gnu: Remove python2-babel@2.6.
[jackhill/guix/guix.git] / gnu / packages / databases.scm
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5f96f303 1;;; GNU Guix --- Functional package management for GNU
189be331 2;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2018 Ludovic Courtès <ludo@gnu.org>
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3;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr>
4;;; Copyright © 2013, 2017 Cyril Roelandt <tipecaml@gmail.com>
218a2106 5;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org>
b9ed5ef3 6;;; Copyright © 2014, 2015, 2016, 2018 Mark H Weaver <mhw@netris.org>
a8714bf6 7;;; Copyright © 2014, 2015 Eric Bavier <bavier@member.fsf.org>
da1f7a9e 8;;; Copyright © 2015, 2016 Sou Bunnbu <iyzsong@gmail.com>
b747a9db 9;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
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10;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
11;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
12;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org>
9930beb8 13;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
3c986a7d 14;;; Copyright © 2016, 2017 Nikita <nikita@n0.is>
6d09a7b5 15;;; Copyright © 2016, 2017, 2018 Roel Janssen <roel@gnu.org>
0e1b262e 16;;; Copyright © 2016 David Craven <david@craven.ch>
fe71eee0 17;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
62ea44fc 18;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca>
a8714bf6 19;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org>
51d42caa 20;;; Copyright © 2016, 2017, 2018, 2019, 2020 Marius Bakke <mbakke@fastmail.com>
c336567d 21;;; Copyright © 2017, 2018 Julien Lepiller <julien@lepiller.eu>
7dc0f1d5 22;;; Copyright © 2017, 2020 Thomas Danckaert <post@thomasdanckaert.be>
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23;;; Copyright © 2017 Jelle Licht <jlicht@fsfe.org>
24;;; Copyright © 2017 Adriano Peluso <catonano@gmail.com>
d39a84e8 25;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
a8fa39cd 26;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
38abef12 27;;; Copyright © 2017, 2018 Alex Vong <alexvong1995@gmail.com>
19601e89 28;;; Copyright © 2017, 2018 Ben Woodcroft <donttrustben@gmail.com>
231123ee 29;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
7bcc3405 30;;; Copyright © 2017, 2018 Pierre Langlois <pierre.langlois@gmx.com>
e58d3a59 31;;; Copyright © 2015, 2017, 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
16973071 32;;; Copyright © 2017 Kristofer Buffington <kristoferbuffington@gmail.com>
3926a099 33;;; Copyright © 2018 Amirouche Boubekki <amirouche@hypermove.net>
dae7661a 34;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
da602679 35;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com>
9df78675 36;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us>
a3abc3fd 37;;; Copyright © 2019 Alex Griffin <a@ajgrf.com>
91477def 38;;; Copyright © 2019 Gábor Boskovits <boskovits@gmail.com>
450d5dc2 39;;; Copyright © 2019 Pierre Langlois <pierre.langlois@gmx.com>
ae8a0184 40;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
2072bc08 41;;; Copyright © 2020 Pierre Neidhardt <mail@ambrevar.xyz>
659bc436 42;;; Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
1655e7be 43;;; Copyright © 2020 Tanguy Le Carrour <tanguy@bioneland.org>
ba0b249d 44;;; Copyright © 2020 Lars-Dominik Braun <ldb@leibniz-psychology.org>
8de54c63 45;;; Copyright © 2020 Guy Fleury Iteriteka <gfleury@disroot.org>
d343e0fe 46;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
945ec6c3 47;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
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48;;;
49;;; This file is part of GNU Guix.
50;;;
51;;; GNU Guix is free software; you can redistribute it and/or modify it
52;;; under the terms of the GNU General Public License as published by
53;;; the Free Software Foundation; either version 3 of the License, or (at
54;;; your option) any later version.
55;;;
56;;; GNU Guix is distributed in the hope that it will be useful, but
57;;; WITHOUT ANY WARRANTY; without even the implied warranty of
58;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
59;;; GNU General Public License for more details.
60;;;
61;;; You should have received a copy of the GNU General Public License
62;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
63
64(define-module (gnu packages databases)
65 #:use-module (gnu packages)
58071723 66 #:use-module (gnu packages admin)
06a035db 67 #:use-module (gnu packages algebra)
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68 #:use-module (gnu packages autotools)
69 #:use-module (gnu packages avahi)
77e52190 70 #:use-module (gnu packages base)
b747a9db 71 #:use-module (gnu packages bash)
06a035db 72 #:use-module (gnu packages bison)
23bbd7dd 73 #:use-module (gnu packages boost)
06a035db 74 #:use-module (gnu packages check)
dae7661a 75 #:use-module (gnu packages cmake)
06a035db 76 #:use-module (gnu packages compression)
62ea44fc 77 #:use-module (gnu packages crypto)
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78 #:use-module (gnu packages curl)
79 #:use-module (gnu packages cyrus-sasl)
255d1bbe 80 #:use-module (gnu packages dbm)
06a035db 81 #:use-module (gnu packages emacs)
da602679 82 #:use-module (gnu packages flex)
2fa55c72 83 #:use-module (gnu packages gcc)
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84 #:use-module (gnu packages gettext)
85 #:use-module (gnu packages glib)
06a035db 86 #:use-module (gnu packages gnupg)
16973071 87 #:use-module (gnu packages guile)
da1f7a9e 88 #:use-module (gnu packages time)
33c88fcb 89 #:use-module (gnu packages golang)
3f8158d6 90 #:use-module (gnu packages icu4c)
06a035db 91 #:use-module (gnu packages jemalloc)
708155df 92 #:use-module (gnu packages language)
3f8158d6 93 #:use-module (gnu packages libedit)
686144e9 94 #:use-module (gnu packages libevent)
5f96f303 95 #:use-module (gnu packages linux)
a50628bb 96 #:use-module (gnu packages logging)
d39a84e8 97 #:use-module (gnu packages man)
a50628bb 98 #:use-module (gnu packages maths)
3f8158d6 99 #:use-module (gnu packages multiprecision)
5f96f303 100 #:use-module (gnu packages ncurses)
aace6f6d 101 #:use-module (gnu packages onc-rpc)
d3c6ad0a 102 #:use-module (gnu packages parallel)
77631745 103 #:use-module (gnu packages pcre)
06a035db 104 #:use-module (gnu packages perl)
5ccde207 105 #:use-module (gnu packages perl-check)
cabe8f18 106 #:use-module (gnu packages perl-web)
4c6aa73b 107 #:use-module (gnu packages pkg-config)
d3c6ad0a 108 #:use-module (gnu packages popt)
a50628bb 109 #:use-module (gnu packages protobuf)
06a035db 110 #:use-module (gnu packages python)
9763102b 111 #:use-module (gnu packages python-crypto)
450d5dc2 112 #:use-module (gnu packages python-web)
312ec128 113 #:use-module (gnu packages python-science)
44d10b1f 114 #:use-module (gnu packages python-xyz)
4c6aa73b 115 #:use-module (gnu packages rdf)
06a035db 116 #:use-module (gnu packages readline)
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117 #:use-module (gnu packages regex)
118 #:use-module (gnu packages rpc)
afcbb020 119 #:use-module (gnu packages ruby)
6bbbca90 120 #:use-module (gnu packages serialization)
9d0c291e 121 #:use-module (gnu packages sphinx)
cd0322a3 122 #:use-module (gnu packages sqlite)
06a035db 123 #:use-module (gnu packages tcl)
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124 #:use-module (gnu packages terminals)
125 #:use-module (gnu packages textutils)
06a035db 126 #:use-module (gnu packages tls)
6bbbca90 127 #:use-module (gnu packages valgrind)
dae7661a 128 #:use-module (gnu packages web)
77631745 129 #:use-module (gnu packages xml)
0e1b262e 130 #:use-module ((guix licenses) #:prefix license:)
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131 #:use-module (guix packages)
132 #:use-module (guix download)
da602679 133 #:use-module (guix bzr-download)
16973071 134 #:use-module (guix git-download)
945ec6c3 135 #:use-module (guix hg-download)
9df78675 136 #:use-module (guix build-system emacs)
5f96f303 137 #:use-module (guix build-system gnu)
58071723 138 #:use-module (guix build-system go)
274da61d 139 #:use-module (guix build-system perl)
4d98bfaf 140 #:use-module (guix build-system python)
afcbb020 141 #:use-module (guix build-system ruby)
77631745 142 #:use-module (guix build-system cmake)
6e385b76 143 #:use-module (guix build-system scons)
9077cf68 144 #:use-module (guix build-system trivial)
329d13b8 145 #:use-module (guix utils)
29cfbfca 146 #:use-module (srfi srfi-1)
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147 #:use-module (srfi srfi-26)
148 #:use-module (ice-9 match))
149
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150(define-public 4store
151 (package
152 (name "4store")
153 (version "1.1.6")
154 (source (origin
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155 (method git-fetch)
156 (uri (git-reference
b0e7b699 157 (url "https://github.com/4store/4store")
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158 (commit (string-append "v" version))))
159 (file-name (git-file-name name version))
4c6aa73b 160 (sha256
50e20b8f 161 (base32 "1kzdfmwpzy64cgqlkcz5v4klwx99w0jk7afckyf7yqbqb4rydmpk"))
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162 (patches (search-patches "4store-unset-preprocessor-directive.patch"
163 "4store-fix-buildsystem.patch"))))
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164 (build-system gnu-build-system)
165 (native-inputs
166 `(("perl" ,perl)
167 ("python" ,python-2)
168 ("autoconf" ,autoconf)
169 ("automake" ,automake)
b94a6ca0 170 ("gettext" ,gettext-minimal)
4c6aa73b 171 ("libtool" ,libtool)
74c8b174 172 ("pcre" ,pcre "bin") ;for 'pcre-config'
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173 ("pkg-config" ,pkg-config)))
174 (inputs
175 `(("glib" ,glib)
176 ("rasqal" ,rasqal)
177 ("libxml2" ,libxml2)
178 ("raptor2" ,raptor2)
179 ("readline" ,readline)
180 ("avahi" ,avahi)
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181 ("cyrus-sasl" ,cyrus-sasl)
182 ("openssl" ,openssl)
bb93042c 183 ("util-linux" ,util-linux "lib")))
4c6aa73b 184 ;; http://www.4store.org has been down for a while now.
bbf9092b 185 (home-page "https://github.com/4store/4store")
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186 (synopsis "Clustered RDF storage and query engine")
187 (description "4store is a RDF/SPARQL store written in C, supporting
188either single machines or networked clusters.")
ba8b9f8d 189 (license license:gpl3+)))
4c6aa73b 190
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191(define-public go-gopkg.in-mgo.v2
192 (package
193 (name "go-gopkg.in-mgo.v2")
194 (version "2016.08.01")
195 (source (origin
196 (method git-fetch)
197 (uri (git-reference
198 (url "https://github.com/go-mgo/mgo")
199 (commit (string-append "r" version))))
200 (file-name (git-file-name name version))
201 (sha256
202 (base32
203 "0rwbi1z63w43b0z9srm8m7iz1fdwx7bq7n2mz862d6liiaqa59jd"))))
204 (build-system go-build-system)
205 (arguments
206 `(#:import-path "gopkg.in/mgo.v2"
207 ;; TODO: The tests fail as MongoDB fails to start
208 ;; Error parsing command line: unrecognised option '--chunkSize'
209 #:tests? #f
210 #:phases
211 (modify-phases %standard-phases
212 (delete 'reset-gzip-timestamps)
213 (add-before 'check 'start-mongodb
214 (lambda* (#:key tests? #:allow-other-keys)
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215 (when tests?
216 (with-directory-excursion "src/gopkg.in/mgo.v2"
217 (invoke "make" "startdb")))
218 #t))
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219 (add-after 'check 'stop'mongodb
220 (lambda* (#:key tests? #:allow-other-keys)
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221 (when tests?
222 (with-directory-excursion "src/gopkg.in/mgo.v2"
223 (invoke "make" "stopdb")))
224 #t)))))
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225 (native-inputs
226 `(("go-gopkg.in-check.v1" ,go-gopkg.in-check.v1)
227 ("mongodb" ,mongodb)
228 ("daemontools" ,daemontools)))
229 (synopsis "@code{mgo} offers a rich MongoDB driver for Go.")
230 (description
231 "@code{mgo} (pronounced as mango) is a MongoDB driver for the Go language.
232It implements a rich selection of features under a simple API following
233standard Go idioms.")
de1d778e 234 (home-page "https://labix.org/mgo")
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235 (license license:bsd-2)))
236
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237(define-public ephemeralpg
238 (package
239 (name "ephemeralpg")
33df4763 240 (version "3.1")
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241 (source
242 (origin
243 (method url-fetch)
244 (uri (string-append
8e716256 245 "https://eradman.com/ephemeralpg/code/ephemeralpg-"
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246 version ".tar.gz"))
247 (sha256
33df4763 248 (base32 "1ap22ki8yz6agd0qybcjgs4b9izw1rwwcgpxn3jah2ccfyax34s6"))))
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249 (build-system gnu-build-system)
250 (arguments
ddb418b5 251 `(#:make-flags (list (string-append "CC=" ,(cc-for-target))
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252 (string-append "PREFIX=" %output))
253 #:phases
254 (modify-phases %standard-phases
6c54d06e 255 (delete 'configure) ; no configure script
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256 (add-after 'install 'wrap
257 (lambda* (#:key inputs outputs #:allow-other-keys)
258 (let ((out (assoc-ref outputs "out")))
259 (wrap-program (string-append out "/bin/pg_tmp")
260 `("PATH" ":" prefix
261 (,(string-append (assoc-ref inputs "util-linux")
262 "/bin")
263 ,(string-append (assoc-ref inputs "postgresql")
264 "/bin")
fa8343de 265 ;; For getsocket.
6fc03fcc 266 ,(string-append out "/bin")))))
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267 #t)))
268 #:test-target "test"))
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269 (inputs
270 `(("postgresql" ,postgresql)
271 ("util-linux" ,util-linux)))
272 (native-inputs
6c54d06e 273 ;; For tests.
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274 `(("ruby" ,ruby)
275 ("which" ,which)))
8e716256 276 (home-page "https://eradman.com/ephemeralpg/")
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277 (synopsis "Run temporary PostgreSQL databases")
278 (description
279 "@code{pg_tmp} creates temporary PostgreSQL databases, suitable for tasks
280like running software test suites. Temporary databases created with
281@code{pg_tmp} have a limited shared memory footprint and are automatically
282garbage-collected after a configurable number of seconds (the default is
28360).")
284 (license license:isc)))
285
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286(define-public es-dump-restore
287 (package
288 (name "es-dump-restore")
289 (version "2.1.0")
290 (source
291 (origin
292 (method url-fetch)
293 (uri (rubygems-uri "es_dump_restore" version))
294 (sha256
295 (base32
296 "020yk7f1hw48clmf5501z3xv9shsdchyymcv0y2cci2c1xvr1mim"))))
297 (build-system ruby-build-system)
298 (arguments
0076f5a9 299 '(#:tests? #f)) ;; No testsuite.
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300 (propagated-inputs
301 `(("ruby-httpclient" ,ruby-httpclient)
302 ("ruby-multi-json" ,ruby-multi-json)
303 ("ruby-progress_bar" ,ruby-progress_bar)
304 ("ruby-rubyzip" ,ruby-rubyzip)
305 ("ruby-thor" ,ruby-thor)))
306 (synopsis "Utility for dumping and restoring ElasticSearch indexes")
307 (description
308 "This package provides a utility for dumping the contents of an
309ElasticSearch index to a compressed file and restoring the dumpfile back to an
310ElasticSearch server")
311 (home-page "https://github.com/patientslikeme/es_dump_restore")
312 (license license:expat)))
313
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314(define-public firebird
315 (package
316 (name "firebird")
317 (version "3.0.7")
318 (source
319 (let ((revision "33374-0"))
320 (origin
321 (method url-fetch)
322 (uri (string-append "https://github.com/FirebirdSQL/"
323 "firebird/releases/download/R"
324 (string-replace-substring version "." "_") "/"
325 "Firebird-" version "." revision ".tar.bz2"))
326 (sha256
327 (base32 "0xpy1bncz36c6n28y7kllm1dkrdkn4vb4gw2n43f2351mznmrf5c"))
328 (modules '((guix build utils)))
329 (snippet
330 `(begin
331 (for-each
332 delete-file-recursively
333 (list "extern/btyacc/test" ; TODO: package and remove entirely
334 "extern/editline"
335 "extern/icu"
336 "extern/libtommath"
337 "extern/zlib"
338 "src/include/firebird/impl/boost"
339
340 ;; Missing licence.
341 "builds/install/arch-specific/solaris"
342 "extern/SfIO"
343 "src/msgs/templates.sql"
344
345 ;; Generated files missing sources.
346 "doc/Firebird-3-QuickStart.pdf"
347 (string-append "doc/Firebird-" ,version
348 "-ReleaseNotes.pdf")
349 "doc/README.SecureRemotePassword.html"))
350 #t)))))
351 (build-system gnu-build-system)
352 (outputs (list "debug" "out"))
353 (arguments
354 `(#:configure-flags
355 (let ((out (assoc-ref %outputs "out")))
356 (list (string-append "--with-fbsbin=" out "/sbin")
357 (string-append "--with-fbdoc=" out "/share/doc/"
358 ,name "-" ,version)
359 (string-append "--with-fbconf=" out "/lib/firebird")
360 (string-append "--with-fbintl=" out "/lib/firebird/intl")
361 (string-append "--with-fbmisc=" out "/lib/firebird/misc")
362 (string-append "--with-fbmsg=" out "/lib/firebird")
363 (string-append "--with-fbplugins=" out "/lib/firebird/plugins")
364 (string-append "--with-fbudf=" out "/lib/firebird/UDF")
365 "--with-fbglock=/run/firebird"
366 "--with-fblog=/var/log/firebird"
367 "--with-fbhelp=/var/lib/firebird/system"
368 "--with-fbsecure-db=/var/lib/firebird/secure"
369 "--without-fbsample"
370 "--without-fbsample-db"
371 "--with-system-editline"))
372 #:make-flags
373 (list (string-append "CC=" ,(cc-for-target))
374 ;; The plugins/ can't find libfbclient otherwise.
375 (string-append "LDFLAGS=-Wl,-rpath="
376 (assoc-ref %outputs "out") "/lib"))
377 #:tests? #f ; no test suite
378 #:modules ((guix build gnu-build-system)
379 (guix build utils)
380 (srfi srfi-26))
381 #:phases
382 (modify-phases %standard-phases
383 (add-after 'unpack 'use-system-boost
384 (lambda _
385 (substitute* "src/include/firebird/Message.h"
386 (("\"\\./impl/boost/preprocessor/seq/for_each_i\\.hpp\"")
387 "<boost/preprocessor/seq/for_each_i.hpp>")
388 (("FB_BOOST_") "BOOST_"))
389 #t))
390 (add-after 'unpack 'patch-installation
391 (lambda _
392 (substitute*
393 "builds/install/arch-specific/linux/makeInstallImage.sh.in"
394 (("/bin/sh") (which "bash"))
395 ;; Remove shell script helpers from $PATH.
396 (("(addLibs|cp) .*\\.sh .*@FB_SBINDIR@") ":")
397 ;; Put files where Guix users expect them.
398 (("(License\\.txt.*)@FB_CONFDIR" match)
399 (string-append match "@FB_DOCDIR@"))
400 (("@FB_CONFDIR@(.*License\\.txt.*)" match)
401 (string-append "@FB_DOCDIR@" match))
402 (("(cp .*/doc/.*)@FB_CONFDIR@(.*)" _ head tail)
403 (string-append head "@FB_DOCDIR@" tail "\n")))
404 (substitute*
405 (list "builds/install/posix-common/changeServerMode.sh.in"
406 "builds/install/posix-common/install.sh.in")
407 ;; Skip phases that (could) cause problems in Guix.
408 (("check(InstallUser|IfServerRunning|Libraries)|addFirebirdUser")
409 ":")
410 ;; Skip phases that are merely pointless on Guix.
411 (("buildUninstallFile|installInitdScript|startFirebird") ":")
412 ;; Omit randomly generated password with bonus timestamp.
413 (("setDBAPassword") ":"))
414
415 ;; These promote proprietary workflows not relevant on Guix.
416 (for-each delete-file-recursively
417 (find-files "doc" "README\\.(build\\.msvc|NT|Win)"))
418 #t))
419 (add-after 'configure 'delete-init-scripts
420 (lambda _
421 (delete-file-recursively "gen/install/misc")
422 #t))
423 (add-before 'build 'set-build-environment-variables
424 (lambda _
425 ;; ‘isql’ needs to run & find libfbclient.so during the build.
426 ;; This doubles as a rudimentary test in lieu of a test suite.
427 (setenv "LD_LIBRARY_PATH"
428 (string-append (assoc-ref %build-inputs "icu4c") "/lib"))
429 #t))
430 (add-before 'install 'keep-embedded-debug-symbols
431 (lambda _
432 ;; Let the gnu-build-system separate & deal with them later.
433 ;; XXX Upstream would use ‘--strip-unneeded’, shaving a whole
434 ;; megabyte off Guix's 7.7M libEngine12.so, for example.
435 (substitute* "gen/Makefile.install"
436 (("readelf") "false"))
437 #t))
438 (add-after 'install 'prune-undesirable-files
439 (lambda* (#:key outputs #:allow-other-keys)
440 (let ((out (assoc-ref outputs "out")))
441 (with-directory-excursion out
442 ;; Remove example binaries.
443 (for-each delete-file-recursively
444 (find-files "." "example"))
445 ;; Delete (now-)empty directories.
446 (for-each rmdir
447 (list "include/firebird/impl"
448 "lib/firebird/plugins/udr"))
449 #t)))))))
450 (inputs
451 `(("boost" ,boost)
452 ("editline" ,editline)
453 ("icu4c" ,icu4c-67)
454 ("libtommath" ,libtommath)
455 ("ncurses" ,ncurses)
456 ("zlib" ,zlib)))
457 (home-page "https://www.firebirdsql.org")
458 (synopsis "Relational database with many ANSI SQL standard features")
459 (description
460 "Firebird is an SQL @acronym{RDBMS, relational database management system}
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461with rich support for ANSI SQL (e.g., @code{INSERT...RETURNING}) including
462@acronym{UDFs, user-defined functions} and PSQL stored procedures, cursors, and
463triggers. Transactions provide full ACID-compliant referential integrity.
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464
465The database requires very little manual maintenance once set up, making it
466ideal for small business or embedded use.
467
468When installed as a traditional local or remote (network) database server,
469Firebird can grow to terabyte scale with proper tuning---although PostgreSQL
470may be a better choice for such very large environments.
471
472Firebird can also be embedded into stand-alone applications that don't want or
473need a full client & server. Used in this manner, it offers richer SQL support
474than SQLite as well as the option to seamlessly migrate to a client/server
475database later.")
476 (properties
477 `((lint-hidden-cve . ("CVE-2017-6369"))))
478 (license
479 ;; See doc/license/README.license.usage.txt for rationale & details.
