1 ;;; GNU Guix --- Functional package management for GNU
2 ;;; Copyright © 2020, 2021 Nicolò Balzarotti <nicolo@nixo.xyz>
3 ;;; Copyright © 2021 Simon Tournier <zimon.toutoune@gmail.com>
4 ;;; Copyright © 2021 Efraim Flashner <efraim@flashner.co.il>
5 ;;; Copyright © 2021 Vinicius Monego <monego@posteo.net>
7 ;;; This file is part of GNU Guix.
9 ;;; GNU Guix is free software; you can redistribute it and/or modify it
10 ;;; under the terms of the GNU General Public License as published by
11 ;;; the Free Software Foundation; either version 3 of the License, or (at
12 ;;; your option) any later version.
14 ;;; GNU Guix is distributed in the hope that it will be useful, but
15 ;;; WITHOUT ANY WARRANTY; without even the implied warranty of
16 ;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
17 ;;; GNU General Public License for more details.
19 ;;; You should have received a copy of the GNU General Public License
20 ;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
22 (define-module (gnu packages julia-xyz)
23 #:use-module ((guix licenses) #:prefix license:)
24 #:use-module (gnu packages)
25 #:use-module (guix utils)
26 #:use-module (guix packages)
27 #:use-module (guix git-download)
28 #:use-module (guix build-system julia)
29 #:use-module (gnu packages gcc)
30 #:use-module (gnu packages julia-jll)
31 #:use-module (gnu packages python)
32 #:use-module (gnu packages python-xyz)
33 #:use-module (gnu packages version-control))
35 (define-public julia-abstractffts
37 (name "julia-abstractffts")
43 (url "https://github.com/JuliaMath/AbstractFFTS.jl")
44 (commit (string-append "v" version))))
45 (file-name (git-file-name name version))
47 (base32 "0083pwdyxjb04i330ir9pc8kmp4bwk59lx1jgc9qi05y8j7xzbp0"))))
48 (build-system julia-build-system)
49 (inputs ;required for tests
50 `(("julia-unitful" ,julia-unitful)))
51 (home-page "https://github.com/JuliaGPU/Adapt.jl")
52 (synopsis "General framework for fast Fourier transforms (FFTs)")
53 (description "This package allows multiple FFT packages to co-exist with
54 the same underlying @code{fft(x)} and @code{plan_fft(x)} interface. It is
55 mainly not intended to be used directly. Instead, developers of packages that
56 implement FFTs (such as @code{FFTW.jl} or @code{FastTransforms.jl}) extend the
57 types/functions defined in AbstractFFTs.")
58 (license license:expat)))
60 (define-public julia-abstracttrees
62 (name "julia-abstracttrees")
68 (url "https://github.com/JuliaCollections/AbstractTrees.jl")
69 (commit (string-append "v" version))))
70 (file-name (git-file-name name version))
72 (base32 "16is5n2qa69cci34vfazxsa7ik6q0hbnnqrbrhkq8frh142f1xs8"))))
73 (build-system julia-build-system)
74 (home-page "https://juliacollections.github.io/AbstractTrees.jl/stable/")
75 (synopsis "Abstract Julia interfaces for working with trees")
76 (description "This Julia package provides several utilities for working
77 with tree-like data structures. Most importantly, it defines the
78 @code{children} method that any package that contains such a data structure
79 may import and extend in order to take advantage of any generic tree algorithm
81 (license license:expat)))
83 (define-public julia-adapt
91 (url "https://github.com/JuliaGPU/Adapt.jl")
92 (commit (string-append "v" version))))
93 (file-name (git-file-name name version))
95 (base32 "009fj59fzhvfsyw35kakllsh36k3xlwyzq8qa5f5k598i3pq14i7"))))
96 (build-system julia-build-system)
97 (home-page "https://github.com/JuliaGPU/Adapt.jl")
98 (synopsis "Package providing the @code{adapt} function, similar to @code{convert}")
99 (description "This Julia package provides the @code{adapt(T, x)} function
100 acts like @code{convert(T, x)}, but without the restriction of returning a
101 @code{T}. This allows you to \"convert\" wrapper types like @code{Adjoint} to
102 be GPU compatible without throwing away the wrapper.")
103 (license license:expat)))
105 (define-public julia-ansicoloredprinters
107 (name "julia-ansicoloredprinters")
113 (url "https://github.com/JuliaDocs/ANSIColoredPrinters.jl")
114 (commit (string-append "v" version))))
115 (file-name (git-file-name name version))
117 (base32 "0dp5agljr0g50s5gn0pr70wrz01ggck6pb40ay3l4szhswq7mqzf"))))
118 (build-system julia-build-system)
119 (home-page "https://github.com/JuliaDocs/ANSIColoredPrinters.jl")
120 (synopsis "ANSI escape code translator")
121 (description "@code{ANSIColoredPrinters.jl} converts a text qualified by
122 ANSI escape codes to another format.")
123 (license license:expat)))
125 (define-public julia-aqua
133 (url "https://github.com/JuliaTesting/Aqua.jl")
134 (commit (string-append "v" version))))
135 (file-name (git-file-name name version))
137 (base32 "1g0kyzcdykgs247j72jpc2qqall696jwgb3hnn4cxmbi8bkf7wpk"))))
138 (build-system julia-build-system)
139 (home-page "https://github.com/JuliaTesting/Aqua.jl")
140 (synopsis "Automated quality assurance for Julia packages")
141 (description "@acronym{Aqua.jl, Auto QUality Assurance for Julia packages},
142 provides functions to run a few automatable checks for Julia packages.")
143 (license license:expat)))
145 (define-public julia-arrayinterface
147 (name "julia-arrayinterface")
153 (url "https://github.com/JuliaArrays/ArrayInterface.jl")
154 (commit (string-append "v" version))))
155 (file-name (git-file-name name version))
157 (base32 "0cmldnzvdgmfnrnrzgj6v1mfr2rvk5096392rwmhd3iyx7v0pq33"))))
158 (build-system julia-build-system)
160 `(("julia-ifelse" ,julia-ifelse)
161 ("julia-requires" ,julia-requires)
162 ("julia-static" ,julia-static)))
164 `(("julia-aqua" ,julia-aqua)
165 ("julia-bandedmatrices" ,julia-bandedmatrices)
166 ("julia-blockbandedmatrices" ,julia-blockbandedmatrices)
167 ("julia-ifelse" ,julia-ifelse)
168 ("julia-offsetarrays" ,julia-offsetarrays)
169 ("julia-staticarrays" ,julia-staticarrays)))
170 (home-page "https://github.com/JuliaArrays/ArrayInterface.jl")
171 (synopsis "Base array interface primitives")
172 (description "The purpose of this library is to solidify extensions to the
173 current @code{AbstractArray} interface, which are put to use in package
174 ecosystems like @code{DifferentialEquations.jl}. Since these libraries are
175 live, this package will serve as a staging ground for ideas before they are
176 merged into Base Julia. For this reason, no functionality is exported so that
177 if such functions are added and exported in a future Base Julia, there will be
178 no issues with the upgrade.")
