers. It is backed by Redis and it
3005is designed to have a low barrier to entry.")
3006 (license license:bsd-2)))
3007
3008(define-public python2-rq
3009 (package-with-python2 python-rq))
3010
3011(define-public python-trollius-redis
3012 (package
3013 (name "python-trollius-redis")
3014 (version "0.1.4")
3015 (source
3016 (origin
3017 (method url-fetch)
3018 (uri (pypi-uri "trollius_redis" version))
3019 (sha256
3020 (base32
3021 "0k3vypszmgmaipgw9xscvgm79h2zd6p6ci8gdp5sxl6g5kbqr9fy"))))
3022 (build-system python-build-system)
3023 ;; TODO: Tests require packaging 'hiredis'.
3024 (arguments '(#:tests? #f))
3025 (home-page "https://github.com/benjolitz/trollius-redis")
3026 (synopsis "Port of asyncio-redis to trollius")
3027 (description "@code{trollius-redis} is a Redis client for Python
d087a3a6 3028 trollius. It is an asynchronous IO (PEP 3156) implementation of the
a8714bf6
RW		 3029 Redis protocol.")
3030 (license license:bsd-2)))
3031
3032(define-public python2-trollius-redis
3033 (package-with-python2 python-trollius-redis))
3034
3035(define-public python-sqlparse
3036 (package
3037 (name "python-sqlparse")
3038 (version "0.2.4")
3039 (source (origin
3040 (method url-fetch)
3041 (uri (pypi-uri "sqlparse" version))
3042 (sha256
3043 (base32
3044 "1v3xh0bkfhb262dbndgzhivpnhdwavdzz8jjhx9vx0xbrx2880nf"))))
3045 (build-system python-build-system)
3046 (arguments
3047 `(#:phases
3048 (modify-phases %standard-phases
3049 (replace 'check
96272e28 3050 (lambda _ (invoke "py.test"))))))
a8714bf6
RW		 3051 (native-inputs
3052 `(("python-pytest" ,python-pytest)))
3053 (home-page "https://github.com/andialbrecht/sqlparse")
3054 (synopsis "Non-validating SQL parser")
3055 (description "Sqlparse is a non-validating SQL parser for Python. It
3056provides support for parsing, splitting and formatting SQL statements.")
3057 (license license:bsd-3)))
3058
3059(define-public python2-sqlparse
3060 (package-with-python2 python-sqlparse))
3061
3062(define-public python-sql
3063 (package
3064 (name "python-sql")
909404b5 3065 (version "1.0.0")
a8714bf6
RW		 3066 (source
3067 (origin
3068 (method url-fetch)
3069 (uri (pypi-uri "python-sql" version))
3070 (sha256
909404b5 3071 (base32 "05ni936y0ia9xmryl7mlhbj9i80nnvq1bi4zxhb96rv7yvpb3fqb"))))
a8714bf6
RW		 3072 (build-system python-build-system)
3073 (home-page "https://python-sql.tryton.org/")
3074 (synopsis "Library to write SQL queries in a pythonic way")
3075 (description "@code{python-sql} is a library to write SQL queries, that
3076transforms idiomatic python function calls to well-formed SQL queries.")
3077 (license license:bsd-3)))
3078
3079(define-public python2-sql
3080 (package-with-python2 python-sql))
33c88fcb 3081
c8fdf86d
LDB		 3082(define-public python-pypika
3083 (package
3084 (name "python-pypika")
510472f8 3085 (version "0.37.2")
c8fdf86d 3086 (source
510472f8
LDB		 3087 (origin (method git-fetch)
3088 (uri (git-reference
3089 (url "https://github.com/kayak/pypika.git")
3090 (commit (string-append "v" version))))
3091 (file-name (git-file-name name version))
3092 (sha256
3093 (base32
3094 "089z1c778q1fwhzsc88ws8j5gm2hgxknibabn4wpax8rz2bfs3ck"))))
c8fdf86d
LDB		 3095 (build-system python-build-system)
3096 (native-inputs
3097 `(("python-parameterized" ,python-parameterized)))
3098 (home-page "https://github.com/kayak/pypika")
3099 (synopsis "SQL query builder API for Python")
3100 (description
3101 "PyPika is a python SQL query builder that exposes the full richness of
3102the SQL language using a syntax that reflects the resulting query.")