480 (list license:bsd-3 ; src/common/sha2/
481 license:bsd-4 ; src/common/enc.cpp
482 license:gpl2+ ; builds/posix/make.defaults
483 (license:non-copyleft "file:///builds/install/misc/IPLicense.txt"
484 "InterBase Public License v1.0")
485 (license:non-copyleft "file:///builds/install/misc/IDPLicense.txt"
486 "Initial Developer's Public License v1.0")
487 license:lgpl2.1 ; exception for OSI-compatible licences
488 license:mpl1.1 ; examples/interfaces/0{6,8}*.cpp
489 license:public-domain)))) ; including files without explicit licence
490
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491(define-public leveldb
492 (package
493 (name "leveldb")
3a32be71 494 (version "1.22")
b9f771a7 495 (source (origin
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496 (method git-fetch)
497 (uri (git-reference
498 (url "https://github.com/google/leveldb")
5cc013f0 499 (commit version)))
ad7c77fd 500 (file-name (git-file-name name version))
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501 (sha256
502 (base32
3a32be71 503 "0qrnhiyq7r4wa1a4wi82zgns35smj94mcjsc7kfs1k6ia9ys79z7"))))
5cc013f0 504 (build-system cmake-build-system)
b9f771a7 505 (arguments
5cc013f0 506 `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON" "-DLEVELDB_BUILD_TESTS=ON")))
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507 (inputs
508 `(("snappy" ,snappy)))
fd423e4d 509 (home-page "https://github.com/google/leveldb")
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510 (synopsis "Fast key-value storage library")
511 (description
512 "LevelDB is a fast key-value storage library that provides an ordered
513mapping from string keys to string values.")
ba8b9f8d 514 (license license:bsd-3)))
b9f771a7 515
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516(define-public memcached
517 (package
518 (name "memcached")
973218a3 519 (version "1.5.20")
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520 (source
521 (origin
522 (method url-fetch)
523 (uri (string-append
524 "https://memcached.org/files/memcached-" version ".tar.gz"))
525 (sha256
973218a3 526 (base32 "1r511qr95q0ywdaql3pdjiwzkfqxhhfzb13ilvl7mznfm4iv1myg"))))
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527 (build-system gnu-build-system)
528 (inputs
529 `(("libevent" ,libevent)
530 ("cyrus-sasl" ,cyrus-sasl)))
531 (home-page "https://memcached.org/")
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532 (synopsis "In-memory caching service")
533 (description "Memcached is an in-memory key-value store. It has a small
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534and generic API, and was originally intended for use with dynamic web
535applications.")
536 (license license:bsd-3)))
537
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538(define-public libmemcached
539 (package
540 (name "libmemcached")
541 (version "1.0.18")
542 ;; We build from the sources since we want to build the extra HTML
543 ;; documentation which is not included with the release.
544 (source (origin
545 (method bzr-fetch)
546 (uri (bzr-reference
547 (url "lp:libmemcached/1.0")
548 (revision (string-append "tag:" version))))
549 (file-name (string-append name "-" version "-checkout"))
550 (sha256
551 (base32
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552 "1842s4dxdh21gdr46q4dgxigidcs6dkqnbnqjwb9l8r0bqx5nb10"))
553 (patches
554 (search-patches "libmemcached-build-with-gcc7.patch"))))
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555 (build-system gnu-build-system)
556 (native-inputs
557 `(("memcached" ,memcached)
558 ("libtool" ,libtool)
559 ("autoconf" ,autoconf)
560 ("automake" ,automake)
561 ("bison" ,bison)
562 ("flex" ,flex)
563 ("perl" ,perl)
564 ("python-sphinx" ,python-sphinx))) ;to build the HTML doc.
565 (inputs
566 `(("libevent" ,libevent)
567 ("cyrus-sasl" ,cyrus-sasl)))
568 (outputs '("out" "doc"))
569 (arguments
570 '(#:phases
571 (modify-phases %standard-phases
572 (add-before 'bootstrap 'fix-configure.ac
573 ;; Move the AC_CONFIG_AUX_DIR macro use under AC_INIT, otherwise we
574 ;; get the error ``configure: error: cannot find install-sh,
575 ;; install.sh, or shtool in "." "./.." "./../.."`` (see:
576 ;; https://debbugs.gnu.org/cgi/bugreport.cgi?bug=19539 and
577 ;; https://bugs.launchpad.net/libmemcached/+bug/1803922).
578 (lambda _
579 (delete-file "bootstrap.sh") ;not useful in the context of Guix
580 (substitute* "configure.ac"
581 (("^AC_CONFIG_AUX_DIR\\(\\[build-aux\\]\\).*") "")
582 (("(^AC_INIT.*)" anchor)
583 (string-append anchor "AC_CONFIG_AUX_DIR([build-aux])\n")))
584 #t))
585 (add-before 'bootstrap 'disable-failing-tests
586 ;; See: https://bugs.launchpad.net/libmemcached/+bug/1803926
587 (lambda _
588 ;; Mark some heavily failing test suites as expected to fail.
589 (substitute* "Makefile.am"
590 (("(XFAIL_TESTS =[^\n]*)" xfail_tests)
591 (string-append xfail_tests " tests/testudp"
592 " tests/libmemcached-1.0/testapp"
593 " tests/libmemcached-1.0/testsocket")))
594 ;; Disable two tests of the unittest test suite.
595 (substitute* "libtest/unittest.cc"
596 ((".*echo_fubar_BINARY \\},.*") "")
597 ((".*application_doesnotexist_BINARY \\},.*") ""))
598 #t))
599 (add-after 'disable-dns-tests 'build-and-install-html-doc
600 (lambda* (#:key outputs #:allow-other-keys)
601 (let ((html (string-append (assoc-ref outputs "doc")
602 "/share/doc/libmemcached/html/")))
603 (invoke "make" "install-html")
604 ;; Cleanup useless files.
605 (for-each delete-file-recursively
606 (map (lambda (x) (string-append html x))
607 '("_sources" ".doctrees" ".buildinfo"))))
608 #t)))))
609 (home-page "https://libmemcached.org/")
610 (synopsis "C++ library for memcached")
611 (description "libMemcached is a library to use memcached in C/C++
612applications. It comes with a complete reference guide and documentation of
613the API, and provides features such as:
614@itemize
615@item Asynchronous and synchronous transport support
616@item Consistent hashing and distribution
617@item Tunable hashing algorithm to match keys
618@item Access to large object support
619@item Local replication
620@end itemize")
621 (license license:bsd-3)))
622
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623(define-public python-pylibmc
624 (package
625 (name "python-pylibmc")
79bc9176 626 (version "1.6.1")
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627 (source
628 (origin
629 (method url-fetch)
630 (uri (pypi-uri "pylibmc" version))
631 (sha256
79bc9176 632 (base32 "1sg7d9j0v6g3xg3finf4l1hb72c13vcyyi6rqrc9shbx903d93ca"))))
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633 (build-system python-build-system)
634 (arguments
635 '(#:phases
636 (modify-phases %standard-phases
637 (add-before 'check 'start-memcached-daemon
638 ;; The test suite requires a memcached server.
639 (lambda _
640 (invoke "memcached" "-d"))))))
641 (native-inputs
642 `(("memcached" ,memcached)
643 ("python-nose" ,python-nose)))
644 (inputs
645 `(("libmemcached" ,libmemcached)
646 ("zlib" ,zlib)
647 ("cyrus-sasl" ,cyrus-sasl)))
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648 (home-page "http://sendapatch.se/projects/pylibmc/")
649 (synopsis "Python client for memcached")
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650 (description
651 "@code{pylibmc} is a client in Python for memcached. It is a wrapper
652around TangentOrg’s libmemcached library, and can be used as a drop-in
653replacement for the code@{python-memcached} library.")
654 (license license:bsd-3)))
655
656(define-public python2-pylibmc
657 (package-with-python2 python-pylibmc))
658
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659(define-public mongodb
660 (package
661 (name "mongodb")
f1c49e75 662 (version "3.4.10")
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663 (source (origin
664 (method url-fetch)
665 (uri (string-append "https://github.com/mongodb/mongo/archive/r"
666 version ".tar.gz"))
667 (file-name (string-append name "-" version ".tar.gz"))
668 (sha256
f1c49e75 669 (base32 "0676lvkljj7a5hdhv78dbykqnqrj9lbn9799mi84b8vbnzsq961r"))
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670 (modules '((guix build utils)))
671 (snippet
672 '(begin
673 (for-each (lambda (dir)
674 (delete-file-recursively
675 (string-append "src/third_party/" dir)))
676 '("pcre-8.41" "scons-2.5.0" "snappy-1.1.3"
677 "valgrind-3.11.0" "wiredtiger"
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678 "yaml-cpp-0.5.3" "zlib-1.2.8"))
679 #t))
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680 (patches
681 (list
682 (search-patch "mongodb-support-unknown-linux-distributions.patch")))))
6e385b76 683 (build-system scons-build-system)
6bbbca90 684 (inputs
9d67480a 685 `(("openssl" ,openssl-1.0)
6bbbca90 686 ("pcre" ,pcre)
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687 ,@(match (%current-system)
688 ((or "x86_64-linux" "aarch64-linux" "mips64el-linux")
689 `(("wiredtiger" ,wiredtiger)))
690 (_ `()))
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691 ("yaml-cpp" ,yaml-cpp)
692 ("zlib" ,zlib)
51b0f09e 693 ("snappy" ,snappy)))
6bbbca90 694 (native-inputs
6e385b76 695 `(("valgrind" ,valgrind)
90205b62 696 ("perl" ,perl)
61506fe5 697 ("python" ,python-2)
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698 ("python2-pymongo" ,python2-pymongo)
699 ("python2-pyyaml" ,python2-pyyaml)
5a8ef3c1 700 ("tzdata" ,tzdata-for-tests)))
6bbbca90 701 (arguments
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702 `(#:scons ,scons-python2
703 #:phases
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704 (let ((common-options
705 `(;; "--use-system-tcmalloc" TODO: Missing gperftools
706 "--use-system-pcre"
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707 ;; wiredtiger is 64-bit only
708 ,,(if (any (cute string-prefix? <> (or (%current-target-system)
709 (%current-system)))
710 '("i686-linux" "armhf-linux"))
711 ``"--wiredtiger=off"
319b52c3 712 ``"--use-system-wiredtiger")
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713 ;; TODO
714 ;; build/opt/mongo/db/fts/unicode/string.o failed: Error 1
715 ;; --use-system-boost
716 "--use-system-snappy"
717 "--use-system-zlib"
718 "--use-system-valgrind"
719 ;; "--use-system-stemmer" TODO: Missing relevant package
720 "--use-system-yaml"
721 "--disable-warnings-as-errors"
722 ,(format #f "--jobs=~a" (parallel-job-count))
723 "--ssl")))
724 (modify-phases %standard-phases
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725 (add-after 'unpack 'patch
726 (lambda _
727 ;; Remove use of GNU extensions in parse_number_test.cpp, to
728 ;; allow compiling with GCC 7 or later
729 ;; https://jira.mongodb.org/browse/SERVER-28063
730 (substitute* "src/mongo/base/parse_number_test.cpp"
731 (("0xabcab\\.defdefP-10")
732 "687.16784283419838"))
733 #t))
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734 (add-after 'unpack 'scons-propagate-environment
735 (lambda _
736 ;; Modify the SConstruct file to arrange for
737 ;; environment variables to be propagated.
738 (substitute* "SConstruct"
739 (("^env = Environment\\(")
740 "env = Environment(ENV=os.environ, "))
741 #t))
742 (add-after 'unpack 'create-version-file
743 (lambda _
744 (call-with-output-file "version.json"
745 (lambda (port)
746 (display ,(simple-format #f "{
747 \"version\": \"~A\"
748}" version) port)))
749 #t))
750 (replace 'build
751 (lambda _
d9bcdfce 752 (apply invoke `("scons"
6bbbca90 753 ,@common-options
d9bcdfce 754 "mongod" "mongo" "mongos"))))
6bbbca90 755 (replace 'check
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756 (lambda* (#:key tests? inputs #:allow-other-keys)
757 (setenv "TZDIR"
758 (string-append (assoc-ref inputs "tzdata")
759 "/share/zoneinfo"))
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760 (when tests?
761 ;; Note that with the tests, especially the unittests, the
762 ;; build can take up to ~45GB of space, as many tests are
763 ;; individual executable files, with some being hundreds of
764 ;; megabytes in size.
765 (apply invoke `("scons" ,@common-options "dbtest" "unittests"))
766 (substitute* "build/unittests.txt"
767 ;; TODO: Don't run the async_stream_test, as it hangs
768 (("^build\\/opt\\/mongo\\/executor\\/async\\_stream\\_test\n$")
769 "")
770 ;; TODO: This test fails
771 ;; Expected 0UL != disks.size() (0 != 0) @src/mongo/util/procparser_test.cpp:476
772 (("^build\\/opt\\/mongo\\/util\\/procparser\\_test\n$")
773 ""))
774 (invoke "python" "buildscripts/resmoke.py"
775 "--suites=dbtest,unittests"
776 (format #f "--jobs=~a" (parallel-job-count))))
777 #t))
6bbbca90 778 (replace 'install
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779 (lambda* (#:key outputs #:allow-other-keys)
780 (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
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781 (install-file "mongod" bin)
782 (install-file "mongos" bin)
783 (install-file "mongo" bin))
784 #t))))))
785 (home-page "https://www.mongodb.org/")
786 (synopsis "High performance and high availability document database")
787 (description
788 "Mongo is a high-performance, high availability, schema-free
789document-oriented database. A key goal of MongoDB is to bridge the gap
790between key/value stores (which are fast and highly scalable) and traditional
791RDBMS systems (which are deep in functionality).")
792 (license (list license:agpl3
793 ;; Some parts are licensed under the Apache License
794 license:asl2.0))))
795
8de54c63 796(define-public mycli
797 (package
798 (name "mycli")
ce13a54a 799 (version "1.22.2")
8de54c63 800 (source
801 (origin
802 (method url-fetch)
803 (uri (pypi-uri "mycli" version))
804 (sha256
ce13a54a 805 (base32 "1lq2x95553vdmhw13cxcgsd2g2i32izhsb7hxd4m1iwf9b3msbpv"))))
8de54c63 806 (build-system python-build-system)
807 (arguments
808 `(#:tests? #f)) ; tests expect a running MySQL
809 (propagated-inputs
810 `(("python-cli-helpers" ,python-cli-helpers)
811 ("python-click" ,python-click)
812 ("python-configobj" ,python-configobj)
813 ("python-cryptography" ,python-cryptography)
814 ("python-prompt-toolkit" ,python-prompt-toolkit)
815 ("python-pygments" ,python-pygments)
816 ("python-pymysql" ,python-pymysql)
817 ("python-sqlparse" ,python-sqlparse)))
818 (home-page "http://mycli.net")
819 (synopsis
820 "Terminal Client for MySQL with AutoCompletion and Syntax Highlighting")
821 (description
822 "MyCLI is a command line interface for MySQL, MariaDB, and Percona with
823auto-completion and syntax highlighting.")
824 (license license:bsd-3)))
825
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826;; XXX When updating, check whether boost-for-mysql is still needed.
827;; It might suffice to patch ‘cmake/boost.cmake’ as done in the past.
5f96f303
LC
828(define-public mysql
829 (package
830 (name "mysql")
aace6f6d 831 (version "5.7.27")
5f96f303
LC
832 (source (origin
833 (method url-fetch)
23bbd7dd 834 (uri (list (string-append
7fe3a57a 835 "https://dev.mysql.com/get/Downloads/MySQL-"
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EF
836 (version-major+minor version) "/"
837 name "-" version ".tar.gz")
838 (string-append
7fe3a57a 839 "https://downloads.mysql.com/archives/get/file/"
23bbd7dd 840 name "-" version ".tar.gz")))
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LC
841 (sha256
842 (base32
aace6f6d 843 "1fhv16zr46pxm1j8vb8x8mh3nwzglg01arz8gnazbmjqldr5idpq"))))
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844 (build-system cmake-build-system)
845 (arguments
69419655 846 `(#:configure-flags
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SB
847 '("-DBUILD_CONFIG=mysql_release"
848 "-DWITH_SSL=system"
849 "-DWITH_ZLIB=system"
850 "-DDEFAULT_CHARSET=utf8"
851 "-DDEFAULT_COLLATION=utf8_general_ci"
852 "-DMYSQL_DATADIR=/var/lib/mysql"
853 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
854 "-DINSTALL_INFODIR=share/mysql/docs"
855 "-DINSTALL_MANDIR=share/man"
856 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
857 "-DINSTALL_SCRIPTDIR=bin"
858 "-DINSTALL_INCLUDEDIR=include/mysql"
859 "-DINSTALL_DOCREADMEDIR=share/mysql/docs"
860 "-DINSTALL_SUPPORTFILESDIR=share/mysql"
861 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
862 "-DINSTALL_DOCDIR=share/mysql/docs"
863 "-DINSTALL_SHAREDIR=share/mysql"
864 ;; Get rid of test data.
865 "-DINSTALL_MYSQLTESTDIR="
3f289db6
LC
866 "-DINSTALL_SQLBENCHDIR=")
867 #:phases (modify-phases %standard-phases
6a52df50
LC
868 (add-after
869 'install 'remove-extra-binaries
870 (lambda* (#:key outputs #:allow-other-keys)
871 (let ((out (assoc-ref outputs "out")))
872 ;; Remove the 3 *_embedded files, which weigh in at
873 ;; 14 MiB each.
874 (for-each delete-file
875 (find-files (string-append out "/bin")
876 "_embedded$"))
7d099cbe 877 #t))))))
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878 (native-inputs
879 `(("bison" ,bison)
aace6f6d
EF
880 ("perl" ,perl)
881 ("pkg-config" ,pkg-config)))
5f96f303 882 (inputs
7cbf06d8 883 `(("boost" ,boost-for-mysql)
23bbd7dd 884 ("libaio" ,libaio)
aace6f6d 885 ("libtirpc" ,libtirpc)
23bbd7dd 886 ("ncurses" ,ncurses)
5f96f303 887 ("openssl" ,openssl)
aace6f6d 888 ("rpcsvc-proto" ,rpcsvc-proto) ; rpcgen
23bbd7dd 889 ("zlib" ,zlib)))
7fe3a57a 890 (home-page "https://www.mysql.com/")
9e771e3b 891 (synopsis "Fast, easy to use, and popular database")
5f96f303
LC
892 (description
893 "MySQL is a fast, reliable, and easy to use relational database
894management system that supports the standardized Structured Query
895Language.")
ba8b9f8d 896 (license license:gpl2)))
5f96f303 897
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898(define-public mariadb
899 (package
900 (name "mariadb")
525ebb85 901 (version "10.5.6")
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902 (source (origin
903 (method url-fetch)
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904 (uri (string-append "https://downloads.mariadb.com/MariaDB"
905 "/mariadb-" version "/source/mariadb-"
906 version ".tar.gz"))
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907 (sha256
908 (base32
525ebb85 909 "1i257h0zdypdfj5wkg6ck9pxlkph0jvjs92k22pjr6gnx5lxs1gz"))
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910 (modules '((guix build utils)))
911 (snippet
912 '(begin
913 ;; Delete bundled snappy and xz.
914 (delete-file-recursively "storage/tokudb/PerconaFT/third_party")
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915 (substitute* "storage/tokudb/PerconaFT/CMakeLists.txt"
916 ;; This file checks that the bundled sources are present and
917 ;; declares build procedures for them.
918 (("^include\\(TokuThirdParty\\)") ""))
919 (substitute* "storage/tokudb/PerconaFT/ft/CMakeLists.txt"
920 ;; Don't attempt to use the procedures we just removed.
921 ((" build_lzma build_snappy") ""))
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922
923 ;; Preserve CMakeLists.txt for these.
924 (for-each (lambda (file)
925 (unless (string-suffix? "CMakeLists.txt" file)
926 (delete-file file)))
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927 (append (find-files "extra/wolfssl")
928 (find-files "zlib")))
2001d2da 929 #t))))
77631745 930 (build-system cmake-build-system)
2b8491fb 931 (outputs '("out" "lib" "dev"))
77631745 932 (arguments
5193ae64 933 `(#:configure-flags
2b8491fb
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934 (list
935 "-DBUILD_CONFIG=mysql_release"
6cf8e576
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936 ;; Linking with libarchive fails, like this:
937
938 ;; ld: /gnu/store/...-libarchive-3.2.2/lib/libarchive.a(archive_entry.o):
939 ;; relocation R_X86_64_32 against `.bss' can not be used when
940 ;; making a shared object; recompile with -fPIC
941
942 ;; For now, disable the features that that use libarchive (xtrabackup).
943 "-DWITH_LIBARCHIVE=OFF"
944
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945 ;; Disable the TokuDB engine, because its test suite frequently fails,
946 ;; and loading it crashes the server: <https://bugs.gnu.org/35521>.
947 "-DTOKUDB_OK=OFF"
948
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949 ;; Ensure the system libraries are used.
950 "-DWITH_JEMALLOC=yes"
951 "-DWITH_PCRE=system"
952 "-DWITH_SSL=system"
953 "-DWITH_ZLIB=system"
954
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SB
955 "-DDEFAULT_CHARSET=utf8"
956 "-DDEFAULT_COLLATION=utf8_general_ci"
957 "-DMYSQL_DATADIR=/var/lib/mysql"
958 "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
2b8491fb
JL
959 (string-append "-DCMAKE_INSTALL_PREFIX=" (assoc-ref %outputs "lib"))
960 (string-append "-DCMAKE_INSTALL_RPATH=" (assoc-ref %outputs "lib")
961 "/lib")
962 (string-append "-DINSTALL_INFODIR=" (assoc-ref %outputs "out")
963 "/share/mysql/docs")
964 (string-append "-DINSTALL_MANDIR=" (assoc-ref %outputs "out")
965 "/share/man")
966 (string-append "-DINSTALL_SCRIPTDIR=" (assoc-ref %outputs "out") "/bin")
967 (string-append "-DINSTALL_BINDIR=" (assoc-ref %outputs "out") "/bin")
968 "-DCMAKE_INSTALL_LIBDIR=lib"
77631745 969 "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
2b8491fb
JL
970 (string-append "-DINSTALL_INCLUDEDIR=" (assoc-ref %outputs "dev")
971 "/include/mysql")
972 (string-append "-DINSTALL_DOCREADMEDIR=" (assoc-ref %outputs "out")
973 "/share/mysql/docs")
974 (string-append "-DINSTALL_DOCDIR=" (assoc-ref %outputs "out")
975 "/share/mysql/docs")
976 (string-append "-DINSTALL_SUPPORTFILESDIR=" (assoc-ref %outputs "out")
977 "/share/mysql/support-files")
77631745 978 "-DINSTALL_MYSQLSHAREDIR=share/mysql"
4c27ea06 979 "-DINSTALL_SHAREDIR=share")
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980 #:phases
981 (modify-phases %standard-phases
525ebb85 982 (add-after 'unpack 'adjust-output-references
2001d2da 983 (lambda _
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984 ;; The build system invariably prepends $CMAKE_INSTALL_PREFIX
985 ;; to other variables such as $INSTALL_INCLUDEDIR, which does
986 ;; not work when the latter uses an absolute file name.
987 (substitute* "libmariadb/mariadb_config/mariadb_config.c.in"
988 (("@CMAKE_INSTALL_PREFIX@/@INSTALL_INCLUDEDIR@")
989 "@INSTALL_INCLUDEDIR@"))
990 (substitute* "libmariadb/mariadb_config/libmariadb.pc.in"
991 (("\\$\\{prefix\\}/@INSTALL_INCLUDEDIR@")
992 "@INSTALL_INCLUDEDIR@"))
993 (substitute* "include/CMakeLists.txt"
994 (("\\\\\\$\\{CMAKE_INSTALL_PREFIX\\}/\\$\\{INSTALL_INCLUDEDIR\\}")
995 "${INSTALL_INCLUDEDIR}"))
2001d2da 996 #t))
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MB
997 (add-after 'unpack 'adjust-tests
998 (lambda _
999 (let ((disabled-tests
1000 '(;; These fail because root@hostname == root@localhost in
1001 ;; the build environment, causing a user count mismatch.