179 (license license:expat)))
181 (define-public julia-arraylayouts
183 (name "julia-arraylayouts")
189 (url "https://github.com/JuliaMatrices/ArrayLayouts.jl")
190 (commit (string-append "v" version))))
191 (file-name (git-file-name name version))
193 (base32 "05q62pks8j23pgbrfny072rrwzrz6q19l68srnjxxv39ncmdmrvg"))))
194 (build-system julia-build-system)
196 `(("julia-fillarrays" ,julia-fillarrays)))
197 (home-page "https://github.com/JuliaMatrices/ArrayLayouts.jl")
198 (synopsis "Array layouts and general fast linear algebra")
199 (description "This package implements a trait-based framework for describing
200 array layouts such as column major, row major, etc. that can be dispatched to
201 appropriate BLAS or optimised Julia linear algebra routines. This supports a
202 much wider class of matrix types than Julia's in-built @code{StridedArray}.")
203 (license license:expat)))
205 (define-public julia-axisalgorithms
207 (name "julia-axisalgorithms")
213 (url "https://github.com/timholy/AxisAlgorithms.jl")
214 (commit (string-append "v" version))))
215 (file-name (git-file-name name version))
217 (base32 "00x85lnfln7xkfnirpplzyi8r6q92nfqwya8il156bf7b1pa20gk"))))
218 (build-system julia-build-system)
220 `(("julia-woodburymatrices" ,julia-woodburymatrices)))
221 (home-page "https://github.com/timholy/AxisAlgorithms.jl")
222 (synopsis "Filtering and linear algebra routines for multidimensional arrays")
223 (description "@code{AxisAlgorithms} is a collection of filtering and linear
224 algebra algorithms for multidimensional arrays. For algorithms that would
225 typically apply along the columns of a matrix, you can instead pick an arbitrary
227 (license license:expat)))
229 (define-public julia-axisarrays
231 (name "julia-axisarrays")
237 (url "https://github.com/JuliaArrays/AxisArrays.jl")
238 (commit (string-append "v" version))))
239 (file-name (git-file-name name version))
241 (base32 "03kzan1lm4fxfhzv1xjg3ysf6y7nagcc61vfz15kvdrp1dqxlynk"))))
242 (build-system julia-build-system)
244 `(("julia-rangearrays" ,julia-rangearrays)
245 ("julia-intervalsets" ,julia-intervalsets)
246 ("julia-itertools" ,julia-itertools)))
248 `(("julia-offsetarrays" ,julia-offsetarrays)
249 ("julia-unitful" ,julia-unitful)))
250 (home-page "http://juliaarrays.github.io/AxisArrays.jl/latest/")
251 (synopsis "Arrays where each dimension can have a named axis with values")
252 (description "This package for the Julia language provides an array type
253 (the AxisArray) that knows about its dimension names and axis values. This
254 allows for indexing by name without incurring any runtime overhead. This
255 permits one to implement algorithms that are oblivious to the storage order of
256 the underlying arrays. AxisArrays can also be indexed by the values along their
257 axes, allowing column names or interval selections.")
258 (license license:expat)))
260 (define-public julia-bandedmatrices
262 (name "julia-bandedmatrices")
268 (url "https://github.com/JuliaMatrices/BandedMatrices.jl")
269 (commit (string-append "v" version))))
270 (file-name (git-file-name name version))
272 (base32 "0rlfj9gr9ss621v5kw5b06206yaak21s2vq9vk7r8a7p2ylncism"))))
273 (build-system julia-build-system)
275 `(("julia-arraylayouts" ,julia-arraylayouts)
276 ("julia-fillarrays" ,julia-fillarrays)))
278 `(("julia-genericlinearalgebra" ,julia-genericlinearalgebra)))
279 (home-page "https://github.com/JuliaMatrices/BandedMatrices.jl")
280 (synopsis "Julia package for representing banded matrices")
281 (description "This package supports representing banded matrices by only
282 the entries on the bands.")
283 (license license:expat)))
285 (define-public julia-benchmarktools
287 (name "julia-benchmarktools")
293 (url "https://github.com/JuliaCI/BenchmarkTools.jl")
294 (commit (string-append "v" version))))
295 (file-name (git-file-name name version))
297 (base32 "1xz3kdrphp4b158pg7dwkiry49phs2fjjpdvk1hjpww5ykxacks8"))))
298 (build-system julia-build-system)
299 (propagated-inputs `(("julia-json" ,julia-json)))
300 (home-page "https://github.com/JuliaCI/BenchmarkTools.jl")
301 (synopsis "Benchmarking framework for the Julia language")
302 (description "@code{BenchmarkTools.jl} makes performance tracking of Julia
303 code easy by supplying a framework for writing and running groups of
304 benchmarks as well as comparing benchmark results.")
305 (license license:expat)))
307 (define-public julia-blockarrays
309 (name "julia-blockarrays")
315 (url "https://github.com/JuliaArrays/BlockArrays.jl")
316 (commit (string-append "v" version))))
317 (file-name (git-file-name name version))
319 (base32 "1by26036fk9mawmcgqxpwizgbs398v9p6vrbsgg7h6llqn3q9iw1"))))
320 (build-system julia-build-system)
322 `(("julia-arraylayouts" ,julia-arraylayouts)
323 ("julia-fillarrays" ,julia-fillarrays)))
325 `(("julia-lazyarrays" ,julia-lazyarrays)
326 ("julia-offsetarrays" ,julia-offsetarrays)
327 ("julia-staticarrays" ,julia-staticarrays)))
328 (home-page "https://github.com/JuliaArrays/BlockArrays.jl")
329 (synopsis "BlockArrays for Julia")
330 (description "A block array is a partition of an array into blocks or
331 subarrays. This package has two purposes. Firstly, it defines an interface for
332 an @code{AbstractBlockArray} block arrays that can be shared among types
333 representing different types of block arrays. The advantage to this is that it
334 provides a consistent API for block arrays.
335 Secondly, it also implements two different type of block arrays that follow the
336 @code{AbstractBlockArray} interface. The type @code{BlockArray} stores each
337 block contiguously while the type @code{PseudoBlockArray} stores the full matrix
338 contiguously. This means that @code{BlockArray} supports fast non copying
339 extraction and insertion of blocks while @code{PseudoBlockArray} supports fast
340 access to the full matrix to use in in for example a linear solver.")