3103 (license license:asl2.0)))
3104
33c88fcb
CB		 3105(define-public mongo-tools
3106 (package
3107 (name "mongo-tools")
3108 (version "3.4.0")
3109 (source
3110 (origin (method git-fetch)
3111 (uri (git-reference
3112 (url "https://github.com/mongodb/mongo-tools")
3113 (commit (string-append "r" version))))
3114 (file-name (git-file-name name version))
3115 (sha256
3116 (base32
9b32bf6e 3117 "1bcsz5cvj39a7nsxsfqmz9igrw33j6yli9kffigqyscs52amw7x1"))))
33c88fcb
CB		 3118 (build-system go-build-system)
3119 (arguments
9b32bf6e
CB		 3120 `(#:import-path "github.com/mongodb/mongo-tools"
3121 #:modules ((srfi srfi-1)
3122 (guix build go-build-system)
3123 (guix build utils))
e3900a4d 3124 #:install-source? #f
33c88fcb 3125 #:phases
9b32bf6e
CB		 3126 (let ((all-tools
3127 '("bsondump" "mongodump" "mongoexport" "mongofiles"
3128 "mongoimport" "mongooplog" "mongorestore"
3129 "mongostat" "mongotop")))
3130 (modify-phases %standard-phases
3131 (add-after 'unpack 'delete-bundled-source-code
3132 (lambda _
3133 (delete-file-recursively
3134 "src/github.com/mongodb/mongo-tools/vendor")
3135 #t))
fe596965
CB		 3136 (add-after 'delete-bundled-source-code 'patch-source
3137 (lambda _
3138 ;; Remove a redundant argument that causes compilation to fail.
3139 (substitute*
3140 "src/github.com/mongodb/mongo-tools/mongorestore/filepath.go"
3141 (("skipping restore of system.profile collection\", db)")
3142 "skipping restore of system.profile collection\")"))
3143 #t))
9b32bf6e
CB		 3144 (replace 'build
3145 (lambda _
96272e28
MW		 3146 (for-each (lambda (tool)
3147 (let ((command
3148 `("go" "build"
3149 ;; This is where the tests expect to find the
3150 ;; executables
3151 "-o" ,(string-append
3152 "src/github.com/mongodb/mongo-tools/bin/"
3153 tool)
3154 "-v"
3155 "-tags=\"ssl sasl\""
3156 "-ldflags"
3157 "-extldflags=-Wl,-z,now,-z,relro"
3158 ,(string-append
3159 "src/github.com/mongodb/mongo-tools/"
3160 tool "/main/" tool ".go"))))
3161 (simple-format #t "build: running ~A\n"
3162 (string-join command))
3163 (apply invoke command)))
3164 all-tools)
3165 #t))
9b32bf6e
CB		 3166 (replace 'check
3167 (lambda _
3168 (with-directory-excursion "src"
96272e28
MW		 3169 (for-each (lambda (tool)
3170 (invoke
3171 "go" "test" "-v"
3172 (string-append "github.com/mongodb/mongo-tools/"
3173 tool)))
3174 all-tools))
3175 #t))
9b32bf6e
CB		 3176 (replace 'install
3177 (lambda* (#:key outputs #:allow-other-keys)
3178 (for-each (lambda (tool)
3179 (install-file
96272e28
MW		 3180 (string-append "src/github.com/mongodb/mongo-tools/bin/"
3181 tool)
9b32bf6e
CB		 3182 (string-append (assoc-ref outputs "out")
3183 "/bin")))
96272e28
MW		 3184 all-tools)
3185 #t))))))
33c88fcb
CB		 3186 (native-inputs
3187 `(("go-github.com-howeyc-gopass" ,go-github.com-howeyc-gopass)
3188 ("go-github.com-jessevdk-go-flags" ,go-github.com-jessevdk-go-flags)
561d391b 3189 ("go-golang-org-x-crypto" ,go-golang-org-x-crypto)
33c88fcb
CB		 3190 ("go-gopkg.in-mgo.v2" ,go-gopkg.in-mgo.v2)
3191 ("go-gopkg.in-tomb.v2" ,go-gopkg.in-tomb.v2)
9b32bf6e
CB		 3192 ("go-github.com-nsf-termbox-go" ,go-github.com-nsf-termbox-go)
3193 ("go-github.com-smartystreets-goconvey" ,go-github.com-smartystreets-goconvey)))
33c88fcb
CB		 3194 (home-page "https://github.com/mongodb/mongo-tools")
3195 (synopsis "Various tools for interacting with MongoDB and BSON")
3196 (description
3197 "This package includes a collection of tools related to MongoDB.