1002 ;; See <https://jira.mariadb.org/browse/MDEV-7761>.
525ebb85 1003 "funcs_1.is_columns_mysql"
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MB
1004 "main.join_cache"
1005 "main.explain_non_select"
e313327e 1006 "main.stat_tables"
1d957c79 1007 "main.stat_tables_innodb"
3418e43b 1008 "roles.acl_statistics"
69fb26d4
MB
1009
1010 ;; This file contains a time bomb which makes it fail after
0ce64334 1011 ;; 2030-12-31. See <https://bugs.gnu.org/34351> for details.
525ebb85 1012 "main.mysqldump"))
3869f39e
MB
1013
1014 ;; This file contains a list of known-flaky tests for this
1015 ;; release. Append our own items.
1016 (unstable-tests (open-file "mysql-test/unstable-tests" "a")))
1017 (for-each (lambda (test)
1018 (format unstable-tests "~a : ~a\n"
1019 test "Disabled in Guix"))
1020 disabled-tests)
1021 (close-port unstable-tests)
1022
525ebb85 1023 ;; XXX: These fail because they expect a latin1 charset and
ab0cb26f 1024 ;; collation. See <https://jira.mariadb.org/browse/MDEV-21264>.
525ebb85
MB
1025 (substitute* '("mysql-test/main/gis_notembedded.result"
1026 "mysql-test/main/system_mysql_db.result")
ab0cb26f
MB
1027 (("latin1_swedish_ci") "utf8_general_ci")
1028 (("\tlatin1") "\tutf8"))
1029
e313327e
MB
1030 (substitute* "mysql-test/suite/binlog/t/binlog_mysqlbinlog_stop_never.test"
1031 (("/bin/bash")
1032 (which "bash")))
1033
3869f39e
MB
1034 (substitute* "mysql-test/mysql-test-run.pl"
1035 (("/bin/ls") (which "ls"))
1036 (("/bin/sh") (which "sh")))
1037 #t)))
5b4d2e40
MB
1038 (add-before 'configure 'disable-plugins
1039 (lambda _
1040 (let ((disable-plugin (lambda (name)
1041 (call-with-output-file
1042 (string-append "plugin/" name
1043 "/CMakeLists.txt")
1044 (lambda (port)
1045 (format port "\n")))))
03335824 1046 (disabled-plugins '(;; XXX: Causes a test failure.
3869f39e 1047 "disks")))
5b4d2e40
MB
1048 (for-each disable-plugin disabled-plugins)
1049 #t)))
3869f39e
MB
1050 (replace 'check
1051 (lambda* (#:key (tests? #t) #:allow-other-keys)
1052 (if tests?
1053 (with-directory-excursion "mysql-test"
1054 (invoke "./mtr" "--verbose"
3418e43b 1055 "--retry=3"
71179b35
MB
1056 "--testcase-timeout=40"
1057 "--suite-timeout=600"
3869f39e 1058 "--parallel" (number->string (parallel-job-count))
b2bb04bd
MB
1059 ;; Skip the replication tests: they are very I/O
1060 ;; intensive and frequently causes indeterministic
1061 ;; failures even on powerful hardware.
1062 "--skip-rpl"
3869f39e
MB
1063 "--skip-test-list=unstable-tests"))
1064 (format #t "test suite not run~%"))
1065 #t))
77631745
SB
1066 (add-after
1067 'install 'post-install
939c5b2c 1068 (lambda* (#:key inputs outputs #:allow-other-keys)
77631745 1069 (let* ((out (assoc-ref outputs "out"))
2b8491fb 1070 (dev (assoc-ref outputs "dev"))
939c5b2c
MB
1071 (lib (assoc-ref outputs "lib"))
1072 (openssl (assoc-ref inputs "openssl")))
525ebb85
MB
1073 (substitute* (list (string-append out "/bin/mariadb-install-db")
1074 (string-append out "/bin/mysql_install_db"))
77631745 1075 (("basedir=\"\"")
525ebb85
MB
1076 (string-append "basedir=\"" out "\""))
1077 (("\\$basedir/share/mysql")
1078 (string-append lib "/share/mysql")))
1079
77631745 1080 ;; Remove unneeded files for testing.
2b8491fb 1081 (with-directory-excursion lib
77631745 1082 (for-each delete-file-recursively
525ebb85 1083 '("mysql-test" "sql-bench"))
963157f1
MB
1084 ;; And static libraries.
1085 (for-each delete-file (find-files "lib" "\\.a$")))
2b8491fb
JL
1086 (with-directory-excursion out
1087 (delete-file "share/man/man1/mysql-test-run.pl.1")
1088 ;; Delete huge and unnecessary executables.
525ebb85 1089 (for-each delete-file (find-files "bin" "test$")))
2b8491fb
JL
1090 (mkdir-p (string-append dev "/share"))
1091 (mkdir-p (string-append dev "/bin"))
525ebb85
MB
1092 (rename-file (string-append lib "/bin/mariadbd")
1093 (string-append out "/bin/mariadbd"))
2b8491fb
JL
1094 (rename-file (string-append lib "/bin/mysqld")
1095 (string-append out "/bin/mysqld"))
525ebb85
MB
1096 (mkdir-p (string-append dev "/lib"))
1097 (rename-file (string-append lib "/lib/pkgconfig")
1098 (string-append dev "/lib/pkgconfig"))
1099 (rename-file (string-append lib "/bin/mariadb_config")
1100 (string-append dev "/bin/mariadb_config"))
2b8491fb
JL
1101 (rename-file (string-append out "/bin/mysql_config")
1102 (string-append dev "/bin/mysql_config"))
939c5b2c
MB
1103
1104 ;; Embed an absolute reference to OpenSSL in mysql_config
1105 ;; and the pkg-config file to avoid propagation.
525ebb85 1106 ;; XXX: how to do this for mariadb_config.c.in?
939c5b2c 1107 (substitute* (list (string-append dev "/bin/mysql_config")
525ebb85 1108 (string-append dev "/lib/pkgconfig/mariadb.pc"))
939c5b2c
MB
1109 (("-lssl -lcrypto" all)
1110 (string-append "-L" openssl "/lib " all)))
1111
841ee2a8 1112 #t))))))
77631745
SB
1113 (native-inputs
1114 `(("bison" ,bison)
03335824 1115 ("perl" ,perl)))
77631745
SB
1116 (inputs
1117 `(("jemalloc" ,jemalloc)
1118 ("libaio" ,libaio)
1119 ("libxml2" ,libxml2)
1120 ("ncurses" ,ncurses)
525ebb85 1121 ("openssl" ,openssl)
ab0cb26f 1122 ("pam" ,linux-pam)
525ebb85 1123 ("pcre2" ,pcre2)
2001d2da 1124 ("xz" ,xz)
77631745 1125 ("zlib" ,zlib)))
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MB
1126 ;; The test suite is very resource intensive and can take more than three
1127 ;; hours on a x86_64 system. Give slow and busy machines some leeway.
1128 (properties '((timeout . 64800))) ;18 hours
77631745
SB
1129 (home-page "https://mariadb.org/")
1130 (synopsis "SQL database server")
1131 (description
1132 "MariaDB is a multi-user and multi-threaded SQL database server, designed
1133as a drop-in replacement of MySQL.")
ba8b9f8d 1134 (license license:gpl2)))
77631745 1135
2072bc08
PN
1136(define-public mariadb-connector-c
1137 (package
1138 (name "mariadb-connector-c")
3881d0dc
TGR
1139 (version "3.1.11")
1140 (source
1141 (origin
1142 (method url-fetch)
1143 (uri (string-append
1144 "https://downloads.mariadb.org/f/connector-c-" version
1145 "/mariadb-connector-c-" version "-src.tar.gz"
1146 "/from/https%3A//mirrors.ukfast.co.uk/sites/mariadb/?serve"))
1147 (sha256
1148 (base32 "03svzahdf7czjlm695c11r4bfd04qdqgx8r1vkpr1zlkjhwnqvry"))))
9077cf68 1149 (inputs
2072bc08
PN
1150 `(("openssl" ,openssl)))
1151 (build-system cmake-build-system)
9077cf68 1152 (arguments
87078871 1153 '(#:tests? #f)) ; no tests
2072bc08
PN
1154 (home-page "https://mariadb.com/kb/en/mariadb-connector-c/")
1155 (synopsis "Client library to connect to MySQL or MariaDB")
1156 (description "The MariaDB Connector/C is used to connect applications
1157developed in C/C++ to MariaDB and MySQL databases.")
1158 (license license:lgpl2.1+)))
9077cf68 1159
97dd1b15 1160;; Don't forget to update the other postgresql packages when upgrading this one.
5f96f303
LC
1161(define-public postgresql
1162 (package
1163 (name "postgresql")
4cff2303 1164 (version "10.13")
5f96f303
LC
1165 (source (origin
1166 (method url-fetch)
dbeaf8f2 1167 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
9020890b 1168 version "/postgresql-" version ".tar.bz2"))
5f96f303
LC
1169 (sha256
1170 (base32
4cff2303 1171 "1qal0yp7a90yzya7hl56gsmw5fvacplrdhpn7h9gnbyr1i2iyw2d"))
c336567d 1172 (patches (search-patches "postgresql-disable-resolve_symlinks.patch"))))
5f96f303 1173 (build-system gnu-build-system)
dd213082 1174 (arguments
8b7e6d00 1175 `(#:configure-flags '("--with-uuid=e2fs" "--with-openssl")
b7aa3f5d 1176 #:phases
dd213082
JD
1177 (modify-phases %standard-phases
1178 (add-before 'configure 'patch-/bin/sh
1179 (lambda _
1180 ;; Refer to the actual shell.
1181 (substitute* '("src/bin/pg_ctl/pg_ctl.c"
1182 "src/bin/psql/command.c")
1183 (("/bin/sh") (which "sh")))
b7aa3f5d
DM
1184 #t))
1185 (add-after 'build 'build-contrib
1186 (lambda _
1fbad3ad 1187 (invoke "make" "-C" "contrib")))
b7aa3f5d
DM
1188 (add-after 'install 'install-contrib
1189 (lambda _
1fbad3ad 1190 (invoke "make" "-C" "contrib" "install"))))))
5f96f303
LC
1191 (inputs
1192 `(("readline" ,readline)
bb93042c 1193 ("libuuid" ,util-linux "lib")
8b7e6d00 1194 ("openssl" ,openssl)
5f96f303 1195 ("zlib" ,zlib)))
d887f420 1196 (home-page "https://www.postgresql.org/")
5f96f303
LC
1197 (synopsis "Powerful object-relational database system")
1198 (description
1199 "PostgreSQL is a powerful object-relational database system. It is fully
1200ACID compliant, has full support for foreign keys, joins, views, triggers, and
1201stored procedures (in multiple languages). It includes most SQL:2008 data
1202types, including INTEGER, NUMERIC, BOOLEAN, CHAR, VARCHAR, DATE, INTERVAL, and
1203TIMESTAMP. It also supports storage of binary large objects, including
1204pictures, sounds, or video.")
ba8b9f8d 1205 (license (license:x11-style "file://COPYRIGHT"))))
5f96f303 1206
21b712ac
CB
1207(define-public postgresql-10 postgresql)
1208
91477def
GB
1209(define-public postgresql-11
1210 (package
1211 (inherit postgresql)
1212 (name "postgresql")
9d192665 1213 (version "11.6")
91477def
GB
1214 (source (origin
1215 (method url-fetch)
1216 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1217 version "/postgresql-" version ".tar.bz2"))
1218 (sha256
1219 (base32
9d192665 1220 "0w1iq488kpzfgfnlw4k32lz5by695mpnkq461jrgsr99z5zlz4j9"))))))
91477def 1221
7658d89b
EF
1222(define-public postgresql-9.6
1223 (package
1224 (inherit postgresql)
1225 (name "postgresql")
901c9930 1226 (version "9.6.16")
7658d89b
EF
1227 (source (origin
1228 (method url-fetch)
1229 (uri (string-append "https://ftp.postgresql.org/pub/source/v"
1230 version "/postgresql-" version ".tar.bz2"))
1231 (sha256
1232 (base32
901c9930 1233 "1rr2dgv4ams8r2lp13w85c77rkmzpb88fjlc28mvlw6zq2fblv2w"))))))
7658d89b 1234
9763102b
TGR
1235(define-public python-pymysql
1236 (package
1237 (name "python-pymysql")
4cb2f29e 1238 (version "0.9.3")
9763102b
TGR
1239 (source
1240 (origin
1241 (method url-fetch)
1242 (uri (pypi-uri "PyMySQL" version))
1243 (sha256
4cb2f29e 1244 (base32 "1ry8lxgdc1p3k7gbw20r405jqi5lvhi5wk83kxdbiv8xv3f5kh6q"))))
9763102b
TGR
1245 (build-system python-build-system)
1246 (native-inputs
1247 `(("python-unittest2" ,python-unittest2)))
1248 (inputs
1249 `(("python-cryptography" ,python-cryptography)))
1250 (arguments
1251 `(#:tests? #f)) ; tests expect a running MySQL
1252 (home-page "https://github.com/PyMySQL/PyMySQL/")
1253 (synopsis "Pure-Python MySQL driver")
1254 (description
1255 "PyMySQL is a pure-Python MySQL client library, based on PEP 249.
1256Most public APIs are compatible with @command{mysqlclient} and MySQLdb.")
1257 (license license:expat)))
1258
1259(define-public python2-pymysql
1260 (package-with-python2 python-pymysql))
1261
259a94e9
TD
1262(define-public qdbm
1263 (package
1264 (name "qdbm")
1265 (version "1.8.78")
1266 (source
1267 (origin
1268 (method url-fetch)
1269 (uri (string-append "http://fallabs.com/" name "/"
1270 name "-" version ".tar.gz"))
1271 (sha256
1272 (base32
1273 "0gmpvhn02pkq280ffmn4da1g4mdr1xxz7l80b7y4n7km1mrzwrml"))))
1274 (build-system gnu-build-system)
1275 (arguments
7dc0f1d5
TD
1276 `(#:configure-flags (list (string-append "LDFLAGS=-Wl,-rpath="
1277 (assoc-ref %outputs "out")
1278 "/lib"))
1279 #:make-flags (list "CFLAGS=-fPIC")))
d74647b0 1280 (home-page "https://fallabs.com/qdbm/")
259a94e9
TD
1281 (synopsis "Key-value database")
1282 (description "QDBM is a library of routines for managing a
1283database. The database is a simple data file containing key-value
1284pairs. Every key and value is serial bytes with variable length.
1285Binary data as well as character strings can be used as a key or a
1286value. There is no concept of data tables or data types. Records are
1287organized in a hash table or B+ tree.")
1288 (license license:lgpl2.1+)))
1289
5f96f303
LC
1290(define-public recutils
1291 (package
1292 (name "recutils")
c007e35d 1293 (version "1.8")
5f96f303
LC
1294 (source (origin
1295 (method url-fetch)
1296 (uri (string-append "mirror://gnu/recutils/recutils-"
1297 version ".tar.gz"))
1298 (sha256
1299 (base32
c007e35d 1300 "14xiln4immfsw8isnvwvq0h23f6z0wilpgsc4qzabnrzb5lsx3nz"))))
5f96f303
LC
1301 (build-system gnu-build-system)
1302
c007e35d 1303 (arguments '(#:configure-flags
b747a9db
LF
1304 (list (string-append "--with-bash-headers="
1305 (assoc-ref %build-inputs "bash:include")
c007e35d 1306 "/include/bash"))))
5f96f303 1307
535a69e9 1308 (native-inputs `(("bc" ,bc)
b747a9db 1309 ("bash:include" ,bash "include")
e1409c76 1310 ("check" ,check-0.14)
c007e35d 1311 ("pkg-config" ,pkg-config)))
5f96f303
LC
1312
1313 ;; TODO: Add more optional inputs.
5f96f303 1314 (inputs `(("curl" ,curl)
23526b67
JS
1315 ("libgcrypt" ,libgcrypt)
1316 ("libuuid" ,util-linux "lib")))
5f96f303
LC
1317 (synopsis "Manipulate plain text files as databases")
1318 (description
1319 "GNU Recutils is a set of tools and libraries for creating and
1320manipulating text-based, human-editable databases. Despite being text-based,
1321databases created with Recutils carry all of the expected features such as
c5779c93
LC
1322unique fields, primary keys, time stamps and more. Many different field
1323types are supported, as is encryption.")
ba8b9f8d 1324 (license license:gpl3+)
6fd52309 1325 (home-page "https://www.gnu.org/software/recutils/")))
5f96f303 1326
9df78675
JH
1327(define-public emacs-recutils
1328 (package
1329 (inherit recutils)
1330 (name "emacs-recutils")
1331 (build-system emacs-build-system)
1332 (arguments
1333 '(#:phases
1334 (modify-phases %standard-phases
1335 (add-after 'unpack 'change-directory
1336 (lambda _
1337 (chdir "etc")
1338 #t)))))
1339 (native-inputs '())
1340 (inputs '())
1341 (synopsis "Emacs mode for working with recutils database files")
1342 (description "This package provides an Emacs major mode @code{rec-mode}
1343for working with GNU Recutils text-based, human-editable databases. It
1344supports editing, navigation, and querying of recutils database files
1345including field and record folding.")))
1346
d3c6ad0a
MB
1347(define-public rocksdb
1348 (package
1349 (name "rocksdb")
6a0f9c87 1350 (version "6.11.4")
d3c6ad0a 1351 (source (origin
8dd36658
MB
1352 (method git-fetch)
1353 (uri (git-reference
1354 (url "https://github.com/facebook/rocksdb")
1355 (commit (string-append "v" version))))
1356 (file-name (git-file-name name version))
d3c6ad0a
MB
1357 (sha256
1358 (base32
6a0f9c87 1359 "0n19p9cd13jg0lnibrzwkxs4xlrhyj3knypkd2ic41arbds0bdnl"))
d3c6ad0a
MB
1360 (modules '((guix build utils)))
1361 (snippet
1362 '(begin
1363 ;; TODO: unbundle gtest.
1364 (delete-file "build_tools/gnu_parallel")
7fa9cca8
MB
1365 (substitute* "Makefile"
1366 (("build_tools/gnu_parallel") "parallel"))
d3c6ad0a
MB
1367 #t))))
1368 (build-system gnu-build-system)
1369 (arguments
7fa9cca8
MB
1370 `(#:make-flags (list "CC=gcc" "V=1"
1371 ;; Ceph requires that RTTI is enabled.
1372 "USE_RTTI=1"
115cd74d 1373 "date=1970-01-01" ; build reproducibly
d3c6ad0a 1374 (string-append "INSTALL_PATH="
7fa9cca8
MB
1375 (assoc-ref %outputs "out"))
1376
1377 ;; Running the full test suite takes hours and require
1378 ;; a lot of disk space. Instead we only run a subset
1379 ;; (see .travis.yml and Makefile).
1380 "ROCKSDBTESTS_END=db_tailing_iter_test")
1381 #:test-target "check_some"
d7b344c5
MB
1382 ;; Many tests fail on 32-bit platforms. There are multiple reports about
1383 ;; this upstream, but it's not going to be supported any time soon.
1384 #:tests? (let ((system ,(or (%current-target-system)
1385 (%current-system))))
1386 (or (string-prefix? "x86_64-linux" system)
1387 (string-prefix? "aarch64-linux" system)))
d3c6ad0a
MB
1388 #:phases
1389 (modify-phases %standard-phases
1390 (add-after 'unpack 'patch-Makefile
1391 (lambda _
1392 (substitute* "Makefile"
f91c677c
MB
1393 ;; Don't depend on the static library when installing.
1394 (("install: install-static")
1395 "install: install-shared")
d3c6ad0a
MB
1396 (("#!/bin/sh") (string-append "#!" (which "sh"))))
1397 #t))
1398 (delete 'configure)
d7b344c5
MB
1399 ;; The default target is only needed for tests and built on demand.
1400 (delete 'build)
1401 (add-before 'check 'disable-optimizations
1402 (lambda _
1403 ;; Prevent the build from passing '-march=native' to the compiler.
1404 (setenv "PORTABLE" "1")
1405 #t))
d3c6ad0a
MB
1406 (add-before 'check 'disable-failing-tests
1407 (lambda _
1408 (substitute* "Makefile"
1409 ;; These tests reliably fail due to "Too many open files".
1410 (("^[[:blank:]]+env_test[[:blank:]]+\\\\") "\\")
1411 (("^[[:blank:]]+persistent_cache_test[[:blank:]]+\\\\") "\\"))
1412 #t))
7fa9cca8 1413 (add-after 'check 'build
f91c677c 1414 ;; The default build target is a debug build for tests. The
7fa9cca8
MB
1415 ;; install target depends on the "shared_lib" release target
1416 ;; so we build it here for clarity.
1417 (lambda* (#:key (make-flags '()) parallel-build? #:allow-other-keys)
1418 (apply invoke "make" "shared_lib"
1419 `(,@(if parallel-build?
1420 `("-j" ,(number->string (parallel-job-count)))
1421 '())
1422 ,@make-flags)))))))
d3c6ad0a
MB
1423 (native-inputs
1424 `(("parallel" ,parallel)
1425 ("perl" ,perl)
1426 ("procps" ,procps)
77e52190
MB
1427 ("python" ,python-2)
1428 ("which" ,which)))
d3c6ad0a
MB
1429 (inputs
1430 `(("bzip2" ,bzip2)
1431 ("gflags" ,gflags)
1432 ("jemalloc" ,jemalloc)
1433 ("lz4" ,lz4)
1434 ("snappy" ,snappy)
1435 ("zlib" ,zlib)))
0087a250 1436 (home-page "https://rocksdb.org/")
d3c6ad0a
MB
1437 (synopsis "Persistent key-value store for fast storage")
1438 (description
1439 "RocksDB is a library that forms the core building block for a fast
1440key-value server, especially suited for storing data on flash drives. It
1441has a @dfn{Log-Structured-Merge-Database} (LSM) design with flexible tradeoffs
1442between @dfn{Write-Amplification-Factor} (WAF), @dfn{Read-Amplification-Factor}
1443(RAF) and @dfn{Space-Amplification-Factor} (SAF). It has multi-threaded
1444compactions, making it specially suitable for storing multiple terabytes of
1445data in a single database. RocksDB is partially based on @code{LevelDB}.")
7fa9cca8
MB
1446 ;; RocksDB is dual licensed under GPL2 and ASL 2.0. Some header
1447 ;; files carry the 3-clause BSD license.