341 (license license:expat)))
343 (define-public julia-blockbandedmatrices
345 (name "julia-blockbandedmatrices")
351 (url "https://github.com/JuliaMatrices/BlockBandedMatrices.jl")
352 (commit (string-append "v" version))))
353 (file-name (git-file-name name version))
355 (base32 "10n1r6kmmv2wa307jfg9y2m6p16j8hngjp3fjavpbdy1r5haasm9"))))
356 (build-system julia-build-system)
358 `(("julia-arraylayouts" ,julia-arraylayouts)
359 ("julia-bandedmatrices" ,julia-bandedmatrices)
360 ("julia-blockarrays" ,julia-blockarrays)
361 ("julia-fillarrays" ,julia-fillarrays)
362 ("julia-matrixfactorizations" ,julia-matrixfactorizations)))
363 (home-page "https://github.com/JuliaMatrices/BlockBandedMatrices.jl")
364 (synopsis "Block-banded matrices and banded-block-banded matrices")
365 (description "This package supports representing block-banded and
366 banded-block-banded matrices by only storing the entries in the non-zero bands.
367 A @code{BlockBandedMatrix} is a subtype of @code{BlockMatrix} of
368 @code{BlockArrays.jl} whose layout of non-zero blocks is banded.")
369 (license license:expat)))
371 (define-public julia-bson
379 (url "https://github.com/JuliaIO/BSON.jl")
380 (commit (string-append "v" version))))
381 (file-name (git-file-name name version))
383 (base32 "1l5608ma2ys7v2gpcqbiv9mwfc6yrlqkihrfx1pf7fgv5llhd4fn"))))
384 (build-system julia-build-system)
386 `(("julia-dataframes" ,julia-dataframes)))
387 (home-page "https://github.com/JuliaIO/BSON.jl")
388 (synopsis "Binary JSON serialisation format")
389 (description "@code{BSON.jl} is a Julia package for working with the Binary
390 JSON serialisation format. It can be used as a general store for Julia data
392 (license license:expat)))
394 (define-public julia-bufferedstreams
396 (name "julia-bufferedstreams")
402 (url "https://github.com/BioJulia/BufferedStreams.jl")
403 (commit (string-append "v" version))))
404 (file-name (git-file-name name version))
406 (base32 "0sf4sxbq55mg2pwxyxf0c839z1lk0yxg8nmb7617bfbvw31cp88z"))))
407 (build-system julia-build-system)
408 ;; The package is old and tests are using undefined functions. They also
410 ;; https://travis-ci.org/BioJulia/BufferedStreams.jl/jobs/491050182
413 #:julia-package-name "BufferedStreams"))
414 (propagated-inputs `(("julia-compat" ,julia-compat)))
415 (home-page "https://github.com/BioJulia/BufferedStreams.jl")
416 (synopsis "Fast composable IO streams")
417 (description "@code{BufferedStreams.jl} provides buffering for IO
418 operations. It can wrap any @code{IO} type automatically making incremental
419 reading and writing faster.")
420 (license license:expat)))
422 (define-public julia-calculus
424 (name "julia-calculus")
430 (url "https://github.com/JuliaMath/Calculus.jl")
431 (commit (string-append "v" version))))
432 (file-name (git-file-name name version))
434 (base32 "0xh0ak2ycsjw2h86ja24ch3kn2d18zx3frrds78aimwdnqb1gdc2"))))
435 (build-system julia-build-system)
436 (home-page "https://github.com/JuliaMath/Calculus.jl")
437 (synopsis "Common utilities for automatic differentiation")
438 (description "This package provides tools for working with the basic
439 calculus operations of differentiation and integration. The @code{Calculus}
440 package produces approximate derivatives by several forms of finite
441 differencing or produces exact derivative using symbolic differentiation. It
442 can also be used to compute definite integrals by different numerical
444 (license license:expat)))
446 (define-public julia-categoricalarrays
448 (name "julia-categoricalarrays")
454 (url "https://github.com/JuliaData/CategoricalArrays.jl")
455 (commit (string-append "v" version))))
456 (file-name (git-file-name name version))
458 (base32 "1bcfylxdaizgasnmlkjjkf4dgfvy2y9ycnphw2d0z6mm9vx3n04x"))))
459 (build-system julia-build-system)
461 `(("julia-pooledarrays" ,julia-pooledarrays)))
463 `(("julia-dataapi" ,julia-dataapi)
464 ("julia-json" ,julia-json)
465 ("julia-json3" ,julia-json3)
466 ("julia-missings" ,julia-missings)
467 ("julia-recipesbase" ,julia-recipesbase)
468 ("julia-structtypes" ,julia-structtypes)))
469 (home-page "https://github.com/JuliaData/CategoricalArrays.jl")
470 (synopsis "Arrays for working with categorical data")
471 (description "This package provides tools for working with categorical
472 variables, both with unordered (nominal variables) and ordered categories
473 (ordinal variables), optionally with missing values.")
474 (license license:expat)))
476 (define-public julia-chainrules
478 (name "julia-chainrules")
484 (url "https://github.com/JuliaDiff/ChainRules.jl")
485 (commit (string-append "v" version))))
486 (file-name (git-file-name name version))
488 (base32 "0if93pd3b3scg2x3gmk1cbwjk0ax1n792vy8c38y3xl7jpd5cb70"))))
489 (build-system julia-build-system)
490 (inputs ;required for test
491 `(("julia-chainrulestestutils" ,julia-chainrulestestutils)
492 ("julia-finitedifferences" ,julia-finitedifferences)
493 ("julia-nanmath" ,julia-nanmath)
494 ("julia-specialfunctions" ,julia-specialfunctions)))
496 `(("julia-chainrulescore" ,julia-chainrulescore)
497 ("julia-compat" ,julia-compat)
498 ("julia-reexport" ,julia-reexport)
499 ("julia-requires" ,julia-requires)))
500 (home-page "https://github.com/JuliaDiff/ChainRules.jl")
501 (synopsis "Common utilities for automatic differentiation")
502 (description "The is package provides a variety of common utilities that
503 can be used by downstream automatic differentiation (AD) tools to define and
504 execute forward-, reverse-, and mixed-mode primitives.")
505 (license license:expat)))
507 (define-public julia-chainrulescore
509 (name "julia-chainrulescore")
515 (url "https://github.com/JuliaDiff/ChainRulesCore.jl")
516 (commit (string-append "v" version))))
517 (file-name (git-file-name name version))
519 (base32 "1866xv30h1bi7f2m993nljzf58wwmv8zlgn6ffn9j3wckch1nfpb"))))
520 (build-system julia-build-system)
521 (inputs ;required for tests
522 `(("julia-benchmarktools" ,julia-benchmarktools)
523 ("julia-staticarrays" ,julia-staticarrays)))
525 `(("julia-compat" ,julia-compat)))
526 (home-page "https://github.com/JuliaDiff/ChainRulesCore.jl")
527 (synopsis "Common utilities used by downstream automatic differentiation tools")
528 (description "The package provides a light-weight dependency for defining
529 sensitivities for functions without the need to depend on ChainRules itself.")
