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gnu: pigx-rnaseq: Fix Python module capture.
author
Ricardo Wurmus
<rekado@elephly.net>
Thu, 27 Jan 2022 21:06:26 +0000
(22:06 +0100)
committer
Ricardo Wurmus
<rekado@elephly.net>
Thu, 27 Jan 2022 21:15:25 +0000
(22:15 +0100)
The build system expects all Python modules to be on PYTHONPATH.
* gnu/packages/bioinformatics.scm (pigx-rnaseq)[arguments]: Set PYTHONPATH
variable in new build phase.
gnu/packages/bioinformatics.scm
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diff --git
a/gnu/packages/bioinformatics.scm
b/gnu/packages/bioinformatics.scm
index
c872c9c
..
e501c84
100644
(file)
--- a/
gnu/packages/bioinformatics.scm
+++ b/
gnu/packages/bioinformatics.scm
@@
-10895,6
+10895,9
@@
once. This package provides tools to perform Drop-seq analyses.")
(add-before 'bootstrap 'autoreconf
(lambda _
(invoke "autoreconf" "-vif")))
+ (add-before 'configure 'set-PYTHONPATH
+ (lambda _
+ (setenv "PYTHONPATH" (getenv "GUIX_PYTHONPATH"))))
(add-before 'check 'set-timezone
;; The readr package is picky about timezones.
(lambda* (#:key inputs #:allow-other-keys)