1448 (license (list license:gpl2 license:asl2.0 license:bsd-3))))
d3c6ad0a 1449
b92d02d9
RJ
1450(define-public sparql-query
1451 (package
1452 (name "sparql-query")
1453 (version "1.1")
1454 (source (origin
ce64b9d1
EF
1455 (method git-fetch)
1456 (uri (git-reference
1457 (url "https://github.com/tialaramex/sparql-query")
1458 (commit version)))
b92d02d9 1459 (sha256
ce64b9d1
EF
1460 (base32 "0a84a89idpjhj9w2y3fmvzv7ldps1cva1kxvfmh897k02kaniwxk"))
1461 (file-name (git-file-name name version))))
b92d02d9
RJ
1462 (build-system gnu-build-system)
1463 (inputs
6914eea0 1464 `(("curl" ,curl)
b92d02d9
RJ
1465 ("glib" ,glib)
1466 ("libxml2" ,libxml2)
6914eea0
EF
1467 ("ncurses" ,ncurses)
1468 ("readline" ,readline)))
b92d02d9
RJ
1469 (native-inputs
1470 `(("pkg-config" ,pkg-config)))
1471 (arguments
1472 `(#:make-flags '("CC=gcc")
1473 #:phases
1474 (modify-phases %standard-phases
1475 (delete 'configure)
1476 ;; The Makefile uses git to obtain versioning information. This phase
1477 ;; substitutes the git invocation with the package version.
1478 (add-after 'unpack 'remove-git-dependency
1479 (lambda _
1480 (substitute* "Makefile"
1481 (("^gitrev :=.*$")
96272e28
MW
1482 (string-append "gitrev = \"v" ,version "\"")))
1483 #t))
b92d02d9
RJ
1484 ;; The install phase of the Makefile assumes $PREFIX/usr/local/bin.
1485 ;; This replacement does the same thing, except for using $PREFIX/bin
1486 ;; instead.
1487 (replace 'install
1488 (lambda* (#:key outputs #:allow-other-keys)
1489 (let* ((out (assoc-ref outputs "out"))
1490 (bin (string-append out "/bin")))
1491 (install-file "sparql-query" bin)
96272e28
MW
1492 (symlink (string-append bin "/sparql-query")
1493 (string-append bin "/sparql-update")))
1494 #t))
b92d02d9
RJ
1495 (replace 'check
1496 (lambda* (#:key make-flags #:allow-other-keys)
96272e28
MW
1497 (apply invoke "make" `(,@make-flags "scan-test"))
1498 (invoke "./scan-test"))))))
b92d02d9
RJ
1499 (home-page "https://github.com/tialaramex/sparql-query/")
1500 (synopsis "Command-line tool for accessing SPARQL endpoints over HTTP")
1501 (description "Sparql-query is a command-line tool for accessing SPARQL
36a4366d 1502endpoints over HTTP. It has been intentionally designed to @code{feel} similar to
b92d02d9
RJ
1503tools for interrogating SQL databases. For example, you can enter a query over
1504several lines, using a semi-colon at the end of a line to indicate the end of
1505your query. It also supports readline so that you can more easily recall and
1506edit previous queries, even across sessions. It can be used non-interactively,
1507for example from a shell script.")
1508 ;; Some files (like scan-sparql.c) contain a GPLv3+ license header, while
1509 ;; others (like sparql-query.c) contain a GPLv2+ license header.
ba8b9f8d 1510 (license (list license:gpl3+))))
b92d02d9 1511
cabe8f18
CB
1512(define-public sqitch
1513 (package
1514 (name "sqitch")
adcad547 1515 (version "1.1.0")
cabe8f18
CB
1516 (source
1517 (origin
1518 (method url-fetch)
1519 (uri (string-append
f64cd5d1
TGR
1520 "mirror://cpan/authors/id/D/DW/DWHEELER/App-Sqitch-v"
1521 version ".tar.gz"))
cabe8f18 1522 (sha256
adcad547 1523 (base32 "1ayiwg9kh3w0nbacbcln7h944z94vq5vnnd5diz86033bpbnq57f"))))
cabe8f18
CB
1524 (build-system perl-build-system)
1525 (arguments
1526 '(#:phases
1527 (modify-phases %standard-phases
1528 (add-before 'check 'set-check-environment
1529 (lambda _
1530 (setenv "TZ" "UTC")
1531 (setenv "HOME" "/tmp")
1532 #t))
1533 (add-after 'install 'wrap-program
1534 (lambda* (#:key outputs #:allow-other-keys)
1535 (let* ((out (assoc-ref outputs "out"))
1536 (path (getenv "PERL5LIB")))
1537 (wrap-program (string-append out "/bin/sqitch")
1538 `("PERL5LIB" ":" prefix
1539 (,(string-append out "/lib/perl5/site_perl"
1540 ":"
1541 path)))))
1542 #t)))))
1543 (native-inputs
1544 `(("perl-capture-tiny" ,perl-capture-tiny)
1545 ("perl-io-pager" ,perl-io-pager)
1546 ("perl-module-build" ,perl-module-build)
1547 ("perl-module-runtime" ,perl-module-runtime)
1548 ("perl-path-class" ,perl-path-class)
1549 ("perl-test-deep" ,perl-test-deep)
1550 ("perl-test-dir" ,perl-test-dir)
1551 ("perl-test-exception" ,perl-test-exception)
1552 ("perl-test-file" ,perl-test-file)
1553 ("perl-test-file-contents" ,perl-test-file-contents)
1554 ("perl-test-mockmodule" ,perl-test-mockmodule)
adcad547 1555 ("perl-test-mockobject" ,perl-test-mockobject)
cabe8f18
CB
1556 ("perl-test-nowarnings" ,perl-test-nowarnings)
1557 ("perl-test-warn" ,perl-test-warn)))
1558 (inputs
1559 `(("perl-class-xsaccessor" ,perl-class-xsaccessor)
1560 ("perl-clone" ,perl-clone)
1561 ("perl-config-gitlike" ,perl-config-gitlike)
1562 ("perl-datetime" ,perl-datetime)
1563 ("perl-datetime-timezone" ,perl-datetime-timezone)
6a1c3a90 1564 ("perl-dbd-mysql" ,perl-dbd-mysql)
cabe8f18 1565 ("perl-dbd-pg" ,perl-dbd-pg)
6a1c3a90 1566 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
cabe8f18
CB
1567 ("perl-dbi" ,perl-dbi)
1568 ("perl-devel-stacktrace" ,perl-devel-stacktrace)
1569 ("perl-encode-locale" ,perl-encode-locale)
cabe8f18
CB
1570 ("perl-hash-merge" ,perl-hash-merge)
1571 ("perl-ipc-run3" ,perl-ipc-run3)
1572 ("perl-ipc-system-simple" ,perl-ipc-system-simple)
1573 ("perl-libintl-perl" ,perl-libintl-perl)
1574 ("perl-list-moreutils" ,perl-list-moreutils)
1575 ("perl-moo" ,perl-moo)
1576 ("perl-mysql-config" ,perl-mysql-config)
1577 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
1578 ("perl-path-class" ,perl-path-class)
1579 ("perl-perlio-utf8_strict" ,perl-perlio-utf8_strict)
1580 ("perl-string-formatter" ,perl-string-formatter)
1581 ("perl-string-shellquote" ,perl-string-shellquote)
1582 ("perl-sub-exporter" ,perl-sub-exporter)
1583 ("perl-template-tiny" ,perl-template-tiny)
1584 ("perl-template-toolkit" ,perl-template-toolkit)
1585 ("perl-throwable" ,perl-throwable)
1586 ("perl-try-tiny" ,perl-try-tiny)
1587 ("perl-type-tiny" ,perl-type-tiny)
1588 ("perl-type-tiny-xs" ,perl-type-tiny-xs)
1589 ("perl-uri" ,perl-uri)
1590 ("perl-uri-db" ,perl-uri-db)))
1591 (home-page "https://sqitch.org/")
1592 (synopsis "Database change management tool")
1593 (description
1594 "Sqitch is a standalone change management system for database schemas,
1595which uses SQL to describe changes.")
1596 (license license:x11)))
1597
311f06c9
TGR
1598(define-public sqlcrush
1599 ;; Unfortunately, there is no proper upstream release and may never be.
1600 (let ((commit "b5f6868f189566a26eecc78d0f0659813c1aa98a")
1601 (revision "1"))
1602 (package
1603 (name "sqlcrush")
1604 (version (git-version "0.1.5" revision commit))
1605 (source (origin
1606 (method git-fetch)
1607 (uri (git-reference
b0e7b699 1608 (url "https://github.com/coffeeandscripts/sqlcrush")
311f06c9
TGR
1609 (commit commit)))
1610 (file-name (git-file-name name version))
1611 (sha256
1612 (base32
1613 "0x3wy40r93p0jv3nbwj9a77wa4ff697d13r0wffmm7q9h3mzsww8"))))
1614 (build-system python-build-system)
1615 (inputs
1616 `(("python-cryptography" ,python-cryptography)
1617 ("python-psycopg2" ,python-psycopg2)
1618 ("python-pymysql" ,python-pymysql)
1619 ("python-sqlalchemy" ,python-sqlalchemy)))
1620 (home-page "https://github.com/coffeeandscripts/sqlcrush")
1621 (synopsis "Text console-based database viewer and editor")
1622 (description
1623 "SQLcrush lets you view and edit a database directly from the text
1624console through an ncurses interface. You can explore each table's structure,
1625browse and edit the contents, add and delete entries, all while tracking your
1626changes.")
1627 (license license:gpl3+)))) ; no headers, see README.md
1628
db60b1d9
LC
1629(define-public tdb
1630 (package
1631 (name "tdb")
10f004f0 1632 (version "1.4.3")
db60b1d9
LC
1633 (source (origin
1634 (method url-fetch)
ca473fc2 1635 (uri (string-append "https://www.samba.org/ftp/tdb/tdb-"
db60b1d9
LC
1636 version ".tar.gz"))
1637 (sha256
1638 (base32
10f004f0 1639 "06waz0k50c7v3chd08mzp2rv7w4k4q9isbxx3vhlfpx1vy9q61f8"))))
db60b1d9
LC
1640 (build-system gnu-build-system)
1641 (arguments
6ccb7814
EF
1642 '(#:phases
1643 (modify-phases %standard-phases
1644 (replace 'configure
1645 (lambda* (#:key outputs #:allow-other-keys)
1646 (let ((out (assoc-ref outputs "out")))
1647 ;; The 'configure' script is a wrapper for Waf and
1648 ;; doesn't recognize things like '--enable-fast-install'.
96272e28
MW
1649 (invoke "./configure"
1650 (string-append "--prefix=" out))))))))
db60b1d9
LC
1651 (native-inputs
1652 `(;; TODO: Build the documentation.
1653 ;; ("docbook-xsl" ,docbook-xsl)
1654 ;; ("libxml2" ,libxml2)
1655 ;; ("libxslt" ,libxslt)
97dcedbd
MB
1656 ("python" ,python) ;for the Waf build system
1657 ("which" ,which)))
1abd0904 1658 (home-page "https://tdb.samba.org/")
35b9e423 1659 (synopsis "Trivial database")
db60b1d9
LC
1660 (description
1661 "TDB is a Trivial Database. In concept, it is very much like GDBM,
1662and BSD's DB except that it allows multiple simultaneous writers and uses
1663locking internally to keep writers from trampling on each other. TDB is also
1664extremely small.")
ba8b9f8d 1665 (license license:lgpl3+)))
274da61d
LC
1666
1667(define-public perl-dbi
1668 (package
1669 (name "perl-dbi")
d0ed680b 1670 (version "1.643")
274da61d
LC
1671 (source (origin
1672 (method url-fetch)
1673 (uri (string-append
1674 "mirror://cpan/authors/id/T/TI/TIMB/DBI-"
1675 version ".tar.gz"))
1676 (sha256
1677 (base32
d0ed680b 1678 "1yinx39960y241vf2sknxj0dfz82a5m9gvklq5rw78k0nlyrjawa"))))
274da61d
LC
1679 (build-system perl-build-system)
1680 (synopsis "Database independent interface for Perl")
1681 (description "This package provides an database interface for Perl.")
9aba9b12 1682 (home-page "https://metacpan.org/release/DBI")
2f3108ad 1683 (license license:perl-license)))
274da61d 1684
feae3395
EB
1685(define-public perl-dbix-class
1686 (package
1687 (name "perl-dbix-class")
23ec2a0e 1688 (version "0.082842")
feae3395
EB
1689 (source
1690 (origin
1691 (method url-fetch)
1692 (uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
1693 "DBIx-Class-" version ".tar.gz"))
1694 (sha256
23ec2a0e 1695 (base32 "1rh7idjjbibc1zmiaaarask434lh0lx7f2xyfwmy37k9fa0xcpmh"))))
feae3395
EB
1696 (build-system perl-build-system)
1697 (native-inputs
1698 `(("perl-dbd-sqlite" ,perl-dbd-sqlite)
1699 ("perl-file-temp" ,perl-file-temp)
2f837cf7 1700 ("perl-module-install" ,perl-module-install)
feae3395
EB
1701 ("perl-package-stash" ,perl-package-stash)
1702 ("perl-test-deep" ,perl-test-deep)
1703 ("perl-test-exception" ,perl-test-exception)
1704 ("perl-test-warn" ,perl-test-warn)))
1705 (propagated-inputs
1706 `(("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
1707 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
1708 ("perl-class-inspector" ,perl-class-inspector)
1709 ("perl-config-any" ,perl-config-any)
1710 ("perl-context-preserve" ,perl-context-preserve)
1711 ("perl-data-dumper-concise" ,perl-data-dumper-concise)
1712 ("perl-data-page" ,perl-data-page)
1713 ("perl-dbi" ,perl-dbi)
1714 ("perl-devel-globaldestruction" ,perl-devel-globaldestruction)
1715 ("perl-hash-merge" ,perl-hash-merge)
1716 ("perl-module-find" ,perl-module-find)
1717 ("perl-moo" ,perl-moo)
1718 ("perl-mro-compat" ,perl-mro-compat)
1719 ("perl-namespace-clean" ,perl-namespace-clean)
1720 ("perl-path-class" ,perl-path-class)
1721 ("perl-scalar-list-utils" ,perl-scalar-list-utils)
1722 ("perl-scope-guard" ,perl-scope-guard)
23ec2a0e 1723 ("perl-sql-abstract-classic" ,perl-sql-abstract-classic)
feae3395
EB
1724 ("perl-sub-name" ,perl-sub-name)
1725 ("perl-text-balanced" ,perl-text-balanced)
1726 ("perl-try-tiny" ,perl-try-tiny)))
9aba9b12 1727 (home-page "https://metacpan.org/release/DBIx-Class")
feae3395
EB
1728 (synopsis "Extensible and flexible object <-> relational mapper")
1729 (description "An SQL to OO mapper with an object API inspired by
1730Class::DBI (with a compatibility layer as a springboard for porting) and a
1731resultset API that allows abstract encapsulation of database operations. It
1732aims to make representing queries in your code as perl-ish as possible while
1733still providing access to as many of the capabilities of the database as
1734possible, including retrieving related records from multiple tables in a
1735single query, \"JOIN\", \"LEFT JOIN\", \"COUNT\", \"DISTINCT\", \"GROUP BY\",
1736\"ORDER BY\" and \"HAVING\" support.")
2f3108ad 1737 (license license:perl-license)))
e61fd0f0 1738
4e4039e5
EB
1739(define-public perl-dbix-class-cursor-cached
1740 (package
1741 (name "perl-dbix-class-cursor-cached")
180cb81b 1742 (version "1.001004")
4e4039e5
EB
1743 (source
1744 (origin
1745 (method url-fetch)
1746 (uri (string-append "mirror://cpan/authors/id/A/AR/ARCANEZ/"
1747 "DBIx-Class-Cursor-Cached-" version ".tar.gz"))
1748 (sha256
1749 (base32
180cb81b 1750 "09b2jahn2x12qm4f7qm1jzsxbz7qn1czp6a3fnl5l2i3l4r5421p"))))
4e4039e5
EB
1751 (build-system perl-build-system)
1752 (native-inputs
1753 `(("perl-cache-cache" ,perl-cache-cache)
2f837cf7
MB
1754 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1755 ("perl-module-install" ,perl-module-install)))
4e4039e5
EB
1756 (propagated-inputs
1757 `(("perl-carp-clan" ,perl-carp-clan)
1758 ("perl-dbix-class" ,perl-dbix-class)))
9aba9b12 1759 (home-page "https://metacpan.org/release/DBIx-Class-Cursor-Cached")
4e4039e5
EB
1760 (synopsis "Cursor with built-in caching support")
1761 (description "DBIx::Class::Cursor::Cached provides a cursor class with
1762built-in caching support.")
2f3108ad 1763 (license license:perl-license)))
4e4039e5 1764
e61fd0f0
EB
1765(define-public perl-dbix-class-introspectablem2m
1766 (package
1767 (name "perl-dbix-class-introspectablem2m")
7a462b80 1768 (version "0.001002")
e61fd0f0
EB
1769 (source
1770 (origin
1771 (method url-fetch)
68a9d6df 1772 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
e61fd0f0
EB
1773 "DBIx-Class-IntrospectableM2M-" version ".tar.gz"))
1774 (sha256
1775 (base32
7a462b80 1776 "1w47rh2241iy5x3a9bqsyd5kdp9sk43dksr99frzv4qn4jsazfn6"))))
e61fd0f0 1777 (build-system perl-build-system)
2f837cf7
MB
1778 (native-inputs
1779 `(("perl-module-install" ,perl-module-install)))
e61fd0f0
EB
1780 (propagated-inputs
1781 `(("perl-dbix-class" ,perl-dbix-class)))
9aba9b12 1782 (home-page "https://metacpan.org/release/DBIx-Class-IntrospectableM2M")
e61fd0f0
EB
1783 (synopsis "Introspect many-to-many relationships")
1784 (description "Because the many-to-many relationships are not real
1785relationships, they can not be introspected with DBIx::Class. Many-to-many
1786relationships are actually just a collection of convenience methods installed
1787to bridge two relationships. This DBIx::Class component can be used to store
1788all relevant information about these non-relationships so they can later be
1789introspected and examined.")
2f3108ad 1790 (license license:perl-license)))
708155df
EB
1791
1792(define-public perl-dbix-class-schema-loader
1793 (package
1794 (name "perl-dbix-class-schema-loader")
1672e7e7 1795 (version "0.07049")
708155df
EB
1796 (source
1797 (origin
1798 (method url-fetch)
1799 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
1800 "DBIx-Class-Schema-Loader-" version ".tar.gz"))
1801 (sha256
1802 (base32
1672e7e7 1803 "0r57fv71ypxafb85cpxph1hdqii7ipjwvc19yb6fpkvq2ggcssg8"))))
708155df
EB
1804 (build-system perl-build-system)
1805 (native-inputs
1806 `(("perl-config-any" ,perl-config-any)
1807 ("perl-config-general" ,perl-config-general)
1808 ("perl-dbd-sqlite" ,perl-dbd-sqlite)
1809 ("perl-dbix-class-introspectablem2m" ,perl-dbix-class-introspectablem2m)
2f837cf7 1810 ("perl-module-install" ,perl-module-install)
708155df
EB
1811 ("perl-moose" ,perl-moose)
1812 ("perl-moosex-markasmethods" ,perl-moosex-markasmethods)
1813 ("perl-moosex-nonmoose" ,perl-moosex-nonmoose)
1814 ("perl-namespace-autoclean" ,perl-namespace-autoclean)
1815 ("perl-test-deep" ,perl-test-deep)
1816 ("perl-test-differences" ,perl-test-differences)
1817 ("perl-test-exception" ,perl-test-exception)
1818 ("perl-test-pod" ,perl-test-pod)
1819 ("perl-test-warn" ,perl-test-warn)))
1820 (propagated-inputs
1821 `(("perl-class-unload" ,perl-class-unload)
1822 ("perl-class-inspector" ,perl-class-inspector)
1823 ("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
1824 ("perl-class-c3-componentised" ,perl-class-c3-componentised)
1825 ("perl-carp-clan" ,perl-carp-clan)
1826 ("perl-data-dump" ,perl-data-dump)
1827 ("perl-dbix-class" ,perl-dbix-class)
1828 ("perl-hash-merge" ,perl-hash-merge)
1829 ("perl-list-moreutils" ,perl-list-moreutils)
1830 ("perl-lingua-en-inflect-phrase" ,perl-lingua-en-inflect-phrase)
1831 ("perl-lingua-en-inflect-number" ,perl-lingua-en-inflect-number)
1832 ("perl-lingua-en-tagger" ,perl-lingua-en-tagger)
1833 ("perl-namespace-clean" ,perl-namespace-clean)
1834 ("perl-mro-compat" ,perl-mro-compat)
1835 ("perl-scope-guard" ,perl-scope-guard)
1836 ("perl-string-camelcase" ,perl-string-camelcase)
1837 ("perl-string-toidentifier-en" ,perl-string-toidentifier-en)
1838 ("perl-sub-name" ,perl-sub-name)
1839 ("perl-try-tiny" ,perl-try-tiny)))
1840 (arguments `(#:tests? #f)) ;TODO: t/20invocations.t fails
9aba9b12 1841 (home-page "https://metacpan.org/release/DBIx-Class-Schema-Loader")
708155df
EB
1842 (synopsis "Create a DBIx::Class::Schema based on a database")
1843 (description "DBIx::Class::Schema::Loader automates the definition of a
1844DBIx::Class::Schema by scanning database table definitions and setting up the
1845columns, primary keys, unique constraints and relationships.")
2f3108ad 1846 (license license:perl-license)))
274da61d 1847
186eb132
EB
1848(define-public perl-dbd-pg
1849 (package
1850 (name "perl-dbd-pg")
8c078dde 1851 (version "3.7.4")
186eb132
EB
1852 (source
1853 (origin
1854 (method url-fetch)
1855 (uri (string-append "mirror://cpan/authors/id/T/TU/TURNSTEP/"
1856 "DBD-Pg-" version ".tar.gz"))
1857 (sha256
1858 (base32
8c078dde 1859 "0gkqlvbmzbdm0g4k328nlkjdg3wrjm5i2n9jxj1i8sqxkm79rylz"))))
186eb132
EB
1860 (build-system perl-build-system)
1861 (native-inputs
1862 `(("perl-dbi" ,perl-dbi)))
1863 (propagated-inputs
1864 `(("perl-dbi" ,perl-dbi)
1865 ("postgresql" ,postgresql)))
9aba9b12 1866 (home-page "https://metacpan.org/release/DBD-Pg")
186eb132 1867 (synopsis "DBI PostgreSQL interface")
f33e71fc
LC
1868 (description "This package provides a PostgreSQL driver for the Perl5
1869@dfn{Database Interface} (DBI).")
2f3108ad 1870 (license license:perl-license)))
186eb132 1871
4b7857a4
RW
1872(define-public perl-dbd-mysql
1873 (package
1874 (name "perl-dbd-mysql")
49596a54 1875 (version "4.050")
4b7857a4
RW
1876 (source
1877 (origin
1878 (method url-fetch)
49596a54 1879 (uri (string-append "mirror://cpan/authors/id/D/DV/DVEEDEN/"
4b7857a4
RW
1880 "DBD-mysql-" version ".tar.gz"))
1881 (sha256
49596a54 1882 (base32 "0y4djb048i09dk19av7mzfb3khr72vw11p3ayw2p82jsy4gm8j2g"))))
4b7857a4 1883 (build-system perl-build-system)
702a87f2
TGR
1884 (arguments
1885 `(#:phases
1886 (modify-phases %standard-phases
1887 (add-before 'configure 'skip-library-detection
1888 ;; Avoid depencies on perl-devel-checklib, openssl, and zlib. They
1889 ;; are really only needed for the test suite; their absence does not
1890 ;; affect the build or the end result.
1891 (lambda _
1892 (substitute* "Makefile.PL"
1893 (("use Devel::CheckLib;" match)
1894 (string-append "# " match))
1895 (("assert_lib")
1896 "print"))
1897 #t)))
1898 ;; Tests require running MySQL server.
