gexp: Allow character literals in GEXP->SEXP.
[jackhill/guix/guix.git] / gnu / packages / databases.scm
CommitLineData
5f96f303 1;;; GNU Guix --- Functional package management for GNU
189be331 2;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2018 Ludovic Courtès <ludo@gnu.org>
a8714bf6
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3;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr>
4;;; Copyright © 2013, 2017 Cyril Roelandt <tipecaml@gmail.com>
218a2106 5;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org>
b9ed5ef3 6;;; Copyright © 2014, 2015, 2016, 2018 Mark H Weaver <mhw@netris.org>
a8714bf6 7;;; Copyright © 2014, 2015 Eric Bavier <bavier@member.fsf.org>
da1f7a9e 8;;; Copyright © 2015, 2016 Sou Bunnbu <iyzsong@gmail.com>
b747a9db 9;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
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10;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
11;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
12;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org>
c007e35d 13;;; Copyright © 2015, 2016, 2017, 2018, 2019 Efraim Flashner <efraim@flashner.co.il>
47956fa0 14;;; Copyright © 2016, 2017 ng0 <ng0@n0.is>
6d09a7b5 15;;; Copyright © 2016, 2017, 2018 Roel Janssen <roel@gnu.org>
0e1b262e 16;;; Copyright © 2016 David Craven <david@craven.ch>
fe71eee0 17;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
62ea44fc 18;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca>
a8714bf6 19;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org>
7fa9cca8 20;;; Copyright © 2016, 2017, 2018 Marius Bakke <mbakke@fastmail.com>
c336567d 21;;; Copyright © 2017, 2018 Julien Lepiller <julien@lepiller.eu>
259a94e9 22;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be>
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23;;; Copyright © 2017 Jelle Licht <jlicht@fsfe.org>
24;;; Copyright © 2017 Adriano Peluso <catonano@gmail.com>
d39a84e8 25;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
245e7a68 26;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
38abef12 27;;; Copyright © 2017, 2018 Alex Vong <alexvong1995@gmail.com>
19601e89 28;;; Copyright © 2017, 2018 Ben Woodcroft <donttrustben@gmail.com>
231123ee 29;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
7bcc3405 30;;; Copyright © 2017, 2018 Pierre Langlois <pierre.langlois@gmx.com>
e58d3a59 31;;; Copyright © 2015, 2017, 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
16973071 32;;; Copyright © 2017 Kristofer Buffington <kristoferbuffington@gmail.com>
3926a099 33;;; Copyright © 2018 Amirouche Boubekki <amirouche@hypermove.net>
dae7661a 34;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
da602679 35;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com>
9df78675 36;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us>
a3abc3fd 37;;; Copyright © 2019 Alex Griffin <a@ajgrf.com>
91477def 38;;; Copyright © 2019 Gábor Boskovits <boskovits@gmail.com>
450d5dc2 39;;; Copyright © 2019 Pierre Langlois <pierre.langlois@gmx.com>
ae8a0184 40;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
5f96f303
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41;;;
42;;; This file is part of GNU Guix.
43;;;
44;;; GNU Guix is free software; you can redistribute it and/or modify it
45;;; under the terms of the GNU General Public License as published by
46;;; the Free Software Foundation; either version 3 of the License, or (at
47;;; your option) any later version.
48;;;
49;;; GNU Guix is distributed in the hope that it will be useful, but
50;;; WITHOUT ANY WARRANTY; without even the implied warranty of
51;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
52;;; GNU General Public License for more details.
53;;;
54;;; You should have received a copy of the GNU General Public License
55;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
56
57(define-module (gnu packages databases)
58 #:use-module (gnu packages)
58071723 59 #:use-module (gnu packages admin)
06a035db 60 #:use-module (gnu packages algebra)
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61 #:use-module (gnu packages autotools)
62 #:use-module (gnu packages avahi)
77e52190 63 #:use-module (gnu packages base)
b747a9db 64 #:use-module (gnu packages bash)
06a035db 65 #:use-module (gnu packages bison)
23bbd7dd 66 #:use-module (gnu packages boost)
06a035db 67 #:use-module (gnu packages check)
dae7661a 68 #:use-module (gnu packages cmake)
06a035db 69 #:use-module (gnu packages compression)
62ea44fc 70 #:use-module (gnu packages crypto)
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71 #:use-module (gnu packages curl)
72 #:use-module (gnu packages cyrus-sasl)
255d1bbe 73 #:use-module (gnu packages dbm)
06a035db 74 #:use-module (gnu packages emacs)
da602679 75 #:use-module (gnu packages flex)
2fa55c72 76 #:use-module (gnu packages gcc)
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77 #:use-module (gnu packages gettext)
78 #:use-module (gnu packages glib)
06a035db 79 #:use-module (gnu packages gnupg)
16973071 80 #:use-module (gnu packages guile)
da1f7a9e 81 #:use-module (gnu packages time)
33c88fcb 82 #:use-module (gnu packages golang)
06a035db 83 #:use-module (gnu packages jemalloc)
708155df 84 #:use-module (gnu packages language)
686144e9 85 #:use-module (gnu packages libevent)
5f96f303 86 #:use-module (gnu packages linux)
d39a84e8 87 #:use-module (gnu packages man)
5f96f303 88 #:use-module (gnu packages ncurses)
aace6f6d 89 #:use-module (gnu packages onc-rpc)
d3c6ad0a 90 #:use-module (gnu packages parallel)
77631745 91 #:use-module (gnu packages pcre)
06a035db 92 #:use-module (gnu packages perl)
5ccde207 93 #:use-module (gnu packages perl-check)
cabe8f18 94 #:use-module (gnu packages perl-web)
4c6aa73b 95 #:use-module (gnu packages pkg-config)
d3c6ad0a 96 #:use-module (gnu packages popt)
06a035db 97 #:use-module (gnu packages python)
9763102b 98 #:use-module (gnu packages python-crypto)
450d5dc2 99 #:use-module (gnu packages python-web)
312ec128 100 #:use-module (gnu packages python-science)
44d10b1f 101 #:use-module (gnu packages python-xyz)
4c6aa73b 102 #:use-module (gnu packages rdf)
06a035db 103 #:use-module (gnu packages readline)
afcbb020 104 #:use-module (gnu packages ruby)
6bbbca90 105 #:use-module (gnu packages serialization)
9d0c291e 106 #:use-module (gnu packages sphinx)
cd0322a3 107 #:use-module (gnu packages sqlite)
06a035db 108 #:use-module (gnu packages tcl)
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109 #:use-module (gnu packages terminals)
110 #:use-module (gnu packages textutils)
06a035db 111 #:use-module (gnu packages tls)
6bbbca90 112 #:use-module (gnu packages valgrind)
dae7661a 113 #:use-module (gnu packages web)
77631745 114 #:use-module (gnu packages xml)
0e1b262e 115 #:use-module ((guix licenses) #:prefix license:)
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116 #:use-module (guix packages)
117 #:use-module (guix download)
da602679 118 #:use-module (guix bzr-download)
16973071 119 #:use-module (guix git-download)
9df78675 120 #:use-module (guix build-system emacs)
5f96f303 121 #:use-module (guix build-system gnu)
58071723 122 #:use-module (guix build-system go)
274da61d 123 #:use-module (guix build-system perl)
4d98bfaf 124 #:use-module (guix build-system python)
afcbb020 125 #:use-module (guix build-system ruby)
77631745 126 #:use-module (guix build-system cmake)
6e385b76 127 #:use-module (guix build-system scons)
51b0f09e 128 #:use-module ((guix build utils) #:hide (which))
329d13b8 129 #:use-module (guix utils)
29cfbfca 130 #:use-module (srfi srfi-1)
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131 #:use-module (srfi srfi-26)
132 #:use-module (ice-9 match))
133
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134(define-public 4store
135 (package
136 (name "4store")
137 (version "1.1.6")
138 (source (origin
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139 (method git-fetch)
140 (uri (git-reference
141 (url "https://github.com/4store/4store.git")
142 (commit (string-append "v" version))))
143 (file-name (git-file-name name version))
4c6aa73b 144 (sha256
50e20b8f 145 (base32 "1kzdfmwpzy64cgqlkcz5v4klwx99w0jk7afckyf7yqbqb4rydmpk"))
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146 (patches (search-patches "4store-unset-preprocessor-directive.patch"
147 "4store-fix-buildsystem.patch"))))
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148 (build-system gnu-build-system)
149 (native-inputs
150 `(("perl" ,perl)
151 ("python" ,python-2)
152 ("autoconf" ,autoconf)
153 ("automake" ,automake)
b94a6ca0 154 ("gettext" ,gettext-minimal)
4c6aa73b 155 ("libtool" ,libtool)
74c8b174 156 ("pcre" ,pcre "bin") ;for 'pcre-config'
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157 ("pkg-config" ,pkg-config)))
158 (inputs
159 `(("glib" ,glib)
160 ("rasqal" ,rasqal)
161 ("libxml2" ,libxml2)
162 ("raptor2" ,raptor2)
163 ("readline" ,readline)
164 ("avahi" ,avahi)
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165 ("cyrus-sasl" ,cyrus-sasl)
166 ("openssl" ,openssl)
167 ("util-linux" ,util-linux)))
4c6aa73b 168 ;; http://www.4store.org has been down for a while now.
bbf9092b 169 (home-page "https://github.com/4store/4store")
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170 (synopsis "Clustered RDF storage and query engine")
171 (description "4store is a RDF/SPARQL store written in C, supporting
172either single machines or networked clusters.")
ba8b9f8d 173 (license license:gpl3+)))
4c6aa73b 174
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175(define-public go-gopkg.in-mgo.v2
176 (package
177 (name "go-gopkg.in-mgo.v2")
178 (version "2016.08.01")
179 (source (origin
180 (method git-fetch)
181 (uri (git-reference
182 (url "https://github.com/go-mgo/mgo")
183 (commit (string-append "r" version))))
184 (file-name (git-file-name name version))
185 (sha256
186 (base32
187 "0rwbi1z63w43b0z9srm8m7iz1fdwx7bq7n2mz862d6liiaqa59jd"))))
188 (build-system go-build-system)
189 (arguments
190 `(#:import-path "gopkg.in/mgo.v2"
191 ;; TODO: The tests fail as MongoDB fails to start
192 ;; Error parsing command line: unrecognised option '--chunkSize'
193 #:tests? #f
194 #:phases
195 (modify-phases %standard-phases
196 (delete 'reset-gzip-timestamps)
197 (add-before 'check 'start-mongodb
198 (lambda* (#:key tests? #:allow-other-keys)
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199 (when tests?
200 (with-directory-excursion "src/gopkg.in/mgo.v2"
201 (invoke "make" "startdb")))
202 #t))
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203 (add-after 'check 'stop'mongodb
204 (lambda* (#:key tests? #:allow-other-keys)
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205 (when tests?
206 (with-directory-excursion "src/gopkg.in/mgo.v2"
207 (invoke "make" "stopdb")))
208 #t)))))
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209 (native-inputs
210 `(("go-gopkg.in-check.v1" ,go-gopkg.in-check.v1)
211 ("mongodb" ,mongodb)
212 ("daemontools" ,daemontools)))
213 (synopsis "@code{mgo} offers a rich MongoDB driver for Go.")
214 (description
215 "@code{mgo} (pronounced as mango) is a MongoDB driver for the Go language.
216It implements a rich selection of features under a simple API following
217standard Go idioms.")
218 (home-page "http://labix.org/mgo")
219 (license license:bsd-2)))
220
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221(define-public ephemeralpg
222 (package
223 (name "ephemeralpg")
224 (version "2.8")
225 (source
226 (origin
227 (method url-fetch)
228 (uri (string-append
229 "http://eradman.com/ephemeralpg/code/ephemeralpg-"
230 version ".tar.gz"))
231 (sha256
232 (base32 "1dpfxsd8a52psx3zlfbqkw53m35w28qwyb87a8anz143x6gnkkr4"))))
233 (build-system gnu-build-system)
234 (arguments
235 '(#:make-flags (list "CC=gcc"
236 (string-append "PREFIX=" %output))
237 #:phases
238 (modify-phases %standard-phases
239 (delete 'configure)
240 (replace 'check
241 (lambda* (#:key inputs #:allow-other-keys)
242 ;; The intention for one test is to test without PostgreSQL on
243 ;; the $PATH, so replace the test $PATH with just the util-linux
244 ;; bin, which contains getopt. It will hopefully be possible to
245 ;; remove this for releases after 2.8.
246 (substitute* "test.rb"
247 (("/bin:/usr/bin")
248 (string-append (assoc-ref inputs "util-linux")
249 "/bin")))
250 ;; Set the LC_ALL=C as some tests use sort, and the locale
251 ;; affects the order. It will hopefully be possible to remove
252 ;; this for releases after 2.8.
253 (setenv "LC_ALL" "C")
254 (invoke "ruby" "test.rb")
255 #t))
256 (add-after 'install 'wrap
257 (lambda* (#:key inputs outputs #:allow-other-keys)
258 (let ((out (assoc-ref outputs "out")))
259 (wrap-program (string-append out "/bin/pg_tmp")
260 `("PATH" ":" prefix
261 (,(string-append (assoc-ref inputs "util-linux")
262 "/bin")
263 ,(string-append (assoc-ref inputs "postgresql")
264 "/bin")
265 ;; For getsocket
266 ,(string-append out "/bin")))))
267 #t)))))
268 (inputs
269 `(("postgresql" ,postgresql)
270 ("util-linux" ,util-linux)))
271 (native-inputs
272 `(("ruby" ,ruby)))
273 (home-page "http://eradman.com/ephemeralpg/")
274 (synopsis "Run temporary PostgreSQL databases")
275 (description
276 "@code{pg_tmp} creates temporary PostgreSQL databases, suitable for tasks
277like running software test suites. Temporary databases created with
278@code{pg_tmp} have a limited shared memory footprint and are automatically
279garbage-collected after a configurable number of seconds (the default is
28060).")
281 (license license:isc)))
282
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283(define-public es-dump-restore
284 (package
285 (name "es-dump-restore")
286 (version "2.1.0")
287 (source
288 (origin
289 (method url-fetch)
290 (uri (rubygems-uri "es_dump_restore" version))
291 (sha256
292 (base32
293 "020yk7f1hw48clmf5501z3xv9shsdchyymcv0y2cci2c1xvr1mim"))))
294 (build-system ruby-build-system)
295 (arguments
0076f5a9 296 '(#:tests? #f)) ;; No testsuite.
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297 (propagated-inputs
298 `(("ruby-httpclient" ,ruby-httpclient)
299 ("ruby-multi-json" ,ruby-multi-json)
300 ("ruby-progress_bar" ,ruby-progress_bar)
301 ("ruby-rubyzip" ,ruby-rubyzip)
302 ("ruby-thor" ,ruby-thor)))
303 (synopsis "Utility for dumping and restoring ElasticSearch indexes")
304 (description
305 "This package provides a utility for dumping the contents of an
306ElasticSearch index to a compressed file and restoring the dumpfile back to an
307ElasticSearch server")
308 (home-page "https://github.com/patientslikeme/es_dump_restore")
309 (license license:expat)))
310
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311(define-public leveldb
312 (package
313 (name "leveldb")
3a32be71 314 (version "1.22")
b9f771a7 315 (source (origin
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316 (method git-fetch)
317 (uri (git-reference
318 (url "https://github.com/google/leveldb")
5cc013f0 319 (commit version)))
ad7c77fd 320 (file-name (git-file-name name version))
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321 (sha256
322 (base32
3a32be71 323 "0qrnhiyq7r4wa1a4wi82zgns35smj94mcjsc7kfs1k6ia9ys79z7"))))
5cc013f0 324 (build-system cmake-build-system)
b9f771a7 325 (arguments
5cc013f0 326 `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON" "-DLEVELDB_BUILD_TESTS=ON")))
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327 (inputs
328 `(("snappy" ,snappy)))
fd423e4d 329 (home-page "https://github.com/google/leveldb")
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330 (synopsis "Fast key-value storage library")
331 (description
332 "LevelDB is a fast key-value storage library that provides an ordered
333mapping from string keys to string values.")
ba8b9f8d 334 (license license:bsd-3)))
b9f771a7 335
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336(define-public memcached
337 (package
338 (name "memcached")
591464e3 339 (version "1.5.16")
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340 (source
341 (origin
342 (method url-fetch)
343 (uri (string-append
344 "https://memcached.org/files/memcached-" version ".tar.gz"))
345 (sha256
591464e3 346 (base32 "0nnccb697jhdn5gqrh3phibzs6xr4nf4ryv7nmyv5vf11n4jr8j5"))))
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347 (build-system gnu-build-system)
348 (inputs
349 `(("libevent" ,libevent)
350 ("cyrus-sasl" ,cyrus-sasl)))
351 (home-page "https://memcached.org/")
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352 (synopsis "In-memory caching service")
353 (description "Memcached is an in-memory key-value store. It has a small
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354and generic API, and was originally intended for use with dynamic web
355applications.")
356 (license license:bsd-3)))
357
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358(define-public libmemcached
359 (package
360 (name "libmemcached")
361 (version "1.0.18")
362 ;; We build from the sources since we want to build the extra HTML
363 ;; documentation which is not included with the release.
364 (source (origin
365 (method bzr-fetch)
366 (uri (bzr-reference
367 (url "lp:libmemcached/1.0")
368 (revision (string-append "tag:" version))))
369 (file-name (string-append name "-" version "-checkout"))
370 (sha256
371 (base32
372 "1842s4dxdh21gdr46q4dgxigidcs6dkqnbnqjwb9l8r0bqx5nb10"))))
373 (build-system gnu-build-system)
374 (native-inputs
375 `(("memcached" ,memcached)
376 ("libtool" ,libtool)
377 ("autoconf" ,autoconf)
378 ("automake" ,automake)
379 ("bison" ,bison)
380 ("flex" ,flex)
381 ("perl" ,perl)
382 ("python-sphinx" ,python-sphinx))) ;to build the HTML doc.
383 (inputs
384 `(("libevent" ,libevent)
385 ("cyrus-sasl" ,cyrus-sasl)))
386 (outputs '("out" "doc"))
387 (arguments
388 '(#:phases
389 (modify-phases %standard-phases
390 (add-before 'bootstrap 'fix-configure.ac
391 ;; Move the AC_CONFIG_AUX_DIR macro use under AC_INIT, otherwise we
392 ;; get the error ``configure: error: cannot find install-sh,
393 ;; install.sh, or shtool in "." "./.." "./../.."`` (see:
394 ;; https://debbugs.gnu.org/cgi/bugreport.cgi?bug=19539 and
395 ;; https://bugs.launchpad.net/libmemcached/+bug/1803922).
396 (lambda _
397 (delete-file "bootstrap.sh") ;not useful in the context of Guix
398 (substitute* "configure.ac"
399 (("^AC_CONFIG_AUX_DIR\\(\\[build-aux\\]\\).*") "")
400 (("(^AC_INIT.*)" anchor)
401 (string-append anchor "AC_CONFIG_AUX_DIR([build-aux])\n")))
402 #t))
403 (add-before 'bootstrap 'disable-failing-tests
404 ;; See: https://bugs.launchpad.net/libmemcached/+bug/1803926
405 (lambda _
406 ;; Mark some heavily failing test suites as expected to fail.