530 (license license:expat)))
532 (define-public julia-chainrulestestutils
534 (name "julia-chainrulestestutils")
540 (url "https://github.com/JuliaDiff/ChainRulesTestUtils.jl")
541 (commit (string-append "v" version))))
542 (file-name (git-file-name name version))
544 (base32 "1vlkyp72d514gyb4k3yhjl1g7f24ncmz61j56p4sdi9f76rk9fx9"))))
545 (build-system julia-build-system)
547 `(("julia-chainrulescore" ,julia-chainrulescore)
548 ("julia-compat" ,julia-compat)
549 ("julia-finitedifference" ,julia-finitedifferences)))
550 (home-page "https://github.com/JuliaDiff/ChainRulesTestUtils.jl")
551 (synopsis "Common utilities used by downstream automatic differentiation tools")
552 (description "This package is designed to help in testing
553 @code{ChainRulesCore.frule} and @code{ChainRulesCore.rrule} methods. The main
554 entry points are @code{ChainRulesTestUtils.frule_test},
555 @code{ChainRulesTestUtils.rrule_test}, and
556 @code{ChainRulesTestUtils.test_scalar}. Currently this is done via testing the
557 rules against numerical differentiation (using @code{FiniteDifferences.jl}).
559 @code{ChainRulesTestUtils.jl} is separated from @code{ChainRulesCore.jl} so that it
560 can be a test-only dependency, allowing it to have potentially heavy
561 dependencies, while keeping @code{ChainRulesCore.jl} as light-weight as possible.")
562 (license license:expat)))
564 (define-public julia-colors
566 (name "julia-colors")
572 (url "https://github.com/JuliaGraphics/Colors.jl")
573 (commit (string-append "v" version))))
574 (file-name (git-file-name name version))
576 (base32 "0kx3hq7rf8p5zx6ly9k5j90zijmc7yrwmy96cgkl2ibdfbnhmya3"))))
577 (build-system julia-build-system)
579 `(("julia-colortypes" ,julia-colortypes)
580 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
581 ("julia-reexport" ,julia-reexport)))
582 (home-page "https://github.com/JuliaGraphics/Colors.jl")
583 (synopsis "Tools for dealing with color")
584 (description "This package provides a wide array of functions for dealing
585 with color. This includes conversion between colorspaces, measuring distance
586 between colors, simulating color blindness, parsing colors, and generating
587 color scales for graphics.")
588 (license license:expat)))
590 (define-public julia-colorschemes
592 (name "julia-colorschemes")
598 (url "https://github.com/JuliaGraphics/ColorSchemes.jl")
599 (commit (string-append "v" version))))
600 (file-name (git-file-name name version))
602 (base32 "0kpjhmqd5cj8dh8bmh9b5g6bscyp7h23hzpr2s93pnrp57q1wvhq"))))
603 (build-system julia-build-system)
605 `(("julia-colors" ,julia-colors)
606 ("julia-colortypes" ,julia-colortypes)
607 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
608 ("julia-staticarrays" ,julia-staticarrays)))
609 (home-page "https://github.com/JuliaGraphics/ColorSchemes.jl")
610 (synopsis "Colorschemes, colormaps, gradients, and palettes")
611 (description "This package provides a collection of colorschemes.")
612 (license license:expat)))
614 (define-public julia-colortypes
616 (name "julia-colortypes")
622 (url "https://github.com/JuliaGraphics/ColorTypes.jl")
623 (commit (string-append "v" version))))
624 (file-name (git-file-name name version))
626 (base32 "0n7h70caqv7yd0khjhn90iax62r73mcif8qzkwj5b4q46li1r8ih"))))
627 (build-system julia-build-system)
629 `(("julia-fixedpointnumbers" ,julia-fixedpointnumbers)))
631 `(("julia-documenter" ,julia-documenter)))
632 (home-page "https://github.com/JuliaGraphics/ColorTypes.jl")
633 (synopsis "Basic color types and constructor")
634 (description "This minimalistic package serves as the foundation for
635 working with colors in Julia. It defines basic color types and their
636 constructors, and sets up traits and show methods to make them easier to work
638 (license license:expat)))
640 (define-public julia-colorvectorspace
642 (name "julia-colorvectorspace")
648 (url "https://github.com/JuliaGraphics/ColorVectorSpace.jl")
649 (commit (string-append "v" version))))
650 (file-name (git-file-name name version))
652 (base32 "02gk7f5g5wjxdasbjf8bvv1m7clksh7mw1xmygjdirjz1q0d6dwi"))))
653 (build-system julia-build-system)
655 `(("julia-colortypes" ,julia-colortypes)
656 ("julia-specialfunctions" ,julia-specialfunctions)
657 ("julia-tensorcore" ,julia-tensorcore)))
659 `(("julia-colors" ,julia-colors)))
660 (home-page "https://github.com/JuliaGraphics/ColorVectorSpace.jl")
661 (synopsis "Treat colors as n-vectors for the purposes of arithmetic")
662 (description "This package is an add-on to @code{ColorTypes.jl} and provides
663 fast mathematical operations for objects with types such as RGB and Gray.
664 Specifically, with this package both grayscale and RGB colors are treated as if
665 they are points in a normed vector space.")
666 (license license:expat)))
668 (define-public julia-combinatorics
670 (name "julia-combinatorics")
676 (url "https://github.com/JuliaMath/Combinatorics.jl")
677 (commit (string-append "v" version))))
678 (file-name (git-file-name name version))
680 (base32 "0gafqkqi874zfm9h99akw9q95lk3ih5gip2h8p12fj9h7rvyf4j5"))))
681 (build-system julia-build-system)
682 (home-page "https://github.com/JuliaMath/Combinatorics.jl")
683 (synopsis "Combinatorics library for Julia")
684 (description "This package provides a combinatorics library for Julia,
685 focusing mostly (as of now) on enumerative combinatorics and permutations.")
686 (license license:expat)))
688 (define-public julia-commonsubexpressions
690 (name "julia-commonsubexpressions")
696 (url "https://github.com/rdeits/CommonSubexpressions.jl")
697 (commit (string-append "v" version))))
698 (file-name (git-file-name name version))
700 (base32 "0mgy90kk8ksv3l720kkk04gnhn4aqhh2dj4sp3x8yy3limngfjay"))))
701 (build-system julia-build-system)
703 `(("julia-macrotools" ,julia-macrotools)))
704 (home-page "https://github.com/rdeits/CommonSubexpressions.jl")
705 (synopsis "@code{@@cse} macro for Julia")
706 (description "This package provides the @code{@@cse} macro, which performs
707 common subexpression elimination.")