1899 #:tests? #f))
4b7857a4
RW
1900 (propagated-inputs
1901 `(("perl-dbi" ,perl-dbi)
2b8491fb
JL
1902 ("mysql" ,mariadb "lib")
1903 ("mysql-dev" ,mariadb "dev")))
9aba9b12 1904 (home-page "https://metacpan.org/release/DBD-mysql")
4b7857a4
RW
1905 (synopsis "DBI MySQL interface")
1906 (description "This package provides a MySQL driver for the Perl5
1907@dfn{Database Interface} (DBI).")
2f3108ad 1908 (license license:perl-license)))
4b7857a4 1909
274da61d
LC
1910(define-public perl-dbd-sqlite
1911 (package
1912 (name "perl-dbd-sqlite")
25fb1e30 1913 (version "1.66")
274da61d
LC
1914 (source (origin
1915 (method url-fetch)
1916 (uri (string-append
1917 "mirror://cpan/authors/id/I/IS/ISHIGAKI/DBD-SQLite-"
1918 version ".tar.gz"))
1919 (sha256
1920 (base32
25fb1e30 1921 "1zljln5nh61gj3k22a1fv2vhx5l83waizmarwkh77hk6kzzmvrw9"))))
274da61d
LC
1922 (build-system perl-build-system)
1923 (inputs `(("sqlite" ,sqlite)))
1924 (propagated-inputs `(("perl-dbi" ,perl-dbi)))
1925 (synopsis "SQlite interface for Perl")
1926 (description "DBD::SQLite is a Perl DBI driver for SQLite, that includes
1927the entire thing in the distribution. So in order to get a fast transaction
1928capable RDBMS working for your Perl project you simply have to install this
1929module, and nothing else.")
2f3108ad 1930 (license license:perl-license)
9aba9b12 1931 (home-page "https://metacpan.org/release/DBD-SQLite")))
14e84b2d 1932
55916fa2
CB
1933(define-public perl-mysql-config
1934 (package
1935 (name "perl-mysql-config")
1936 (version "1.04")
1937 (source
1938 (origin
1939 (method url-fetch)
1940 (uri (string-append
1941 "mirror://cpan/authors/id/D/DA/DARREN/MySQL-Config-"
1942 version
1943 ".tar.gz"))
1944 (sha256
1945 (base32
1946 "1svn7ccw2gc4cazvc58j84rxhnc9vs01zpird0l8460598j475qr"))))
1947 (build-system perl-build-system)
1948 (home-page "https://metacpan.org/release/MySQL-Config")
1949 (synopsis "Parse and utilize MySQL's /etc/my.cnf and ~/.my.cnf files")
1950 (description
1951 "@code{MySQL::Config} emulates the @code{load_defaults} function from
7230f6d5 1952libmysqlclient. It will fill an array with long options, ready to be parsed by
55916fa2
CB
1953@code{Getopt::Long}.")
1954 (license license:perl-license)))
1955
dd90952e
EB
1956(define-public perl-sql-abstract
1957 (package
1958 (name "perl-sql-abstract")
7a358c78 1959 (version "1.87")
dd90952e
EB
1960 (source
1961 (origin
1962 (method url-fetch)
439980b7 1963 (uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
dd90952e
EB
1964 "SQL-Abstract-" version ".tar.gz"))
1965 (sha256
7a358c78 1966 (base32 "0jhw91b23wc9bkfwcgvka4x5ddxk58m9bcp5ay7a3vx77nla09p9"))))
dd90952e
EB
1967 (build-system perl-build-system)
1968 (native-inputs
9dab5017
MB
1969 `(("perl-module-install" ,perl-module-install)
1970 ("perl-test-deep" ,perl-test-deep)
dd90952e
EB
1971 ("perl-test-exception" ,perl-test-exception)
1972 ("perl-test-warn" ,perl-test-warn)))
1973 (propagated-inputs
1974 `(("perl-hash-merge" ,perl-hash-merge)
1975 ("perl-moo" ,perl-moo)
1976 ("perl-mro-compat" ,perl-mro-compat)
1977 ("perl-text-balanced" ,perl-text-balanced)))
9aba9b12 1978 (home-page "https://metacpan.org/release/SQL-Abstract")
dd90952e
EB
1979 (synopsis "Generate SQL from Perl data structures")
1980 (description "This module was inspired by the excellent DBIx::Abstract.
1981While based on the concepts used by DBIx::Abstract, the concepts used have
1982been modified to make the SQL easier to generate from Perl data structures.
1983The underlying idea is for this module to do what you mean, based on the data
1984structures you provide it, so that you don't have to modify your code every
e881752c 1985time your data changes.")
2f3108ad 1986 (license license:perl-license)))
14e84b2d 1987
5d01aeba
TGR
1988(define-public perl-sql-abstract-classic
1989 (package
1990 (name "perl-sql-abstract-classic")
1991 (version "1.91")
1992 (source
1993 (origin
1994 (method url-fetch)
1995 (uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
1996 "SQL-Abstract-Classic-" version ".tar.gz"))
1997 (sha256
1998 (base32 "0a7g13hs3kdxrjn43sfli09mgsi9d6w0dfw6hlk268av17yisgaf"))))
1999 (build-system perl-build-system)
2000 (native-inputs
2001 `(("perl-test-deep" ,perl-test-deep)
2002 ("perl-test-exception" ,perl-test-exception)
2003 ("perl-test-warn" ,perl-test-warn)))
2004 (propagated-inputs
2005 `(("perl-mro-compat" ,perl-mro-compat)
2006 ("perl-sql-abstract" ,perl-sql-abstract)))
2007 (home-page "https://metacpan.org/release/SQL-Abstract-Classic")
2008 (synopsis "Generate SQL from Perl data structures")
2009 (description
2010 "This module is nearly identical to @code{SQL::Abstract} 1.81, and exists
2011to preserve the ability of users to opt into the new way of doing things in
2012later versions according to their own schedules.
2013
2014It is an abstract SQL generation module based on the concepts used by
2015@code{DBIx::Abstract}, with several important differences, especially when it
2016comes to @code{WHERE} clauses. These concepts were modified to make the SQL
2017easier to generate from Perl data structures.
2018
2019The underlying idea is for this module to do what you mean, based on the data
2020structures you provide it. You shouldn't have to modify your code every time
2021your data changes, as this module figures it out.")
2022 (license license:perl-license)))
2023
b4dcb026
EB
2024(define-public perl-sql-splitstatement
2025 (package
2026 (name "perl-sql-splitstatement")
2027 (version "1.00020")
2028 (source
2029 (origin
2030 (method url-fetch)
2031 (uri (string-append "mirror://cpan/authors/id/E/EM/EMAZEP/"
2032 "SQL-SplitStatement-" version ".tar.gz"))
2033 (sha256
2034 (base32
2035 "0bqg45k4c9qkb2ypynlwhpvzsl4ssfagmsalys18s5c79ps30z7p"))))
2036 (build-system perl-build-system)
2037 (native-inputs
2038 `(("perl-test-exception" ,perl-test-exception)))
2039 (propagated-inputs
2040 `(("perl-class-accessor" ,perl-class-accessor)
2041 ("perl-list-moreutils" ,perl-list-moreutils)
2042 ("perl-regexp-common" ,perl-regexp-common)
2043 ("perl-sql-tokenizer" ,perl-sql-tokenizer)))
9aba9b12 2044 (home-page "https://metacpan.org/release/SQL-SplitStatement")
b4dcb026
EB
2045 (synopsis "Split SQL code into atomic statements")
2046 (description "This module tries to split any SQL code, even including
2047non-standard extensions, into the atomic statements it is composed of.")
2f3108ad 2048 (license license:perl-license)))
b4dcb026 2049
718c89c1
EB
2050(define-public perl-sql-tokenizer
2051 (package
2052 (name "perl-sql-tokenizer")
2053 (version "0.24")
2054 (source
2055 (origin
2056 (method url-fetch)
2057 (uri (string-append "mirror://cpan/authors/id/I/IZ/IZUT/"
2058 "SQL-Tokenizer-" version ".tar.gz"))
2059 (sha256
2060 (base32
2061 "1qa2dfbzdlr5qqdam9yn78z5w3al5r8577x06qan8wv58ay6ka7s"))))
2062 (build-system perl-build-system)
9aba9b12 2063 (home-page "https://metacpan.org/release/SQL-Tokenizer")
718c89c1
EB
2064 (synopsis "SQL tokenizer")
2065 (description "SQL::Tokenizer is a tokenizer for SQL queries. It does not
2066claim to be a parser or query verifier. It just creates sane tokens from a
2067valid SQL query.")
2f3108ad 2068 (license license:perl-license)))
718c89c1 2069
14e84b2d
JD
2070(define-public unixodbc
2071 (package
2072 (name "unixodbc")
4712fdd8 2073 (version "2.3.9")
14e84b2d
JD
2074 (source (origin
2075 (method url-fetch)
e881752c 2076 (uri
14e84b2d 2077 (string-append
3fef0a2f
EF
2078 "ftp://ftp.unixodbc.org/pub/unixODBC/unixODBC-"
2079 version ".tar.gz"))
14e84b2d 2080 (sha256
4712fdd8 2081 (base32 "01xj65d02i3yjy7p9z08y9jakcs5szmz4rask868n7387nn3x0sj"))))
14e84b2d
JD
2082 (build-system gnu-build-system)
2083 (synopsis "Data source abstraction library")
2084 (description "Unixodbc is a library providing an API with which to access
2085data sources. Data sources include SQL Servers and any software with an ODBC
2086Driver.")
ba8b9f8d 2087 (license license:lgpl2.1+)
14e84b2d
JD
2088 ;; COPYING contains copy of lgpl2.1 - but copyright notices just say "LGPL"
2089 (home-page "http://www.unixodbc.org")))
b4a9c924
EB
2090
2091(define-public unqlite
2092 (package
2093 (name "unqlite")
2094 (version "1.1.6")
2095 (source (origin
2096 (method url-fetch)
2097 ;; Contains bug fixes against the official release, and has an
2098 ;; autotooled build system.
2099 (uri (string-append "https://github.com/aidin36/tocc/releases/"
2100 "download/v1.0.0/"
2101 "unqlite-unofficial-" version ".tar.gz"))
2102 (sha256
2103 (base32
2104 "1sbpvhg15gadq0mpcy16q7k3rkg4b4dicpnn5xifpkpn02sqik3s"))))
2105 (build-system gnu-build-system)
2106 (arguments `(#:tests? #f)) ;No check target
f50ef349 2107 (home-page "https://www.unqlite.org")
b4a9c924
EB
2108 (synopsis "In-memory key/value and document store")
2109 (description
2110 "UnQLite is an in-process software library which implements a
2111self-contained, serverless, zero-configuration, transactional NoSQL
2112database engine. UnQLite is a document store database similar to
2113MongoDB, Redis, CouchDB, etc. as well as a standard Key/Value store
69b4ffcf 2114similar to BerkeleyDB, LevelDB, etc.")
ba8b9f8d 2115 (license license:bsd-2)))
463f6766
DT
2116
2117(define-public redis
2118 (package
2119 (name "redis")
84032506 2120 (version "5.0.7")
463f6766
DT
2121 (source (origin
2122 (method url-fetch)
2123 (uri (string-append "http://download.redis.io/releases/redis-"
2124 version".tar.gz"))
2125 (sha256
2126 (base32
84032506 2127 "0ax8sf3vw0yadr41kzc04917scrg5wir1d94zmbz00b8pzm79nv1"))))
463f6766
DT
2128 (build-system gnu-build-system)
2129 (arguments
2130 '(#:tests? #f ; tests related to master/slave and replication fail
2131 #:phases (modify-phases %standard-phases
2132 (delete 'configure))
2133 #:make-flags `("CC=gcc"
2134 "MALLOC=libc"
b25f060f 2135 "LDFLAGS=-ldl"
463f6766
DT
2136 ,(string-append "PREFIX="
2137 (assoc-ref %outputs "out")))))
2138 (synopsis "Key-value cache and store")
2139 (description "Redis is an advanced key-value cache and store. Redis
2140supports many data structures including strings, hashes, lists, sets, sorted
2141sets, bitmaps and hyperloglogs.")
5a3cbfce 2142 (home-page "https://redis.io/")
ba8b9f8d 2143 (license license:bsd-3)))
a65e2a02 2144
2145(define-public kyotocabinet
2146 (package
2147 (name "kyotocabinet")
9f304362 2148 (version "1.2.78")
a65e2a02 2149 (source (origin
2150 (method url-fetch)
7fc2ba2a
TGR
2151 (uri (string-append "https://fallabs.com/kyotocabinet/pkg/"
2152 "kyotocabinet-" version ".tar.gz"))
a65e2a02 2153 (sha256
2154 (base32
9f304362 2155 "1bxkf9kmcavq9rqridb8mvmrk3hj4447ffi24m2admsbm61n6k29"))))
a65e2a02 2156 (build-system gnu-build-system)
2157 (arguments
2158 `(#:configure-flags
2159 (list
9d59023e 2160 "--disable-opt" ;"-march=native". XXX this also turns off -O0.
a65e2a02 2161 (string-append "LDFLAGS=-Wl,-rpath="
2162 (assoc-ref %outputs "out") "/lib"))))
2163 (inputs `(("zlib" ,zlib)))
7fc2ba2a 2164 (home-page "https://fallabs.com/kyotocabinet/")
a65e2a02 2165 (synopsis
2166 "Kyoto Cabinet is a modern implementation of the DBM database")
2167 (description
2168 "Kyoto Cabinet is a standalone file-based database that supports Hash
2169and B+ Tree data storage models. It is a fast key-value lightweight
2170database and supports many programming languages. It is a NoSQL database.")
ba8b9f8d 2171 (license license:gpl3+)))
6242b314 2172
bdc11dc4 2173(define-public tokyocabinet
2174 (package
2175 (name "tokyocabinet")
2176 (version "1.4.48")
2177 (source
2178 (origin
2179 (method url-fetch)
2180 (uri (string-append "http://fallabs.com/tokyocabinet/"
2181 name "-" version ".tar.gz"))
2182 (sha256
2183 (base32
2184 "140zvr0n8kvsl0fbn2qn3f2kh3yynfwnizn4dgbj47m975yg80x0"))))
2185 (build-system gnu-build-system)
2186 (arguments
2187 `(#:configure-flags
2188 (list "--enable-pthread" "--enable-off64" "--enable-fastest"
2189 (string-append "LDFLAGS=-Wl,-rpath="
2190 (assoc-ref %outputs "out") "/lib"))))
2191 (inputs
2192 `(("zlib" ,zlib)))
2193 (home-page "http://fallabs.com/tokyocabinet/")
2194 (synopsis "Tokyo Cabinet is a modern implementation of the DBM database")
2195 (description
2196 "Tokyo Cabinet is a library of routines for managing a database.
2197The database is a simple data file containing records, each is a pair of a
2198key and a value. Every key and value is serial bytes with variable length.
2199Both binary data and character string can be used as a key and a value.
2200There is neither concept of data tables nor data types. Records are
2201organized in hash table, B+ tree, or fixed-length array.")
2202 (license license:lgpl2.1+)))
2203
6242b314
SB
2204(define-public wiredtiger
2205 (package
2206 (name "wiredtiger")
81e95821 2207 (version "2.9.1")
6242b314
SB
2208 (source (origin
2209 (method url-fetch)
2210 (uri (string-append
2211 "http://source.wiredtiger.com/releases/wiredtiger-"
2212 version ".tar.bz2"))
2213 (sha256
2214 (base32
81e95821 2215 "0krwnb2zfbhvjaskwl875qzd3y626s84zcciq2mxr5c5riw3yh6s"))))
6242b314
SB
2216 (build-system gnu-build-system)
2217 (arguments
a469c695 2218 '(#:configure-flags '("--enable-lz4" "--with-builtins=snappy,zlib")
6242b314
SB
2219 #:phases
2220 (modify-phases %standard-phases
2221 (add-before 'check 'disable-test/fops
2222 (lambda _
2223 ;; XXX: timed out after 3600 seconds of silence
2224 (substitute* "Makefile"
2225 (("test/fops") ""))
2226 #t)))))
2227 (inputs
2228 `(("lz4" ,lz4)
3faa422d
CB
2229 ("zlib" ,zlib)
2230 ("snappy" ,snappy)))
6242b314
SB
2231 (home-page "http://source.wiredtiger.com/")
2232 (synopsis "NoSQL data engine")
2233 (description
2234 "WiredTiger is an extensible platform for data management. It supports
2235row-oriented storage (where all columns of a row are stored together),
2236column-oriented storage (where columns are stored in groups, allowing for
2237more efficient access and storage of column subsets) and log-structured merge
2238trees (LSM), for sustained throughput under random insert workloads.")
ba8b9f8d 2239 (license license:gpl3) ; or GPL-2
6242b314 2240 ;; configure.ac: WiredTiger requires a 64-bit build.
092b7b3e 2241 (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))))
90c2ee88 2242
4680fef7
AB
2243(define-public wiredtiger-3
2244 (package
2245 (inherit wiredtiger)
2246 (name "wiredtiger")
2247 (version "3.1.0")
2248 (source (origin
2249 (method url-fetch)
2250 (uri (string-append "http://source.wiredtiger.com/releases/wiredtiger-"
2251 version ".tar.bz2"))
2252 (sha256
2253 (base32
2254 "014awypv579ascg4jbx4pndj2wld337m79yyzrzyr7hxrff139jx"))))))
2255
16973071
KB
2256(define-public guile-wiredtiger
2257 (package
2258 (name "guile-wiredtiger")
b1e6b938 2259 (version "0.7.0")
16973071
KB
2260 (source (origin
2261 (method git-fetch)
2262 (uri (git-reference
2263 (url "https://framagit.org/a-guile-mind/guile-wiredtiger.git")
b1e6b938 2264 (commit "340ad4bc2ff4dcc6216a2f5c6f9172ca320ac66b")))
16973071
KB
2265 (file-name (string-append name "-" version "-checkout"))
2266 (sha256
2267 (base32
b1e6b938 2268 "15j36bvxxzil7qpwlmh1rffqpva3ynvrcpqhhqbj2c9208ayz595"))))
16973071
KB
2269 (build-system gnu-build-system)
2270 (arguments
3926a099 2271 '(#:parallel-tests? #f ;; tests can't be run in parallel, yet.
16973071
KB
2272 #:configure-flags
2273 (list (string-append "--with-libwiredtiger-prefix="
2274 (assoc-ref %build-inputs "wiredtiger")))
189be331 2275 #:make-flags '("GUILE_AUTO_COMPILE=0")))
16973071
KB
2276 (native-inputs
2277 `(("autoconf" ,autoconf)
2278 ("automake" ,automake)
2279 ("pkg-config" ,pkg-config)))
2280 (inputs
b1e6b938 2281 `(("wiredtiger" ,wiredtiger-3)
16973071
KB
2282 ("guile" ,guile-2.2)))
2283 (propagated-inputs
b1e6b938 2284 `(("guile-bytestructures" ,guile-bytestructures)))
3926a099 2285 (synopsis "WiredTiger bindings for GNU Guile")
16973071
KB
2286 (description
2287 "This package provides Guile bindings to the WiredTiger ``NoSQL''
b1e6b938 2288database.")
16973071
KB
2289 (home-page "https://framagit.org/a-guile-mind/guile-wiredtiger")
2290 (license license:gpl3+)))
2291
90c2ee88
DM
2292(define-public perl-db-file
2293 (package
2294 (name "perl-db-file")
24dd78a3 2295 (version "1.855")
90c2ee88
DM
2296 (source
2297 (origin
2298 (method url-fetch)
76899e92
TGR
2299 (uri (string-append "mirror://cpan/authors/id/P/PM/PMQS/DB_File-"
2300 version ".tar.gz"))
90c2ee88 2301 (sha256
24dd78a3 2302 (base32 "0q599h7g4jkzks5dxf1zifx9k7l9vif26r2dlgkzxkg6bfif5zyr"))))
90c2ee88
DM
2303 (build-system perl-build-system)
2304 (inputs `(("bdb" ,bdb)))
2305 (native-inputs `(("perl-test-pod" ,perl-test-pod)))
2306 (arguments
2307 `(#:phases (modify-phases %standard-phases
2308 (add-before
2309 'configure 'modify-config.in
2310 (lambda* (#:key inputs #:allow-other-keys)
2311 (substitute* "config.in"
2312 (("/usr/local/BerkeleyDB") (assoc-ref inputs "bdb")))
2313 #t)))))
9aba9b12 2314 (home-page "https://metacpan.org/release/DB_File")
ce054e84 2315 (synopsis "Perl5 access to Berkeley DB version 1.x")
90c2ee88
DM
2316 (description
2317 "The DB::File module provides Perl bindings to the Berkeley DB version 1.x.")
2f3108ad 2318 (license license:perl-license)))
0e1b262e
DC
2319
2320(define-public lmdb
2321 (package
2322 (name "lmdb")
09306c74 2323 (version "0.9.27")
f167b432
TGR
2324 (source
2325 (origin
2326 (method git-fetch)
2327 (uri (git-reference
8fc6059b 2328 (url "https://git.openldap.org/openldap/openldap.git")
f167b432
TGR
2329 (commit (string-append "LMDB_" version))))
2330 (file-name (git-file-name name version))
2331 (sha256
09306c74 2332 (base32 "09xqqm8yjsf1gv4gd4llal48sms76hfhxadx6rik1j2g5v3d3f1k"))))
0e1b262e
DC
2333 (build-system gnu-build-system)
2334 (arguments
2335 `(#:test-target "test"
2336 #:phases
2337 (modify-phases %standard-phases
2338 (replace 'configure
2339 (lambda* (#:key outputs #:allow-other-keys)
f167b432 2340 (chdir "libraries/liblmdb")
0e1b262e
DC
2341 (substitute* "Makefile"
2342 (("/usr/local") (assoc-ref outputs "out")))
2343 #t)))))
669fde53 2344 (home-page "https://symas.com/lmdb/")
fda852ff
TGR
2345 (synopsis "Lightning Memory-Mapped Database library")
2346 (description
2347 "The @dfn{Lightning Memory-Mapped Database} (LMDB) is a high-performance
2348transactional database. Unlike more complex relational databases, LMDB handles
2349only key-value pairs (stored as arbitrary byte arrays) and relies on the
2350underlying operating system for caching and locking, keeping the code small and
2351simple.
2352The use of ‘zero-copy’ memory-mapped files combines the persistence of classic
2353disk-based databases with high read performance that scales linearly over
2354multiple cores. The size of each database is limited only by the size of the
2355virtual address space — not physical RAM.")
0e1b262e 2356 (license license:openldap2.8)))
fe71eee0 2357
659bc436 2358(define-public lmdbxx
2359 (package
2360 (name "lmdbxx")
2361 (version "0.9.14.0")
2362 (source
2363 (origin
2364 (method git-fetch)
2365 (uri (git-reference
b0e7b699 2366 (url "https://github.com/drycpp/lmdbxx")
659bc436 2367 (commit version)))
2368 (file-name (git-file-name name version))
2369 (sha256
2370 (base32 "1jmb9wg2iqag6ps3z71bh72ymbcjrb6clwlkgrqf1sy80qwvlsn6"))))
2371 (arguments
2372 `(#:make-flags
2373 (list (string-append "PREFIX=" (assoc-ref %outputs "out")))
2374 #:phases
2375 (modify-phases %standard-phases
2376 (delete 'configure))))
2377 (build-system gnu-build-system)
2378 (inputs `(("lmdb" ,lmdb)))
2379 (home-page "http://lmdbxx.sourceforge.net")
2380 (synopsis "C++11 wrapper for the LMDB embedded B+ tree database library")
2381 (description "@code{lmdbxx} is a comprehensive @code{C++} wrapper for the
2382@code{LMDB} embedded database library, offering both an error-checked
2383procedural interface and an object-oriented resource interface with RAII
2384semantics.")