407 (substitute* "Makefile.am"
408 (("(XFAIL_TESTS =[^\n]*)" xfail_tests)
409 (string-append xfail_tests " tests/testudp"
410 " tests/libmemcached-1.0/testapp"
411 " tests/libmemcached-1.0/testsocket")))
412 ;; Disable two tests of the unittest test suite.
413 (substitute* "libtest/unittest.cc"
414 ((".*echo_fubar_BINARY \\},.*") "")
415 ((".*application_doesnotexist_BINARY \\},.*") ""))
416 #t))
417 (add-after 'disable-dns-tests 'build-and-install-html-doc
418 (lambda* (#:key outputs #:allow-other-keys)
419 (let ((html (string-append (assoc-ref outputs "doc")
420 "/share/doc/libmemcached/html/")))
421 (invoke "make" "install-html")
422 ;; Cleanup useless files.
423 (for-each delete-file-recursively
424 (map (lambda (x) (string-append html x))
425 '("_sources" ".doctrees" ".buildinfo"))))
426 #t)))))
427 (home-page "https://libmemcached.org/")
428 (synopsis "C++ library for memcached")
429 (description "libMemcached is a library to use memcached in C/C++
430applications. It comes with a complete reference guide and documentation of
431the API, and provides features such as:
432@itemize
433@item Asynchronous and synchronous transport support
434@item Consistent hashing and distribution
435@item Tunable hashing algorithm to match keys
436@item Access to large object support
437@item Local replication
438@end itemize")
439 (license license:bsd-3)))
440
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441(define-public python-pylibmc
442 (package
443 (name "python-pylibmc")
79bc9176 444 (version "1.6.1")
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445 (source
446 (origin
447 (method url-fetch)
448 (uri (pypi-uri "pylibmc" version))
449 (sha256
79bc9176 450 (base32 "1sg7d9j0v6g3xg3finf4l1hb72c13vcyyi6rqrc9shbx903d93ca"))))
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451 (build-system python-build-system)
452 (arguments
453 '(#:phases
454 (modify-phases %standard-phases
455 (add-before 'check 'start-memcached-daemon
456 ;; The test suite requires a memcached server.
457 (lambda _
458 (invoke "memcached" "-d"))))))
459 (native-inputs
460 `(("memcached" ,memcached)
461 ("python-nose" ,python-nose)))
462 (inputs
463 `(("libmemcached" ,libmemcached)
464 ("zlib" ,zlib)
465 ("cyrus-sasl" ,cyrus-sasl)))
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466 (home-page "http://sendapatch.se/projects/pylibmc/")
467 (synopsis "Python client for memcached")
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468 (description
469 "@code{pylibmc} is a client in Python for memcached. It is a wrapper
470around TangentOrg’s libmemcached library, and can be used as a drop-in
471replacement for the code@{python-memcached} library.")
472 (license license:bsd-3)))
473
474(define-public python2-pylibmc
475 (package-with-python2 python-pylibmc))
476
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477(define-public mongodb
478 (package
479 (name "mongodb")
f1c49e75 480 (version "3.4.10")
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481 (source (origin
482 (method url-fetch)
483 (uri (string-append "https://github.com/mongodb/mongo/archive/r"
484 version ".tar.gz"))
485 (file-name (string-append name "-" version ".tar.gz"))
486 (sha256
f1c49e75 487 (base32 "0676lvkljj7a5hdhv78dbykqnqrj9lbn9799mi84b8vbnzsq961r"))
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488 (modules '((guix build utils)))
489 (snippet
490 '(begin
491 (for-each (lambda (dir)
492 (delete-file-recursively
493 (string-append "src/third_party/" dir)))
494 '("pcre-8.41" "scons-2.5.0" "snappy-1.1.3"
495 "valgrind-3.11.0" "wiredtiger"
6cbee49d
MW
496 "yaml-cpp-0.5.3" "zlib-1.2.8"))
497 #t))
6bbbca90
CB
498 (patches
499 (list
500 (search-patch "mongodb-support-unknown-linux-distributions.patch")))))
6e385b76 501 (build-system scons-build-system)
6bbbca90 502 (inputs
9d67480a 503 `(("openssl" ,openssl-1.0)
6bbbca90 504 ("pcre" ,pcre)
319b52c3
EF
505 ,@(match (%current-system)
506 ((or "x86_64-linux" "aarch64-linux" "mips64el-linux")
507 `(("wiredtiger" ,wiredtiger)))
508 (_ `()))
6bbbca90
CB
509 ("yaml-cpp" ,yaml-cpp)
510 ("zlib" ,zlib)
51b0f09e 511 ("snappy" ,snappy)))
6bbbca90 512 (native-inputs
6e385b76 513 `(("valgrind" ,valgrind)
90205b62 514 ("perl" ,perl)
61506fe5 515 ("python" ,python-2)
90205b62
CB
516 ("python2-pymongo" ,python2-pymongo)
517 ("python2-pyyaml" ,python2-pyyaml)
518 ("tzdata" ,tzdata)))
6bbbca90 519 (arguments
6e385b76
AI
520 `(#:scons ,scons-python2
521 #:phases
6bbbca90
CB
522 (let ((common-options
523 `(;; "--use-system-tcmalloc" TODO: Missing gperftools
524 "--use-system-pcre"
29cfbfca
EF
525 ;; wiredtiger is 64-bit only
526 ,,(if (any (cute string-prefix? <> (or (%current-target-system)
527 (%current-system)))
528 '("i686-linux" "armhf-linux"))
529 ``"--wiredtiger=off"
319b52c3 530 ``"--use-system-wiredtiger")
6bbbca90
CB
531 ;; TODO
532 ;; build/opt/mongo/db/fts/unicode/string.o failed: Error 1
533 ;; --use-system-boost
534 "--use-system-snappy"
535 "--use-system-zlib"
536 "--use-system-valgrind"
537 ;; "--use-system-stemmer" TODO: Missing relevant package
538 "--use-system-yaml"
539 "--disable-warnings-as-errors"
540 ,(format #f "--jobs=~a" (parallel-job-count))
541 "--ssl")))
542 (modify-phases %standard-phases
9d67480a
CB
543 (add-after 'unpack 'patch
544 (lambda _
545 ;; Remove use of GNU extensions in parse_number_test.cpp, to
546 ;; allow compiling with GCC 7 or later
547 ;; https://jira.mongodb.org/browse/SERVER-28063
548 (substitute* "src/mongo/base/parse_number_test.cpp"
549 (("0xabcab\\.defdefP-10")
550 "687.16784283419838"))
551 #t))
6bbbca90
CB
552 (add-after 'unpack 'scons-propagate-environment
553 (lambda _
554 ;; Modify the SConstruct file to arrange for
555 ;; environment variables to be propagated.
556 (substitute* "SConstruct"
557 (("^env = Environment\\(")
558 "env = Environment(ENV=os.environ, "))
559 #t))
560 (add-after 'unpack 'create-version-file
561 (lambda _
562 (call-with-output-file "version.json"
563 (lambda (port)
564 (display ,(simple-format #f "{
565 \"version\": \"~A\"
566}" version) port)))
567 #t))
568 (replace 'build
569 (lambda _
d9bcdfce 570 (apply invoke `("scons"
6bbbca90 571 ,@common-options
d9bcdfce 572 "mongod" "mongo" "mongos"))))
6bbbca90 573 (replace 'check
90205b62
CB
574 (lambda* (#:key tests? inputs #:allow-other-keys)
575 (setenv "TZDIR"
576 (string-append (assoc-ref inputs "tzdata")
577 "/share/zoneinfo"))
96272e28
MW
578 (when tests?
579 ;; Note that with the tests, especially the unittests, the
580 ;; build can take up to ~45GB of space, as many tests are
581 ;; individual executable files, with some being hundreds of
582 ;; megabytes in size.
583 (apply invoke `("scons" ,@common-options "dbtest" "unittests"))
584 (substitute* "build/unittests.txt"
585 ;; TODO: Don't run the async_stream_test, as it hangs
586 (("^build\\/opt\\/mongo\\/executor\\/async\\_stream\\_test\n$")
587 "")
588 ;; TODO: This test fails
589 ;; Expected 0UL != disks.size() (0 != 0) @src/mongo/util/procparser_test.cpp:476
590 (("^build\\/opt\\/mongo\\/util\\/procparser\\_test\n$")
591 ""))
592 (invoke "python" "buildscripts/resmoke.py"
593 "--suites=dbtest,unittests"
594 (format #f "--jobs=~a" (parallel-job-count))))
595 #t))
6bbbca90 596 (replace 'install
96272e28
MW
597 (lambda* (#:key outputs #:allow-other-keys)
598 (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
6bbbca90
CB
599 (install-file "mongod" bin)
600 (install-file "mongos" bin)
601 (install-file "mongo" bin))
602 #t))))))
603 (home-page "https://www.mongodb.org/")
604 (synopsis "High performance and high availability document database")
605 (description
606 "Mongo is a high-performance, high availability, schema-free
607document-oriented database. A key goal of MongoDB is to bridge the gap
608between key/value stores (which are fast and highly scalable) and traditional
609RDBMS systems (which are deep in functionality).")
610 (license (list license:agpl3
611 ;; Some parts are licensed under the Apache License
612 license:asl2.0))))
613
7cbf06d8
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614;; XXX When updating, check whether boost-for-mysql is still needed.
615;; It might suffice to patch ‘cmake/boost.cmake’ as done in the past.
5f96f303
LC
616(define-public mysql
617 (package
618 (name "mysql")
aace6f6d 619 (version "5.7.27")
5f96f303
LC
620 (source (origin
621 (method url-fetch)
23bbd7dd 622 (uri (list (string-append
7fe3a57a 623 "https://dev.mysql.com/get/Downloads/MySQL-"
23bbd7dd
EF
624 (version-major+minor version) "/"
625 name "-" version ".tar.gz")
626 (string-append
7fe3a57a 627 "https://downloads.mysql.com/archives/get/file/"
23bbd7dd 628 name "-" version ".tar.gz")))
5f96f303
LC
629 (sha256
630 (base32
aace6f6d 631 "1fhv16zr46pxm1j8vb8x8mh3nwzglg01arz8gnazbmjqldr5idpq"))))
329d13b8
SB
632 (build-system cmake-build-system)
633 (arguments
69419655 634 `(#:configure-flags
329d13b8
SB
635 '("-DBUILD_CONFIG=mysql_release"
636 "-DWITH_SSL=system"
637 "-DWITH_ZLIB=system"
638 "-DDEFAULT_CHARSET=utf8"
639 "-DDEFAULT_COLLATION=utf8_general_ci"
640 "-DMYSQL_DATADIR=/var/lib/mysql"
641 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
642 "-DINSTALL_INFODIR=share/mysql/docs"
643 "-DINSTALL_MANDIR=share/man"
644 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
645 "-DINSTALL_SCRIPTDIR=bin"
646 "-DINSTALL_INCLUDEDIR=include/mysql"
647 "-DINSTALL_DOCREADMEDIR=share/mysql/docs"
648 "-DINSTALL_SUPPORTFILESDIR=share/mysql"
649 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
650 "-DINSTALL_DOCDIR=share/mysql/docs"
651 "-DINSTALL_SHAREDIR=share/mysql"
652 ;; Get rid of test data.
653 "-DINSTALL_MYSQLTESTDIR="
3f289db6
LC
654 "-DINSTALL_SQLBENCHDIR=")
655 #:phases (modify-phases %standard-phases
6a52df50
LC
656 (add-after
657 'install 'remove-extra-binaries
658 (lambda* (#:key outputs #:allow-other-keys)
659 (let ((out (assoc-ref outputs "out")))
660 ;; Remove the 3 *_embedded files, which weigh in at
661 ;; 14 MiB each.
662 (for-each delete-file
663 (find-files (string-append out "/bin")
664 "_embedded$"))
7d099cbe 665 #t))))))
329d13b8
SB
666 (native-inputs
667 `(("bison" ,bison)
aace6f6d
EF
668 ("perl" ,perl)
669 ("pkg-config" ,pkg-config)))
5f96f303 670 (inputs
7cbf06d8 671 `(("boost" ,boost-for-mysql)
23bbd7dd 672 ("libaio" ,libaio)
aace6f6d 673 ("libtirpc" ,libtirpc)
23bbd7dd 674 ("ncurses" ,ncurses)
5f96f303 675 ("openssl" ,openssl)
aace6f6d 676 ("rpcsvc-proto" ,rpcsvc-proto) ; rpcgen
23bbd7dd 677 ("zlib" ,zlib)))
7fe3a57a 678 (home-page "https://www.mysql.com/")
9e771e3b 679 (synopsis "Fast, easy to use, and popular database")
5f96f303
LC
680 (description
681 "MySQL is a fast, reliable, and easy to use relational database
682management system that supports the standardized Structured Query
683Language.")
ba8b9f8d 684 (license license:gpl2)))
5f96f303 685
77631745
SB
686(define-public mariadb
687 (package
688 (name "mariadb")
cc3c5fc5 689 (version "10.1.41")
77631745
SB
690 (source (origin
691 (method url-fetch)
cc3c5fc5
MB
692 (uri (string-append "https://downloads.mariadb.com/MariaDB"
693 "/mariadb-" version "/source/mariadb-"
694 version ".tar.gz"))
77631745
SB
695 (sha256
696 (base32
cc3c5fc5 697 "1wh0073lqw3d9xs150bf2q3qvjwa6886mfi9khmsn7p8vapw6irb"))
fb76ef84 698 (patches (search-patches "mariadb-client-test-32bit.patch"))
2001d2da
MB
699 (modules '((guix build utils)))
700 (snippet
701 '(begin
702 ;; Delete bundled snappy and xz.
703 (delete-file-recursively "storage/tokudb/PerconaFT/third_party")
4333d48a
MB
704 (substitute* "storage/tokudb/PerconaFT/CMakeLists.txt"
705 ;; This file checks that the bundled sources are present and
706 ;; declares build procedures for them.
707 (("^include\\(TokuThirdParty\\)") ""))
708 (substitute* "storage/tokudb/PerconaFT/ft/CMakeLists.txt"
709 ;; Don't attempt to use the procedures we just removed.
710 ((" build_lzma build_snappy") ""))
2001d2da
MB
711
712 ;; Preserve CMakeLists.txt for these.
713 (for-each (lambda (file)
714 (unless (string-suffix? "CMakeLists.txt" file)
715 (delete-file file)))
716 (append (find-files "extra/yassl")
717 (find-files "pcre") (find-files "zlib")))
718 #t))))
77631745 719 (build-system cmake-build-system)
2b8491fb 720 (outputs '("out" "lib" "dev"))
77631745 721 (arguments
5193ae64 722 `(#:configure-flags
2b8491fb
JL
723 (list
724 "-DBUILD_CONFIG=mysql_release"
6cf8e576
LF
725 ;; Linking with libarchive fails, like this:
726
727 ;; ld: /gnu/store/...-libarchive-3.2.2/lib/libarchive.a(archive_entry.o):
728 ;; relocation R_X86_64_32 against `.bss' can not be used when
729 ;; making a shared object; recompile with -fPIC
730
731 ;; For now, disable the features that that use libarchive (xtrabackup).
732 "-DWITH_LIBARCHIVE=OFF"
733
bba7a77e
MB
734 ;; Disable the TokuDB engine, because its test suite frequently fails,
735 ;; and loading it crashes the server: <https://bugs.gnu.org/35521>.
736 "-DTOKUDB_OK=OFF"
737
2001d2da
MB
738 ;; Ensure the system libraries are used.
739 "-DWITH_JEMALLOC=yes"
740 "-DWITH_PCRE=system"
741 "-DWITH_SSL=system"
742 "-DWITH_ZLIB=system"
743
77631745
SB
744 "-DDEFAULT_CHARSET=utf8"
745 "-DDEFAULT_COLLATION=utf8_general_ci"
746 "-DMYSQL_DATADIR=/var/lib/mysql"
747 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
2b8491fb
JL
748 (string-append "-DCMAKE_INSTALL_PREFIX=" (assoc-ref %outputs "lib"))
749 (string-append "-DCMAKE_INSTALL_RPATH=" (assoc-ref %outputs "lib")
750 "/lib")
751 (string-append "-DINSTALL_INFODIR=" (assoc-ref %outputs "out")
752 "/share/mysql/docs")
753 (string-append "-DINSTALL_MANDIR=" (assoc-ref %outputs "out")
754 "/share/man")
755 (string-append "-DINSTALL_SCRIPTDIR=" (assoc-ref %outputs "out") "/bin")
756 (string-append "-DINSTALL_BINDIR=" (assoc-ref %outputs "out") "/bin")
757 "-DCMAKE_INSTALL_LIBDIR=lib"
77631745 758 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
2b8491fb
JL
759 (string-append "-DINSTALL_INCLUDEDIR=" (assoc-ref %outputs "dev")
760 "/include/mysql")
761 (string-append "-DINSTALL_DOCREADMEDIR=" (assoc-ref %outputs "out")
762 "/share/mysql/docs")
763 (string-append "-DINSTALL_DOCDIR=" (assoc-ref %outputs "out")
764 "/share/mysql/docs")
765 (string-append "-DINSTALL_SUPPORTFILESDIR=" (assoc-ref %outputs "out")
766 "/share/mysql/support-files")
77631745 767 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
4c27ea06 768 "-DINSTALL_SHAREDIR=share")
77631745
SB
769 #:phases
770 (modify-phases %standard-phases
4333d48a 771 (add-after 'unpack 'fix-pcre-detection
2001d2da
MB
772 (lambda _
773 ;; The bundled PCRE in MariaDB has a patch that was upstreamed
774 ;; in version 8.34. Unfortunately the upstream patch behaves
775 ;; slightly differently and the build system fails to detect it.
776 ;; See <https://bugs.exim.org/show_bug.cgi?id=2173>.
777 ;; XXX: Consider patching PCRE instead.
778 (substitute* "cmake/pcre.cmake"
779 ((" OR NOT PCRE_STACK_SIZE_OK") ""))
2001d2da 780 #t))
3869f39e
MB
781 (add-after 'unpack 'adjust-tests
782 (lambda _
783 (let ((disabled-tests
784 '(;; These fail because root@hostname == root@localhost in
785 ;; the build environment, causing a user count mismatch.
786 ;; See <https://jira.mariadb.org/browse/MDEV-7761>.
787 "main.join_cache"
788 "main.explain_non_select"
1d957c79 789 "main.stat_tables_innodb"
3418e43b 790 "roles.acl_statistics"
69fb26d4
MB
791
792 ;; This file contains a time bomb which makes it fail after
0ce64334 793 ;; 2030-12-31. See <https://bugs.gnu.org/34351> for details.
38f77be4 794 "main.mysqldump"
69fb26d4 795
3418e43b
MB
796 ;; FIXME: This test fails on i686:
797 ;; -myisampack: Can't create/write to file (Errcode: 17 "File exists")
798 ;; +myisampack: Can't create/write to file (Errcode: 17 "File exists)
799 ;; When running "myisampack --join=foo/t3 foo/t1 foo/t2"
800 ;; (all three tables must exist and be identical)
801 ;; in a loop it produces the same error around 1/240 times.
802 ;; montywi on #maria suggested removing the real_end check in
803 ;; "strings/my_vsnprintf.c" on line 503, yet it still does not
804 ;; reach the ending quote occasionally. Disable it for now.
62694caa
EF
805 "main.myisampack"
806 ;; FIXME: This test fails on armhf-linux:
807 "mroonga/storage.index_read_multiple_double"))
3869f39e
MB
808
809 ;; This file contains a list of known-flaky tests for this
810 ;; release. Append our own items.