3198@table @code
3199@item bsondump
3200Display BSON files in a human-readable format
3201@item mongoimport
3202Convert data from JSON, TSV or CSV and insert them into a collection
3203@item mongoexport
3204Write an existing collection to CSV or JSON format
3205@item mongodump/mongorestore
3206Dump MongoDB backups to disk in the BSON format
3207@item mongorestore
3208Read MongoDB backups in the BSON format, and restore them to a live database
3209@item mongostat
3210Monitor live MongoDB servers, replica sets, or sharded clusters
3211@item mongofiles
3212Read, write, delete, or update files in GridFS
3213@item mongooplog
3214Replay oplog entries between MongoDB servers
3215@item mongotop
3216Monitor read/write activity on a mongo server
3217@end table")
3218 (license license:asl2.0)))
dae7661a
LF		 3219
3220(define-public apache-arrow
3221 (package
3222 (name "apache-arrow")
e58d3a59 3223 (version "0.10.0")
dae7661a
LF		 3224 (source
3225 (origin
3226 (method git-fetch)
3227 (uri (git-reference
3228 (url "https://github.com/apache/arrow")
3229 (commit (string-append "apache-arrow-" version))))
3230 (file-name (git-file-name name version))
3231 (sha256
e58d3a59
RW		 3232 (base32
3233 "04xkp922b8qrrnpvv9ixxnvk7151n1plzx6aqdff6frn9651zvxs"))))
dae7661a
LF		 3234 (build-system cmake-build-system)
3235 (arguments
3236 `(#:tests? #f
3237 #:phases
3238 (modify-phases %standard-phases
3239 (add-before 'configure 'enter-source-directory
3240 (lambda _ (chdir "cpp") #t))
3241 (add-after 'unpack 'set-env
3242 (lambda _
3243 (setenv "BOOST_ROOT" (assoc-ref %build-inputs "boost"))
3244 (setenv "BROTLI_HOME" (assoc-ref %build-inputs "brotli"))
3245 (setenv "FLATBUFFERS_HOME" (assoc-ref %build-inputs "flatbuffers"))
3246 (setenv "JEMALLOC_HOME" (assoc-ref %build-inputs "jemalloc"))
3247 (setenv "RAPIDJSON_HOME" (assoc-ref %build-inputs "rapidjson"))
3248 #t)))
3def739d 3249 #:build-type "Release"
dae7661a 3250 #:configure-flags
3def739d 3251 (list "-DARROW_PYTHON=ON"
dae7661a
LF		 3252
3253 ;; Install to PREFIX/lib (the default is
3254 ;; PREFIX/lib64).
3255 (string-append "-DCMAKE_INSTALL_LIBDIR="
3256 (assoc-ref %outputs "out")
3257 "/lib")
3258
3259 ;; XXX These Guix package offer static
3260 ;; libraries that are not position independent,
3261 ;; and ld fails to link them into the arrow .so
3262 "-DARROW_WITH_SNAPPY=OFF"
3263 "-DARROW_WITH_ZLIB=OFF"
3264 "-DARROW_WITH_ZSTD=OFF"
3265 "-DARROW_WITH_LZ4=OFF"
3266
3267 ;; Building the tests forces on all the
3268 ;; optional features and the use of static
3269 ;; libraries.
3270 "-DARROW_BUILD_TESTS=OFF"
3271 "-DARROW_BUILD_STATIC=OFF")))
3272 (inputs
3273 `(("boost" ,boost)
3274 ("rapidjson" ,rapidjson)
3275 ("brotli" ,google-brotli)
3276 ("flatbuffers" ,flatbuffers)
e58d3a59 3277 ("jemalloc" ,jemalloc)
dae7661a
LF		 3278 ("python-3" ,python)
3279 ("python-numpy" ,python-numpy)))
3280 (home-page "https://arrow.apache.org/")
3281 (synopsis "Columnar in-memory analytics")
3282 (description "Apache Arrow is a columnar in-memory analytics layer
3283designed to accelerate big data. It houses a set of canonical in-memory
3284representations of flat and hierarchical data along with multiple
3285language-bindings for structure manipulation. It also provides IPC and common
3286algorithm implementations.")