2385 (license license:unlicense)))
2386
fe71eee0
JN
2387(define-public libpqxx
2388 (package
2389 (name "libpqxx")
2390 (version "4.0.1")
2391 (source (origin
2392 (method url-fetch)
2393 (uri (string-append
2394 "http://pqxx.org/download/software/libpqxx/"
2395 name "-" version ".tar.gz"))
2396 (sha256
2397 (base32
2398 "0f6wxspp6rx12fkasanb0z2g2gc8dhcfwnxagx8wwqbpg6ifsz09"))))
2399 (build-system gnu-build-system)
2400 (native-inputs
2401 `(("python" ,python-2)))
2402 (inputs `(("postgresql" ,postgresql)))
2403 (arguments
5ac097e2
MB
2404 `(#:tests? #f ; # FAIL: 1
2405 #:phases
2406 (modify-phases %standard-phases
2407 (add-before 'configure 'fix-sed-command
2408 (lambda _
2409 ;; Newer sed versions error out if double brackets are not used.
2410 (substitute* "configure"
2411 (("\\[:space:\\]") "[[:space:]]"))
2412 #t)))))
fe71eee0
JN
2413 (synopsis "C++ connector for PostgreSQL")
2414 (description
2415 "Libpqxx is a C++ library to enable user programs to communicate with the
2416PostgreSQL database back-end. The database back-end can be local or it may be
2417on another machine, accessed via TCP/IP.")
2418 (home-page "http://pqxx.org/")
2419 (license license:bsd-3)))
4d98bfaf
EF
2420
2421(define-public python-peewee
2422 (package
2423 (name "python-peewee")
0fecc6ce 2424 (version "3.14.0")
831f1ff9
MR
2425 (source
2426 (origin
2427 (method url-fetch)
2428 (uri (pypi-uri "peewee" version))
2429 (sha256
0fecc6ce 2430 (base32 "1yl49gxrg0c2x3n3r60z3lixw9am8b61s0477l9vjabhhx1yziar"))))
4d98bfaf
EF
2431 (build-system python-build-system)
2432 (arguments
0fecc6ce 2433 `(#:tests? #f)) ; fails to import test data
831f1ff9
MR
2434 (inputs
2435 `(("sqlite" ,sqlite)))
4d98bfaf
EF
2436 (native-inputs
2437 `(("python-cython" ,python-cython)))
2438 (home-page "https://github.com/coleifer/peewee/")
2439 (synopsis "Small object-relational mapping utility")
2440 (description
2441 "Peewee is a simple and small ORM (object-relation mapping) tool. Peewee
2442handles converting between pythonic values and those used by databases, so you
2443can use Python types in your code without having to worry. It has built-in
2444support for sqlite, mysql and postgresql. If you already have a database, you
2445can autogenerate peewee models using @code{pwiz}, a model generator.")
2446 (license license:expat)))
2447
2448(define-public python2-peewee
2449 (package-with-python2 python-peewee))
62ea44fc 2450
1110a421
LDB
2451(define-public python-tortoise-orm
2452 (package
2453 (name "python-tortoise-orm")
b9d96ed7 2454 (version "0.16.7")
1110a421
LDB
2455 (source
2456 (origin
2457 (method url-fetch)
2458 (uri (pypi-uri "tortoise-orm" version))
2459 (sha256
2460 (base32
b9d96ed7 2461 "0wr7p4v0b16ypm9fcpwpl99kf491m6w3jkd13xcsgq13fy73fbqc"))))
1110a421
LDB
2462 (build-system python-build-system)
2463 ;; Disable tests for now. They pull in a lot of dependencies.
2464 (arguments `(#:tests? #f))
2465 (native-inputs
b9d96ed7 2466 `(("python-asynctest" ,python-asynctest)
1110a421
LDB
2467 ("python-nose2" ,python-nose2)))
2468 (propagated-inputs
2469 `(("python-aiosqlite" ,python-aiosqlite)
2470 ("python-pypika" ,python-pypika)
b9d96ed7 2471 ("python-ciso8601" ,python-ciso8601)
1110a421
LDB
2472 ("python-typing-extensions"
2473 ,python-typing-extensions)))
2474 (home-page
2475 "https://github.com/tortoise/tortoise-orm")
2476 (synopsis
2477 "Easy async ORM for python, built with relations in mind")
2478 (description
2479 "Tortoise ORM is an easy-to-use asyncio ORM (Object Relational Mapper)
2480inspired by Django. Tortoise ORM was build with relations in mind and
2481admiration for the excellent and popular Django ORM. It’s engraved in its
2482design that you are working not with just tables, you work with relational
2483data.")
2484 (license license:asl2.0)))
2485
62ea44fc
AP
2486(define-public sqlcipher
2487 (package
2488 (name "sqlcipher")
682c2918 2489 (version "3.4.2")
62ea44fc
AP
2490 (source
2491 (origin
2492 (method url-fetch)
2493 (uri (string-append "https://github.com/sqlcipher/" name
2494 "/archive/v" version ".tar.gz"))
2495 (sha256
682c2918 2496 (base32 "1nxarwbci8jx99f1d0y1ivxcv25s78l1p7q6qy28lkpkcx8pm2b9"))
62ea44fc
AP
2497 (file-name (string-append name "-" version ".tar.gz"))))
2498 (build-system gnu-build-system)
2499 (inputs
2500 `(("libcrypto" ,openssl)
2501 ("libtcl8.6" ,tcl))) ; required for running the tests
2502 (native-inputs
2503 `(("tcl" ,tcl)))
2504 (arguments
2505 '(#:configure-flags
2506 '("--enable-tempstore=yes"
2507 "CFLAGS=-DSQLITE_HAS_CODEC -DSQLITE_ENABLE_FTS3"
2508 "LDFLAGS=-lcrypto -ltcl8.6"
2509 "--disable-tcl")
2510 ;; tests cannot be run from the Makefile
2511 ;; see: <https://github.com/sqlcipher/sqlcipher/issues/172>
2512 #:test-target "testfixture"
2513 #:phases
2514 (modify-phases %standard-phases
2515 (add-before 'check 'build-test-runner
2516 (assoc-ref %standard-phases 'check))
2517 (replace 'check
2518 (lambda _
96272e28 2519 (invoke "./testfixture" "test/crypto.test"))))))
62ea44fc
AP
2520 (home-page "https://www.zetetic.net/sqlcipher/")
2521 (synopsis
2522 "Library providing transparent encryption of SQLite database files")
2523 (description "SQLCipher is an implementation of SQLite, extended to
2524provide transparent 256-bit AES encryption of database files. Pages are
2525encrypted before being written to disk and are decrypted when read back. It’s
2526well suited for protecting embedded application databases and for mobile
2527development.")
2528 ;; The source files
2529 ;; src/{crypto.c,crypto_impl.c,crypto.h,crypto_cc.c,crypto_libtomcrypt.c},
2530 ;; src/{crypto_openssl.c,sqlcipher.h}, tool/crypto-speedtest.tcl,
2531 ;; test/crypto.test are licensed under a 3-clause BSD license. All other
2532 ;; source files are in the public domain.
2533 (license (list license:public-domain license:bsd-3))))
98d403bb
DM
2534
2535(define-public python-pyodbc-c
2536 (package
2537 (name "python-pyodbc-c")
c6b6a74e 2538 (version "3.1.4")
98d403bb
DM
2539 (source
2540 (origin
2541 (method url-fetch)
2542 (uri (string-append "https://gitlab.com/daym/pyodbc-c/repository/"
2543 "archive.tar.gz?ref=v" version))
2544 (sha256
2545 (base32
c6b6a74e 2546 "05aq2297k779xidmxcwkrrxjvj1bh2q7d9a1rcjv6zr15y764ga9"))
98d403bb
DM
2547 (file-name (string-append name "-" version ".tar.gz"))))
2548 (build-system python-build-system)
2549 (inputs
2550 `(("unixodbc" ,unixodbc)))
2551 (arguments
2552 `(;; No unit tests exist.
2553 #:tests? #f))
2554 (home-page "https://github.com/mkleehammer/pyodbc")
2555 (synopsis "Python ODBC Library")
2556 (description "@code{python-pyodbc-c} provides a Python DB-API driver
2557for ODBC.")
2558 (license (license:x11-style "file://LICENSE.TXT"))))
2559
2560(define-public python2-pyodbc-c
2561 (package-with-python2 python-pyodbc-c))
d39a84e8 2562
41916bea
DM
2563(define-public python-pyodbc
2564 (package
2565 (name "python-pyodbc")
dbc8a6e7 2566 (version "4.0.30")
41916bea
DM
2567 (source
2568 (origin
2569 (method url-fetch)
2570 (uri (pypi-uri "pyodbc" version))
2571 (sha256
dbc8a6e7 2572 (base32 "0skjpraar6hcwsy82612bpj8nw016ncyvvq88j5syrikxgp5saw5"))
41916bea
DM
2573 (file-name (string-append name "-" version ".tar.gz"))))
2574 (build-system python-build-system)
2575 (inputs
2576 `(("unixodbc" ,unixodbc)))
2577 (arguments
d5be746a 2578 `(#:tests? #f)) ; no unit tests exist
41916bea
DM
2579 (home-page "https://github.com/mkleehammer/pyodbc")
2580 (synopsis "Python ODBC Library")
2581 (description "@code{python-pyodbc} provides a Python DB-API driver
2582for ODBC.")
2583 (license (license:x11-style "file:///LICENSE.TXT"))))
2584
2585(define-public python2-pyodbc
2586 (package-with-python2 python-pyodbc))
2587
d39a84e8
AI
2588(define-public mdbtools
2589 (package
2590 (name "mdbtools")
2591 (version "0.7.1")
2592 (source
2593 (origin
f1f1cebd
RW
2594 (method git-fetch)
2595 (uri (git-reference
b0e7b699 2596 (url "https://github.com/brianb/mdbtools")
f1f1cebd
RW
2597 (commit version)))
2598 (file-name (git-file-name name version))
d39a84e8
AI
2599 (sha256
2600 (base32
f1f1cebd 2601 "0gwcpp9y09xhs21g7my2fs8ncb8i6ahlyixcx8jd3q97jbzj441l"))))
d39a84e8
AI
2602 (build-system gnu-build-system)
2603 (inputs
2604 `(("glib" ,glib)))
2605 (native-inputs
2606 `(("autoconf" ,autoconf)
2607 ("automake" ,automake)
2608 ("libtool" ,libtool)
2609 ("pkg-config" ,pkg-config)
2610 ("txt2man" ,txt2man)
2611 ("which" ,which)))
d39a84e8
AI
2612 (home-page "http://mdbtools.sourceforge.net/")
2613 (synopsis "Read Microsoft Access databases")
2614 (description "MDB Tools is a set of tools and applications to read the
2615proprietary MDB file format used in Microsoft's Access database package. This
2616includes programs to export schema and data from Microsoft's Access database
2617file format to other databases such as MySQL, Oracle, Sybase, PostgreSQL,
2618etc., and an SQL engine for performing simple SQL queries.")
2619 (license (list license:lgpl2.0
2620 license:gpl2+))))
07041d95
TGR
2621
2622(define-public python-lmdb
2623 (package
2624 (name "python-lmdb")
771c266b 2625 (version "1.0.0")
07041d95
TGR
2626 (source (origin
2627 (method url-fetch)
2628 (uri (pypi-uri "lmdb" version))
2629 (sha256
2630 (base32
771c266b 2631 "1di1gj2agbxwqqwrpk4w58dpfah0kl10ha20s63dlqdd1bgzydj1"))
07041d95
TGR
2632 (modules '((guix build utils)))
2633 (snippet
2634 ;; Delete bundled lmdb source files.
6cbee49d
MW
2635 '(begin
2636 (for-each delete-file (list "lib/lmdb.h"
2637 "lib/mdb.c"
2638 "lib/midl.c"
2639 "lib/midl.h"))
2640 #t))))
07041d95
TGR
2641 (build-system python-build-system)
2642 (inputs
2643 `(("lmdb" ,lmdb)))
2644 (arguments
2645 `(#:phases
2646 (modify-phases %standard-phases
2647 (add-before 'build 'use-system-lmdb
2648 (lambda* (#:key inputs #:allow-other-keys)
2649 (let ((lmdb (assoc-ref inputs "lmdb")))
771c266b 2650 (setenv "LMDB_PURE" "set") ; don't apply env-copy-txn.patch
07041d95
TGR
2651 (setenv "LMDB_FORCE_SYSTEM" "set")
2652 (setenv "LMDB_INCLUDEDIR" (string-append lmdb "/include"))
2653 (setenv "LMDB_LIBDIR" (string-append lmdb "/lib"))
2654 #t))))
2655 ;; Tests fail with: ‘lmdb.tool: Please specify environment (--env)’.
2656 #:tests? #f))
2657 (home-page "https://github.com/dw/py-lmdb")
2658 (synopsis "Python binding for the ‘Lightning’ database (LMDB)")
2659 (description
2660 "python-lmdb or py-lmdb is a Python binding for the @dfn{Lightning
2661Memory-Mapped Database} (LMDB), a high-performance key-value store.")
2662 (license
2663 (list license:openldap2.8
2664 ;; ‘lib/win32/inttypes.h’ and ‘lib/win32-stdint/stdint.h’ are BSD-3,
2665 ;; but not actually needed on platforms currently supported by Guix.
2666 license:bsd-3))))
2667
da1f7a9e
BW
2668(define-public python-orator
2669 (package
2670 (name "python-orator")
51d42caa 2671 (version "0.9.9")
da1f7a9e
BW
2672 (source (origin
2673 (method url-fetch)
2674 (uri (pypi-uri "orator" version))
2675 (sha256
2676 (base32
51d42caa 2677 "0mbgybz63ryhr9p1f4glnls5c57jp6il3dw0kf97f3pj80687rvg"))))
da1f7a9e 2678 (build-system python-build-system)
51d42caa
MB
2679 ;; FIXME: Tests are not distributed with PyPI, and the repository
2680 ;; does not contain setup.py. How to test?
2681 (arguments '(#:tests? #f))
da1f7a9e
BW
2682 (propagated-inputs
2683 `(("python-backpack" ,python-backpack)
2684 ("python-blinker" ,python-blinker)
2685 ("python-cleo" ,python-cleo)
2686 ("python-faker" ,python-faker)
2687 ("python-inflection" ,python-inflection)
2688 ("python-lazy-object-proxy" ,python-lazy-object-proxy)
2689 ("python-pendulum" ,python-pendulum)
2690 ("python-pyaml" ,python-pyaml)
2691 ("python-pygments" ,python-pygments)
51d42caa 2692 ("python-pyyaml" ,python-pyyaml)
da1f7a9e
BW
2693 ("python-simplejson" ,python-simplejson)
2694 ("python-six" ,python-six)
2695 ("python-wrapt" ,python-wrapt)))
2696 (home-page "https://orator-orm.com/")
2697 (synopsis "ActiveRecord ORM for Python")
2698 (description
2699 "Orator provides a simple ActiveRecord-like Object Relational Mapping
2700implementation for Python.")
2701 (license license:expat)
2702 (properties `((python2-variant . ,(delay python2-orator))))))
2703
2704(define-public python2-orator
2705 (package-with-python2 (strip-python2-variant python-orator)))
61ce0998
RJ
2706
2707(define-public virtuoso-ose
2708 (package
2709 (name "virtuoso-ose")
e63da346 2710 (version "7.2.5")
61ce0998
RJ
2711 (source
2712 (origin
2713 (method url-fetch)
2714 (uri (string-append
2715 "https://github.com/openlink/virtuoso-opensource/releases/"
2716 "download/v" version "/virtuoso-opensource-" version ".tar.gz"))
2717 (sha256
e63da346 2718 (base32 "0r1xakclkfi69pzh8z2k16z3x0m49pxp764icj0ad4w4bb97fr42"))))
61ce0998
RJ
2719 (build-system gnu-build-system)
2720 (arguments
6d09a7b5
RJ
2721 `(#:tests? #f ; Tests require a network connection.
2722 ;; TODO: Removing the libsrc/zlib source directory breaks the build.
2723 ;; This indicates that the internal zlib code may still be used.
2724 #:configure-flags '("--without-internal-zlib"
d26bf529
RJ
2725 "--with-readline"
2726 "--enable-static=no")
2727 #:phases
2728 (modify-phases %standard-phases
2729 ;; Even with "--enable-static=no", "libvirtuoso-t.a" is left in
2730 ;; the build output. The following phase removes it.
2731 (add-after 'install 'remove-static-libs
2732 (lambda* (#:key outputs #:allow-other-keys)
2733 (let ((lib (string-append (assoc-ref outputs "out") "/lib")))
2734 (for-each (lambda (file)
2735 (delete-file (string-append lib "/" file)))
2736 '("libvirtuoso-t.a"
2737 "libvirtuoso-t.la"))))))))
61ce0998 2738 (inputs
95c633e0 2739 `(("openssl" ,openssl-1.0)
6d09a7b5
RJ
2740 ("net-tools" ,net-tools)
2741 ("readline" ,readline)
2742 ("zlib" ,zlib)))
61ce0998
RJ
2743 (home-page "http://vos.openlinksw.com/owiki/wiki/VOS/")
2744 (synopsis "Multi-model database system")
2745 (description "Virtuoso is a scalable cross-platform server that combines
2746relational, graph, and document data management with web application server
2747and web services platform functionality.")
48b68c61
EF
2748 ;; configure: error: ... can only be build on 64bit platforms
2749 (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))
61ce0998 2750 (license license:gpl2)))
74248d22 2751
a8714bf6
RW
2752(define-public python-ccm
2753 (package
2754 (name "python-ccm")
2755 (version "2.1.6")
2756 (source
2757 (origin
2758 (method url-fetch)
2759 (uri (pypi-uri "ccm" version))
2760 (sha256
2761 (base32
2762 "177dfxsmk3k4cih6fh6v8d91bh4nqx7ns6pc07w7m7i3cvdx3c8n"))))
2763 (build-system python-build-system)
2764 (propagated-inputs
2765 `(("python-pyyaml" ,python-pyyaml)
2766 ;; Not listed in setup.py, but used in ccmlib/node.py for full
2767 ;; functionality
2768 ("python-psutil" ,python-psutil)
2769 ("python-six" ,python-six)))
2770 (home-page "https://github.com/pcmanus/ccm")
2771 (synopsis "Cassandra Cluster Manager for Apache Cassandra clusters on
2772localhost")
2773 (description "Cassandra Cluster Manager is a development tool for testing
2774local Cassandra clusters. It creates, launches and removes Cassandra clusters
2775on localhost.")
2776 (license license:asl2.0)))
2777
2778(define-public python2-ccm
2779 (package-with-python2 python-ccm))
2780
2781(define-public python2-pysqlite
2782 (package
2783 (name "python2-pysqlite")
2784 (version "2.8.3")
2785 (source
2786 (origin
2787 (method url-fetch)
2788 (uri (pypi-uri "pysqlite" version))
2789 (sha256
2790 (base32
2791 "1424gwq9sil2ffmnizk60q36vydkv8rxs6m7xs987kz8cdc37lqp"))))
2792 (build-system python-build-system)
2793 (inputs
2794 `(("sqlite" ,sqlite)))
2795 (arguments
2796 `(#:python ,python-2 ; incompatible with Python 3
2797 #:tests? #f)) ; no test target
2798 (home-page "https://github.com/ghaering/pysqlite")
2799 (synopsis "SQLite bindings for Python")
2800 (description
2801 "Pysqlite provides SQLite bindings for Python that comply to the
2802Database API 2.0T.")
2803 (license license:zlib)))
2804
2805(define-public python-sqlalchemy
2806 (package
2807 (name "python-sqlalchemy")
7969a6ad 2808 (version "1.3.20")
a8714bf6
RW
2809 (source
2810 (origin
2811 (method url-fetch)
aeec4a8f 2812 (uri (pypi-uri "SQLAlchemy" version))
a8714bf6 2813 (sha256
7969a6ad 2814 (base32 "18b9am7bsqc4nj3d2h5r93i002apczxfvpfpcqbd6f0385zmrwnj"))))
a8714bf6
RW
2815 (build-system python-build-system)
2816 (native-inputs
6d04f694 2817 `(("python-cython" ,python-cython) ; for C extensions
a8714bf6 2818 ("python-pytest" ,python-pytest)
6d04f694 2819 ("python-mock" ,python-mock))) ; for tests
a8714bf6
RW
2820 (arguments
2821 `(#:phases
2822 (modify-phases %standard-phases
2823 (replace 'check
9871a896 2824 (lambda _ (invoke "py.test"))))))
5cfe650b 2825 (home-page "https://www.sqlalchemy.org")
a8714bf6
RW
2826 (synopsis "Database abstraction library")
2827 (description
2828 "SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that
2829gives application developers the full power and flexibility of SQL. It
2830provides a full suite of well known enterprise-level persistence patterns,
2831designed for efficient and high-performing database access, adapted into a
2832simple and Pythonic domain language.")
2833 (license license:x11)))
2834
2835(define-public python2-sqlalchemy
2836 (package-with-python2 python-sqlalchemy))
2837
2838(define-public python-sqlalchemy-utils
2839 (package
2840 (name "python-sqlalchemy-utils")
53ae35e4 2841 (version "0.32.21")
a8714bf6
RW
2842 (source
2843 (origin
2844 (method url-fetch)
2845 (uri (pypi-uri "SQLAlchemy-Utils" version))
2846 (sha256
2847 (base32
53ae35e4 2848 "1myn71dn8j74xglyh46f12sh8ywb7j0j732rzwq70kvwwnq32m73"))))
a8714bf6
RW
2849 (build-system python-build-system)
2850 (arguments
2851 '(#:tests? #f)) ; FIXME: Many tests require a running database server.
2852 ;; #:phases
2853 ;; (modify-phases %standard-phases
2854 ;; (replace 'check
2855 ;; (lambda _
2856 ;; (zero? (system* "py.test" "sqlalchemy_utils" "tests")))))
2857 (propagated-inputs
2858 `(("python-six" ,python-six)
2859 ("python-sqlalchemy" ,python-sqlalchemy)))
2860 (native-inputs
2861 `(("python-dateutil" ,python-dateutil)
2862 ("python-flexmock" ,python-flexmock)
2863 ("python-psycopg2" ,python-psycopg2)
2864 ("python-pytest" ,python-pytest)
2865 ("python-pytz" ,python-pytz)))
2866 (home-page "https://github.com/kvesteri/sqlalchemy-utils")
2867 (synopsis "Various utility functions for SQLAlchemy")
2868 (description
2869 "SQLAlchemy-utils provides various utility functions and custom data types
2870for SQLAlchemy. SQLAlchemy is an SQL database abstraction library for Python.