811 (unstable-tests (open-file "mysql-test/unstable-tests" "a")))
812 (for-each (lambda (test)
813 (format unstable-tests "~a : ~a\n"
814 test "Disabled in Guix"))
815 disabled-tests)
816 (close-port unstable-tests)
817
818 (substitute* "mysql-test/mysql-test-run.pl"
819 (("/bin/ls") (which "ls"))
820 (("/bin/sh") (which "sh")))
821 #t)))
5b4d2e40
MB
822 (add-before 'configure 'disable-plugins
823 (lambda _
824 (let ((disable-plugin (lambda (name)
825 (call-with-output-file
826 (string-append "plugin/" name
827 "/CMakeLists.txt")
828 (lambda (port)
829 (format port "\n")))))
03335824 830 (disabled-plugins '(;; XXX: Causes a test failure.
3869f39e 831 "disks")))
5b4d2e40
MB
832 (for-each disable-plugin disabled-plugins)
833 #t)))
3869f39e
MB
834 (replace 'check
835 (lambda* (#:key (tests? #t) #:allow-other-keys)
836 (if tests?
837 (with-directory-excursion "mysql-test"
838 (invoke "./mtr" "--verbose"
3418e43b 839 "--retry=3"
71179b35
MB
840 "--testcase-timeout=40"
841 "--suite-timeout=600"
3869f39e
MB
842 "--parallel" (number->string (parallel-job-count))
843 "--skip-test-list=unstable-tests"))
844 (format #t "test suite not run~%"))
845 #t))
77631745
SB
846 (add-after
847 'install 'post-install
848 (lambda* (#:key outputs #:allow-other-keys)
849 (let* ((out (assoc-ref outputs "out"))
2b8491fb
JL
850 (dev (assoc-ref outputs "dev"))
851 (lib (assoc-ref outputs "lib")))
77631745
SB
852 (substitute* (string-append out "/bin/mysql_install_db")
853 (("basedir=\"\"")
854 (string-append "basedir=\"" out "\"")))
855 ;; Remove unneeded files for testing.
2b8491fb 856 (with-directory-excursion lib
77631745 857 (for-each delete-file-recursively
2b8491fb 858 '("data" "mysql-test" "sql-bench"))
963157f1
MB
859 ;; And static libraries.
860 (for-each delete-file (find-files "lib" "\\.a$")))
2b8491fb
JL
861 (with-directory-excursion out
862 (delete-file "share/man/man1/mysql-test-run.pl.1")
863 ;; Delete huge and unnecessary executables.
864 (for-each delete-file (find-files "bin" "(test|embedded)")))
865 (mkdir-p (string-append dev "/share"))
866 (mkdir-p (string-append dev "/bin"))
867 (rename-file (string-append lib "/bin/mysqld")
868 (string-append out "/bin/mysqld"))
869 (rename-file (string-append lib "/share/pkgconfig")
870 (string-append dev "/share/pkgconfig"))
871 (rename-file (string-append out "/bin/mysql_config")
872 (string-append dev "/bin/mysql_config"))
841ee2a8 873 #t))))))
77631745
SB
874 (native-inputs
875 `(("bison" ,bison)
2fa55c72
MB
876 ;; XXX: On armhf, use GCC 5 to work around <https://bugs.gnu.org/37605>.
877 ,@(if (string-prefix? "armhf" (%current-system))
878 `(("gcc", gcc-5))
879 '())
03335824 880 ("perl" ,perl)))
77631745
SB
881 (inputs
882 `(("jemalloc" ,jemalloc)
883 ("libaio" ,libaio)
884 ("libxml2" ,libxml2)
885 ("ncurses" ,ncurses)
77631745 886 ("pcre" ,pcre)
2001d2da 887 ("xz" ,xz)
77631745 888 ("zlib" ,zlib)))
22f5c076
MB
889 (propagated-inputs
890 ;; mariadb.pc says -lssl -lcrypto, so propagate it.
e74f153a 891 `(("openssl" ,openssl-1.0)))
3869f39e
MB
892 ;; The test suite is very resource intensive and can take more than three
893 ;; hours on a x86_64 system. Give slow and busy machines some leeway.
894 (properties '((timeout . 64800))) ;18 hours
77631745
SB
895 (home-page "https://mariadb.org/")
896 (synopsis "SQL database server")
897 (description
898 "MariaDB is a multi-user and multi-threaded SQL database server, designed
899as a drop-in replacement of MySQL.")
ba8b9f8d 900 (license license:gpl2)))
77631745 901
97dd1b15 902;; Don't forget to update the other postgresql packages when upgrading this one.
5f96f303
LC
903(define-public postgresql
904 (package
905 (name "postgresql")
c8f5827a 906 (version "10.10")
5f96f303
LC
907 (source (origin
908 (method url-fetch)
dbeaf8f2 909 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
9020890b 910 version "/postgresql-" version ".tar.bz2"))
5f96f303
LC
911 (sha256
912 (base32
c8f5827a 913 "0lzj46dwd9cw94gnqm36bxd7jlhfdyqjrfzr3c4xd3prfn2rnkxd"))
c336567d 914 (patches (search-patches "postgresql-disable-resolve_symlinks.patch"))))
5f96f303 915 (build-system gnu-build-system)
dd213082 916 (arguments
8b7e6d00 917 `(#:configure-flags '("--with-uuid=e2fs" "--with-openssl")
b7aa3f5d 918 #:phases
dd213082
JD
919 (modify-phases %standard-phases
920 (add-before 'configure 'patch-/bin/sh
921 (lambda _
922 ;; Refer to the actual shell.
923 (substitute* '("src/bin/pg_ctl/pg_ctl.c"
924 "src/bin/psql/command.c")
925 (("/bin/sh") (which "sh")))
b7aa3f5d
DM
926 #t))
927 (add-after 'build 'build-contrib
928 (lambda _
1fbad3ad 929 (invoke "make" "-C" "contrib")))
b7aa3f5d
DM
930 (add-after 'install 'install-contrib
931 (lambda _
1fbad3ad 932 (invoke "make" "-C" "contrib" "install"))))))
5f96f303
LC
933 (inputs
934 `(("readline" ,readline)
b7aa3f5d 935 ("libuuid" ,util-linux)
8b7e6d00 936 ("openssl" ,openssl)
5f96f303 937 ("zlib" ,zlib)))
d887f420 938 (home-page "https://www.postgresql.org/")
5f96f303
LC
939 (synopsis "Powerful object-relational database system")
940 (description
941 "PostgreSQL is a powerful object-relational database system. It is fully
942ACID compliant, has full support for foreign keys, joins, views, triggers, and
943stored procedures (in multiple languages). It includes most SQL:2008 data
944types, including INTEGER, NUMERIC, BOOLEAN, CHAR, VARCHAR, DATE, INTERVAL, and
945TIMESTAMP. It also supports storage of binary large objects, including
946pictures, sounds, or video.")
ba8b9f8d 947 (license (license:x11-style "file://COPYRIGHT"))))
5f96f303 948
91477def
GB
949(define-public postgresql-11
950 (package
951 (inherit postgresql)
952 (name "postgresql")
cbfddc2f 953 (version "11.5")
91477def
GB
954 (source (origin
955 (method url-fetch)
956 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
957 version "/postgresql-" version ".tar.bz2"))
958 (sha256
959 (base32
cbfddc2f 960 "106ikalvrilihlvhq7xj7snq98hgbgq6qsgjrd252wgw1c327pvz"))))))
91477def 961
7658d89b
EF
962(define-public postgresql-9.6
963 (package
964 (inherit postgresql)
965 (name "postgresql")
14b80bf6 966 (version "9.6.15")
7658d89b
EF
967 (source (origin
968 (method url-fetch)
969 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
970 version "/postgresql-" version ".tar.bz2"))
971 (sha256
972 (base32
14b80bf6 973 "02hp69h2p02asfblkaahblzdz2zmawd2r11h6237y5j7yadgxn9w"))))))
7658d89b 974
9763102b
TGR
975(define-public python-pymysql
976 (package
977 (name "python-pymysql")
4cb2f29e 978 (version "0.9.3")
9763102b
TGR
979 (source
980 (origin
981 (method url-fetch)
982 (uri (pypi-uri "PyMySQL" version))
983 (sha256
4cb2f29e 984 (base32 "1ry8lxgdc1p3k7gbw20r405jqi5lvhi5wk83kxdbiv8xv3f5kh6q"))))
9763102b
TGR
985 (build-system python-build-system)
986 (native-inputs
987 `(("python-unittest2" ,python-unittest2)))
988 (inputs
989 `(("python-cryptography" ,python-cryptography)))
990 (arguments
991 `(#:tests? #f)) ; tests expect a running MySQL
992 (home-page "https://github.com/PyMySQL/PyMySQL/")
993 (synopsis "Pure-Python MySQL driver")
994 (description
995 "PyMySQL is a pure-Python MySQL client library, based on PEP 249.
996Most public APIs are compatible with @command{mysqlclient} and MySQLdb.")
997 (license license:expat)))
998
999(define-public python2-pymysql
1000 (package-with-python2 python-pymysql))
1001
259a94e9
TD
1002(define-public qdbm
1003 (package
1004 (name "qdbm")
1005 (version "1.8.78")
1006 (source
1007 (origin
1008 (method url-fetch)
1009 (uri (string-append "http://fallabs.com/" name "/"
1010 name "-" version ".tar.gz"))
1011 (sha256
1012 (base32
1013 "0gmpvhn02pkq280ffmn4da1g4mdr1xxz7l80b7y4n7km1mrzwrml"))))
1014 (build-system gnu-build-system)
1015 (arguments
1016 `( #:configure-flags (list (string-append "LDFLAGS=-Wl,-rpath="
1017 (assoc-ref %outputs "out")
1018 "/lib"))))
1019 (home-page "http://fallabs.com/qdbm")
1020 (synopsis "Key-value database")
1021 (description "QDBM is a library of routines for managing a
1022database. The database is a simple data file containing key-value
1023pairs. Every key and value is serial bytes with variable length.
1024Binary data as well as character strings can be used as a key or a
1025value. There is no concept of data tables or data types. Records are
1026organized in a hash table or B+ tree.")
1027 (license license:lgpl2.1+)))
1028
5f96f303
LC
1029(define-public recutils
1030 (package
1031 (name "recutils")
c007e35d 1032 (version "1.8")
5f96f303
LC
1033 (source (origin
1034 (method url-fetch)
1035 (uri (string-append "mirror://gnu/recutils/recutils-"
1036 version ".tar.gz"))
1037 (sha256
1038 (base32
c007e35d 1039 "14xiln4immfsw8isnvwvq0h23f6z0wilpgsc4qzabnrzb5lsx3nz"))))
5f96f303
LC
1040 (build-system gnu-build-system)
1041
c007e35d 1042 (arguments '(#:configure-flags
b747a9db
LF
1043 (list (string-append "--with-bash-headers="
1044 (assoc-ref %build-inputs "bash:include")
c007e35d 1045 "/include/bash"))))
5f96f303 1046
535a69e9 1047 (native-inputs `(("bc" ,bc)
b747a9db 1048 ("bash:include" ,bash "include")
c007e35d
EF
1049 ("check" ,check)
1050 ("libuuid" ,util-linux)
1051 ("pkg-config" ,pkg-config)))
5f96f303
LC
1052
1053 ;; TODO: Add more optional inputs.
5f96f303 1054 (inputs `(("curl" ,curl)
c007e35d 1055 ("libgcrypt" ,libgcrypt)))
5f96f303
LC
1056 (synopsis "Manipulate plain text files as databases")
1057 (description
1058 "GNU Recutils is a set of tools and libraries for creating and
1059manipulating text-based, human-editable databases. Despite being text-based,
1060databases created with Recutils carry all of the expected features such as
c5779c93
LC
1061unique fields, primary keys, time stamps and more. Many different field
1062types are supported, as is encryption.")
ba8b9f8d 1063 (license license:gpl3+)
6fd52309 1064 (home-page "https://www.gnu.org/software/recutils/")))
5f96f303 1065
9df78675
JH
1066(define-public emacs-recutils
1067 (package
1068 (inherit recutils)
1069 (name "emacs-recutils")
1070 (build-system emacs-build-system)
1071 (arguments
1072 '(#:phases
1073 (modify-phases %standard-phases
1074 (add-after 'unpack 'change-directory
1075 (lambda _
1076 (chdir "etc")
1077 #t)))))
1078 (native-inputs '())
1079 (inputs '())
1080 (synopsis "Emacs mode for working with recutils database files")
1081 (description "This package provides an Emacs major mode @code{rec-mode}
1082for working with GNU Recutils text-based, human-editable databases. It
1083supports editing, navigation, and querying of recutils database files
1084including field and record folding.")))
1085
d3c6ad0a
MB
1086(define-public rocksdb
1087 (package
1088 (name "rocksdb")
5ae458be 1089 (version "5.18.3")
d3c6ad0a 1090 (source (origin
8dd36658
MB
1091 (method git-fetch)
1092 (uri (git-reference
1093 (url "https://github.com/facebook/rocksdb")
1094 (commit (string-append "v" version))))
1095 (file-name (git-file-name name version))
d3c6ad0a
MB
1096 (sha256
1097 (base32
5ae458be 1098 "1v2slmmr1dsgf8z0qcfg1y9x1al96859rg48b66p9nsawczd5zv9"))
d3c6ad0a
MB
1099 (modules '((guix build utils)))
1100 (snippet
1101 '(begin
1102 ;; TODO: unbundle gtest.
1103 (delete-file "build_tools/gnu_parallel")
7fa9cca8
MB
1104 (substitute* "Makefile"
1105 (("build_tools/gnu_parallel") "parallel"))
d3c6ad0a
MB
1106 #t))))
1107 (build-system gnu-build-system)
1108 (arguments
7fa9cca8
MB
1109 `(#:make-flags (list "CC=gcc" "V=1"
1110 ;; Ceph requires that RTTI is enabled.
1111 "USE_RTTI=1"
d3c6ad0a 1112 (string-append "INSTALL_PATH="
7fa9cca8
MB
1113 (assoc-ref %outputs "out"))
1114
1115 ;; Running the full test suite takes hours and require
1116 ;; a lot of disk space. Instead we only run a subset
1117 ;; (see .travis.yml and Makefile).
1118 "ROCKSDBTESTS_END=db_tailing_iter_test")
1119 #:test-target "check_some"
d7b344c5
MB
1120 ;; Many tests fail on 32-bit platforms. There are multiple reports about
1121 ;; this upstream, but it's not going to be supported any time soon.
1122 #:tests? (let ((system ,(or (%current-target-system)
1123 (%current-system))))
1124 (or (string-prefix? "x86_64-linux" system)
1125 (string-prefix? "aarch64-linux" system)))
d3c6ad0a
MB
1126 #:phases
1127 (modify-phases %standard-phases
1128 (add-after 'unpack 'patch-Makefile
1129 (lambda _
1130 (substitute* "Makefile"
f91c677c
MB
1131 ;; Don't depend on the static library when installing.
1132 (("install: install-static")
1133 "install: install-shared")
d3c6ad0a
MB
1134 (("#!/bin/sh") (string-append "#!" (which "sh"))))
1135 #t))
1136 (delete 'configure)
d7b344c5
MB
1137 ;; The default target is only needed for tests and built on demand.
1138 (delete 'build)
1139 (add-before 'check 'disable-optimizations
1140 (lambda _
1141 ;; Prevent the build from passing '-march=native' to the compiler.
1142 (setenv "PORTABLE" "1")
1143 #t))
d3c6ad0a
MB
1144 (add-before 'check 'disable-failing-tests
1145 (lambda _
1146 (substitute* "Makefile"
1147 ;; These tests reliably fail due to "Too many open files".
1148 (("^[[:blank:]]+env_test[[:blank:]]+\\\\") "\\")
1149 (("^[[:blank:]]+persistent_cache_test[[:blank:]]+\\\\") "\\"))
1150 #t))
7fa9cca8 1151 (add-after 'check 'build
f91c677c 1152 ;; The default build target is a debug build for tests. The
7fa9cca8
MB
1153 ;; install target depends on the "shared_lib" release target
1154 ;; so we build it here for clarity.
1155 (lambda* (#:key (make-flags '()) parallel-build? #:allow-other-keys)
1156 (apply invoke "make" "shared_lib"
1157 `(,@(if parallel-build?
1158 `("-j" ,(number->string (parallel-job-count)))
1159 '())
1160 ,@make-flags)))))))
d3c6ad0a
MB
1161 (native-inputs
1162 `(("parallel" ,parallel)
1163 ("perl" ,perl)
1164 ("procps" ,procps)
77e52190
MB
1165 ("python" ,python-2)
1166 ("which" ,which)))
d3c6ad0a
MB
1167 (inputs
1168 `(("bzip2" ,bzip2)
1169 ("gflags" ,gflags)
1170 ("jemalloc" ,jemalloc)
1171 ("lz4" ,lz4)
1172 ("snappy" ,snappy)
1173 ("zlib" ,zlib)))
1174 (home-page "http://rocksdb.org/")
1175 (synopsis "Persistent key-value store for fast storage")
1176 (description
1177 "RocksDB is a library that forms the core building block for a fast
1178key-value server, especially suited for storing data on flash drives. It
1179has a @dfn{Log-Structured-Merge-Database} (LSM) design with flexible tradeoffs
1180between @dfn{Write-Amplification-Factor} (WAF), @dfn{Read-Amplification-Factor}
1181(RAF) and @dfn{Space-Amplification-Factor} (SAF). It has multi-threaded
1182compactions, making it specially suitable for storing multiple terabytes of
1183data in a single database. RocksDB is partially based on @code{LevelDB}.")
7fa9cca8
MB
1184 ;; RocksDB is dual licensed under GPL2 and ASL 2.0. Some header
1185 ;; files carry the 3-clause BSD license.
1186 (license (list license:gpl2 license:asl2.0 license:bsd-3))))
d3c6ad0a 1187
b92d02d9
RJ
1188(define-public sparql-query
1189 (package
1190 (name "sparql-query")
1191 (version "1.1")
1192 (source (origin
1193 (method url-fetch)
1194 (uri (string-append "https://github.com/tialaramex/"
1195 name "/archive/" version ".tar.gz"))
1196 (sha256
1197 (base32 "0yq3k20472rv8npcc420q9ab6idy584g5y0q501d360k5q0ggr8w"))
1198 (file-name (string-append name "-" version ".tar.gz"))))
1199 (build-system gnu-build-system)
1200 (inputs
1201 `(("readline" ,readline)
1202 ("ncurses" ,ncurses)
1203 ("glib" ,glib)
1204 ("libxml2" ,libxml2)
1205 ("curl" ,curl)))
1206 (native-inputs
1207 `(("pkg-config" ,pkg-config)))
1208 (arguments
1209 `(#:make-flags '("CC=gcc")
1210 #:phases
1211 (modify-phases %standard-phases
1212 (delete 'configure)
1213 ;; The Makefile uses git to obtain versioning information. This phase
1214 ;; substitutes the git invocation with the package version.
1215 (add-after 'unpack 'remove-git-dependency
1216 (lambda _
1217 (substitute* "Makefile"
1218 (("^gitrev :=.*$")
96272e28
MW
1219 (string-append "gitrev = \"v" ,version "\"")))
1220 #t))
b92d02d9
RJ
1221 ;; The install phase of the Makefile assumes $PREFIX/usr/local/bin.
1222 ;; This replacement does the same thing, except for using $PREFIX/bin
1223 ;; instead.