3287 (license license:asl2.0)))
5e5ac710
LF		 3288
3289(define-public python-pyarrow
3290 (package
3291 (name "python-pyarrow")
0fa926c2 3292 (version "0.10.0")
5e5ac710
LF		 3293 (source
3294 (origin
3295 (method git-fetch)
3296 (uri (git-reference
3297 (url "https://github.com/apache/arrow")
3298 (commit (string-append "apache-arrow-" version))))
3299 (file-name (git-file-name name version))
3300 (sha256
0fa926c2
RW		 3301 (base32
3302 "04xkp922b8qrrnpvv9ixxnvk7151n1plzx6aqdff6frn9651zvxs"))))
5e5ac710
LF		 3303 (build-system python-build-system)
3304 (arguments
0fa926c2 3305 '(#:tests? #f ; XXX There are no tests in the "python" directory
5e5ac710
LF		 3306 #:phases
3307 (modify-phases %standard-phases
0fa926c2 3308 (delete 'build) ; XXX the build is performed again during the install phase
5e5ac710
LF		 3309 (add-after 'unpack 'enter-source-directory
3310 (lambda _ (chdir "python") #t))
3311 (add-after 'unpack 'set-env
3312 (lambda _
3313 (setenv "ARROW_HOME" (assoc-ref %build-inputs "apache-arrow"))
3314 #t)))))
3315 (propagated-inputs
3316 `(("apache-arrow" ,apache-arrow)
3317 ("python-numpy" ,python-numpy)
3318 ("python-pandas" ,python-pandas)
3319 ("python-six" ,python-six)))
3320 (native-inputs
c69959f0 3321 `(("cmake" ,cmake-minimal)
5e5ac710
LF		 3322 ("python-cython" ,python-cython)
3323 ("python-pytest" ,python-pytest)
0fa926c2 3324 ("python-pytest-runner" ,python-pytest-runner)
5e5ac710
LF		 3325 ("python-setuptools-scm" ,python-setuptools-scm)))
3326 (home-page "https://arrow.apache.org/docs/python/")
3327 (synopsis "Python bindings for Apache Arrow")
3328 (description "This library provides a Pythonic API wrapper for the reference
3329Arrow C++ implementation, along with tools for interoperability with pandas,
3330NumPy, and other traditional Python scientific computing packages.")
3331 (license license:asl2.0)))
3332
3333(define-public python2-pyarrow
3334 (package-with-python2 python-pyarrow))
450d5dc2
PL		 3335
3336(define-public python-crate
3337 (package
3338 (name "python-crate")
19181820 3339 (version "0.23.2")
450d5dc2
PL		 3340 (source (origin
3341 (method url-fetch)
3342 (uri (pypi-uri "crate" version))
3343 (sha256
3344 (base32
19181820 3345 "0ngmlvi320c5gsxab0s7qgq0ck4jdlcwvb6lbjhnfprafdp56vvx"))))
450d5dc2
PL		 3346 (build-system python-build-system)
3347 (propagated-inputs
3348 `(("python-urllib3" ,python-urllib3)))
3349 (home-page "https://github.com/crate/crate-python")
3350 (synopsis "CrateDB Python client")
3351 (description
3352 "This package provides a Python client library for CrateDB.
3353It implements the Python DB API 2.0 specification and includes support for
3354SQLAlchemy.")
3355 (license license:asl2.0)))
ae8a0184
GLV		 3356
3357(define-public libdbi
3358 (package
3359 (name "libdbi")
3360 (version "0.9.0")
3361 (source (origin
3362 (method url-fetch)
3363 (uri (string-append "mirror://sourceforge/libdbi/libdbi/libdbi-"
3364 version "/libdbi-" version ".tar.gz"))
3365 (sha256
3366 (base32
3367 "00s5ra7hdlq25iv23nwf4h1v3kmbiyzx0v9bhggjiii4lpf6ryys"))))
3368 (build-system gnu-build-system)
3369 (synopsis "Database independent abstraction layer in C")
3370 (description
3371 "This library implements a database independent abstraction layer in C,
3372similar to the DBI/DBD layer in Perl. Writing one generic set of code,
3373programmers can leverage the power of multiple databases and multiple
3374simultaneous database connections by using this framework.")
3375 (home-page "http://libdbi.sourceforge.net/")
3376 (license license:lgpl2.1+)))
df81de86
GLV		 3377
3378(define-public libdbi-drivers
3379 (package
3380 (name "libdbi-drivers")
3381 (version "0.9.0")
3382 (source (origin
3383 (method url-fetch)
3384 (uri (string-append "mirror://sourceforge/libdbi-drivers/"
3385 "libdbi-drivers/libdbi-drivers-" version
3386 "/libdbi-drivers-" version ".tar.gz"))
3387 (sha256
3388 (base32
3389 "0m680h8cc4428xin4p733azysamzgzcmv4psjvraykrsaz6ymlj3"))))
3390 (build-system gnu-build-system)
3391 (native-inputs
9077cf68
MB		 3392 `(;; For tests.