708 (license license:expat)))
710 (define-public julia-compat
712 (name "julia-compat")
718 (url "https://github.com/JuliaLang/Compat.jl")
719 (commit (string-append "v" version))))
720 (file-name (git-file-name name version))
722 (base32 "0qzvaqi5gqgc747fnajbvvf5vqbh6cwykwky00c7glvmvdsgk3z0"))))
723 (build-system julia-build-system)
724 (home-page "https://github.com/JuliaLang/Compat.jl")
725 (synopsis "Compatibility across Julia versions")
726 (description "The Compat package is designed to ease interoperability
727 between older and newer versions of the Julia language. The Compat package
728 provides a macro that lets you use the latest syntax in a backwards-compatible
730 (license license:expat)))
732 (define-public julia-configurations
734 (name "julia-configurations")
740 (url "https://github.com/Roger-luo/Configurations.jl")
741 (commit (string-append "v" version))))
742 (file-name (git-file-name name version))
744 (base32 "1b23p0zk8dx2sf01cnw177mqci7qd81b9s32ixz9clsh0r0icl1b"))))
745 (build-system julia-build-system)
748 (modify-phases %standard-phases
749 (add-after 'unpack 'fix-tests
751 (substitute* "test/runtests.jl"
752 (("option.toml") "test/option.toml"))
754 (add-after 'unpack 'dont-use-exproniconlite
756 (substitute* '("Project.toml"
757 "src/Configurations.jl"
759 (("ExproniconLite") "Expronicon"))
760 (substitute* "Project.toml"
761 (("55351af7-c7e9-48d6-89ff-24e801d99491")
762 "6b7a57c9-7cc1-4fdf-b7f5-e857abae3636"))
765 `(("julia-crayons" ,julia-crayons)
766 ("julia-expronicon" ,julia-expronicon)
767 ("julia-orderedcollections" ,julia-orderedcollections)))
768 (home-page "https://configurations.rogerluo.dev/stable/")
769 (synopsis "Tools for options and configurations in Julia")
770 (description "@code{Configurations.jl} provides a macro @code{@@option} to
771 let you define @code{structs} to represent options/configurations, and serialize
772 between different option/configuration file formats such as @code{TOML}.")
773 (license license:expat)))
775 (define-public julia-constructionbase
777 (name "julia-constructionbase")
783 (url "https://github.com/JuliaObjects/ConstructionBase.jl")
784 (commit (string-append "v" version))))
785 (file-name (git-file-name name version))
787 (base32 "1jk3h446vkv4yaavgm1hf1az7cwhppvhklvr08s49hhg02cm750q"))))
788 (build-system julia-build-system)
789 (home-page "https://juliaobjects.github.io/ConstructionBase.jl/dev/")
790 (synopsis "Primitive functions for construction of objects")
791 (description "This very lightweight package provides primitive functions
792 for construction of objects.")
793 (license license:expat)))
795 (define-public julia-coordinatetransformations
797 (name "julia-coordinatetransformations")
803 (url "https://github.com/JuliaGeometry/CoordinateTransformations.jl")
804 (commit (string-append "v" version))))
805 (file-name (git-file-name name version))
807 (base32 "15zbkn32v7xlz7559s0r5a0vkwmjwsswxaqpzijly4lky4jnp33d"))))
808 (build-system julia-build-system)
810 `(("julia-staticarrays" ,julia-staticarrays)))
812 `(("julia-documenter" ,julia-documenter)
813 ("julia-forwarddiff" ,julia-forwarddiff)
814 ("julia-unitful" ,julia-unitful)))
815 (home-page "https://github.com/JuliaGeometry/CoordinateTransformations.jl")
816 (synopsis "Coordinate transformations in Julia")
817 (description "@code{CoordinateTransformations} is a Julia package to manage
818 simple or complex networks of coordinate system transformations.
819 Transformations can be easily applied, inverted, composed, and differentiated
820 (both with respect to the input coordinates and with respect to transformation
821 parameters such as rotation angle). Transformations are designed to be
822 light-weight and efficient enough for, e.g., real-time graphical applications,
823 while support for both explicit and automatic differentiation makes it easy to
824 perform optimization and therefore ideal for computer vision applications such
825 as SLAM (simultaneous localization and mapping).")
826 (license license:expat)))
828 (define-public julia-crayons
830 (name "julia-crayons")
836 (url "https://github.com/KristofferC/Crayons.jl")
837 (commit (string-append "v" version))))
838 (file-name (git-file-name name version))
840 (base32 "0v3zhjlnb2914bxcj4myl8pgb7m31p77aj2k1bckmqs96jdph10z"))))
841 (build-system julia-build-system)
842 (home-page "https://github.com/KristofferC/Crayons.jl")
843 (synopsis "Colored and styled strings for terminals")
844 (description "Crayons is a package that makes it simple to write strings in
845 different colors and styles to terminals. It supports the 16 system colors,
846 both the 256 color and 24 bit true color extensions, and the different text
847 styles available to terminals.")
848 (license license:expat)))
850 (define-public julia-dataapi
852 (name "julia-dataapi")
858 (url "https://github.com/JuliaData/DataAPI.jl")
859 (commit (string-append "v" version))))
860 (file-name (git-file-name name version))
862 (base32 "0swk31p83fycz5cdj4fg6b0wfqj473lnx94q2fl7ybxkkc6afba7"))))
863 (build-system julia-build-system)
864 (home-page "https://github.com/JuliaData/DataAPI.jl")
865 (synopsis "Data-focused namespace for packages to share functions")
866 (description "This package provides a namespace for data-related generic
867 function definitions to solve the optional dependency problem; packages wishing
868 to share and/or extend functions can avoid depending directly on each other by
869 moving the function definition to DataAPI.jl and each package taking a
871 (license license:expat)))
873 (define-public julia-dataframes
875 (name "julia-dataframes")
881 (url "https://github.com/JuliaData/DataFrames.jl")
882 (commit (string-append "v" version))))
883 (file-name (git-file-name name version))
885 (base32 "1bk0amrghgjrkyn1mm4ac23swwbgszl1d0qyl9137qj5zvv9dasp"))))
886 (build-system julia-build-system)
889 (modify-phases %standard-phases
890 (add-after 'unpack 'skip-failing-test
892 ;; Tests with non-standard colors.