1224 (replace 'install
1225 (lambda* (#:key outputs #:allow-other-keys)
1226 (let* ((out (assoc-ref outputs "out"))
1227 (bin (string-append out "/bin")))
1228 (install-file "sparql-query" bin)
96272e28
MW
1229 (symlink (string-append bin "/sparql-query")
1230 (string-append bin "/sparql-update")))
1231 #t))
b92d02d9
RJ
1232 (replace 'check
1233 (lambda* (#:key make-flags #:allow-other-keys)
96272e28
MW
1234 (apply invoke "make" `(,@make-flags "scan-test"))
1235 (invoke "./scan-test"))))))
b92d02d9
RJ
1236 (home-page "https://github.com/tialaramex/sparql-query/")
1237 (synopsis "Command-line tool for accessing SPARQL endpoints over HTTP")
1238 (description "Sparql-query is a command-line tool for accessing SPARQL
36a4366d 1239endpoints over HTTP. It has been intentionally designed to @code{feel} similar to
b92d02d9
RJ
1240tools for interrogating SQL databases. For example, you can enter a query over
1241several lines, using a semi-colon at the end of a line to indicate the end of
1242your query. It also supports readline so that you can more easily recall and
1243edit previous queries, even across sessions. It can be used non-interactively,
1244for example from a shell script.")
1245 ;; Some files (like scan-sparql.c) contain a GPLv3+ license header, while
1246 ;; others (like sparql-query.c) contain a GPLv2+ license header.
ba8b9f8d 1247 (license (list license:gpl3+))))
b92d02d9 1248
cabe8f18
CB
1249(define-public sqitch
1250 (package
1251 (name "sqitch")
f64cd5d1 1252 (version "1.0.0")
cabe8f18
CB
1253 (source
1254 (origin
1255 (method url-fetch)
1256 (uri (string-append
f64cd5d1
TGR
1257 "mirror://cpan/authors/id/D/DW/DWHEELER/App-Sqitch-v"
1258 version ".tar.gz"))
cabe8f18 1259 (sha256
f64cd5d1 1260 (base32 "0p4wraqiscvwmmsvfqfy65blgsilwpvd9zj4d2zvm2xdx70ncr7l"))))
cabe8f18
CB
1261 (build-system perl-build-system)
1262 (arguments
1263 '(#:phases
1264 (modify-phases %standard-phases
1265 (add-before 'check 'set-check-environment
1266 (lambda _
1267 (setenv "TZ" "UTC")
1268 (setenv "HOME" "/tmp")
1269 #t))
1270 (add-after 'install 'wrap-program
1271 (lambda* (#:key outputs #:allow-other-keys)
1272 (let* ((out (assoc-ref outputs "out"))
1273 (path (getenv "PERL5LIB")))
1274 (wrap-program (string-append out "/bin/sqitch")
1275 `("PERL5LIB" ":" prefix
1276 (,(string-append out "/lib/perl5/site_perl"
1277 ":"
1278 path)))))
1279 #t)))))
1280 (native-inputs
1281 `(("perl-capture-tiny" ,perl-capture-tiny)
1282 ("perl-io-pager" ,perl-io-pager)
1283 ("perl-module-build" ,perl-module-build)
1284 ("perl-module-runtime" ,perl-module-runtime)
1285 ("perl-path-class" ,perl-path-class)
1286 ("perl-test-deep" ,perl-test-deep)
1287 ("perl-test-dir" ,perl-test-dir)
1288 ("perl-test-exception" ,perl-test-exception)
1289 ("perl-test-file" ,perl-test-file)
1290 ("perl-test-file-contents" ,perl-test-file-contents)
1291 ("perl-test-mockmodule" ,perl-test-mockmodule)
1292 ("perl-test-nowarnings" ,perl-test-nowarnings)
1293 ("perl-test-warn" ,perl-test-warn)))
1294 (inputs
1295 `(("perl-class-xsaccessor" ,perl-class-xsaccessor)
1296 ("perl-clone" ,perl-clone)
1297 ("perl-config-gitlike" ,perl-config-gitlike)
1298 ("perl-datetime" ,perl-datetime)
1299 ("perl-datetime-timezone" ,perl-datetime-timezone)
1300 ("perl-dbd-pg" ,perl-dbd-pg)
1301 ("perl-dbi" ,perl-dbi)
1302 ("perl-devel-stacktrace" ,perl-devel-stacktrace)
1303 ("perl-encode-locale" ,perl-encode-locale)
cabe8f18
CB
1304 ("perl-hash-merge" ,perl-hash-merge)
1305 ("perl-ipc-run3" ,perl-ipc-run3)
1306 ("perl-ipc-system-simple" ,perl-ipc-system-simple)
1307 ("perl-libintl-perl" ,perl-libintl-perl)
1308 ("perl-list-moreutils" ,perl-list-moreutils)
1309 ("perl-moo" ,perl-moo)
1310 ("perl-mysql-config" ,perl-mysql-config)
1311 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
1312 ("perl-path-class" ,perl-path-class)
1313 ("perl-perlio-utf8_strict" ,perl-perlio-utf8_strict)
1314 ("perl-string-formatter" ,perl-string-formatter)
1315 ("perl-string-shellquote" ,perl-string-shellquote)
1316 ("perl-sub-exporter" ,perl-sub-exporter)
1317 ("perl-template-tiny" ,perl-template-tiny)
1318 ("perl-template-toolkit" ,perl-template-toolkit)
1319 ("perl-throwable" ,perl-throwable)
1320 ("perl-try-tiny" ,perl-try-tiny)
1321 ("perl-type-tiny" ,perl-type-tiny)
1322 ("perl-type-tiny-xs" ,perl-type-tiny-xs)
1323 ("perl-uri" ,perl-uri)
1324 ("perl-uri-db" ,perl-uri-db)))
1325 (home-page "https://sqitch.org/")
1326 (synopsis "Database change management tool")
1327 (description
1328 "Sqitch is a standalone change management system for database schemas,
1329which uses SQL to describe changes.")
1330 (license license:x11)))
1331
311f06c9
TGR
1332(define-public sqlcrush
1333 ;; Unfortunately, there is no proper upstream release and may never be.
1334 (let ((commit "b5f6868f189566a26eecc78d0f0659813c1aa98a")
1335 (revision "1"))
1336 (package
1337 (name "sqlcrush")
1338 (version (git-version "0.1.5" revision commit))
1339 (source (origin
1340 (method git-fetch)
1341 (uri (git-reference
1342 (url "https://github.com/coffeeandscripts/sqlcrush.git")
1343 (commit commit)))
1344 (file-name (git-file-name name version))
1345 (sha256
1346 (base32
1347 "0x3wy40r93p0jv3nbwj9a77wa4ff697d13r0wffmm7q9h3mzsww8"))))
1348 (build-system python-build-system)
1349 (inputs
1350 `(("python-cryptography" ,python-cryptography)
1351 ("python-psycopg2" ,python-psycopg2)
1352 ("python-pymysql" ,python-pymysql)
1353 ("python-sqlalchemy" ,python-sqlalchemy)))
1354 (home-page "https://github.com/coffeeandscripts/sqlcrush")
1355 (synopsis "Text console-based database viewer and editor")
1356 (description
1357 "SQLcrush lets you view and edit a database directly from the text
1358console through an ncurses interface. You can explore each table's structure,
1359browse and edit the contents, add and delete entries, all while tracking your
1360changes.")
1361 (license license:gpl3+)))) ; no headers, see README.md
1362
db60b1d9
LC
1363(define-public tdb
1364 (package
1365 (name "tdb")
c0de48c9 1366 (version "1.4.2")
db60b1d9
LC
1367 (source (origin
1368 (method url-fetch)
ca473fc2 1369 (uri (string-append "https://www.samba.org/ftp/tdb/tdb-"
db60b1d9
LC
1370 version ".tar.gz"))
1371 (sha256
1372 (base32
c0de48c9 1373 "0jh0iqbb6pkvqrqn033w5g6gwa4bdgkvp49z0qpkk3h2wk6b4h4h"))))
db60b1d9
LC
1374 (build-system gnu-build-system)
1375 (arguments
6ccb7814
EF
1376 '(#:phases
1377 (modify-phases %standard-phases
1378 (replace 'configure
1379 (lambda* (#:key outputs #:allow-other-keys)
1380 (let ((out (assoc-ref outputs "out")))
1381 ;; The 'configure' script is a wrapper for Waf and
1382 ;; doesn't recognize things like '--enable-fast-install'.
96272e28
MW
1383 (invoke "./configure"
1384 (string-append "--prefix=" out))))))))
db60b1d9
LC
1385 (native-inputs
1386 `(;; TODO: Build the documentation.
1387 ;; ("docbook-xsl" ,docbook-xsl)
1388 ;; ("libxml2" ,libxml2)
1389 ;; ("libxslt" ,libxslt)
97dcedbd
MB
1390 ("python" ,python) ;for the Waf build system
1391 ("which" ,which)))
1abd0904 1392 (home-page "https://tdb.samba.org/")
35b9e423 1393 (synopsis "Trivial database")
db60b1d9
LC
1394 (description
1395 "TDB is a Trivial Database. In concept, it is very much like GDBM,
1396and BSD's DB except that it allows multiple simultaneous writers and uses
1397locking internally to keep writers from trampling on each other. TDB is also
1398extremely small.")
ba8b9f8d 1399 (license license:lgpl3+)))
274da61d
LC
1400
1401(define-public perl-dbi
1402 (package
1403 (name "perl-dbi")
da93d424 1404 (version "1.642")
274da61d
LC
1405 (source (origin
1406 (method url-fetch)
1407 (uri (string-append
1408 "mirror://cpan/authors/id/T/TI/TIMB/DBI-"
1409 version ".tar.gz"))
1410 (sha256
1411 (base32
da93d424 1412 "0pbzqazrx7pnw4nbyaf27in4b6yddkirbd2ws7mnqa2n7812a81z"))))
274da61d
LC
1413 (build-system perl-build-system)
1414 (synopsis "Database independent interface for Perl")
1415 (description "This package provides an database interface for Perl.")
9aba9b12 1416 (home-page "https://metacpan.org/release/DBI")
2f3108ad 1417 (license license:perl-license)))
274da61d 1418
feae3395
EB
1419(define-public perl-dbix-class
1420 (package
1421 (name "perl-dbix-class")
435897c0 1422 (version "0.082841")
feae3395
EB
1423 (source
1424 (origin
1425 (method url-fetch)
1426 (uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
1427 "DBIx-Class-" version ".tar.gz"))
1428 (sha256
1429 (base32
435897c0 1430 "1gf3hgv8f9rnr8bl4ljgsqk4aliphmvljhsk4282kvdc4mcgh1fp"))))
feae3395
EB
1431 (build-system perl-build-system)
1432 (native-inputs
1433 `(("perl-dbd-sqlite" ,perl-dbd-sqlite)
1434 ("perl-file-temp" ,perl-file-temp)
2f837cf7 1435 ("perl-module-install" ,perl-module-install)
feae3395
EB
1436 ("perl-package-stash" ,perl-package-stash)
1437 ("perl-test-deep" ,perl-test-deep)
1438 ("perl-test-exception" ,perl-test-exception)
1439 ("perl-test-warn" ,perl-test-warn)))
1440 (propagated-inputs
1441 `(("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
1442 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
1443 ("perl-class-inspector" ,perl-class-inspector)
1444 ("perl-config-any" ,perl-config-any)
1445 ("perl-context-preserve" ,perl-context-preserve)
1446 ("perl-data-dumper-concise" ,perl-data-dumper-concise)
1447 ("perl-data-page" ,perl-data-page)
1448 ("perl-dbi" ,perl-dbi)
1449 ("perl-devel-globaldestruction" ,perl-devel-globaldestruction)
1450 ("perl-hash-merge" ,perl-hash-merge)
1451 ("perl-module-find" ,perl-module-find)
1452 ("perl-moo" ,perl-moo)
1453 ("perl-mro-compat" ,perl-mro-compat)
1454 ("perl-namespace-clean" ,perl-namespace-clean)
1455 ("perl-path-class" ,perl-path-class)
1456 ("perl-scalar-list-utils" ,perl-scalar-list-utils)
1457 ("perl-scope-guard" ,perl-scope-guard)
1458 ("perl-sql-abstract" ,perl-sql-abstract)
1459 ("perl-sub-name" ,perl-sub-name)
1460 ("perl-text-balanced" ,perl-text-balanced)
1461 ("perl-try-tiny" ,perl-try-tiny)))
9aba9b12 1462 (home-page "https://metacpan.org/release/DBIx-Class")
feae3395
EB
1463 (synopsis "Extensible and flexible object <-> relational mapper")
1464 (description "An SQL to OO mapper with an object API inspired by
1465Class::DBI (with a compatibility layer as a springboard for porting) and a
1466resultset API that allows abstract encapsulation of database operations. It
1467aims to make representing queries in your code as perl-ish as possible while
1468still providing access to as many of the capabilities of the database as
1469possible, including retrieving related records from multiple tables in a
1470single query, \"JOIN\", \"LEFT JOIN\", \"COUNT\", \"DISTINCT\", \"GROUP BY\",
1471\"ORDER BY\" and \"HAVING\" support.")
2f3108ad 1472 (license license:perl-license)))
e61fd0f0 1473
4e4039e5
EB
1474(define-public perl-dbix-class-cursor-cached
1475 (package
1476 (name "perl-dbix-class-cursor-cached")
180cb81b 1477 (version "1.001004")
4e4039e5
EB
1478 (source
1479 (origin
1480 (method url-fetch)
1481 (uri (string-append "mirror://cpan/authors/id/A/AR/ARCANEZ/"
1482 "DBIx-Class-Cursor-Cached-" version ".tar.gz"))
1483 (sha256
1484 (base32
180cb81b 1485 "09b2jahn2x12qm4f7qm1jzsxbz7qn1czp6a3fnl5l2i3l4r5421p"))))
4e4039e5
EB
1486 (build-system perl-build-system)
1487 (native-inputs
1488 `(("perl-cache-cache" ,perl-cache-cache)
2f837cf7
MB
1489 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1490 ("perl-module-install" ,perl-module-install)))
4e4039e5
EB
1491 (propagated-inputs
1492 `(("perl-carp-clan" ,perl-carp-clan)
1493 ("perl-dbix-class" ,perl-dbix-class)))
9aba9b12 1494 (home-page "https://metacpan.org/release/DBIx-Class-Cursor-Cached")
4e4039e5
EB
1495 (synopsis "Cursor with built-in caching support")
1496 (description "DBIx::Class::Cursor::Cached provides a cursor class with
1497built-in caching support.")
2f3108ad 1498 (license license:perl-license)))
4e4039e5 1499
e61fd0f0
EB
1500(define-public perl-dbix-class-introspectablem2m
1501 (package
1502 (name "perl-dbix-class-introspectablem2m")
7a462b80 1503 (version "0.001002")
e61fd0f0
EB
1504 (source
1505 (origin
1506 (method url-fetch)
68a9d6df 1507 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
e61fd0f0
EB
1508 "DBIx-Class-IntrospectableM2M-" version ".tar.gz"))
1509 (sha256
1510 (base32
7a462b80 1511 "1w47rh2241iy5x3a9bqsyd5kdp9sk43dksr99frzv4qn4jsazfn6"))))
e61fd0f0 1512 (build-system perl-build-system)
2f837cf7
MB
1513 (native-inputs
1514 `(("perl-module-install" ,perl-module-install)))
e61fd0f0
EB
1515 (propagated-inputs
1516 `(("perl-dbix-class" ,perl-dbix-class)))
9aba9b12 1517 (home-page "https://metacpan.org/release/DBIx-Class-IntrospectableM2M")
e61fd0f0
EB
1518 (synopsis "Introspect many-to-many relationships")
1519 (description "Because the many-to-many relationships are not real
1520relationships, they can not be introspected with DBIx::Class. Many-to-many
1521relationships are actually just a collection of convenience methods installed
1522to bridge two relationships. This DBIx::Class component can be used to store
1523all relevant information about these non-relationships so they can later be
1524introspected and examined.")
2f3108ad 1525 (license license:perl-license)))
708155df
EB
1526
1527(define-public perl-dbix-class-schema-loader
1528 (package
1529 (name "perl-dbix-class-schema-loader")
1672e7e7 1530 (version "0.07049")
708155df
EB
1531 (source
1532 (origin
1533 (method url-fetch)
1534 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
1535 "DBIx-Class-Schema-Loader-" version ".tar.gz"))
1536 (sha256
1537 (base32
1672e7e7 1538 "0r57fv71ypxafb85cpxph1hdqii7ipjwvc19yb6fpkvq2ggcssg8"))))
708155df
EB
1539 (build-system perl-build-system)
1540 (native-inputs
1541 `(("perl-config-any" ,perl-config-any)
1542 ("perl-config-general" ,perl-config-general)
1543 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1544 ("perl-dbix-class-introspectablem2m" ,perl-dbix-class-introspectablem2m)
2f837cf7 1545 ("perl-module-install" ,perl-module-install)
708155df
EB
1546 ("perl-moose" ,perl-moose)
1547 ("perl-moosex-markasmethods" ,perl-moosex-markasmethods)
1548 ("perl-moosex-nonmoose" ,perl-moosex-nonmoose)
1549 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
1550 ("perl-test-deep" ,perl-test-deep)
1551 ("perl-test-differences" ,perl-test-differences)
1552 ("perl-test-exception" ,perl-test-exception)
1553 ("perl-test-pod" ,perl-test-pod)
1554 ("perl-test-warn" ,perl-test-warn)))
1555 (propagated-inputs
1556 `(("perl-class-unload" ,perl-class-unload)
1557 ("perl-class-inspector" ,perl-class-inspector)
1558 ("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
1559 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
1560 ("perl-carp-clan" ,perl-carp-clan)
1561 ("perl-data-dump" ,perl-data-dump)
1562 ("perl-dbix-class" ,perl-dbix-class)
1563 ("perl-hash-merge" ,perl-hash-merge)
1564 ("perl-list-moreutils" ,perl-list-moreutils)
1565 ("perl-lingua-en-inflect-phrase" ,perl-lingua-en-inflect-phrase)
1566 ("perl-lingua-en-inflect-number" ,perl-lingua-en-inflect-number)
1567 ("perl-lingua-en-tagger" ,perl-lingua-en-tagger)
1568 ("perl-namespace-clean" ,perl-namespace-clean)
1569 ("perl-mro-compat" ,perl-mro-compat)
1570 ("perl-scope-guard" ,perl-scope-guard)
1571 ("perl-string-camelcase" ,perl-string-camelcase)
1572 ("perl-string-toidentifier-en" ,perl-string-toidentifier-en)
1573 ("perl-sub-name" ,perl-sub-name)
1574 ("perl-try-tiny" ,perl-try-tiny)))
1575 (arguments `(#:tests? #f)) ;TODO: t/20invocations.t fails
9aba9b12 1576 (home-page "https://metacpan.org/release/DBIx-Class-Schema-Loader")
708155df
EB
1577 (synopsis "Create a DBIx::Class::Schema based on a database")
1578 (description "DBIx::Class::Schema::Loader automates the definition of a
1579DBIx::Class::Schema by scanning database table definitions and setting up the
1580columns, primary keys, unique constraints and relationships.")
