gnu: r-ldheatmap: Fix missing variable.
authorMathieu Othacehe <othacehe@gnu.org>
Tue, 29 Dec 2020 18:00:39 +0000 (19:00 +0100)
committerMathieu Othacehe <othacehe@gnu.org>
Tue, 29 Dec 2020 18:00:39 +0000 (19:00 +0100)
This is a follow-up of 61ec8928c7fee048fea37558508eb0a80022684b.

* gnu/packages/cran.scm (r-ldheatmap)[propagated-inputs]: Use 'module-ref' to
resolve r-snpstats variable which is located in (gnu package bioinformatics)
that cannot be included due to a circular dependency.

gnu/packages/cran.scm

index 10212e2..c0926d9 100644 (file)
@@ -14734,7 +14734,9 @@ inbred lines, F2 intercrosses, and association mapping populations.")
     (propagated-inputs
      `(("r-genetics" ,r-genetics)
        ("r-rcpp" ,r-rcpp)
-       ("r-snpstats" ,r-snpstats)))
+       ("r-snpstats" ,(module-ref
+                       (resolve-interface '(gnu packages bioconductor))
+                       'r-snpstats))))
     (home-page "https://stat.sfu.ca/statgen/research/ldheatmap.html")
     (synopsis "Graphical display of pairwise linkage disequilibria between SNPs")
     (description