893 (substitute* "test/show.jl"
894 (("test (sprint\\(show, df, context=:color=>true)" _ test)
895 (string-append "test_nowarn " test)))
896 (substitute* "test/io.jl"
897 (("testset \\\"improved.*" all)
898 (string-append all "return\n")))
899 (substitute* "test/join.jl"
900 (("test (levels\\(outerjoin\\(B)" _ test)
901 (string-append "test_nowarn " test)))
904 `(("julia-dataapi" ,julia-dataapi)
905 ("julia-invertedindices" ,julia-invertedindices)
906 ("julia-iteratorinterfaceextensions" ,julia-iteratorinterfaceextensions)
907 ("julia-missings" ,julia-missings)
908 ("julia-pooledarrays" ,julia-pooledarrays)
909 ("julia-prettytables" ,julia-prettytables)
910 ("julia-reexport" ,julia-reexport)
911 ("julia-sortingalgorithms" ,julia-sortingalgorithms)
912 ("julia-tables" ,julia-tables)
913 ("julia-tabletraits" ,julia-tabletraits)))
915 `(("julia-categoricalarrays" ,julia-categoricalarrays)
916 ("julia-combinatorics" ,julia-combinatorics)
917 ("julia-datastructures" ,julia-datastructures)
918 ("julia-datavalues" ,julia-datavalues)
919 ("julia-offsetarrays" ,julia-offsetarrays)
920 ("julia-unitful" ,julia-unitful)))
921 (home-page "https://dataframes.juliadata.org/stable/")
922 (synopsis "In-memory tabular data")
923 (description "This package provides a set of tools for working with tabular
924 data in Julia. Its design and functionality are similar to those of Pandas from
925 Python or @code{data.frame}, @code{data.table} and @code{dplyr} from R, making
926 it a great general purpose data science tool, especially for those coming to
927 Julia from R or Python.")
928 (license license:expat)))
930 (define-public julia-datastructures
932 (name "julia-datastructures")
938 (url "https://github.com/JuliaCollections/DataStructures.jl")
939 (commit (string-append "v" version))))
940 (file-name (git-file-name name version))
942 (base32 "0hdqp8ipsqdw5bqqkdvz4j6n67x80sj5azr9vzyxwjfsgkfbnk2l"))))
944 `(("julia-compat" ,julia-compat)
945 ("julia-orderedcollections" ,julia-orderedcollections)))
946 (build-system julia-build-system)
947 (home-page "https://github.com/JuliaCollections/DataStructures.jl")
948 (synopsis "Julia module providing different data structures")
949 (description "This package implements a variety of data structures,
950 including, @code{CircularBuffer}, @code{Queue}, @code{Stack},
951 @code{Accumulators}, @code{LinkedLists}, @code{SortedDicts} and many others.")
952 (license license:expat)))
954 (define-public julia-datavalueinterfaces
956 (name "julia-datavalueinterfaces")
962 (url "https://github.com/queryverse/DataValueInterfaces.jl")
963 (commit (string-append "v" version))))
964 (file-name (git-file-name name version))
966 (base32 "0g2wj6q7jj956nx6g7dk8x7w1c4l2xcmnr1kq5x8s8fild9kslg8"))))
967 (build-system julia-build-system)
968 (home-page "https://github.com/queryverse/DataValueInterfaces.jl")
969 (synopsis "Interface for DataValues.jl")
970 (description "This package allows a few \"forward\" definitions for the
971 @code{DataValues.jl} package that other packages can utilize for integration
972 without having to take direct dependencies.")
973 (license license:expat)))
975 (define-public julia-datavalues
977 (name "julia-datavalues")
983 (url "https://github.com/queryverse/DataValues.jl")
984 (commit (string-append "v" version))))
985 (file-name (git-file-name name version))
987 (base32 "15j3hrqq6nazn533bfsvg32xznacbzsl303j1qs48av59ppnvhhv"))))
988 (build-system julia-build-system)
990 `(#:tests? #f ; Tests need upgrading with newer Julia version.
992 (modify-phases %standard-phases
993 (add-after 'unpack 'skip-known-failing-tests
995 ;; See upstream report:
996 ;; https://github.com/queryverse/DataValues.jl/issues/83
997 (substitute* "test/array/test_reduce.jl"
998 ((".*DataValue\\(mapreduce.*") "")
999 ((".*DataValue\\(method\\(f.*") ""))
1002 `(("julia-datavalueinterfaces" ,julia-datavalueinterfaces)))
1003 (home-page "https://github.com/queryverse/DataValues.jl")
1004 (synopsis "Missing values for Julia")
1005 (description "This package provides the type @code{DataValue} that is used
1006 to represent missing data.")
1007 (license license:expat)))
1009 (define-public julia-deepdiffs
1011 (name "julia-deepdiffs")
1017 (url "https://github.com/ssfrr/DeepDiffs.jl")
1018 (commit (string-append "v" version))))
1019 (file-name (git-file-name name version))
1021 (base32 "1gsbxb1d67g05h5bvzz3swdfih6404jrydy724a8dvbdgqvm3sds"))))
1022 (build-system julia-build-system)
1023 (home-page "https://github.com/ssfrr/DeepDiffs.jl")
1024 (synopsis "Compute and pretty-print diffs for data structures")
1025 (description "@code{DeepDiffs.jl} provides the @code{deepdiff} function,
1026 which finds and displays differences (diffs) between Julia data structures. It
1027 supports @code{Vectors}, @code{Dicts}, and @code{String}s. When diffing
1028 dictionaries where values associated with a particular key may change,
1029 @code{deepdiff} will recurse into value to provide a more detailed diff.")
1030 (license license:expat)))
1032 (define-public julia-dictionaries
1034 (name "julia-dictionaries")
1040 (url "https://github.com/andyferris/Dictionaries.jl")
1041 (commit (string-append "v" version))))
1042 (file-name (git-file-name name version))
1044 (base32 "1mm43hm8hd6sgmkkpqhbqhvap7mpkjwzmz5algxi6manp580gkr5"))))
1045 (build-system julia-build-system)
1047 `(("julia-indexing" ,julia-indexing)))
1048 (home-page "https://github.com/andyferris/Dictionaries.jl")
1049 (synopsis "Alternative interface for dictionaries in Julia")
1050 (description "This package provides an alternative interface for
1051 dictionaries in Julia, for improved productivity and performance.")
1052 (license license:expat)))
1054 (define-public julia-distances
1056 (name "julia-distances")
1062 (url "https://github.com/JuliaStats/Distances.jl")
1063 (commit (string-append "v" version))))
1064 (file-name (git-file-name name version))
1066 (base32 "1yqd9wg4z15k42mrp4y14j2x0sq7yrjhm5zpqklrw6w6j1c367ig"))))
1067 (build-system julia-build-system)
1070 (modify-phases %standard-phases
1071 (add-after 'unpack 'skip-flakey-tests
1073 ;; Some combination of these tests fail nondeterministically
1074 ;; each of the times this package is built.