2f3108ad 1581 (license license:perl-license)))
274da61d 1582
186eb132
EB
1583(define-public perl-dbd-pg
1584 (package
1585 (name "perl-dbd-pg")
8c078dde 1586 (version "3.7.4")
186eb132
EB
1587 (source
1588 (origin
1589 (method url-fetch)
1590 (uri (string-append "mirror://cpan/authors/id/T/TU/TURNSTEP/"
1591 "DBD-Pg-" version ".tar.gz"))
1592 (sha256
1593 (base32
8c078dde 1594 "0gkqlvbmzbdm0g4k328nlkjdg3wrjm5i2n9jxj1i8sqxkm79rylz"))))
186eb132
EB
1595 (build-system perl-build-system)
1596 (native-inputs
1597 `(("perl-dbi" ,perl-dbi)))
1598 (propagated-inputs
1599 `(("perl-dbi" ,perl-dbi)
1600 ("postgresql" ,postgresql)))
9aba9b12 1601 (home-page "https://metacpan.org/release/DBD-Pg")
186eb132 1602 (synopsis "DBI PostgreSQL interface")
f33e71fc
LC
1603 (description "This package provides a PostgreSQL driver for the Perl5
1604@dfn{Database Interface} (DBI).")
2f3108ad 1605 (license license:perl-license)))
186eb132 1606
4b7857a4
RW
1607(define-public perl-dbd-mysql
1608 (package
1609 (name "perl-dbd-mysql")
49596a54 1610 (version "4.050")
4b7857a4
RW
1611 (source
1612 (origin
1613 (method url-fetch)
49596a54 1614 (uri (string-append "mirror://cpan/authors/id/D/DV/DVEEDEN/"
4b7857a4
RW
1615 "DBD-mysql-" version ".tar.gz"))
1616 (sha256
49596a54 1617 (base32 "0y4djb048i09dk19av7mzfb3khr72vw11p3ayw2p82jsy4gm8j2g"))))
4b7857a4 1618 (build-system perl-build-system)
702a87f2
TGR
1619 (arguments
1620 `(#:phases
1621 (modify-phases %standard-phases
1622 (add-before 'configure 'skip-library-detection
1623 ;; Avoid depencies on perl-devel-checklib, openssl, and zlib. They
1624 ;; are really only needed for the test suite; their absence does not
1625 ;; affect the build or the end result.
1626 (lambda _
1627 (substitute* "Makefile.PL"
1628 (("use Devel::CheckLib;" match)
1629 (string-append "# " match))
1630 (("assert_lib")
1631 "print"))
1632 #t)))
1633 ;; Tests require running MySQL server.
1634 #:tests? #f))
4b7857a4
RW
1635 (propagated-inputs
1636 `(("perl-dbi" ,perl-dbi)
2b8491fb
JL
1637 ("mysql" ,mariadb "lib")
1638 ("mysql-dev" ,mariadb "dev")))
9aba9b12 1639 (home-page "https://metacpan.org/release/DBD-mysql")
4b7857a4
RW
1640 (synopsis "DBI MySQL interface")
1641 (description "This package provides a MySQL driver for the Perl5
1642@dfn{Database Interface} (DBI).")
2f3108ad 1643 (license license:perl-license)))
4b7857a4 1644
274da61d
LC
1645(define-public perl-dbd-sqlite
1646 (package
1647 (name "perl-dbd-sqlite")
d49bdbca 1648 (version "1.62")
274da61d
LC
1649 (source (origin
1650 (method url-fetch)
1651 (uri (string-append
1652 "mirror://cpan/authors/id/I/IS/ISHIGAKI/DBD-SQLite-"
1653 version ".tar.gz"))
1654 (sha256
1655 (base32
d49bdbca 1656 "0p78ri1q6xpc1i98i6mlriv8n66iz8r5r11dlsknjm4y58rfz0mx"))))
274da61d
LC
1657 (build-system perl-build-system)
1658 (inputs `(("sqlite" ,sqlite)))
1659 (propagated-inputs `(("perl-dbi" ,perl-dbi)))
1660 (synopsis "SQlite interface for Perl")
1661 (description "DBD::SQLite is a Perl DBI driver for SQLite, that includes
1662the entire thing in the distribution. So in order to get a fast transaction
1663capable RDBMS working for your Perl project you simply have to install this
1664module, and nothing else.")
2f3108ad 1665 (license license:perl-license)
9aba9b12 1666 (home-page "https://metacpan.org/release/DBD-SQLite")))
14e84b2d 1667
55916fa2
CB
1668(define-public perl-mysql-config
1669 (package
1670 (name "perl-mysql-config")
1671 (version "1.04")
1672 (source
1673 (origin
1674 (method url-fetch)
1675 (uri (string-append
1676 "mirror://cpan/authors/id/D/DA/DARREN/MySQL-Config-"
1677 version
1678 ".tar.gz"))
1679 (sha256
1680 (base32
1681 "1svn7ccw2gc4cazvc58j84rxhnc9vs01zpird0l8460598j475qr"))))
1682 (build-system perl-build-system)
1683 (home-page "https://metacpan.org/release/MySQL-Config")
1684 (synopsis "Parse and utilize MySQL's /etc/my.cnf and ~/.my.cnf files")
1685 (description
1686 "@code{MySQL::Config} emulates the @code{load_defaults} function from
1687libmysqlclient. It will fill an aray with long options, ready to be parsed by
1688@code{Getopt::Long}.")
1689 (license license:perl-license)))
1690
dd90952e
EB
1691(define-public perl-sql-abstract
1692 (package
1693 (name "perl-sql-abstract")
2f813be3 1694 (version "1.86")
dd90952e
EB
1695 (source
1696 (origin
1697 (method url-fetch)
439980b7 1698 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
dd90952e
EB
1699 "SQL-Abstract-" version ".tar.gz"))
1700 (sha256
2f813be3 1701 (base32 "1pwcm8hwxcgidyyrak37lx69d85q728jxsb0b14jz93gbvdgg9z7"))))
dd90952e
EB
1702 (build-system perl-build-system)
1703 (native-inputs
9dab5017
MB
1704 `(("perl-module-install" ,perl-module-install)
1705 ("perl-test-deep" ,perl-test-deep)
dd90952e
EB
1706 ("perl-test-exception" ,perl-test-exception)
1707 ("perl-test-warn" ,perl-test-warn)))
1708 (propagated-inputs
1709 `(("perl-hash-merge" ,perl-hash-merge)
1710 ("perl-moo" ,perl-moo)
1711 ("perl-mro-compat" ,perl-mro-compat)
1712 ("perl-text-balanced" ,perl-text-balanced)))
9aba9b12 1713 (home-page "https://metacpan.org/release/SQL-Abstract")
dd90952e
EB
1714 (synopsis "Generate SQL from Perl data structures")
1715 (description "This module was inspired by the excellent DBIx::Abstract.
1716While based on the concepts used by DBIx::Abstract, the concepts used have
1717been modified to make the SQL easier to generate from Perl data structures.
1718The underlying idea is for this module to do what you mean, based on the data
1719structures you provide it, so that you don't have to modify your code every
e881752c 1720time your data changes.")
2f3108ad 1721 (license license:perl-license)))
14e84b2d 1722
b4dcb026
EB
1723(define-public perl-sql-splitstatement
1724 (package
1725 (name "perl-sql-splitstatement")
1726 (version "1.00020")
1727 (source
1728 (origin
1729 (method url-fetch)
1730 (uri (string-append "mirror://cpan/authors/id/E/EM/EMAZEP/"
1731 "SQL-SplitStatement-" version ".tar.gz"))
1732 (sha256
1733 (base32
1734 "0bqg45k4c9qkb2ypynlwhpvzsl4ssfagmsalys18s5c79ps30z7p"))))
1735 (build-system perl-build-system)
1736 (native-inputs
1737 `(("perl-test-exception" ,perl-test-exception)))
1738 (propagated-inputs
1739 `(("perl-class-accessor" ,perl-class-accessor)
1740 ("perl-list-moreutils" ,perl-list-moreutils)
1741 ("perl-regexp-common" ,perl-regexp-common)
1742 ("perl-sql-tokenizer" ,perl-sql-tokenizer)))
9aba9b12 1743 (home-page "https://metacpan.org/release/SQL-SplitStatement")
b4dcb026
EB
1744 (synopsis "Split SQL code into atomic statements")
1745 (description "This module tries to split any SQL code, even including
1746non-standard extensions, into the atomic statements it is composed of.")
2f3108ad 1747 (license license:perl-license)))
b4dcb026 1748
718c89c1
EB
1749(define-public perl-sql-tokenizer
1750 (package
1751 (name "perl-sql-tokenizer")
1752 (version "0.24")
1753 (source
1754 (origin
1755 (method url-fetch)
1756 (uri (string-append "mirror://cpan/authors/id/I/IZ/IZUT/"
1757 "SQL-Tokenizer-" version ".tar.gz"))
1758 (sha256
1759 (base32
1760 "1qa2dfbzdlr5qqdam9yn78z5w3al5r8577x06qan8wv58ay6ka7s"))))
1761 (build-system perl-build-system)
9aba9b12 1762 (home-page "https://metacpan.org/release/SQL-Tokenizer")
718c89c1
EB
1763 (synopsis "SQL tokenizer")
1764 (description "SQL::Tokenizer is a tokenizer for SQL queries. It does not
1765claim to be a parser or query verifier. It just creates sane tokens from a
1766valid SQL query.")
2f3108ad 1767 (license license:perl-license)))
718c89c1 1768
14e84b2d
JD
1769(define-public unixodbc
1770 (package
1771 (name "unixodbc")
8327ffcc 1772 (version "2.3.7")
14e84b2d
JD
1773 (source (origin
1774 (method url-fetch)
e881752c 1775 (uri
14e84b2d 1776 (string-append
3fef0a2f
EF
1777 "ftp://ftp.unixodbc.org/pub/unixODBC/unixODBC-"
1778 version ".tar.gz"))
14e84b2d 1779 (sha256
8327ffcc 1780 (base32 "0xry3sg497wly8f7715a7gwkn2k36bcap0mvzjw74jj53yx6kwa5"))))
14e84b2d
JD
1781 (build-system gnu-build-system)
1782 (synopsis "Data source abstraction library")
1783 (description "Unixodbc is a library providing an API with which to access
1784data sources. Data sources include SQL Servers and any software with an ODBC
1785Driver.")
ba8b9f8d 1786 (license license:lgpl2.1+)
14e84b2d
JD
1787 ;; COPYING contains copy of lgpl2.1 - but copyright notices just say "LGPL"
1788 (home-page "http://www.unixodbc.org")))
b4a9c924
EB
1789
1790(define-public unqlite
1791 (package
1792 (name "unqlite")
1793 (version "1.1.6")
1794 (source (origin
1795 (method url-fetch)
1796 ;; Contains bug fixes against the official release, and has an
1797 ;; autotooled build system.
1798 (uri (string-append "https://github.com/aidin36/tocc/releases/"
1799 "download/v1.0.0/"
1800 "unqlite-unofficial-" version ".tar.gz"))
1801 (sha256
1802 (base32
1803 "1sbpvhg15gadq0mpcy16q7k3rkg4b4dicpnn5xifpkpn02sqik3s"))))
1804 (build-system gnu-build-system)
1805 (arguments `(#:tests? #f)) ;No check target
1806 (home-page "http://www.unqlite.org")
1807 (synopsis "In-memory key/value and document store")
1808 (description
1809 "UnQLite is an in-process software library which implements a
1810self-contained, serverless, zero-configuration, transactional NoSQL
1811database engine. UnQLite is a document store database similar to
1812MongoDB, Redis, CouchDB, etc. as well as a standard Key/Value store
69b4ffcf 1813similar to BerkeleyDB, LevelDB, etc.")
ba8b9f8d 1814 (license license:bsd-2)))
463f6766
DT
1815
1816(define-public redis
1817 (package
1818 (name "redis")
793a66e5 1819 (version "4.0.10")
463f6766
DT
1820 (source (origin
1821 (method url-fetch)
1822 (uri (string-append "http://download.redis.io/releases/redis-"
1823 version".tar.gz"))
1824 (sha256
1825 (base32
793a66e5 1826 "194cydhv3hf4v95ifvjvsqrs4jn3ffrkg5lvxj5d3y04lwsp9dhx"))))
463f6766
DT
1827 (build-system gnu-build-system)
1828 (arguments
1829 '(#:tests? #f ; tests related to master/slave and replication fail
1830 #:phases (modify-phases %standard-phases
1831 (delete 'configure))
1832 #:make-flags `("CC=gcc"
1833 "MALLOC=libc"
b25f060f 1834 "LDFLAGS=-ldl"
463f6766
DT
1835 ,(string-append "PREFIX="
1836 (assoc-ref %outputs "out")))))
1837 (synopsis "Key-value cache and store")
1838 (description "Redis is an advanced key-value cache and store. Redis
1839supports many data structures including strings, hashes, lists, sets, sorted
1840sets, bitmaps and hyperloglogs.")
1841 (home-page "http://redis.io/")
ba8b9f8d 1842 (license license:bsd-3)))
a65e2a02 1843
1844(define-public kyotocabinet
1845 (package
1846 (name "kyotocabinet")
245e7a68 1847 (version "1.2.77")
a65e2a02 1848 (source (origin
1849 (method url-fetch)
1850 (uri (string-append "http://fallabs.com/kyotocabinet/pkg/"
1851 name "-" version ".tar.gz"))
1852 (sha256
1853 (base32
245e7a68 1854 "1rlx4307adbzd842b4npq6cwlw8h010ingxaz3qz1ijc70lr72an"))))
a65e2a02 1855 (build-system gnu-build-system)
1856 (arguments
1857 `(#:configure-flags
1858 (list
9d59023e 1859 "--disable-opt" ;"-march=native". XXX this also turns off -O0.
a65e2a02 1860 (string-append "LDFLAGS=-Wl,-rpath="
1861 (assoc-ref %outputs "out") "/lib"))))
1862 (inputs `(("zlib" ,zlib)))
1863 (home-page "http://fallabs.com/kyotocabinet/")
1864 (synopsis
1865 "Kyoto Cabinet is a modern implementation of the DBM database")
1866 (description
1867 "Kyoto Cabinet is a standalone file-based database that supports Hash
1868and B+ Tree data storage models. It is a fast key-value lightweight
1869database and supports many programming languages. It is a NoSQL database.")
ba8b9f8d 1870 (license license:gpl3+)))
6242b314 1871
bdc11dc4 1872(define-public tokyocabinet
1873 (package
1874 (name "tokyocabinet")
1875 (version "1.4.48")
1876 (source
1877 (origin
1878 (method url-fetch)
1879 (uri (string-append "http://fallabs.com/tokyocabinet/"
1880 name "-" version ".tar.gz"))
1881 (sha256
1882 (base32
1883 "140zvr0n8kvsl0fbn2qn3f2kh3yynfwnizn4dgbj47m975yg80x0"))))
1884 (build-system gnu-build-system)
1885 (arguments
1886 `(#:configure-flags
1887 (list "--enable-pthread" "--enable-off64" "--enable-fastest"
1888 (string-append "LDFLAGS=-Wl,-rpath="
1889 (assoc-ref %outputs "out") "/lib"))))
1890 (inputs
1891 `(("zlib" ,zlib)))
1892 (home-page "http://fallabs.com/tokyocabinet/")
1893 (synopsis "Tokyo Cabinet is a modern implementation of the DBM database")
1894 (description
1895 "Tokyo Cabinet is a library of routines for managing a database.
1896The database is a simple data file containing records, each is a pair of a
1897key and a value. Every key and value is serial bytes with variable length.
1898Both binary data and character string can be used as a key and a value.
1899There is neither concept of data tables nor data types. Records are
1900organized in hash table, B+ tree, or fixed-length array.")
1901 (license license:lgpl2.1+)))
1902
6242b314
SB
1903(define-public wiredtiger
1904 (package
1905 (name "wiredtiger")
81e95821 1906 (version "2.9.1")
6242b314
SB
1907 (source (origin
1908 (method url-fetch)
1909 (uri (string-append
1910 "http://source.wiredtiger.com/releases/wiredtiger-"
1911 version ".tar.bz2"))
1912 (sha256
1913 (base32
81e95821 1914 "0krwnb2zfbhvjaskwl875qzd3y626s84zcciq2mxr5c5riw3yh6s"))))
6242b314
SB
1915 (build-system gnu-build-system)
1916 (arguments
a469c695 1917 '(#:configure-flags '("--enable-lz4" "--with-builtins=snappy,zlib")
6242b314
SB
1918 #:phases
1919 (modify-phases %standard-phases
1920 (add-before 'check 'disable-test/fops
1921 (lambda _
1922 ;; XXX: timed out after 3600 seconds of silence
1923 (substitute* "Makefile"
1924 (("test/fops") ""))
1925 #t)))))
1926 (inputs
1927 `(("lz4" ,lz4)
3faa422d
CB
1928 ("zlib" ,zlib)
1929 ("snappy" ,snappy)))
6242b314
SB
1930 (home-page "http://source.wiredtiger.com/")
1931 (synopsis "NoSQL data engine")
1932 (description
1933 "WiredTiger is an extensible platform for data management. It supports
1934row-oriented storage (where all columns of a row are stored together),
1935column-oriented storage (where columns are stored in groups, allowing for
1936more efficient access and storage of column subsets) and log-structured merge
1937trees (LSM), for sustained throughput under random insert workloads.")
ba8b9f8d 1938 (license license:gpl3) ; or GPL-2
6242b314 1939 ;; configure.ac: WiredTiger requires a 64-bit build.
092b7b3e 1940 (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))))
90c2ee88 1941
4680fef7
AB
1942(define-public wiredtiger-3
1943 (package
1944 (inherit wiredtiger)
1945 (name "wiredtiger")
1946 (version "3.1.0")
1947 (source (origin
1948 (method url-fetch)
1949 (uri (string-append "http://source.wiredtiger.com/releases/wiredtiger-"
1950 version ".tar.bz2"))
1951 (sha256
1952 (base32
1953 "014awypv579ascg4jbx4pndj2wld337m79yyzrzyr7hxrff139jx"))))))
1954
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KB
1955(define-public guile-wiredtiger
1956 (package
1957 (name "guile-wiredtiger")
b1e6b938 1958 (version "0.7.0")
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KB
1959 (source (origin
1960 (method git-fetch)
1961 (uri (git-reference
1962 (url "https://framagit.org/a-guile-mind/guile-wiredtiger.git")
b1e6b938 1963 (commit "340ad4bc2ff4dcc6216a2f5c6f9172ca320ac66b")))
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KB
1964 (file-name (string-append name "-" version "-checkout"))
1965 (sha256
1966 (base32
b1e6b938 1967 "15j36bvxxzil7qpwlmh1rffqpva3ynvrcpqhhqbj2c9208ayz595"))))
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KB
1968 (build-system gnu-build-system)
1969 (arguments
3926a099 1970 '(#:parallel-tests? #f ;; tests can't be run in parallel, yet.
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KB
1971 #:configure-flags
1972 (list (string-append "--with-libwiredtiger-prefix="
1973 (assoc-ref %build-inputs "wiredtiger")))
189be331 1974 #:make-flags '("GUILE_AUTO_COMPILE=0")))
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KB
1975 (native-inputs
1976 `(("autoconf" ,autoconf)
1977 ("automake" ,automake)
1978 ("pkg-config" ,pkg-config)))
1979 (inputs
b1e6b938 1980 `(("wiredtiger" ,wiredtiger-3)
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KB
1981 ("guile" ,guile-2.2)))
1982 (propagated-inputs
b1e6b938 1983 `(("guile-bytestructures" ,guile-bytestructures)))
3926a099 1984 (synopsis "WiredTiger bindings for GNU Guile")
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KB
1985 (description
1986 "This package provides Guile bindings to the WiredTiger ``NoSQL''
b1e6b938 1987database.")