2871
2872You might also want to install the following optional dependencies:
2873@enumerate
2874@item @code{python-passlib}
2875@item @code{python-babel}
2876@item @code{python-cryptography}
2877@item @code{python-pytz}
2878@item @code{python-psycopg2}
2879@item @code{python-furl}
2880@item @code{python-flask-babel}
2881@end enumerate
2882")
2883 (license license:bsd-3)))
2884
2885(define-public python2-sqlalchemy-utils
2886 (package-with-python2 python-sqlalchemy-utils))
2887
de84d3b1
MB
2888(define-public python-alchemy-mock
2889 (package
2890 (name "python-alchemy-mock")
2891 (version "0.4.3")
2892 (home-page "https://github.com/miki725/alchemy-mock")
2893 (source (origin
2894 (method url-fetch)
2895 (uri (pypi-uri "alchemy-mock" version))
2896 (sha256
2897 (base32
2898 "0ylxygl3bcdapzz529n8wgk7vx9gjwb3ism564ypkpd7dbsw653r"))))
2899 (build-system python-build-system)
2900 (arguments
2901 '(#:phases (modify-phases %standard-phases
2902 (replace 'check
2903 (lambda _
2904 ;; Create pytest.ini that adds doctest options to
2905 ;; prevent test failure. Taken from tox.ini.
2906 (call-with-output-file "pytest.ini"
2907 (lambda (port)
2908 (format port "[pytest]
2909doctest_optionflags=IGNORE_EXCEPTION_DETAIL
2910")))
2911 (invoke "pytest" "-vv" "--doctest-modules"
2912 "alchemy_mock/"))))))
2913 (native-inputs
2914 `(("python-mock" ,python-mock)
2915 ("python-pytest" ,python-pytest)))
2916 (propagated-inputs
2917 `(("python-six" ,python-six)
2918 ("python-sqlalchemy" ,python-sqlalchemy)))
2919 (synopsis "Mock helpers for SQLAlchemy")
2920 (description
2921 "This package provides mock helpers for SQLAlchemy that makes it easy
2922to mock an SQLAlchemy session while preserving the ability to do asserts.
2923
2924Normally Normally SQLAlchemy's expressions cannot be easily compared as
2925comparison on binary expression produces yet another binary expression, but
2926this library provides functions to facilitate such comparisons.")
2927 (license license:expat)))
2928
a8714bf6
RW
2929(define-public python-alembic
2930 (package
2931 (name "python-alembic")
63d37b3c 2932 (version "1.4.3")
a8714bf6
RW
2933 (source
2934 (origin
2935 (method url-fetch)
2936 (uri (pypi-uri "alembic" version))
2937 (sha256
63d37b3c 2938 (base32 "0if2dgb088clk738p26bwk50735h6jpd2kacdgc5capv2hiz6d2k"))))
a8714bf6 2939 (build-system python-build-system)
45ebd90c
MB
2940 (arguments
2941 '(#:phases (modify-phases %standard-phases
2942 (replace 'check
2943 (lambda _
2944 (invoke "pytest" "-vv"))))))
a8714bf6
RW
2945 (native-inputs
2946 `(("python-mock" ,python-mock)
2947 ("python-pytest-cov" ,python-pytest-cov)))
2948 (propagated-inputs
2949 `(("python-dateutil" ,python-dateutil)
2950 ("python-sqlalchemy" ,python-sqlalchemy)
2951 ("python-mako" ,python-mako)
2952 ("python-editor" ,python-editor)))
a7f27da7 2953 (home-page "https://bitbucket.org/zzzeek/alembic")
6743080c 2954 (synopsis "Database migration tool for SQLAlchemy")
a8714bf6
RW
2955 (description
2956 "Alembic is a lightweight database migration tool for usage with the
2957SQLAlchemy Database Toolkit for Python.")
2958 (license license:expat)))
2959
2960(define-public python2-alembic
2961 (package-with-python2 python-alembic))
2962
2963(define-public python-pickleshare
2964 (package
2965 (name "python-pickleshare")
f825faa5 2966 (version "0.7.5")
a8714bf6
RW
2967 (source
2968 (origin
2969 (method url-fetch)
ed519b3c 2970 (uri (pypi-uri "pickleshare" version))
a8714bf6 2971 (sha256
f825faa5 2972 (base32 "1jmghg3c53yp1i8cm6pcrm280ayi8621rwyav9fac7awjr3kss47"))))
a8714bf6 2973 (build-system python-build-system)
ff856cfd
MB
2974 (arguments
2975 `(#:phases (modify-phases %standard-phases
2976 (replace 'check
2977 (lambda _
2978 (invoke "pytest"))))))
2979 (native-inputs
2980 `(("python-pytest" ,python-pytest)))
a8714bf6
RW
2981 (home-page "https://github.com/vivainio/pickleshare")
2982 (synopsis "Tiny key value database with concurrency support")
2983 (description
2984 "PickleShare is a small ‘shelve’-like datastore with concurrency support.
2985Like shelve, a PickleShareDB object acts like a normal dictionary. Unlike
2986shelve, many processes can access the database simultaneously. Changing a
2987value in database is immediately visible to other processes accessing the same
2988database. Concurrency is possible because the values are stored in separate
2989files. Hence the “database” is a directory where all files are governed by
2990PickleShare.")
ed519b3c 2991 (properties `((python2-variant . ,(delay python2-pickleshare))))
a8714bf6
RW
2992 (license license:expat)))
2993
2994(define-public python2-pickleshare
ed519b3c
MB
2995 (let ((pickleshare (package-with-python2
2996 (strip-python2-variant python-pickleshare))))
2997 (package (inherit pickleshare)
2998 (propagated-inputs `(("python2-pathlib2" ,python2-pathlib2)
2999 ,@(package-propagated-inputs pickleshare))))))
a8714bf6
RW
3000
3001(define-public python-apsw
3002 (package
3003 (name "python-apsw")
d05e3b08 3004 (version "3.31.1-r1")
a8714bf6
RW
3005 (source
3006 (origin
3007 (method url-fetch)
9930beb8
EF
3008 (uri (string-append "https://github.com/rogerbinns/apsw/releases"
3009 "/download/" version "/apsw-" version ".zip"))
a8714bf6
RW
3010 (sha256
3011 (base32
d05e3b08 3012 "1gap5lr6c7bp134nzvfwr693i6d0fqyaysg3ms2cayjldv616yfx"))))
a8714bf6 3013 (build-system python-build-system)
9930beb8
EF
3014 (native-inputs
3015 `(("unzip" ,unzip)))
a8714bf6 3016 (inputs
c553b08b 3017 `(("sqlite" ,sqlite)))
a8714bf6
RW
3018 (arguments
3019 `(#:phases
3020 (modify-phases %standard-phases
3021 (replace 'build
3022 (lambda _
c553b08b
EF
3023 (invoke "python" "setup.py" "build" "--enable-all-extensions")
3024 #t))
a8714bf6
RW
3025 (add-after 'build 'build-test-helper
3026 (lambda _
c553b08b
EF
3027 (invoke "gcc" "-fPIC" "-shared" "-o" "./testextension.sqlext"
3028 "-I." "-Isqlite3" "src/testextension.c")
3029 #t))
53a9970e 3030 (replace 'check
a8714bf6
RW
3031 (lambda* (#:key inputs outputs #:allow-other-keys)
3032 (add-installed-pythonpath inputs outputs)
c553b08b
EF
3033 (invoke "python" "setup.py" "test")
3034 #t)))))
a8714bf6
RW
3035 (home-page "https://github.com/rogerbinns/apsw/")
3036 (synopsis "Another Python SQLite Wrapper")
3037 (description "APSW is a Python wrapper for the SQLite
3038embedded relational database engine. In contrast to other wrappers such as
3039pysqlite it focuses on being a minimal layer over SQLite attempting just to
3040translate the complete SQLite API into Python.")
3041 (license license:zlib)))
3042
3043(define-public python2-apsw
3044 (package-with-python2 python-apsw))
3045
ba0b249d
LDB
3046(define-public python-aiosqlite
3047 (package
3048 (name "python-aiosqlite")
4b800bff 3049 (version "0.12.0")
ba0b249d
LDB
3050 (source
3051 (origin
3052 (method url-fetch)
3053 (uri (pypi-uri "aiosqlite" version))
3054 (sha256
3055 (base32
4b800bff 3056 "1w8248yz85xyzvvh4jaxnc59fqil45aka6h82kn1rcih4rjxbnn1"))))
ba0b249d
LDB
3057 (build-system python-build-system)
3058 (native-inputs
3059 `(("python-aiounittest" ,python-aiounittest)))
3060 (home-page "https://github.com/jreese/aiosqlite")
3061 (synopsis
3062 "Asyncio bridge for sqlite3")
3063 (description
3064 "The package aiosqlite replicates the standard sqlite3 module, but with
3065async versions of all the standard connection and cursor methods, and context
3066managers for automatically closing connections.")
3067 (license license:expat)))
3068
a8714bf6
RW
3069(define-public python2-neo4j-driver
3070 (package
3071 (name "python2-neo4j-driver")
3072 ;; NOTE: When upgrading to 1.5.0, please add a python3 variant.
3073 (version "1.4.0")
3074 (source (origin
3075 (method url-fetch)
3076 (uri (pypi-uri "neo4j-driver" version))
3077 (sha256
3078 (base32
3079 "011r1vh182p8mm83d8dz9rfnc3l7rf7fd00cyrbyfzi71jmc4g98"))))
3080 (build-system python-build-system)
3081 (arguments
3082 `(#:python ,python-2))
3083 (home-page "https://neo4j.com/developer/python/")
3084 (synopsis "Neo4j driver code written in Python")
3085 (description "This package provides the Neo4j Python driver that connects
3086to the database using Neo4j's binary protocol. It aims to be minimal, while
3087being idiomatic to Python.")
3088 (license license:asl2.0)))
3089
3090(define-public python2-py2neo
3091 (package
3092 (name "python2-py2neo")
3093 (version "3.1.2")
3094 (source (origin
3095 (method url-fetch)
3096 (uri (pypi-uri "py2neo" version))
3097 (sha256
3098 (base32
3099 "1f1q95vqcvlc3nsc33p841swnjdcjazddlq2dzi3qfnjqjrajxw1"))))
3100 (build-system python-build-system)
3101 (arguments
3102 `(#:python ,python-2))
1084e86b 3103 (home-page "https://py2neo.org")
a8714bf6
RW
3104 (synopsis "Library and toolkit for working with Neo4j in Python")
3105 (description "This package provides a client library and toolkit for
3106working with Neo4j from within Python applications and from the command
3107line. The core library has no external dependencies and has been carefully
3108designed to be easy and intuitive to use.")
3109 (license license:asl2.0)))
3110
3111(define-public python-psycopg2
3112 (package
3113 (name "python-psycopg2")
dc2f0e70 3114 (version "2.8.6")
a8714bf6
RW
3115 (source
3116 (origin
3117 (method url-fetch)
3118 (uri (pypi-uri "psycopg2" version))
3119 (sha256
dc2f0e70 3120 (base32 "0hzmk6b1hb5riqkljr5xics6p4zbvmis6knbczb7zhq7273zc8zv"))))
a8714bf6
RW
3121 (build-system python-build-system)
3122 (arguments
3123 ;; Tests would require a postgresql database "psycopg2_test"
3124 ;; and a running postgresql database management service.
3125 `(#:tests? #f)) ; TODO re-enable after providing a test-db.
3126 (inputs
3127 `(("postgresql" ,postgresql))) ; libpq
3128 (home-page "http://initd.org/psycopg/")
3129 (synopsis "Python PostgreSQL adapter")
3130 (description
19601e89
BW
3131 "psycopg2 is a thread-safe PostgreSQL adapter that implements DB-API
31322.0.")
a8714bf6
RW
3133 (license license:lgpl3+)))
3134
3135(define-public python2-psycopg2
3136 (package-with-python2 python-psycopg2))
3137
3138(define-public python-sadisplay
3139 (package
3140 (name "python-sadisplay")
bcdc5cae 3141 (version "0.4.8")
a8714bf6
RW
3142 (source
3143 (origin
3144 (method url-fetch)
3145 (uri (pypi-uri "sadisplay" version))
3146 (sha256
3147 (base32
bcdc5cae 3148 "01d9lxhmgpb68gy8rd6zj6fcwp84n2qq210n1qsk3qbsir79bzh4"))))
a8714bf6
RW
3149 (build-system python-build-system)
3150 (propagated-inputs
3151 `(("python-sqlalchemy" ,python-sqlalchemy)))
3152 (native-inputs
bcdc5cae 3153 ;; For tests.
a8714bf6
RW
3154 `(("python-nose" ,python-nose)))
3155 (home-page "https://bitbucket.org/estin/sadisplay")
3156 (synopsis "SQLAlchemy schema displayer")
3157 (description "This package provides a program to build Entity
3158Relationship diagrams from a SQLAlchemy model (or directly from the
3159database).")
3160 (license license:bsd-3)))
3161
3162(define-public python2-sadisplay
3163 (package-with-python2 python-sadisplay))
3164
945ec6c3
VM
3165(define-public yoyo-migrations
3166 (package
3167 (name "yoyo-migrations")
3168 (version "7.2.0")
3169 (source
3170 (origin
3171 ;; We use the upstream repository, as the tests are not included in the
3172 ;; PyPI releases.
3173 (method hg-fetch)
3174 (uri (hg-reference
3175 (url "https://hg.sr.ht/~olly/yoyo")
3176 (changeset (string-append "v" version "-release"))))
3177 (file-name (string-append name "-" version "-checkout"))
3178 (sha256
3179 (base32 "0q2z9bgdj3wyix7yvqsayfs21grp5av8ilh411lgmjhigszkvhcq"))))
3180 (build-system python-build-system)
3181 (arguments
3182 ;; XXX: Tests require a connection to some pgsql database and psycopg
3183 ;; fails to connect to it.
3184 '(#:tests? #f))
3185 (propagated-inputs
3186 `(("python-sqlparse" ,python-sqlparse)
3187 ("python-tabulate" ,python-tabulate)))
3188 (home-page "https://ollycope.com/software/yoyo/latest/")
3189 (synopsis "Database migrations with SQL")
3190 (description
3191 "Yoyo is a database schema migration tool. Migrations are written as SQL
3192files or Python scripts that define a list of migration steps.")
3193 (license license:asl2.0)))
3194
a8714bf6
RW
3195(define-public python-mysqlclient
3196 (package
3197 (name "python-mysqlclient")
5ec1feca 3198 (version "2.0.1")
a8714bf6
RW
3199 (source
3200 (origin
3201 (method url-fetch)
3202 (uri (pypi-uri "mysqlclient" version))
3203 (sha256
3204 (base32
5ec1feca 3205 "1rf5l8hazs3v18hmcrm90z3hi9wxv553ipwd5l6kj8j7l6p7abzv"))))
a8714bf6 3206 (build-system python-build-system)
eec6a694 3207 (arguments '(#:tests? #f)) ;XXX: requires a live database
a8714bf6 3208 (inputs
997abda9 3209 `(("mysql-dev" ,mariadb "dev")))
a8714bf6
RW
3210 (home-page "https://github.com/PyMySQL/mysqlclient-python")
3211 (synopsis "MySQLdb is an interface to the popular MySQL database server for Python")
3212 (description "MySQLdb is an interface to the popular MySQL database server
3213for Python. The design goals are:
3214@enumerate
3215@item Compliance with Python database API version 2.0 [PEP-0249],
3216@item Thread-safety,
3217@item Thread-friendliness (threads will not block each other).
3218@end enumerate")
3219 (license license:gpl2)))
3220
a8714bf6
RW
3221(define-public python-hiredis
3222 (package
3223 (name "python-hiredis")
3224 (version "0.2.0")
3225 (source
3226 (origin
3227 (method url-fetch)
3228 (uri (pypi-uri "hiredis" version))
3229 (sha256
3230 (base32
3231 "1dfm2k9l9zar9nw9fwmm74zrgraxdxs04vx9li56fjcf289qx5fa"))))
3232 (build-system python-build-system)
3233 (arguments
3234 ;; no tests
3235 `(#:tests? #f))
3236 (home-page "https://github.com/redis/hiredis-py")
3237 (synopsis "Python extension that wraps protocol parsing code in hiredis")
3238 (description "Python-hiredis is a python extension that wraps protocol
3239parsing code in hiredis. It primarily speeds up parsing of multi bulk replies.")
3240 (license license:bsd-3)))
3241
3242(define-public python2-hiredis
3243 (package-with-python2 python-hiredis))
3244
3245(define-public python-fakeredis
3246 (package
3247 (name "python-fakeredis")
1655e7be 3248 (version "1.2.1")
a8714bf6
RW
3249 (source
3250 (origin
3251 (method url-fetch)
3252 (uri (pypi-uri "fakeredis" version))
3253 (sha256
3254 (base32
1655e7be 3255 "1s12mn4q4hz7402139khn9fx56kibj7nn0d6w81hn0zs07b90wpc"))))
a8714bf6
RW
3256 (build-system python-build-system)
3257 (arguments
3258 ;; no tests
3259 `(#:tests? #f))
1655e7be
TLC
3260 (propagated-inputs
3261 `(("python-sortedcontainers" ,python-sortedcontainers)))
a8714bf6
RW
3262 (home-page "https://github.com/jamesls/fakeredis")
3263 (synopsis "Fake implementation of redis API for testing purposes")
a4764ff0
TGR
3264 (description
3265 "Fakeredis is a pure-Python implementation of the redis-py Python client
3266that simulates talking to a redis server. It was created for a single purpose:
3267to write unit tests.
3268
3269Setting up redis is not hard, but one often wants to write unit tests that don't
3270talk to an external server such as redis. This module can be used as a
3271reasonable substitute.")
a8714bf6
RW
3272 (license license:bsd-3)))
3273
3274(define-public python2-fakeredis
3275 (package-with-python2 python-fakeredis))
3276
3277(define-public python-redis
3278 (package
3279 (name "python-redis")
d87252e6 3280 (version "3.5.3")
a8714bf6
RW
3281 (source
3282 (origin
3283 (method url-fetch)
3284 (uri (pypi-uri "redis" version))
3285 (sha256
d87252e6 3286 (base32 "18h5b87g15x3j6pb1h2q27ri37p2qpvc9n2wgn5yl3b6m3y0qzhf"))))
a8714bf6 3287 (build-system python-build-system)
a263a976 3288 ;; Tests require a running Redis server.
a8714bf6
RW
3289 (arguments '(#:tests? #f))
3290 ;; As long as we are not running test, we do not need this input :-)
3291 ;;(native-inputs
3292 ;; `(("python-pytest" ,python-pytest)))
3293 (home-page "https://github.com/andymccurdy/redis-py")
3294 (synopsis "Redis Python client")
3295 (description
3296 "This package provides a Python interface to the Redis key-value store.")
3297 (license license:expat)))
3298
3299(define-public python2-redis
3300 (package-with-python2 python-redis))
3301
3302(define-public python-rq
3303 (package
3304 (name "python-rq")
4436a27c 3305 (version "1.5.2")
a8714bf6
RW
3306 (source
3307 (origin
b462caaf
MB
3308 (method git-fetch)
3309 (uri (git-reference
3310 (url "https://github.com/rq/rq")
3311 (commit (string-append "v" version))))
3312 (file-name (git-file-name name version))
a8714bf6 3313 (sha256
4436a27c 3314 (base32 "0ikqmpq0g1qiqwd7ar1286l4hqjb6aj2wr844gihhb8ijzwhp8va"))))
a8714bf6 3315 (build-system python-build-system)
b462caaf
MB
3316 (arguments
3317 '(#:phases (modify-phases %standard-phases
3318 (add-before 'check 'start-redis
3319 (lambda _
3320 (invoke "redis-server" "--daemonize" "yes")))
3321 (replace 'check
3322 (lambda* (#:key outputs #:allow-other-keys)
3323 (let ((out (assoc-ref outputs "out")))
3324 ;; Drop test that needs the SDK for Sentry.io.
3325 (delete-file "tests/test_sentry.py")
3326 ;; Ensure 'rq' and 'rqworker' ends up on PATH.
3327 (setenv "PATH" (string-append out "/bin:"
3328 (getenv "PATH")))
3329 (invoke "pytest" "-vv")))))))
3330 (native-inputs
3331 `(("python-mock" ,python-mock)
3332 ("python-pytest" ,python-pytest)
3333 ("redis" ,redis)))
a8714bf6
RW
3334 (propagated-inputs
3335 `(("python-click" ,python-click)
3336 ("python-redis" ,python-redis)))
4e5ad79e 3337 (home-page "https://python-rq.org/")
a8714bf6
RW
3338 (synopsis "Simple job queues for Python")
3339 (description
3340 "RQ (Redis Queue) is a simple Python library for queueing jobs and
3341processing them in the background with workers. It is backed by Redis and it
3342is designed to have a low barrier to entry.")
3343 (license license:bsd-2)))
3344
3345(define-public python2-rq
3346 (package-with-python2 python-rq))
3347
8a88efce
MB
3348(define-public python-rq-scheduler
3349 (package
3350 (name "python-rq-scheduler")
3351 (version "0.10.0")
3352 (home-page "https://github.com/rq/rq-scheduler")
3353 (source (origin
3354 (method git-fetch)
3355 (uri (git-reference
3356 (url home-page)
3357 (commit (string-append "v" version))))
3358 (file-name (git-file-name name version))
3359 (sha256
3360 (base32
3361 "0xg6yazqs5kbr2ayvhvljs1h5vgx5k5dds613fmhswln7gglf9hk"))))
3362 (build-system python-build-system)
3363 (arguments
3364 '(#:phases (modify-phases %standard-phases
3365 (add-before 'check 'start-redis
3366 (lambda _
3367 (invoke "redis-server" "--daemonize" "yes")))
3368 (replace 'check
3369 (lambda _
3370 (substitute* "run_tests.py"
3371 (("/usr/bin/env")
3372 (which "env")))
3373 (invoke "./run_tests.py"))))))
3374 (native-inputs
3375 `(("redis" ,redis)
3376 ("which" ,which)))
3377 (propagated-inputs
3378 `(("python-croniter" ,python-croniter)
3379 ("python-rq" ,python-rq)))
3380 (synopsis "Job scheduling capabilities for RQ (Redis Queue)")
3381 (description
3382 "This package provides job scheduling capabilities to @code{python-rq}
3383(Redis Queue).")
3384 (license license:expat)))
3385
a8714bf6
RW
3386(define-public python-trollius-redis
3387 (package
3388 (name "python-trollius-redis")
3389 (version "0.1.4")
3390 (source
3391 (origin
3392 (method url-fetch)
3393 (uri (pypi-uri "trollius_redis" version))
3394 (sha256
3395 (base32
3396 "0k3vypszmgmaipgw9xscvgm79h2zd6p6ci8gdp5sxl6g5kbqr9fy"))))
3397 (build-system python-build-system)
3398 ;; TODO: Tests require packaging 'hiredis'.
3399 (arguments '(#:tests? #f))
3400 (home-page "https://github.com/benjolitz/trollius-redis")
3401 (synopsis "Port of asyncio-redis to trollius")
3402 (description "@code{trollius-redis} is a Redis client for Python
d087a3a6 3403 trollius. It is an asynchronous IO (PEP 3156) implementation of the
a8714bf6
RW
3404 Redis protocol.")
3405 (license license:bsd-2)))
3406
3407(define-public python2-trollius-redis
3408 (package-with-python2 python-trollius-redis))
3409
3410(define-public python-sqlparse
3411 (package
3412 (name "python-sqlparse")
d343e0fe 3413 (version "0.3.1")
a8714bf6
RW
3414 (source (origin
3415 (method url-fetch)
3416 (uri (pypi-uri "sqlparse" version))
3417 (sha256
3418 (base32
d343e0fe 3419 "0j652a6z7bdf6c77aczfn8m8b2nsr1bcqq48wzghf8vi6wvj0qp1"))))
a8714bf6
RW
3420 (build-system python-build-system)
3421 (arguments
3422 `(#:phases
3423 (modify-phases %standard-phases
3424 (replace 'check
96272e28 3425 (lambda _ (invoke "py.test"))))))
a8714bf6
RW
3426 (native-inputs
3427 `(("python-pytest" ,python-pytest)))
3428 (home-page "https://github.com/andialbrecht/sqlparse")
3429 (synopsis "Non-validating SQL parser")
3430 (description "Sqlparse is a non-validating SQL parser for Python. It
3431provides support for parsing, splitting and formatting SQL statements.")