1075 (substitute* "test/test_dists.jl"
1076 (("test dyz ≥") "test_nowarn dyz ≥")
1077 (("test dist\\(y, x") "test_nowarn dist(y, x")
1078 (("test dist\\(z, x") "test_nowarn dist(z, x")
1079 (("test dist\\(z, y") "test_nowarn dist(z, y")))))))
1081 `(("julia-statsapi" ,julia-statsapi)))
1083 `(("julia-offsetarrays" ,julia-offsetarrays)
1084 ("julia-unitful" ,julia-unitful)))
1085 (home-page "https://github.com/JuliaStats/Distances.jl")
1086 (synopsis "Julia package for evaluating distances (metrics) between vectors")
1087 (description "A Julia package for evaluating distances(metrics) between
1088 vectors. This package also provides optimized functions to compute column-wise
1089 and pairwise distances, which are often substantially faster than a
1090 straightforward loop implementation.")
1091 (license license:expat)))
1093 (define-public julia-docstringextensions
1095 (name "julia-docstringextensions")
1101 (url "https://github.com/JuliaDocs/DocStringExtensions.jl")
1102 (commit (string-append "v" version))))
1103 (file-name (git-file-name name version))
1105 (base32 "0fy4kfnfacyfmlly6nqxn77dk2gqw80b69zb4m1i0i39zv3cpqfb"))))
1106 (build-system julia-build-system)
1108 `(#:tests? #f)) ; Tests try to read SSL certificates.
1109 (home-page "https://juliadocs.github.io/DocStringExtensions.jl/latest/")
1110 (synopsis "Extensions for Julia's docsystem")
1111 (description "This package provides a collection of useful extensions for
1112 Julia's built-in docsystem. These are features that are not yet mature enough
1113 to be considered for inclusion in Base, or that have sufficiently niche use
1114 cases that including them with the default Julia installation is not seen as
1115 valuable enough at this time.")
1116 (license license:expat)))
1118 ;; By removing all the javascript and css downloads any HTML documentation
1119 ;; produced by this package will not be very useful.
1120 (define-public julia-documenter
1122 (name "julia-documenter")
1128 (url "https://github.com/JuliaDocs/Documenter.jl")
1129 (commit (string-append "v" version))))
1130 (file-name (git-file-name name version))
1132 (base32 "00ai3c24i3fkn5plmavampcxm0ijhwk0v5cn9xwm7rvbjnnvaaam"))))
1133 (build-system julia-build-system)
1136 (modify-phases %standard-phases
1137 (add-after 'unpack 'patch-source
1138 (lambda* (#:key inputs #:allow-other-keys)
1139 (substitute* "src/Deps.jl"
1141 (string-append (assoc-ref inputs "python")
1142 "/bin/pip install")))
1144 (add-after 'unpack 'remove-javascript-downloads
1146 (substitute* "src/Writers/HTMLWriter.jl"
1147 (("cdnjs.cloudflare.com") "example.com"))
1148 ;; Removing the javascript downloads causes these tests fail.
1149 (substitute* "test/examples/tests.jl"
1150 ((".*Main\\.examples_html_doc.*") "")
1151 ((".*Main\\.examples_html_mathjax3_doc.*") ""))
1154 `(("julia-ansicoloredprinters" ,julia-ansicoloredprinters)
1155 ("julia-docstringextensions" ,julia-docstringextensions)
1156 ("julia-iocapture" ,julia-iocapture)
1157 ("julia-json" ,julia-json)))
1159 `(("python" ,python-wrapper)))
1161 `(("git" ,git-minimal)
1162 ("julia-documentermarkdown" ,julia-documentermarkdown)
1163 ("julia-documentertools" ,julia-documentertools)))
1164 (home-page "https://juliadocs.github.io/Documenter.jl")
1165 (synopsis "Documentation generator for Julia")
1166 (description "This package provides a documentation generator for Julia.")
1167 (license license:expat)))
1169 (define julia-documenter-bootstrap
1171 (inherit julia-documenter)
1172 (name "julia-documenter-bootstrap")
1174 (substitute-keyword-arguments (package-arguments julia-documenter)
1176 `(modify-phases ,phases
1177 (delete 'patch-source)))
1178 ;; Not all dependencies available in bootstrap version.
1179 ((#:tests? _ #f) #f)))
1181 (native-inputs `())))
1183 (define-public julia-documentermarkdown
1185 (name "julia-documentermarkdown")
1191 (url "https://github.com/JuliaDocs/DocumenterMarkdown.jl")
1192 (commit (string-append "v" version))))
1193 (file-name (git-file-name name version))
1195 (base32 "0sx89hi5p2f8zi2rp5qrv06m270d90pxj5d2y5cxls1spax7wqx8"))))
1196 (build-system julia-build-system)
1198 ;; We don't want to propagate the bootstrap version.
1199 ;; Cycle with Documenter.jl in later versions.
1200 `(("julia-documenter" ,julia-documenter-bootstrap)))
1201 (home-page "https://github.com/JuliaDocs/DocumenterMarkdown.jl")
1202 (synopsis "Documenter's Markdown")
1203 (description "This package enables the Markdown / MkDocs backend of
1204 @code{Documenter.jl}.")
1205 (license license:expat)))
1207 (define-public julia-documentertools
1209 (name "julia-documentertools")
1215 (url "https://github.com/JuliaDocs/DocumenterTools.jl")
1216 (commit (string-append "v" version))))
1217 (file-name (git-file-name name version))
1219 (base32 "05p57p8xlkn42m1lv9gq4hl96vp7hpj19d51p828ai1rbpcpi3a6"))))
1220 (build-system julia-build-system)
1222 `(#:tests? #f)) ; Tests require network.
1224 ;; We don't want to propagate the bootstrap version.
1225 ;; Cycle with Documenter.jl in later versions.
1226 `(("julia-documenter" ,julia-documenter-bootstrap)))
1228 `(("julia-docstringextensions" ,julia-docstringextensions)
1229 ("julia-gumbo" ,julia-gumbo)
1230 ("julia-sass" ,julia-sass)))
1232 `(("julia-example" ,julia-example)))
1233 (home-page "https://github.com/JuliaDocs/DocumenterTools.jl")
1234 (synopsis "Extra tools for setting up Documenter.jl")
1235 (description "This package contains utilities for setting up documentation
1236 generation with @code{Documenter.jl}.")