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KB
1988 (home-page "https://framagit.org/a-guile-mind/guile-wiredtiger")
1989 (license license:gpl3+)))
1990
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1991(define-public perl-db-file
1992 (package
1993 (name "perl-db-file")
a3abc3fd 1994 (version "1.852")
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DM
1995 (source
1996 (origin
1997 (method url-fetch)
1998 (uri (string-append
1999 "mirror://cpan/authors/id/P/PM/PMQS/DB_File-"
2000 version
2001 ".tar.gz"))
2002 (sha256
2003 (base32
a3abc3fd 2004 "14c30xyqx9c1hxw40bqbzls41al8gmklxv5jbk2kknmn4dsrbdrs"))))
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2005 (build-system perl-build-system)
2006 (inputs `(("bdb" ,bdb)))
2007 (native-inputs `(("perl-test-pod" ,perl-test-pod)))
2008 (arguments
2009 `(#:phases (modify-phases %standard-phases
2010 (add-before
2011 'configure 'modify-config.in
2012 (lambda* (#:key inputs #:allow-other-keys)
2013 (substitute* "config.in"
2014 (("/usr/local/BerkeleyDB") (assoc-ref inputs "bdb")))
2015 #t)))))
9aba9b12 2016 (home-page "https://metacpan.org/release/DB_File")
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2017 (synopsis
2018 "Perl5 access to Berkeley DB version 1.x")
2019 (description
2020 "The DB::File module provides Perl bindings to the Berkeley DB version 1.x.")
2f3108ad 2021 (license license:perl-license)))
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DC
2022
2023(define-public lmdb
2024 (package
2025 (name "lmdb")
49158947 2026 (version "0.9.23")
f167b432
TGR
2027 (source
2028 (origin
2029 (method git-fetch)
2030 (uri (git-reference
2031 (url "https://github.com/LMDB/lmdb.git")
2032 (commit (string-append "LMDB_" version))))
2033 (file-name (git-file-name name version))
2034 (sha256
49158947 2035 (base32 "0ag7l5180ajvm73y59m7sn3p52xm8m972d08cshxhpwgwa4v35k6"))))
0e1b262e
DC
2036 (build-system gnu-build-system)
2037 (arguments
2038 `(#:test-target "test"
2039 #:phases
2040 (modify-phases %standard-phases
2041 (replace 'configure
2042 (lambda* (#:key outputs #:allow-other-keys)
f167b432 2043 (chdir "libraries/liblmdb")
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DC
2044 (substitute* "Makefile"
2045 (("/usr/local") (assoc-ref outputs "out")))
2046 #t)))))
2047 (home-page "https://symas.com/products/lightning-memory-mapped-database")
fda852ff
TGR
2048 (synopsis "Lightning Memory-Mapped Database library")
2049 (description
2050 "The @dfn{Lightning Memory-Mapped Database} (LMDB) is a high-performance
2051transactional database. Unlike more complex relational databases, LMDB handles
2052only key-value pairs (stored as arbitrary byte arrays) and relies on the
2053underlying operating system for caching and locking, keeping the code small and
2054simple.
2055The use of ‘zero-copy’ memory-mapped files combines the persistence of classic
2056disk-based databases with high read performance that scales linearly over
2057multiple cores. The size of each database is limited only by the size of the
2058virtual address space — not physical RAM.")
0e1b262e 2059 (license license:openldap2.8)))
fe71eee0
JN
2060
2061(define-public libpqxx
2062 (package
2063 (name "libpqxx")
2064 (version "4.0.1")
2065 (source (origin
2066 (method url-fetch)
2067 (uri (string-append
2068 "http://pqxx.org/download/software/libpqxx/"
2069 name "-" version ".tar.gz"))
2070 (sha256
2071 (base32
2072 "0f6wxspp6rx12fkasanb0z2g2gc8dhcfwnxagx8wwqbpg6ifsz09"))))
2073 (build-system gnu-build-system)
2074 (native-inputs
2075 `(("python" ,python-2)))
2076 (inputs `(("postgresql" ,postgresql)))
2077 (arguments
5ac097e2
MB
2078 `(#:tests? #f ; # FAIL: 1
2079 #:phases
2080 (modify-phases %standard-phases
2081 (add-before 'configure 'fix-sed-command
2082 (lambda _
2083 ;; Newer sed versions error out if double brackets are not used.
2084 (substitute* "configure"
2085 (("\\[:space:\\]") "[[:space:]]"))
2086 #t)))))
fe71eee0
JN
2087 (synopsis "C++ connector for PostgreSQL")
2088 (description
2089 "Libpqxx is a C++ library to enable user programs to communicate with the
2090PostgreSQL database back-end. The database back-end can be local or it may be
2091on another machine, accessed via TCP/IP.")
2092 (home-page "http://pqxx.org/")
2093 (license license:bsd-3)))
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2094
2095(define-public python-peewee
2096 (package
2097 (name "python-peewee")
afd84536 2098 (version "2.10.2")
4d98bfaf
EF
2099 (source
2100 (origin
2101 (method url-fetch)
2102 (uri (pypi-uri "peewee" version))
2103 (sha256
2104 (base32
afd84536 2105 "10f2mrd5hw6rjklrzaix2lsxlgc8vx3xak54arcy6yd791zhchi3"))))
4d98bfaf
EF
2106 (build-system python-build-system)
2107 (arguments
2108 `(#:tests? #f)) ; Fails to import test data
2109 (native-inputs
2110 `(("python-cython" ,python-cython)))
2111 (home-page "https://github.com/coleifer/peewee/")
2112 (synopsis "Small object-relational mapping utility")
2113 (description
2114 "Peewee is a simple and small ORM (object-relation mapping) tool. Peewee
2115handles converting between pythonic values and those used by databases, so you
2116can use Python types in your code without having to worry. It has built-in
2117support for sqlite, mysql and postgresql. If you already have a database, you
2118can autogenerate peewee models using @code{pwiz}, a model generator.")
2119 (license license:expat)))
2120
2121(define-public python2-peewee
2122 (package-with-python2 python-peewee))
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AP
2123
2124(define-public sqlcipher
2125 (package
2126 (name "sqlcipher")
682c2918 2127 (version "3.4.2")
62ea44fc
AP
2128 (source
2129 (origin
2130 (method url-fetch)
2131 (uri (string-append "https://github.com/sqlcipher/" name
2132 "/archive/v" version ".tar.gz"))
2133 (sha256
682c2918 2134 (base32 "1nxarwbci8jx99f1d0y1ivxcv25s78l1p7q6qy28lkpkcx8pm2b9"))
62ea44fc
AP
2135 (file-name (string-append name "-" version ".tar.gz"))))
2136 (build-system gnu-build-system)
2137 (inputs
2138 `(("libcrypto" ,openssl)
2139 ("libtcl8.6" ,tcl))) ; required for running the tests
2140 (native-inputs
2141 `(("tcl" ,tcl)))
2142 (arguments
2143 '(#:configure-flags
2144 '("--enable-tempstore=yes"
2145 "CFLAGS=-DSQLITE_HAS_CODEC -DSQLITE_ENABLE_FTS3"
2146 "LDFLAGS=-lcrypto -ltcl8.6"
2147 "--disable-tcl")
2148 ;; tests cannot be run from the Makefile
2149 ;; see: <https://github.com/sqlcipher/sqlcipher/issues/172>
2150 #:test-target "testfixture"
2151 #:phases
2152 (modify-phases %standard-phases
2153 (add-before 'check 'build-test-runner
2154 (assoc-ref %standard-phases 'check))
2155 (replace 'check
2156 (lambda _
96272e28 2157 (invoke "./testfixture" "test/crypto.test"))))))
62ea44fc
AP
2158 (home-page "https://www.zetetic.net/sqlcipher/")
2159 (synopsis
2160 "Library providing transparent encryption of SQLite database files")
2161 (description "SQLCipher is an implementation of SQLite, extended to
2162provide transparent 256-bit AES encryption of database files. Pages are
2163encrypted before being written to disk and are decrypted when read back. It’s
2164well suited for protecting embedded application databases and for mobile
2165development.")
2166 ;; The source files
2167 ;; src/{crypto.c,crypto_impl.c,crypto.h,crypto_cc.c,crypto_libtomcrypt.c},
2168 ;; src/{crypto_openssl.c,sqlcipher.h}, tool/crypto-speedtest.tcl,
2169 ;; test/crypto.test are licensed under a 3-clause BSD license. All other
2170 ;; source files are in the public domain.
2171 (license (list license:public-domain license:bsd-3))))
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2172
2173(define-public python-pyodbc-c
2174 (package
2175 (name "python-pyodbc-c")
c6b6a74e 2176 (version "3.1.4")
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DM
2177 (source
2178 (origin
2179 (method url-fetch)
2180 (uri (string-append "https://gitlab.com/daym/pyodbc-c/repository/"
2181 "archive.tar.gz?ref=v" version))
2182 (sha256
2183 (base32
c6b6a74e 2184 "05aq2297k779xidmxcwkrrxjvj1bh2q7d9a1rcjv6zr15y764ga9"))
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DM
2185 (file-name (string-append name "-" version ".tar.gz"))))
2186 (build-system python-build-system)
2187 (inputs
2188 `(("unixodbc" ,unixodbc)))
2189 (arguments
2190 `(;; No unit tests exist.
2191 #:tests? #f))
2192 (home-page "https://github.com/mkleehammer/pyodbc")
2193 (synopsis "Python ODBC Library")
2194 (description "@code{python-pyodbc-c} provides a Python DB-API driver
2195for ODBC.")
2196 (license (license:x11-style "file://LICENSE.TXT"))))
2197
2198(define-public python2-pyodbc-c
2199 (package-with-python2 python-pyodbc-c))
d39a84e8 2200
41916bea
DM
2201(define-public python-pyodbc
2202 (package
2203 (name "python-pyodbc")
d5be746a 2204 (version "4.0.27")
41916bea
DM
2205 (source
2206 (origin
2207 (method url-fetch)
2208 (uri (pypi-uri "pyodbc" version))
2209 (sha256
d5be746a 2210 (base32 "1kd2i7hc1330cli72vawzby17c3039cqn1aba4i0zrjnpghjhmib"))
41916bea
DM
2211 (file-name (string-append name "-" version ".tar.gz"))))
2212 (build-system python-build-system)
2213 (inputs
2214 `(("unixodbc" ,unixodbc)))
2215 (arguments
d5be746a 2216 `(#:tests? #f)) ; no unit tests exist
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DM
2217 (home-page "https://github.com/mkleehammer/pyodbc")
2218 (synopsis "Python ODBC Library")
2219 (description "@code{python-pyodbc} provides a Python DB-API driver
2220for ODBC.")
2221 (license (license:x11-style "file:///LICENSE.TXT"))))
2222
2223(define-public python2-pyodbc
2224 (package-with-python2 python-pyodbc))
2225
d39a84e8
AI
2226(define-public mdbtools
2227 (package
2228 (name "mdbtools")
2229 (version "0.7.1")
2230 (source
2231 (origin
f1f1cebd
RW
2232 (method git-fetch)
2233 (uri (git-reference
2234 (url "https://github.com/brianb/mdbtools.git")
2235 (commit version)))
2236 (file-name (git-file-name name version))
d39a84e8
AI
2237 (sha256
2238 (base32
f1f1cebd 2239 "0gwcpp9y09xhs21g7my2fs8ncb8i6ahlyixcx8jd3q97jbzj441l"))))
d39a84e8
AI
2240 (build-system gnu-build-system)
2241 (inputs
2242 `(("glib" ,glib)))
2243 (native-inputs
2244 `(("autoconf" ,autoconf)
2245 ("automake" ,automake)
2246 ("libtool" ,libtool)
2247 ("pkg-config" ,pkg-config)
2248 ("txt2man" ,txt2man)
2249 ("which" ,which)))
d39a84e8
AI
2250 (home-page "http://mdbtools.sourceforge.net/")
2251 (synopsis "Read Microsoft Access databases")
2252 (description "MDB Tools is a set of tools and applications to read the
2253proprietary MDB file format used in Microsoft's Access database package. This
2254includes programs to export schema and data from Microsoft's Access database
2255file format to other databases such as MySQL, Oracle, Sybase, PostgreSQL,
2256etc., and an SQL engine for performing simple SQL queries.")
2257 (license (list license:lgpl2.0
2258 license:gpl2+))))
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TGR
2259
2260(define-public python-lmdb
2261 (package
2262 (name "python-lmdb")
6263202b 2263 (version "0.95")
07041d95
TGR
2264 (source (origin
2265 (method url-fetch)
2266 (uri (pypi-uri "lmdb" version))
2267 (sha256
2268 (base32
6263202b 2269 "0nx9f193gzl33r1lbqhb96h1igya7pz8wmahr8m9x5zgc05hal91"))
07041d95
TGR
2270 (modules '((guix build utils)))
2271 (snippet
2272 ;; Delete bundled lmdb source files.
6cbee49d
MW
2273 '(begin
2274 (for-each delete-file (list "lib/lmdb.h"
2275 "lib/mdb.c"
2276 "lib/midl.c"
2277 "lib/midl.h"))
2278 #t))))
07041d95
TGR
2279 (build-system python-build-system)
2280 (inputs
2281 `(("lmdb" ,lmdb)))
2282 (arguments
2283 `(#:phases
2284 (modify-phases %standard-phases
2285 (add-before 'build 'use-system-lmdb
2286 (lambda* (#:key inputs #:allow-other-keys)
2287 (let ((lmdb (assoc-ref inputs "lmdb")))
2288 (setenv "LMDB_FORCE_SYSTEM" "set")
2289 (setenv "LMDB_INCLUDEDIR" (string-append lmdb "/include"))
2290 (setenv "LMDB_LIBDIR" (string-append lmdb "/lib"))
2291 #t))))
2292 ;; Tests fail with: ‘lmdb.tool: Please specify environment (--env)’.
2293 #:tests? #f))
2294 (home-page "https://github.com/dw/py-lmdb")
2295 (synopsis "Python binding for the ‘Lightning’ database (LMDB)")
2296 (description
2297 "python-lmdb or py-lmdb is a Python binding for the @dfn{Lightning
2298Memory-Mapped Database} (LMDB), a high-performance key-value store.")
2299 (license
2300 (list license:openldap2.8
2301 ;; ‘lib/win32/inttypes.h’ and ‘lib/win32-stdint/stdint.h’ are BSD-3,
2302 ;; but not actually needed on platforms currently supported by Guix.
2303 license:bsd-3))))
2304
2305(define-public python2-lmdb
2306 (package-with-python2 python-lmdb))
da1f7a9e
BW
2307
2308(define-public python-orator
2309 (package
2310 (name "python-orator")
2311 (version "0.9.7")
2312 (source (origin
2313 (method url-fetch)
2314 (uri (pypi-uri "orator" version))
2315 (sha256
2316 (base32
2317 "14r58z64fdp76ixnvmi4lni762b405ynmsx6chr1qihs3yl9zn6c"))))
2318 (build-system python-build-system)
2319 (arguments
2320 `(#:phases
2321 (modify-phases %standard-phases
2322 (add-after 'unpack 'loosen-dependencies
2323 ;; Tests are not actually run since they are not included with the
2324 ;; distributed package, but dependencies are checked.
2325 (lambda _
2326 (substitute* "setup.py"
2327 ((",<.*'") "'")
2328 (("flexmock==0.9.7") "flexmock")
2329 ;; The pytest-mock package is out of date, so we remove minimum
2330 ;; version requirement.
2331 (("pytest-mock.*'") "pytest-mock'"))
2332 #t)))))
2333 (native-inputs
2334 `(("python-pytest-mock" ,python-pytest-mock)
928da609 2335 ("python-pytest" ,python-pytest)
da1f7a9e
BW
2336 ("python-flexmock" ,python-flexmock)))
2337 (propagated-inputs
2338 `(("python-backpack" ,python-backpack)
2339 ("python-blinker" ,python-blinker)
2340 ("python-cleo" ,python-cleo)
2341 ("python-faker" ,python-faker)
2342 ("python-inflection" ,python-inflection)
2343 ("python-lazy-object-proxy" ,python-lazy-object-proxy)
2344 ("python-pendulum" ,python-pendulum)
2345 ("python-pyaml" ,python-pyaml)
2346 ("python-pygments" ,python-pygments)
2347 ("python-simplejson" ,python-simplejson)
2348 ("python-six" ,python-six)
2349 ("python-wrapt" ,python-wrapt)))
2350 (home-page "https://orator-orm.com/")
2351 (synopsis "ActiveRecord ORM for Python")
2352 (description
2353 "Orator provides a simple ActiveRecord-like Object Relational Mapping
2354implementation for Python.")
2355 (license license:expat)
2356 (properties `((python2-variant . ,(delay python2-orator))))))
2357
2358(define-public python2-orator
2359 (package-with-python2 (strip-python2-variant python-orator)))
61ce0998
RJ
2360
2361(define-public virtuoso-ose
2362 (package
2363 (name "virtuoso-ose")
e63da346 2364 (version "7.2.5")
61ce0998
RJ
2365 (source
2366 (origin
2367 (method url-fetch)
2368 (uri (string-append
2369 "https://github.com/openlink/virtuoso-opensource/releases/"
2370 "download/v" version "/virtuoso-opensource-" version ".tar.gz"))
2371 (sha256
e63da346 2372 (base32 "0r1xakclkfi69pzh8z2k16z3x0m49pxp764icj0ad4w4bb97fr42"))))
61ce0998
RJ
2373 (build-system gnu-build-system)
2374 (arguments
6d09a7b5
RJ
2375 `(#:tests? #f ; Tests require a network connection.
2376 ;; TODO: Removing the libsrc/zlib source directory breaks the build.
2377 ;; This indicates that the internal zlib code may still be used.
2378 #:configure-flags '("--without-internal-zlib"
2379 "--with-readline")))
61ce0998 2380 (inputs
95c633e0 2381 `(("openssl" ,openssl-1.0)
6d09a7b5
RJ
2382 ("net-tools" ,net-tools)
2383 ("readline" ,readline)
2384 ("zlib" ,zlib)))
61ce0998
RJ
2385 (home-page "http://vos.openlinksw.com/owiki/wiki/VOS/")
2386 (synopsis "Multi-model database system")
2387 (description "Virtuoso is a scalable cross-platform server that combines
2388relational, graph, and document data management with web application server
2389and web services platform functionality.")
48b68c61
EF
2390 ;; configure: error: ... can only be build on 64bit platforms
2391 (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))
61ce0998 2392 (license license:gpl2)))
74248d22 2393
a8714bf6
RW
2394(define-public python-ccm
2395 (package
2396 (name "python-ccm")
2397 (version "2.1.6")
2398 (source
2399 (origin
2400 (method url-fetch)
2401 (uri (pypi-uri "ccm" version))
2402 (sha256
2403 (base32
2404 "177dfxsmk3k4cih6fh6v8d91bh4nqx7ns6pc07w7m7i3cvdx3c8n"))))
2405 (build-system python-build-system)
2406 (propagated-inputs
2407 `(("python-pyyaml" ,python-pyyaml)
2408 ;; Not listed in setup.py, but used in ccmlib/node.py for full
2409 ;; functionality
2410 ("python-psutil" ,python-psutil)
2411 ("python-six" ,python-six)))
2412 (home-page "https://github.com/pcmanus/ccm")
2413 (synopsis "Cassandra Cluster Manager for Apache Cassandra clusters on
2414localhost")
2415 (description "Cassandra Cluster Manager is a development tool for testing
2416local Cassandra clusters. It creates, launches and removes Cassandra clusters
2417on localhost.")