3432 (license license:bsd-3)))
3433
3434(define-public python2-sqlparse
3435 (package-with-python2 python-sqlparse))
3436
3437(define-public python-sql
3438 (package
3439 (name "python-sql")
909404b5 3440 (version "1.0.0")
a8714bf6
RW
3441 (source
3442 (origin
3443 (method url-fetch)
3444 (uri (pypi-uri "python-sql" version))
3445 (sha256
909404b5 3446 (base32 "05ni936y0ia9xmryl7mlhbj9i80nnvq1bi4zxhb96rv7yvpb3fqb"))))
a8714bf6
RW
3447 (build-system python-build-system)
3448 (home-page "https://python-sql.tryton.org/")
3449 (synopsis "Library to write SQL queries in a pythonic way")
3450 (description "@code{python-sql} is a library to write SQL queries, that
3451transforms idiomatic python function calls to well-formed SQL queries.")
3452 (license license:bsd-3)))
3453
3454(define-public python2-sql
3455 (package-with-python2 python-sql))
33c88fcb 3456
c8fdf86d
LDB
3457(define-public python-pypika
3458 (package
3459 (name "python-pypika")
da384d99 3460 (version "0.44.0")
c8fdf86d 3461 (source
510472f8
LDB
3462 (origin (method git-fetch)
3463 (uri (git-reference
b0e7b699 3464 (url "https://github.com/kayak/pypika")
510472f8
LDB
3465 (commit (string-append "v" version))))
3466 (file-name (git-file-name name version))
3467 (sha256
3468 (base32
da384d99 3469 "0mpddrw9z1pzcc40j3pzhd583hlgjx96aa8ak6m9zzhpm4bv3ard"))))
c8fdf86d
LDB
3470 (build-system python-build-system)
3471 (native-inputs
3472 `(("python-parameterized" ,python-parameterized)))
3473 (home-page "https://github.com/kayak/pypika")
3474 (synopsis "SQL query builder API for Python")
3475 (description
3476 "PyPika is a python SQL query builder that exposes the full richness of
3477the SQL language using a syntax that reflects the resulting query.")
3478 (license license:asl2.0)))
3479
33c88fcb
CB
3480(define-public mongo-tools
3481 (package
3482 (name "mongo-tools")
3483 (version "3.4.0")
3484 (source
3485 (origin (method git-fetch)
3486 (uri (git-reference
3487 (url "https://github.com/mongodb/mongo-tools")
3488 (commit (string-append "r" version))))
3489 (file-name (git-file-name name version))
3490 (sha256
3491 (base32
9b32bf6e 3492 "1bcsz5cvj39a7nsxsfqmz9igrw33j6yli9kffigqyscs52amw7x1"))))
33c88fcb
CB
3493 (build-system go-build-system)
3494 (arguments
9b32bf6e
CB
3495 `(#:import-path "github.com/mongodb/mongo-tools"
3496 #:modules ((srfi srfi-1)
3497 (guix build go-build-system)
3498 (guix build utils))
e3900a4d 3499 #:install-source? #f
33c88fcb 3500 #:phases
9b32bf6e
CB
3501 (let ((all-tools
3502 '("bsondump" "mongodump" "mongoexport" "mongofiles"
3503 "mongoimport" "mongooplog" "mongorestore"
3504 "mongostat" "mongotop")))
3505 (modify-phases %standard-phases
3506 (add-after 'unpack 'delete-bundled-source-code
3507 (lambda _
3508 (delete-file-recursively
3509 "src/github.com/mongodb/mongo-tools/vendor")
3510 #t))
fe596965
CB
3511 (add-after 'delete-bundled-source-code 'patch-source
3512 (lambda _
3513 ;; Remove a redundant argument that causes compilation to fail.
3514 (substitute*
3515 "src/github.com/mongodb/mongo-tools/mongorestore/filepath.go"
3516 (("skipping restore of system.profile collection\", db)")
3517 "skipping restore of system.profile collection\")"))
3518 #t))
9b32bf6e
CB
3519 (replace 'build
3520 (lambda _
96272e28
MW
3521 (for-each (lambda (tool)
3522 (let ((command
3523 `("go" "build"
3524 ;; This is where the tests expect to find the
3525 ;; executables
3526 "-o" ,(string-append
3527 "src/github.com/mongodb/mongo-tools/bin/"
3528 tool)
3529 "-v"
3530 "-tags=\"ssl sasl\""
3531 "-ldflags"
3532 "-extldflags=-Wl,-z,now,-z,relro"
3533 ,(string-append
3534 "src/github.com/mongodb/mongo-tools/"
3535 tool "/main/" tool ".go"))))
3536 (simple-format #t "build: running ~A\n"
3537 (string-join command))
3538 (apply invoke command)))
3539 all-tools)
3540 #t))
9b32bf6e
CB
3541 (replace 'check
3542 (lambda _
3543 (with-directory-excursion "src"
96272e28
MW
3544 (for-each (lambda (tool)
3545 (invoke
3546 "go" "test" "-v"
3547 (string-append "github.com/mongodb/mongo-tools/"
3548 tool)))
3549 all-tools))
3550 #t))
9b32bf6e
CB
3551 (replace 'install
3552 (lambda* (#:key outputs #:allow-other-keys)
3553 (for-each (lambda (tool)
3554 (install-file
96272e28
MW
3555 (string-append "src/github.com/mongodb/mongo-tools/bin/"
3556 tool)
9b32bf6e
CB
3557 (string-append (assoc-ref outputs "out")
3558 "/bin")))
96272e28
MW
3559 all-tools)
3560 #t))))))
33c88fcb
CB
3561 (native-inputs
3562 `(("go-github.com-howeyc-gopass" ,go-github.com-howeyc-gopass)
3563 ("go-github.com-jessevdk-go-flags" ,go-github.com-jessevdk-go-flags)
561d391b 3564 ("go-golang-org-x-crypto" ,go-golang-org-x-crypto)
33c88fcb
CB
3565 ("go-gopkg.in-mgo.v2" ,go-gopkg.in-mgo.v2)
3566 ("go-gopkg.in-tomb.v2" ,go-gopkg.in-tomb.v2)
9b32bf6e
CB
3567 ("go-github.com-nsf-termbox-go" ,go-github.com-nsf-termbox-go)
3568 ("go-github.com-smartystreets-goconvey" ,go-github.com-smartystreets-goconvey)))
33c88fcb
CB
3569 (home-page "https://github.com/mongodb/mongo-tools")
3570 (synopsis "Various tools for interacting with MongoDB and BSON")
3571 (description
3572 "This package includes a collection of tools related to MongoDB.
3573@table @code
3574@item bsondump
3575Display BSON files in a human-readable format
3576@item mongoimport
3577Convert data from JSON, TSV or CSV and insert them into a collection
3578@item mongoexport
3579Write an existing collection to CSV or JSON format
3580@item mongodump/mongorestore
3581Dump MongoDB backups to disk in the BSON format
3582@item mongorestore
3583Read MongoDB backups in the BSON format, and restore them to a live database
3584@item mongostat
3585Monitor live MongoDB servers, replica sets, or sharded clusters
3586@item mongofiles
3587Read, write, delete, or update files in GridFS
3588@item mongooplog
3589Replay oplog entries between MongoDB servers
3590@item mongotop
3591Monitor read/write activity on a mongo server
3592@end table")
3593 (license license:asl2.0)))
dae7661a 3594
a50628bb
KCB
3595;; There are many wrappers for this in other languages. When touching, please
3596;; be sure to ensure all dependencies continue to build.
dae7661a
LF
3597(define-public apache-arrow
3598 (package
3599 (name "apache-arrow")
a50628bb 3600 (version "0.17.1")
dae7661a 3601 (source
a50628bb
KCB
3602 (origin
3603 (method git-fetch)
3604 (uri (git-reference
3605 (url "https://github.com/apache/arrow")
3606 (commit (string-append "apache-arrow-" version))))
3607 (file-name (git-file-name name version))
3608 (sha256
3609 (base32
3610 "02r6yx3yhywzikd3b0vfkjgddhfiriyx2vpm3jf5880wq59x798a"))))
dae7661a
LF
3611 (build-system cmake-build-system)
3612 (arguments
3613 `(#:tests? #f
3614 #:phases
3615 (modify-phases %standard-phases
3616 (add-before 'configure 'enter-source-directory
3617 (lambda _ (chdir "cpp") #t))
3618 (add-after 'unpack 'set-env
3619 (lambda _
3620 (setenv "BOOST_ROOT" (assoc-ref %build-inputs "boost"))
3621 (setenv "BROTLI_HOME" (assoc-ref %build-inputs "brotli"))
3622 (setenv "FLATBUFFERS_HOME" (assoc-ref %build-inputs "flatbuffers"))
dae7661a
LF
3623 (setenv "RAPIDJSON_HOME" (assoc-ref %build-inputs "rapidjson"))
3624 #t)))
3def739d 3625 #:build-type "Release"
dae7661a 3626 #:configure-flags
3def739d 3627 (list "-DARROW_PYTHON=ON"
a50628bb
KCB
3628 "-DARROW_GLOG=ON"
3629 ;; Parquet options
3630 "-DARROW_PARQUET=ON"
3631 "-DPARQUET_BUILD_EXECUTABLES=ON"
3632 ;; The maintainers disallow using system versions of
3633 ;; jemalloc:
3634 ;; https://issues.apache.org/jira/browse/ARROW-3507. This
3635 ;; is unfortunate because jemalloc increases performance:
3636 ;; https://arrow.apache.org/blog/2018/07/20/jemalloc/.
3637 "-DARROW_JEMALLOC=OFF"
3638
3639 ;; The CMake option ARROW_DEPENDENCY_SOURCE is a global
3640 ;; option that instructs the build system how to resolve
3641 ;; each dependency. SYSTEM = Finding the dependency in
3642 ;; system paths using CMake's built-in find_package
3643 ;; function, or using pkg-config for packages that do not
3644 ;; have this feature
3645 "-DARROW_DEPENDENCY_SOURCE=SYSTEM"
3646
3647 ;; Split output into its component packages.
3648 (string-append "-DCMAKE_INSTALL_PREFIX="
3649 (assoc-ref %outputs "lib"))
3650 (string-append "-DCMAKE_INSTALL_RPATH="
3651 (assoc-ref %outputs "lib")
dae7661a 3652 "/lib")
a50628bb
KCB
3653 (string-append "-DCMAKE_INSTALL_BINDIR="
3654 (assoc-ref %outputs "out")
3655 "/bin")
3656 (string-append "-DCMAKE_INSTALL_INCLUDEDIR="
3657 (assoc-ref %outputs "include")
3658 "/share/include")
3659
3660
3661 "-DARROW_WITH_SNAPPY=ON"
3662 "-DARROW_WITH_ZLIB=ON"
3663 "-DARROW_WITH_ZSTD=ON"
3664 "-DARROW_WITH_LZ4=ON"
3665 "-DARROW_COMPUTE=ON"
3666 "-DARROW_CSV=ON"
3667 "-DARROW_DATASET=ON"
3668 "-DARROW_FILESYSTEM=ON"
3669 "-DARROW_HDFS=ON"
3670 "-DARROW_JSON=ON"
3671 ;; Arrow Python C++ integration library (required for
3672 ;; building pyarrow). This library must be built against
3673 ;; the same Python version for which you are building
3674 ;; pyarrow. NumPy must also be installed. Enabling this
3675 ;; option also enables ARROW_COMPUTE, ARROW_CSV,
3676 ;; ARROW_DATASET, ARROW_FILESYSTEM, ARROW_HDFS, and
3677 ;; ARROW_JSON.
3678 "-DARROW_PYTHON=ON"
dae7661a
LF
3679
3680 ;; Building the tests forces on all the
3681 ;; optional features and the use of static
3682 ;; libraries.
3683 "-DARROW_BUILD_TESTS=OFF"
a50628bb
KCB
3684 "-DBENCHMARK_ENABLE_GTEST_TESTS=OFF"
3685 ;;"-DBENCHMARK_ENABLE_TESTING=OFF"
dae7661a
LF
3686 "-DARROW_BUILD_STATIC=OFF")))
3687 (inputs
3688 `(("boost" ,boost)
dae7661a 3689 ("brotli" ,google-brotli)
a50628bb
KCB
3690 ("double-conversion" ,double-conversion)
3691 ("snappy" ,snappy)
3692 ("gflags" ,gflags)
3693 ("glog" ,glog)
3694 ("apache-thrift" ,apache-thrift "lib")
3695 ("protobuf" ,protobuf)
3696 ("rapidjson" ,rapidjson)
3697 ("zlib" ,zlib)
3698 ("bzip2" ,bzip2)
3699 ("lz4" ,lz4)
3700 ("zstd" ,zstd "lib")
3701 ("re2" ,re2)
3702 ("grpc" ,grpc)
dae7661a
LF
3703 ("python-3" ,python)
3704 ("python-numpy" ,python-numpy)))
a50628bb
KCB
3705 (native-inputs
3706 `(("pkg-config" ,pkg-config)))
3707 (outputs '("out" "lib" "include"))
dae7661a
LF
3708 (home-page "https://arrow.apache.org/")
3709 (synopsis "Columnar in-memory analytics")
3710 (description "Apache Arrow is a columnar in-memory analytics layer
a50628bb 3711designed to accelerate big data. It houses a set of canonical in-memory
dae7661a 3712representations of flat and hierarchical data along with multiple
a50628bb 3713language-bindings for structure manipulation. It also provides IPC and common
dae7661a
LF
3714algorithm implementations.")
3715 (license license:asl2.0)))
5e5ac710
LF
3716
3717(define-public python-pyarrow
3718 (package
a50628bb 3719 (inherit apache-arrow)
5e5ac710 3720 (name "python-pyarrow")
5e5ac710
LF
3721 (build-system python-build-system)
3722 (arguments
a50628bb 3723 '(#:tests? #f ; XXX There are no tests in the "python" directory
5e5ac710
LF
3724 #:phases
3725 (modify-phases %standard-phases
0fa926c2 3726 (delete 'build) ; XXX the build is performed again during the install phase
5e5ac710
LF
3727 (add-after 'unpack 'enter-source-directory
3728 (lambda _ (chdir "python") #t))
a50628bb 3729 (add-after 'unpack 'make-git-checkout-writable
5e5ac710 3730 (lambda _
a50628bb 3731 (for-each make-file-writable (find-files "."))
5e5ac710
LF
3732 #t)))))
3733 (propagated-inputs
a50628bb 3734 `(("apache-arrow" ,apache-arrow "lib")
5e5ac710
LF
3735 ("python-numpy" ,python-numpy)
3736 ("python-pandas" ,python-pandas)
3737 ("python-six" ,python-six)))
3738 (native-inputs
c69959f0 3739 `(("cmake" ,cmake-minimal)
a50628bb 3740 ("pkg-config" ,pkg-config)
5e5ac710
LF
3741 ("python-cython" ,python-cython)
3742 ("python-pytest" ,python-pytest)
0fa926c2 3743 ("python-pytest-runner" ,python-pytest-runner)
5e5ac710 3744 ("python-setuptools-scm" ,python-setuptools-scm)))
a50628bb 3745 (outputs '("out"))
5e5ac710
LF
3746 (home-page "https://arrow.apache.org/docs/python/")
3747 (synopsis "Python bindings for Apache Arrow")
a50628bb
KCB
3748 (description
3749 "This library provides a Pythonic API wrapper for the reference Arrow C++
3750implementation, along with tools for interoperability with pandas, NumPy, and
3751other traditional Python scientific computing packages.")
5e5ac710
LF
3752 (license license:asl2.0)))
3753
3754(define-public python2-pyarrow
3755 (package-with-python2 python-pyarrow))
450d5dc2
PL
3756
3757(define-public python-crate
3758 (package
3759 (name "python-crate")
19181820 3760 (version "0.23.2")
450d5dc2
PL
3761 (source (origin
3762 (method url-fetch)
3763 (uri (pypi-uri "crate" version))
3764 (sha256
3765 (base32
19181820 3766 "0ngmlvi320c5gsxab0s7qgq0ck4jdlcwvb6lbjhnfprafdp56vvx"))))
450d5dc2
PL
3767 (build-system python-build-system)
3768 (propagated-inputs
3769 `(("python-urllib3" ,python-urllib3)))
3770 (home-page "https://github.com/crate/crate-python")
3771 (synopsis "CrateDB Python client")
3772 (description
3773 "This package provides a Python client library for CrateDB.
3774It implements the Python DB API 2.0 specification and includes support for
3775SQLAlchemy.")
3776 (license license:asl2.0)))
ae8a0184
GLV
3777
3778(define-public libdbi
3779 (package
3780 (name "libdbi")
3781 (version "0.9.0")
3782 (source (origin
3783 (method url-fetch)
3784 (uri (string-append "mirror://sourceforge/libdbi/libdbi/libdbi-"
3785 version "/libdbi-" version ".tar.gz"))
3786 (sha256
3787 (base32
3788 "00s5ra7hdlq25iv23nwf4h1v3kmbiyzx0v9bhggjiii4lpf6ryys"))))
3789 (build-system gnu-build-system)
3790 (synopsis "Database independent abstraction layer in C")
3791 (description
3792 "This library implements a database independent abstraction layer in C,
3793similar to the DBI/DBD layer in Perl. Writing one generic set of code,
3794programmers can leverage the power of multiple databases and multiple
3795simultaneous database connections by using this framework.")
3796 (home-page "http://libdbi.sourceforge.net/")
3797 (license license:lgpl2.1+)))
df81de86
GLV
3798
3799(define-public libdbi-drivers
3800 (package
3801 (name "libdbi-drivers")
3802 (version "0.9.0")
3803 (source (origin
3804 (method url-fetch)
3805 (uri (string-append "mirror://sourceforge/libdbi-drivers/"
3806 "libdbi-drivers/libdbi-drivers-" version
3807 "/libdbi-drivers-" version ".tar.gz"))
3808 (sha256
3809 (base32
3810 "0m680h8cc4428xin4p733azysamzgzcmv4psjvraykrsaz6ymlj3"))))
3811 (build-system gnu-build-system)
3812 (native-inputs
9077cf68
MB
3813 `(;; For tests.
3814 ("inetutils" ,inetutils)
3815 ("glibc-locales" ,glibc-locales)
ca69163c 3816 ("mariadb" ,mariadb)))
df81de86
GLV
3817 (inputs
3818 `(("libdbi" ,libdbi)
9077cf68
MB
3819 ("mariadb:dev" ,mariadb "dev")
3820 ("mariadb:lib" ,mariadb "lib")
df81de86
GLV
3821 ("postgresql" ,postgresql)
3822 ("sqlite" ,sqlite)))
3823 (arguments
3824 `(#:configure-flags
3825 (let ((libdbi (assoc-ref %build-inputs "libdbi"))
9077cf68
MB
3826 (mysql:inc (assoc-ref %build-inputs "mariadb:dev"))
3827 (mysql:lib (assoc-ref %build-inputs "mariadb:lib"))
df81de86
GLV
3828 (postgresql (assoc-ref %build-inputs "postgresql"))
3829 (sqlite (assoc-ref %build-inputs "sqlite")))
3830 (list "--disable-docs"
3831 (string-append "--with-dbi-incdir=" libdbi "/include")
3832 (string-append "--with-dbi-libdir=" libdbi "/lib")
3833 "--with-mysql"
9077cf68
MB
3834 (string-append "--with-mysql-incdir=" mysql:inc "/include/mysql")
3835 (string-append "--with-mysql-libdir=" mysql:lib "/lib")
df81de86
GLV
3836 "--with-pgsql"
3837 (string-append "--with-pgsql-incdir=" postgresql "/include")
3838 (string-append "--with-pgsql-libdir=" postgresql "/lib")
3839 "--with-sqlite3"
3840 (string-append "--with-sqlite-incdir=" sqlite "/include")
3841 (string-append "--with-sqlite-libdir=" sqlite "/lib")))
3842 #:phases
3843 (modify-phases %standard-phases
3844 (add-after 'unpack 'fix-tests
3845 (lambda* (#:key inputs #:allow-other-keys)
3846 (substitute* "tests/test_mysql.sh"
3847 (("^MYMYSQLD=.*")
3848 (string-append "MYMYSQLD="
9077cf68 3849 (assoc-ref inputs "mariadb")
df81de86
GLV
3850 "/bin/mysqld")))
3851 #t))
3852 (add-after 'install 'remove-empty-directories
3853 (lambda* (#:key outputs #:allow-other-keys)
3854 (let ((var (string-append (assoc-ref outputs "out") "/var")))
3855 (delete-file-recursively var))
3856 #t)))))
3857 (synopsis "Database drivers for the libdbi framework")
3858 (description
3859 "The @code{libdbi-drivers} library provides the database specific drivers
3860for the @code{libdbi} framework.
3861
3862The drivers officially supported by @code{libdbi} are:
3863@itemize
3864@item MySQL,
3865@item PostgreSQL,
3866@item SQLite.
3867@end itemize")
3868 (home-page "http://libdbi-drivers.sourceforge.net/")
3869 (license license:lgpl2.1+)))
6d26ee3b
PN
3870
3871(define-public soci
3872 (package
3873 (name "soci")
d8fe4554 3874 (version "4.0.1")
6d26ee3b
PN
3875 (source (origin
3876 (method git-fetch)
3877 (uri (git-reference
3878 (url "https://github.com/SOCI/soci/")
3879 (commit version)))
3880 (file-name (git-file-name name version))
3881 (sha256
3882 (base32
d8fe4554 3883 "14x2gjblkgpflv75wl144cyjp1sis5rbxnr9r2gj3yw16v2av0bp"))))
6d26ee3b
PN
3884 (build-system cmake-build-system)
3885 (inputs
691c4185
TGR
3886 `(("firebird" ,firebird)
3887 ("postgresql" ,postgresql)
6d26ee3b
PN
3888 ("sqlite" ,sqlite)
3889 ("odbc" ,unixodbc)
3890 ("boost" ,boost)
997abda9 3891 ("mariadb:dev" ,mariadb "dev")))
6d26ee3b 3892 (arguments
d8fe4554
TGR
3893 `(#:configure-flags
3894 ;; C++11 (-DSOCI_CXX11) is OFF by default. hyperledger-iroha needs it.
28da3c19
TGR
3895 (list "-DCMAKE_CXX_STANDARD=17"
3896 "-DSOCI_LIBDIR=lib")
3897 #:tests? #f)) ; may require running database management systems
6d26ee3b
PN
3898 (synopsis "C++ Database Access Library")
3899 (description
3900 "SOCI is an abstraction layer for several database backends, including
3901PostreSQL, SQLite, ODBC and MySQL.")
3902 (home-page "http://soci.sourceforge.net/")
3903 (license license:boost1.0)))