3393 ("inetutils" ,inetutils)
3394 ("glibc-locales" ,glibc-locales)
ca69163c 3395 ("mariadb" ,mariadb)))
df81de86
GLV		 3396 (inputs
3397 `(("libdbi" ,libdbi)
9077cf68
MB		 3398 ("mariadb:dev" ,mariadb "dev")
3399 ("mariadb:lib" ,mariadb "lib")
df81de86
GLV		 3400 ("postgresql" ,postgresql)
3401 ("sqlite" ,sqlite)))
3402 (arguments
3403 `(#:configure-flags
3404 (let ((libdbi (assoc-ref %build-inputs "libdbi"))
9077cf68
MB		 3405 (mysql:inc (assoc-ref %build-inputs "mariadb:dev"))
3406 (mysql:lib (assoc-ref %build-inputs "mariadb:lib"))
df81de86
GLV		 3407 (postgresql (assoc-ref %build-inputs "postgresql"))
3408 (sqlite (assoc-ref %build-inputs "sqlite")))
3409 (list "--disable-docs"
3410 (string-append "--with-dbi-incdir=" libdbi "/include")
3411 (string-append "--with-dbi-libdir=" libdbi "/lib")
3412 "--with-mysql"
9077cf68
MB		 3413 (string-append "--with-mysql-incdir=" mysql:inc "/include/mysql")
3414 (string-append "--with-mysql-libdir=" mysql:lib "/lib")
df81de86
GLV		 3415 "--with-pgsql"
3416 (string-append "--with-pgsql-incdir=" postgresql "/include")
3417 (string-append "--with-pgsql-libdir=" postgresql "/lib")
3418 "--with-sqlite3"
3419 (string-append "--with-sqlite-incdir=" sqlite "/include")
3420 (string-append "--with-sqlite-libdir=" sqlite "/lib")))
3421 #:phases
3422 (modify-phases %standard-phases
3423 (add-after 'unpack 'fix-tests
3424 (lambda* (#:key inputs #:allow-other-keys)
3425 (substitute* "tests/test_mysql.sh"
3426 (("^MYMYSQLD=.*")
3427 (string-append "MYMYSQLD="
9077cf68 3428 (assoc-ref inputs "mariadb")
df81de86
GLV		 3429 "/bin/mysqld")))
3430 #t))
3431 (add-after 'install 'remove-empty-directories
3432 (lambda* (#:key outputs #:allow-other-keys)
3433 (let ((var (string-append (assoc-ref outputs "out") "/var")))
3434 (delete-file-recursively var))
3435 #t)))))
3436 (synopsis "Database drivers for the libdbi framework")
3437 (description
3438 "The @code{libdbi-drivers} library provides the database specific drivers
3439for the @code{libdbi} framework.
3440
3441The drivers officially supported by @code{libdbi} are:
3442@itemize
3443@item MySQL,
3444@item PostgreSQL,
3445@item SQLite.
3446@end itemize")
3447 (home-page "http://libdbi-drivers.sourceforge.net/")
3448 (license license:lgpl2.1+)))
6d26ee3b
PN		 3449
3450(define-public soci
3451 (package
3452 (name "soci")
3453 (version "4.0.0")
3454 (source (origin
3455 (method git-fetch)
3456 (uri (git-reference
3457 (url "https://github.com/SOCI/soci/")
3458 (commit version)))
3459 (file-name (git-file-name name version))
3460 (sha256
3461 (base32
3462 "06faswdxd2frqr9xnx6bxc7zwarlzsbdi3bqpz7kwdxsjvq41rnb"))))
3463 (build-system cmake-build-system)
3464 (inputs
3465 `(("postgresql" ,postgresql)
3466 ("sqlite" ,sqlite)
3467 ("odbc" ,unixodbc)
3468 ("boost" ,boost)
1ce65f5c
MB		 3469 ("mariadb:dev" ,mariadb "dev")
3470 ("mariadb:lib" ,mariadb "lib")))
6d26ee3b
PN		 3471 (arguments
3472 `(#:tests? #f ; Tests may require running database management systems.
3473 #:phases
3474 (modify-phases %standard-phases
3475 (add-after 'unpack 'fix-lib-path
3476 (lambda _
3477 (substitute* "CMakeLists.txt"
85a906dc
MB		 3478 (("set\\(SOCI_LIBDIR \"lib64\"\\)") ""))
3479 #t)))))
6d26ee3b
PN		 3480 (synopsis "C++ Database Access Library")
3481 (description
3482 "SOCI is an abstraction layer for several database backends, including
3483PostreSQL, SQLite, ODBC and MySQL.")
3484 (home-page "http://soci.sourceforge.net/")
3485 (license license:boost1.0)))
jackhill's copy of GNU Guix: https://guix.gnu.org/