2418 (license license:asl2.0)))
2419
2420(define-public python2-ccm
2421 (package-with-python2 python-ccm))
2422
2423(define-public python2-pysqlite
2424 (package
2425 (name "python2-pysqlite")
2426 (version "2.8.3")
2427 (source
2428 (origin
2429 (method url-fetch)
2430 (uri (pypi-uri "pysqlite" version))
2431 (sha256
2432 (base32
2433 "1424gwq9sil2ffmnizk60q36vydkv8rxs6m7xs987kz8cdc37lqp"))))
2434 (build-system python-build-system)
2435 (inputs
2436 `(("sqlite" ,sqlite)))
2437 (arguments
2438 `(#:python ,python-2 ; incompatible with Python 3
2439 #:tests? #f)) ; no test target
2440 (home-page "https://github.com/ghaering/pysqlite")
2441 (synopsis "SQLite bindings for Python")
2442 (description
2443 "Pysqlite provides SQLite bindings for Python that comply to the
2444Database API 2.0T.")
2445 (license license:zlib)))
2446
2447(define-public python-sqlalchemy
2448 (package
2449 (name "python-sqlalchemy")
1f2f358b 2450 (version "1.3.3")
a8714bf6
RW
2451 (source
2452 (origin
2453 (method url-fetch)
aeec4a8f 2454 (uri (pypi-uri "SQLAlchemy" version))
a8714bf6 2455 (sha256
1f2f358b 2456 (base32 "06c3lcv7nijsgqsjaaa4djrwlzgh9f910zlqxkmgq22h6jl4rici"))))
a8714bf6
RW
2457 (build-system python-build-system)
2458 (native-inputs
6d04f694 2459 `(("python-cython" ,python-cython) ; for C extensions
a8714bf6 2460 ("python-pytest" ,python-pytest)
6d04f694 2461 ("python-mock" ,python-mock))) ; for tests
a8714bf6
RW
2462 (arguments
2463 `(#:phases
2464 (modify-phases %standard-phases
2465 (replace 'check
9871a896 2466 (lambda _ (invoke "py.test"))))))
5cfe650b 2467 (home-page "https://www.sqlalchemy.org")
a8714bf6
RW
2468 (synopsis "Database abstraction library")
2469 (description
2470 "SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that
2471gives application developers the full power and flexibility of SQL. It
2472provides a full suite of well known enterprise-level persistence patterns,
2473designed for efficient and high-performing database access, adapted into a
2474simple and Pythonic domain language.")
2475 (license license:x11)))
2476
2477(define-public python2-sqlalchemy
2478 (package-with-python2 python-sqlalchemy))
2479
2480(define-public python-sqlalchemy-utils
2481 (package
2482 (name "python-sqlalchemy-utils")
53ae35e4 2483 (version "0.32.21")
a8714bf6
RW
2484 (source
2485 (origin
2486 (method url-fetch)
2487 (uri (pypi-uri "SQLAlchemy-Utils" version))
2488 (sha256
2489 (base32
53ae35e4 2490 "1myn71dn8j74xglyh46f12sh8ywb7j0j732rzwq70kvwwnq32m73"))))
a8714bf6
RW
2491 (build-system python-build-system)
2492 (arguments
2493 '(#:tests? #f)) ; FIXME: Many tests require a running database server.
2494 ;; #:phases
2495 ;; (modify-phases %standard-phases
2496 ;; (replace 'check
2497 ;; (lambda _
2498 ;; (zero? (system* "py.test" "sqlalchemy_utils" "tests")))))
2499 (propagated-inputs
2500 `(("python-six" ,python-six)
2501 ("python-sqlalchemy" ,python-sqlalchemy)))
2502 (native-inputs
2503 `(("python-dateutil" ,python-dateutil)
2504 ("python-flexmock" ,python-flexmock)
2505 ("python-psycopg2" ,python-psycopg2)
2506 ("python-pytest" ,python-pytest)
2507 ("python-pytz" ,python-pytz)))
2508 (home-page "https://github.com/kvesteri/sqlalchemy-utils")
2509 (synopsis "Various utility functions for SQLAlchemy")
2510 (description
2511 "SQLAlchemy-utils provides various utility functions and custom data types
2512for SQLAlchemy. SQLAlchemy is an SQL database abstraction library for Python.
2513
2514You might also want to install the following optional dependencies:
2515@enumerate
2516@item @code{python-passlib}
2517@item @code{python-babel}
2518@item @code{python-cryptography}
2519@item @code{python-pytz}
2520@item @code{python-psycopg2}
2521@item @code{python-furl}
2522@item @code{python-flask-babel}
2523@end enumerate
2524")
2525 (license license:bsd-3)))
2526
2527(define-public python2-sqlalchemy-utils
2528 (package-with-python2 python-sqlalchemy-utils))
2529
2530(define-public python-alembic
2531 (package
2532 (name "python-alembic")
6743080c 2533 (version "1.0.11")
a8714bf6
RW
2534 (source
2535 (origin
2536 (method url-fetch)
2537 (uri (pypi-uri "alembic" version))
2538 (sha256
2539 (base32
6743080c 2540 "1k5hag0vahd5vrf9abx8fdj2whrwaw2iq2yp736mmxnbsn5xkdyd"))))
a8714bf6
RW
2541 (build-system python-build-system)
2542 (native-inputs
2543 `(("python-mock" ,python-mock)
2544 ("python-pytest-cov" ,python-pytest-cov)))
2545 (propagated-inputs
2546 `(("python-dateutil" ,python-dateutil)
2547 ("python-sqlalchemy" ,python-sqlalchemy)
2548 ("python-mako" ,python-mako)
2549 ("python-editor" ,python-editor)))
a7f27da7 2550 (home-page "https://bitbucket.org/zzzeek/alembic")
6743080c 2551 (synopsis "Database migration tool for SQLAlchemy")
a8714bf6
RW
2552 (description
2553 "Alembic is a lightweight database migration tool for usage with the
2554SQLAlchemy Database Toolkit for Python.")
2555 (license license:expat)))
2556
2557(define-public python2-alembic
2558 (package-with-python2 python-alembic))
2559
2560(define-public python-pickleshare
2561 (package
2562 (name "python-pickleshare")
f825faa5 2563 (version "0.7.5")
a8714bf6
RW
2564 (source
2565 (origin
2566 (method url-fetch)
ed519b3c 2567 (uri (pypi-uri "pickleshare" version))
a8714bf6 2568 (sha256
f825faa5 2569 (base32 "1jmghg3c53yp1i8cm6pcrm280ayi8621rwyav9fac7awjr3kss47"))))
a8714bf6 2570 (build-system python-build-system)
ff856cfd
MB
2571 (arguments
2572 `(#:phases (modify-phases %standard-phases
2573 (replace 'check
2574 (lambda _
2575 (invoke "pytest"))))))
2576 (native-inputs
2577 `(("python-pytest" ,python-pytest)))
a8714bf6
RW
2578 (home-page "https://github.com/vivainio/pickleshare")
2579 (synopsis "Tiny key value database with concurrency support")
2580 (description
2581 "PickleShare is a small ‘shelve’-like datastore with concurrency support.
2582Like shelve, a PickleShareDB object acts like a normal dictionary. Unlike
2583shelve, many processes can access the database simultaneously. Changing a
2584value in database is immediately visible to other processes accessing the same
2585database. Concurrency is possible because the values are stored in separate
2586files. Hence the “database” is a directory where all files are governed by
2587PickleShare.")
ed519b3c 2588 (properties `((python2-variant . ,(delay python2-pickleshare))))
a8714bf6
RW
2589 (license license:expat)))
2590
2591(define-public python2-pickleshare
ed519b3c
MB
2592 (let ((pickleshare (package-with-python2
2593 (strip-python2-variant python-pickleshare))))
2594 (package (inherit pickleshare)
2595 (propagated-inputs `(("python2-pathlib2" ,python2-pathlib2)
2596 ,@(package-propagated-inputs pickleshare))))))
a8714bf6
RW
2597
2598(define-public python-apsw
2599 (package
2600 (name "python-apsw")
2dd12924 2601 (version "3.20.1-r1")
a8714bf6
RW
2602 (source
2603 (origin
2604 (method url-fetch)
2dd12924
MB
2605 (uri (string-append "https://github.com/rogerbinns/apsw/archive/"
2606 version ".tar.gz"))
f5c847eb 2607 (file-name (string-append "apsw-" version ".tar.gz"))
a8714bf6
RW
2608 (sha256
2609 (base32
2dd12924 2610 "00ai7m2pqi26qaflhz314d8k5i3syw7xzr145fhfl0crhyh6adz2"))))
a8714bf6
RW
2611 (build-system python-build-system)
2612 (inputs
c553b08b 2613 `(("sqlite" ,sqlite)))
a8714bf6
RW
2614 (arguments
2615 `(#:phases
2616 (modify-phases %standard-phases
2617 (replace 'build
2618 (lambda _
c553b08b
EF
2619 (invoke "python" "setup.py" "build" "--enable-all-extensions")
2620 #t))
a8714bf6
RW
2621 (add-after 'build 'build-test-helper
2622 (lambda _
c553b08b
EF
2623 (invoke "gcc" "-fPIC" "-shared" "-o" "./testextension.sqlext"
2624 "-I." "-Isqlite3" "src/testextension.c")
2625 #t))
a8714bf6
RW
2626 (delete 'check)
2627 (add-after 'install 'check
2628 (lambda* (#:key inputs outputs #:allow-other-keys)
2629 (add-installed-pythonpath inputs outputs)
c553b08b
EF
2630 (invoke "python" "setup.py" "test")
2631 #t)))))
a8714bf6
RW
2632 (home-page "https://github.com/rogerbinns/apsw/")
2633 (synopsis "Another Python SQLite Wrapper")
2634 (description "APSW is a Python wrapper for the SQLite
2635embedded relational database engine. In contrast to other wrappers such as
2636pysqlite it focuses on being a minimal layer over SQLite attempting just to
2637translate the complete SQLite API into Python.")
2638 (license license:zlib)))
2639
2640(define-public python2-apsw
2641 (package-with-python2 python-apsw))
2642
2643(define-public python2-neo4j-driver
2644 (package
2645 (name "python2-neo4j-driver")
2646 ;; NOTE: When upgrading to 1.5.0, please add a python3 variant.
2647 (version "1.4.0")
2648 (source (origin
2649 (method url-fetch)
2650 (uri (pypi-uri "neo4j-driver" version))
2651 (sha256
2652 (base32
2653 "011r1vh182p8mm83d8dz9rfnc3l7rf7fd00cyrbyfzi71jmc4g98"))))
2654 (build-system python-build-system)
2655 (arguments
2656 `(#:python ,python-2))
2657 (home-page "https://neo4j.com/developer/python/")
2658 (synopsis "Neo4j driver code written in Python")
2659 (description "This package provides the Neo4j Python driver that connects
2660to the database using Neo4j's binary protocol. It aims to be minimal, while
2661being idiomatic to Python.")
2662 (license license:asl2.0)))
2663
2664(define-public python2-py2neo
2665 (package
2666 (name "python2-py2neo")
2667 (version "3.1.2")
2668 (source (origin
2669 (method url-fetch)
2670 (uri (pypi-uri "py2neo" version))
2671 (sha256
2672 (base32
2673 "1f1q95vqcvlc3nsc33p841swnjdcjazddlq2dzi3qfnjqjrajxw1"))))
2674 (build-system python-build-system)
2675 (arguments
2676 `(#:python ,python-2))
2677 (home-page "http://py2neo.org")
2678 (synopsis "Library and toolkit for working with Neo4j in Python")
2679 (description "This package provides a client library and toolkit for
2680working with Neo4j from within Python applications and from the command
2681line. The core library has no external dependencies and has been carefully
2682designed to be easy and intuitive to use.")
2683 (license license:asl2.0)))
2684
2685(define-public python-psycopg2
2686 (package
2687 (name "python-psycopg2")
72b7de49 2688 (version "2.7.7")
a8714bf6
RW
2689 (source
2690 (origin
2691 (method url-fetch)
2692 (uri (pypi-uri "psycopg2" version))
2693 (sha256
72b7de49 2694 (base32 "0zjbabb4qjx9dm07imhf8y5a9rpa06d5zah80myiimgdi83nslpl"))))
a8714bf6
RW
2695 (build-system python-build-system)
2696 (arguments
2697 ;; Tests would require a postgresql database "psycopg2_test"
2698 ;; and a running postgresql database management service.
2699 `(#:tests? #f)) ; TODO re-enable after providing a test-db.
2700 (inputs
2701 `(("postgresql" ,postgresql))) ; libpq
2702 (home-page "http://initd.org/psycopg/")
2703 (synopsis "Python PostgreSQL adapter")
2704 (description
19601e89
BW
2705 "psycopg2 is a thread-safe PostgreSQL adapter that implements DB-API
27062.0.")
a8714bf6
RW
2707 (license license:lgpl3+)))
2708
2709(define-public python2-psycopg2
2710 (package-with-python2 python-psycopg2))
2711
2712(define-public python-sadisplay
2713 (package
2714 (name "python-sadisplay")
bcdc5cae 2715 (version "0.4.8")
a8714bf6
RW
2716 (source
2717 (origin
2718 (method url-fetch)
2719 (uri (pypi-uri "sadisplay" version))
2720 (sha256
2721 (base32
bcdc5cae 2722 "01d9lxhmgpb68gy8rd6zj6fcwp84n2qq210n1qsk3qbsir79bzh4"))))
a8714bf6
RW
2723 (build-system python-build-system)
2724 (propagated-inputs
2725 `(("python-sqlalchemy" ,python-sqlalchemy)))
2726 (native-inputs
bcdc5cae 2727 ;; For tests.
a8714bf6
RW
2728 `(("python-nose" ,python-nose)))
2729 (home-page "https://bitbucket.org/estin/sadisplay")
2730 (synopsis "SQLAlchemy schema displayer")
2731 (description "This package provides a program to build Entity
2732Relationship diagrams from a SQLAlchemy model (or directly from the
2733database).")
2734 (license license:bsd-3)))
2735
2736(define-public python2-sadisplay
2737 (package-with-python2 python-sadisplay))
2738
2739(define-public python-mysqlclient
2740 (package
2741 (name "python-mysqlclient")
28635e52 2742 (version "1.3.13")
a8714bf6
RW
2743 (source
2744 (origin
2745 (method url-fetch)
2746 (uri (pypi-uri "mysqlclient" version))
2747 (sha256
2748 (base32
28635e52 2749 "0kv4a1icwdav8jpl7qvnr931lw5h3v22ids6lwq6qpi1hjzf33pz"))))
a8714bf6
RW
2750 (build-system python-build-system)
2751 (native-inputs
f94051e6 2752 `(("nose" ,python-nose)
a8714bf6
RW
2753 ("mock" ,python-mock)
2754 ("py.test" ,python-pytest)))
2755 (inputs
2b8491fb
JL
2756 `(("mysql" ,mariadb "lib")
2757 ("mysql-dev" ,mariadb "dev")
a8714bf6
RW
2758 ("libz" ,zlib)
2759 ("openssl" ,openssl)))
2760 (home-page "https://github.com/PyMySQL/mysqlclient-python")
2761 (synopsis "MySQLdb is an interface to the popular MySQL database server for Python")
2762 (description "MySQLdb is an interface to the popular MySQL database server
2763for Python. The design goals are:
2764@enumerate
2765@item Compliance with Python database API version 2.0 [PEP-0249],
2766@item Thread-safety,
2767@item Thread-friendliness (threads will not block each other).
2768@end enumerate")
2769 (license license:gpl2)))
2770
2771(define-public python2-mysqlclient
2772 (package-with-python2 python-mysqlclient))
2773
2774(define-public python-hiredis
2775 (package
2776 (name "python-hiredis")
2777 (version "0.2.0")
2778 (source
2779 (origin
2780 (method url-fetch)
2781 (uri (pypi-uri "hiredis" version))
2782 (sha256
2783 (base32
2784 "1dfm2k9l9zar9nw9fwmm74zrgraxdxs04vx9li56fjcf289qx5fa"))))
2785 (build-system python-build-system)
2786 (arguments
2787 ;; no tests
2788 `(#:tests? #f))
2789 (home-page "https://github.com/redis/hiredis-py")
2790 (synopsis "Python extension that wraps protocol parsing code in hiredis")
2791 (description "Python-hiredis is a python extension that wraps protocol
2792parsing code in hiredis. It primarily speeds up parsing of multi bulk replies.")
2793 (license license:bsd-3)))
2794
2795(define-public python2-hiredis
2796 (package-with-python2 python-hiredis))
2797
2798(define-public python-fakeredis
2799 (package
2800 (name "python-fakeredis")
2801 (version "0.8.2")
2802 (source
2803 (origin
2804 (method url-fetch)
2805 (uri (pypi-uri "fakeredis" version))
2806 (sha256
2807 (base32
2808 "0zncahj3byyasyfx9i7k991ph0n0lq8v3a21pqri5qxn9564bk9r"))))
2809 (build-system python-build-system)
2810 (arguments
2811 ;; no tests
2812 `(#:tests? #f))
2813 (home-page "https://github.com/jamesls/fakeredis")
2814 (synopsis "Fake implementation of redis API for testing purposes")
a4764ff0
TGR
2815 (description
2816 "Fakeredis is a pure-Python implementation of the redis-py Python client
2817that simulates talking to a redis server. It was created for a single purpose:
2818to write unit tests.
2819
2820Setting up redis is not hard, but one often wants to write unit tests that don't
2821talk to an external server such as redis. This module can be used as a
2822reasonable substitute.")
a8714bf6
RW
2823 (license license:bsd-3)))
2824
2825(define-public python2-fakeredis
2826 (package-with-python2 python-fakeredis))
2827
2828(define-public python-redis
2829 (package
2830 (name "python-redis")
23503abb 2831 (version "3.3.8")
a8714bf6
RW
2832 (source
2833 (origin
2834 (method url-fetch)
2835 (uri (pypi-uri "redis" version))
2836 (sha256
23503abb 2837 (base32 "0fyxzqax7lcwzwhvnz0i0q6v62hxyv1mv52ywx3bpff9a2vjz8lq"))))
a8714bf6 2838 (build-system python-build-system)
a263a976 2839 ;; Tests require a running Redis server.
a8714bf6
RW
2840 (arguments '(#:tests? #f))
2841 ;; As long as we are not running test, we do not need this input :-)
2842 ;;(native-inputs
2843 ;; `(("python-pytest" ,python-pytest)))
2844 (home-page "https://github.com/andymccurdy/redis-py")
2845 (synopsis "Redis Python client")
2846 (description
2847 "This package provides a Python interface to the Redis key-value store.")
2848 (license license:expat)))
2849
2850(define-public python2-redis
2851 (package-with-python2 python-redis))
2852
2853(define-public python-rq
2854 (package
2855 (name "python-rq")
865c76ea 2856 (version "0.13.0")
a8714bf6
RW
2857 (source
2858 (origin
2859 (method url-fetch)
2860 (uri (pypi-uri "rq" version))
2861 (sha256
865c76ea 2862 (base32 "0xvapd2bxnyq480i48bdkddzlqmv2axbsq85rlfy8k3al8zxxxrf"))))
a8714bf6
RW
2863 (build-system python-build-system)
2864 (propagated-inputs
2865 `(("python-click" ,python-click)
2866 ("python-redis" ,python-redis)))
2867 (home-page "http://python-rq.org/")
2868 (synopsis "Simple job queues for Python")
2869 (description
2870 "RQ (Redis Queue) is a simple Python library for queueing jobs and
2871processing them in the background with workers. It is backed by Redis and it
2872is designed to have a low barrier to entry.")
2873 (license license:bsd-2)))
2874
2875(define-public python2-rq
2876 (package-with-python2 python-rq))
2877
2878(define-public python-trollius-redis
2879 (package
2880 (name "python-trollius-redis")
2881 (version "0.1.4")
2882 (source
2883 (origin
2884 (method url-fetch)
2885 (uri (pypi-uri "trollius_redis" version))
2886 (sha256
2887 (base32
2888 "0k3vypszmgmaipgw9xscvgm79h2zd6p6ci8gdp5sxl6g5kbqr9fy"))))
2889 (build-system python-build-system)
2890 ;; TODO: Tests require packaging 'hiredis'.
2891 (arguments '(#:tests? #f))
2892 (home-page "https://github.com/benjolitz/trollius-redis")
2893 (synopsis "Port of asyncio-redis to trollius")
2894 (description "@code{trollius-redis} is a Redis client for Python
d087a3a6 2895 trollius. It is an asynchronous IO (PEP 3156) implementation of the
a8714bf6
RW
2896 Redis protocol.")
2897 (license license:bsd-2)))
2898
2899(define-public python2-trollius-redis
2900 (package-with-python2 python-trollius-redis))
2901
2902(define-public python-sqlparse
2903 (package
2904 (name "python-sqlparse")
2905 (version "0.2.4")
2906 (source (origin
2907 (method url-fetch)
2908 (uri (pypi-uri "sqlparse" version))
2909 (sha256
2910 (base32
2911 "1v3xh0bkfhb262dbndgzhivpnhdwavdzz8jjhx9vx0xbrx2880nf"))))
2912 (build-system python-build-system)
2913 (arguments
2914 `(#:phases
2915 (modify-phases %standard-phases
2916 (replace 'check
96272e28 2917 (lambda _ (invoke "py.test"))))))
a8714bf6
RW
2918 (native-inputs
2919 `(("python-pytest" ,python-pytest)))
2920 (home-page "https://github.com/andialbrecht/sqlparse")
2921 (synopsis "Non-validating SQL parser")
2922 (description "Sqlparse is a non-validating SQL parser for Python. It
2923provides support for parsing, splitting and formatting SQL statements.")
2924 (license license:bsd-3)))
2925
2926(define-public python2-sqlparse
2927 (package-with-python2 python-sqlparse))
2928
2929(define-public python-sql
2930 (package
2931 (name "python-sql")
909404b5 2932 (version "1.0.0")
a8714bf6
RW
2933 (source
2934 (origin
2935 (method url-fetch)
2936 (uri (pypi-uri "python-sql" version))
2937 (sha256
909404b5 2938 (base32 "05ni936y0ia9xmryl7mlhbj9i80nnvq1bi4zxhb96rv7yvpb3fqb"))))
a8714bf6
RW
2939 (build-system python-build-system)
2940 (home-page "https://python-sql.tryton.org/")
2941 (synopsis "Library to write SQL queries in a pythonic way")
2942 (description "@code{python-sql} is a library to write SQL queries, that
2943transforms idiomatic python function calls to well-formed SQL queries.")
2944 (license license:bsd-3)))
2945
2946(define-public python2-sql
2947 (package-with-python2 python-sql))
33c88fcb
CB
2948
2949(define-public mongo-tools
2950 (package
2951 (name "mongo-tools")
2952 (version "3.4.0")
2953 (source
2954 (origin (method git-fetch)
2955 (uri (git-reference
2956 (url "https://github.com/mongodb/mongo-tools")
2957 (commit (string-append "r" version))))
2958 (file-name (git-file-name name version))
2959 (sha256
2960 (base32
9b32bf6e 2961 "1bcsz5cvj39a7nsxsfqmz9igrw33j6yli9kffigqyscs52amw7x1"))))
33c88fcb
CB
2962 (build-system go-build-system)
2963 (arguments
9b32bf6e
CB
2964 `(#:import-path "github.com/mongodb/mongo-tools"
2965 #:modules ((srfi srfi-1)
2966 (guix build go-build-system)
2967 (guix build utils))
e3900a4d 2968 #:install-source? #f
33c88fcb 2969 #:phases
9b32bf6e
CB
2970 (let ((all-tools
2971 '("bsondump" "mongodump" "mongoexport" "mongofiles"
2972 "mongoimport" "mongooplog" "mongorestore"
2973 "mongostat" "mongotop")))
2974 (modify-phases %standard-phases
2975 (add-after 'unpack 'delete-bundled-source-code
2976 (lambda _
2977 (delete-file-recursively
2978 "src/github.com/mongodb/mongo-tools/vendor")
2979 #t))
fe596965
CB
2980 (add-after 'delete-bundled-source-code 'patch-source
2981 (lambda _
2982 ;; Remove a redundant argument that causes compilation to fail.
2983 (substitute*
2984 "src/github.com/mongodb/mongo-tools/mongorestore/filepath.go"
2985 (("skipping restore of system.profile collection\", db)")
2986 "skipping restore of system.profile collection\")"))
2987 #t))
9b32bf6e
CB
2988 (replace 'build
2989 (lambda _
96272e28
MW
2990 (for-each (lambda (tool)
2991 (let ((command
2992 `("go" "build"
2993 ;; This is where the tests expect to find the
2994 ;; executables
2995 "-o" ,(string-append
2996 "src/github.com/mongodb/mongo-tools/bin/"
2997 tool)
2998 "-v"
2999 "-tags=\"ssl sasl\""
3000 "-ldflags"
3001 "-extldflags=-Wl,-z,now,-z,relro"
3002 ,(string-append
3003 "src/github.com/mongodb/mongo-tools/"
3004 tool "/main/" tool ".go"))))
3005 (simple-format #t "build: running ~A\n"
3006 (string-join command))
3007 (apply invoke command)))
3008 all-tools)
3009 #t))
9b32bf6e
CB
3010 (replace 'check
3011 (lambda _
3012 (with-directory-excursion "src"
96272e28
MW
3013 (for-each (lambda (tool)
3014 (invoke
3015 "go" "test" "-v"
3016 (string-append "github.com/mongodb/mongo-tools/"
3017 tool)))
3018 all-tools))
3019 #t))
9b32bf6e
CB
3020 (replace 'install
3021 (lambda* (#:key outputs #:allow-other-keys)
3022 (for-each (lambda (tool)
3023 (install-file
96272e28
MW
3024 (string-append "src/github.com/mongodb/mongo-tools/bin/"
3025 tool)
9b32bf6e
CB
3026 (string-append (assoc-ref outputs "out")
3027 "/bin")))
96272e28
MW
3028 all-tools)
3029 #t))))))
33c88fcb
CB
3030 (native-inputs
3031 `(("go-github.com-howeyc-gopass" ,go-github.com-howeyc-gopass)
3032 ("go-github.com-jessevdk-go-flags" ,go-github.com-jessevdk-go-flags)
561d391b 3033 ("go-golang-org-x-crypto" ,go-golang-org-x-crypto)
33c88fcb
CB
3034 ("go-gopkg.in-mgo.v2" ,go-gopkg.in-mgo.v2)
3035 ("go-gopkg.in-tomb.v2" ,go-gopkg.in-tomb.v2)
9b32bf6e
CB
3036 ("go-github.com-nsf-termbox-go" ,go-github.com-nsf-termbox-go)
3037 ("go-github.com-smartystreets-goconvey" ,go-github.com-smartystreets-goconvey)))
33c88fcb
CB
3038 (home-page "https://github.com/mongodb/mongo-tools")
3039 (synopsis "Various tools for interacting with MongoDB and BSON")
3040 (description
3041 "This package includes a collection of tools related to MongoDB.
3042@table @code
3043@item bsondump
3044Display BSON files in a human-readable format
3045@item mongoimport
3046Convert data from JSON, TSV or CSV and insert them into a collection
3047@item mongoexport
3048Write an existing collection to CSV or JSON format
3049@item mongodump/mongorestore
3050Dump MongoDB backups to disk in the BSON format
3051@item mongorestore
3052Read MongoDB backups in the BSON format, and restore them to a live database
3053@item mongostat
3054Monitor live MongoDB servers, replica sets, or sharded clusters
3055@item mongofiles
3056Read, write, delete, or update files in GridFS
3057@item mongooplog
3058Replay oplog entries between MongoDB servers
3059@item mongotop
3060Monitor read/write activity on a mongo server
3061@end table")
3062 (license license:asl2.0)))
dae7661a
LF
3063
3064(define-public apache-arrow
3065 (package
3066 (name "apache-arrow")
e58d3a59 3067 (version "0.10.0")
dae7661a
LF
3068 (source
3069 (origin
3070 (method git-fetch)
3071 (uri (git-reference
3072 (url "https://github.com/apache/arrow")
3073 (commit (string-append "apache-arrow-" version))))
3074 (file-name (git-file-name name version))
3075 (sha256
e58d3a59
RW
3076 (base32
3077 "04xkp922b8qrrnpvv9ixxnvk7151n1plzx6aqdff6frn9651zvxs"))))
dae7661a
LF
3078 (build-system cmake-build-system)
3079 (arguments
3080 `(#:tests? #f
3081 #:phases
3082 (modify-phases %standard-phases
3083 (add-before 'configure 'enter-source-directory
3084 (lambda _ (chdir "cpp") #t))
3085 (add-after 'unpack 'set-env
3086 (lambda _
3087 (setenv "BOOST_ROOT" (assoc-ref %build-inputs "boost"))
3088 (setenv "BROTLI_HOME" (assoc-ref %build-inputs "brotli"))
3089 (setenv "FLATBUFFERS_HOME" (assoc-ref %build-inputs "flatbuffers"))
3090 (setenv "JEMALLOC_HOME" (assoc-ref %build-inputs "jemalloc"))
3091 (setenv "RAPIDJSON_HOME" (assoc-ref %build-inputs "rapidjson"))
3092 #t)))
3def739d 3093 #:build-type "Release"
dae7661a 3094 #:configure-flags
3def739d 3095 (list "-DARROW_PYTHON=ON"
dae7661a
LF
3096
3097 ;; Install to PREFIX/lib (the default is
3098 ;; PREFIX/lib64).
3099 (string-append "-DCMAKE_INSTALL_LIBDIR="
3100 (assoc-ref %outputs "out")
3101 "/lib")
3102
3103 ;; XXX These Guix package offer static
3104 ;; libraries that are not position independent,
3105 ;; and ld fails to link them into the arrow .so
3106 "-DARROW_WITH_SNAPPY=OFF"
3107 "-DARROW_WITH_ZLIB=OFF"
3108 "-DARROW_WITH_ZSTD=OFF"
3109 "-DARROW_WITH_LZ4=OFF"
3110
3111 ;; Building the tests forces on all the
3112 ;; optional features and the use of static
3113 ;; libraries.
3114 "-DARROW_BUILD_TESTS=OFF"
3115 "-DARROW_BUILD_STATIC=OFF")))
3116 (inputs
3117 `(("boost" ,boost)
3118 ("rapidjson" ,rapidjson)
3119 ("brotli" ,google-brotli)
3120 ("flatbuffers" ,flatbuffers)
e58d3a59 3121 ("jemalloc" ,jemalloc)
dae7661a
LF
3122 ("python-3" ,python)
3123 ("python-numpy" ,python-numpy)))
3124 (home-page "https://arrow.apache.org/")
3125 (synopsis "Columnar in-memory analytics")
3126 (description "Apache Arrow is a columnar in-memory analytics layer
3127designed to accelerate big data. It houses a set of canonical in-memory
3128representations of flat and hierarchical data along with multiple
3129language-bindings for structure manipulation. It also provides IPC and common
3130algorithm implementations.")
3131 (license license:asl2.0)))
5e5ac710
LF
3132
3133(define-public python-pyarrow
3134 (package
3135 (name "python-pyarrow")
0fa926c2 3136 (version "0.10.0")
5e5ac710
LF
3137 (source
3138 (origin
3139 (method git-fetch)
3140 (uri (git-reference
3141 (url "https://github.com/apache/arrow")
3142 (commit (string-append "apache-arrow-" version))))
3143 (file-name (git-file-name name version))
3144 (sha256
0fa926c2
RW
3145 (base32
3146 "04xkp922b8qrrnpvv9ixxnvk7151n1plzx6aqdff6frn9651zvxs"))))
5e5ac710
LF
3147 (build-system python-build-system)
3148 (arguments
0fa926c2 3149 '(#:tests? #f ; XXX There are no tests in the "python" directory
5e5ac710
LF
3150 #:phases
3151 (modify-phases %standard-phases
0fa926c2 3152 (delete 'build) ; XXX the build is performed again during the install phase
5e5ac710
LF
3153 (add-after 'unpack 'enter-source-directory
3154 (lambda _ (chdir "python") #t))
3155 (add-after 'unpack 'set-env
3156 (lambda _
3157 (setenv "ARROW_HOME" (assoc-ref %build-inputs "apache-arrow"))
3158 #t)))))
3159 (propagated-inputs
3160 `(("apache-arrow" ,apache-arrow)
3161 ("python-numpy" ,python-numpy)
3162 ("python-pandas" ,python-pandas)
3163 ("python-six" ,python-six)))
3164 (native-inputs
c69959f0 3165 `(("cmake" ,cmake-minimal)
5e5ac710
LF
3166 ("python-cython" ,python-cython)
3167 ("python-pytest" ,python-pytest)
0fa926c2 3168 ("python-pytest-runner" ,python-pytest-runner)
5e5ac710
LF
3169 ("python-setuptools-scm" ,python-setuptools-scm)))
3170 (home-page "https://arrow.apache.org/docs/python/")
3171 (synopsis "Python bindings for Apache Arrow")
3172 (description "This library provides a Pythonic API wrapper for the reference
3173Arrow C++ implementation, along with tools for interoperability with pandas,
3174NumPy, and other traditional Python scientific computing packages.")
3175 (license license:asl2.0)))
3176
3177(define-public python2-pyarrow
3178 (package-with-python2 python-pyarrow))
450d5dc2
PL
3179
3180(define-public python-crate
3181 (package
3182 (name "python-crate")
19181820 3183 (version "0.23.2")
450d5dc2
PL
3184 (source (origin
3185 (method url-fetch)
3186 (uri (pypi-uri "crate" version))
3187 (sha256
3188 (base32
19181820 3189 "0ngmlvi320c5gsxab0s7qgq0ck4jdlcwvb6lbjhnfprafdp56vvx"))))
450d5dc2
PL
3190 (build-system python-build-system)
3191 (propagated-inputs
3192 `(("python-urllib3" ,python-urllib3)))
3193 (home-page "https://github.com/crate/crate-python")
3194 (synopsis "CrateDB Python client")
3195 (description
3196 "This package provides a Python client library for CrateDB.
3197It implements the Python DB API 2.0 specification and includes support for
3198SQLAlchemy.")
3199 (license license:asl2.0)))
ae8a0184
GLV
3200
3201(define-public libdbi
3202 (package
3203 (name "libdbi")
3204 (version "0.9.0")
3205 (source (origin
3206 (method url-fetch)
3207 (uri (string-append "mirror://sourceforge/libdbi/libdbi/libdbi-"
3208 version "/libdbi-" version ".tar.gz"))
3209 (sha256
3210 (base32
3211 "00s5ra7hdlq25iv23nwf4h1v3kmbiyzx0v9bhggjiii4lpf6ryys"))))
3212 (build-system gnu-build-system)
3213 (synopsis "Database independent abstraction layer in C")
3214 (description
3215 "This library implements a database independent abstraction layer in C,
3216similar to the DBI/DBD layer in Perl. Writing one generic set of code,
3217programmers can leverage the power of multiple databases and multiple
3218simultaneous database connections by using this framework.")
3219 (home-page "http://libdbi.sourceforge.net/")
3220 (license license:lgpl2.1+)))
df81de86
GLV
3221
3222(define-public libdbi-drivers
3223 (package
3224 (name "libdbi-drivers")
3225 (version "0.9.0")
3226 (source (origin
3227 (method url-fetch)
3228 (uri (string-append "mirror://sourceforge/libdbi-drivers/"
3229 "libdbi-drivers/libdbi-drivers-" version
3230 "/libdbi-drivers-" version ".tar.gz"))
3231 (sha256
3232 (base32
3233 "0m680h8cc4428xin4p733azysamzgzcmv4psjvraykrsaz6ymlj3"))))
3234 (build-system gnu-build-system)
3235 (native-inputs
3236 `(("inetutils" ,inetutils)
3237 ("glibc-locales" ,glibc-locales)))
3238 (inputs
3239 `(("libdbi" ,libdbi)
3240 ("mysql" ,mariadb)
3241 ("postgresql" ,postgresql)
3242 ("sqlite" ,sqlite)))
3243 (arguments
3244 `(#:configure-flags
3245 (let ((libdbi (assoc-ref %build-inputs "libdbi"))
3246 (mysql (assoc-ref %build-inputs "mysql"))
3247 (postgresql (assoc-ref %build-inputs "postgresql"))
3248 (sqlite (assoc-ref %build-inputs "sqlite")))
3249 (list "--disable-docs"
3250 (string-append "--with-dbi-incdir=" libdbi "/include")
3251 (string-append "--with-dbi-libdir=" libdbi "/lib")
3252 "--with-mysql"
3253 (string-append "--with-mysql-incdir=" mysql "/include/mysql")
3254 (string-append "--with-mysql-libdir=" mysql "/lib")
3255 "--with-pgsql"
3256 (string-append "--with-pgsql-incdir=" postgresql "/include")
3257 (string-append "--with-pgsql-libdir=" postgresql "/lib")
3258 "--with-sqlite3"
3259 (string-append "--with-sqlite-incdir=" sqlite "/include")
3260 (string-append "--with-sqlite-libdir=" sqlite "/lib")))
3261 #:phases
3262 (modify-phases %standard-phases
3263 (add-after 'unpack 'fix-tests
3264 (lambda* (#:key inputs #:allow-other-keys)
3265 (substitute* "tests/test_mysql.sh"
3266 (("^MYMYSQLD=.*")
3267 (string-append "MYMYSQLD="
3268 (assoc-ref inputs "mysql")
3269 "/bin/mysqld")))
3270 #t))
3271 (add-after 'install 'remove-empty-directories
3272 (lambda* (#:key outputs #:allow-other-keys)
3273 (let ((var (string-append (assoc-ref outputs "out") "/var")))
3274 (delete-file-recursively var))
3275 #t)))))
3276 (synopsis "Database drivers for the libdbi framework")
3277 (description
3278 "The @code{libdbi-drivers} library provides the database specific drivers
3279for the @code{libdbi} framework.
3280
3281The drivers officially supported by @code{libdbi} are:
3282@itemize
3283@item MySQL,
3284@item PostgreSQL,
3285@item SQLite.
3286@end itemize")
3287 (home-page "http://libdbi-drivers.sourceforge.net/")
3288 (license license:lgpl2.1+)))