1237 (license license:expat)))
1239 (define-public julia-diffresults
1241 (name "julia-diffresults")
1247 (url "https://github.com/JuliaDiff/DiffResults.jl")
1248 (commit (string-append "v" version))))
1249 (file-name (git-file-name name version))
1251 (base32 "1w6p3yxajvclax5b9g7cr2jmbc7lvr5nk4gq0aljxdycdq1d2y3v"))))
1253 `(("julia-staticarrays" ,julia-staticarrays)))
1254 (build-system julia-build-system)
1255 (home-page "https://github.com/JuliaDiff/DiffResults.jl")
1256 (synopsis "In-place differentiation methods of primal values at multi-order")
1257 (description "This package provides the @code{DiffResult} type, which can
1258 be passed to in-place differentiation methods instead of an output buffer.")
1259 (license license:expat)))
1261 (define-public julia-diffrules
1263 (name "julia-diffrules")
1269 (url "https://github.com/JuliaDiff/DiffRules.jl")
1270 (commit (string-append "v" version))))
1271 (file-name (git-file-name name version))
1273 (base32 "0cwjvj4gma7924fm3yas0nf0jlnwwx4v7fi79ii3s290lkdldzfl"))))
1275 `(("julia-nanmath" ,julia-nanmath)
1276 ("julia-specialfunctions" ,julia-specialfunctions)))
1277 (build-system julia-build-system)
1278 (home-page "https://github.com/JuliaDiff/DiffRules.jl")
1279 (synopsis "Primitive differentiation rules")
1280 (description "This package provides primitive differentiation rules that
1281 can be composed via various formulations of the chain rule. Using
1282 @code{DiffRules}, new differentiation rules can defined, query whether or not
1283 a given rule exists, and symbolically apply rules to simple Julia expressions.")
1284 (license license:expat)))
1286 (define-public julia-difftests
1288 (name "julia-difftests")
1294 (url "https://github.com/JuliaDiff/DiffTests.jl")
1295 (commit (string-append "v" version))))
1296 (file-name (git-file-name name version))
1298 (base32 "1rxpnd5zi3pxgdd38l5jm2sxc3q6p7g57fqgll2dsiin07y3my57"))))
1299 (build-system julia-build-system)
1300 (home-page "https://github.com/JuliaDiff/DiffTests.jl")
1301 (synopsis "Common test functions for differentiation tools")
1302 (description "This package contains a common suite of test functions for
1303 stressing the robustness of differentiation tools.")
1304 (license license:expat)))
1306 (define-public julia-dualnumbers
1308 (name "julia-dualnumbers")
1314 (url "https://github.com/JuliaDiff/DualNumbers.jl")
1315 (commit (string-append "v" version))))
1316 (file-name (git-file-name name version))
1318 (base32 "05vr5wbzqpchnb96b3pmn67x196mbfnkv7r9bdlz3gm56if4awk5"))))
1319 (build-system julia-build-system)
1322 (modify-phases %standard-phases
1323 (add-after 'unpack 'adjust-test-suite
1325 (substitute* "test/runtests.jl"
1326 ;; Seems to not play nicely with SpecialFunctions
1327 ((".*isempty.*") "")))))))
1329 `(("julia-calculus" ,julia-calculus)
1330 ("julia-nanmath" ,julia-nanmath)
1331 ("julia-specialfunctions" ,julia-specialfunctions)))
1332 (home-page "https://github.com/JuliaDiff/DualNumbers.jl")
1333 (synopsis "Represent dual numbers and for perform dual algebra")
1334 (description "The @code{DualNumbers} Julia package defines the @code{Dual}
1335 type to represent dual numbers, and supports standard mathematical operations on
1336 them. Conversions and promotions are defined to allow performing operations on
1337 combinations of dual numbers with predefined Julia numeric types.")
1338 (license license:expat)))
1340 (define-public julia-ellipsisnotation
1342 (name "julia-ellipsisnotation")
1348 (url "https://github.com/ChrisRackauckas/EllipsisNotation.jl")
1349 (commit (string-append "v" version))))
1350 (file-name (git-file-name name version))
1352 (base32 "0py46kxl702r8pw3v7x4cqllf7yc91b0dr7vb60xh2qi7d6y3jc7"))))
1353 (build-system julia-build-system)
1356 (modify-phases %standard-phases
1357 (add-after 'unpack 'adjust-test-suite
1359 (substitute* "test/runtests.jl"
1360 ;; Seems to not play nicely with Julia-1.6.
1361 ((".*basic.jl.*") "")))))))
1363 `(("julia-arrayinterface" ,julia-arrayinterface)))
1364 (home-page "https://github.com/ChrisRackauckas/EllipsisNotation.jl")
1365 (synopsis "Elipsis notation implementation")
1366 (description "This implements the notation @code{..} for indexing arrays.
1367 It's similar to the Python @code{...} in that it means \"all of the columns
1368 before (or after)\".")
1369 (license license:expat)))
1371 (define-public julia-example
1372 (let ((commit "f968c69dea24f851d0c7e686db23fa55826b5388"))
1374 (name "julia-example")
1375 (version "0.5.4") ;tag not created upstream
1380 (url "https://github.com/JuliaLang/Example.jl")
1382 (file-name (git-file-name name version))
1384 (base32 "1v3z0d6gh6wfbypffy9m9rhh36px6fm5wjzq0y6rbmc95r0qpqlx"))))
1385 (build-system julia-build-system)
1386 (home-page "https://github.com/JuliaLang/Example.jl")
1387 (synopsis "Module providing examples")
1388 (description "This package provides various examples.")
1389 (license license:expat))))
1391 ;; ExproniconLite.jl is autogenerated from this package.
1392 (define-public julia-expronicon
1394 (name "julia-expronicon")
1400 (url "https://github.com/Roger-luo/Expronicon.jl")
1401 (commit (string-append "v" version))))
1402 (file-name (git-file-name name version))
1404 (base32 "0h8aaynqlxrkn8575k5vqmhzil4vvxchhf0bcxa6zwawp558gj2y"))))
1405 (build-system julia-build-system)
1408 (modify-phases %standard-phases
1409 (add-after 'unpack 'skip-network-tests
1411 (substitute* "test/runtests.jl"
1412 ;; This test tries to access the Julia package registry.
1413 ((".*expand\\.jl.*") "")))))))
1415 `(("julia-mlstyle" ,julia-mlstyle)))
1417 `(("julia-documenter" ,julia-documenter)))
1418 (home-page "https://expronicon.rogerluo.dev/dev/")
1419 (synopsis "Collective tools for metaprogramming on Julia Expr")
1420 (description "This package provides a collection of tools for
1421 metaprogramming on Julia Expr, the meta programming standard library for
1423 (license license:expat)))
1425 (define-public julia-exprtools
1427 (name "julia-exprtools")
1433 (url "https://github.com/invenia/ExprTools.jl")
1434 (commit (string-append "v" version))))
1435 (file-name (git-file-name name version))
1437 (base32 "058ax5d96jpym5w3g37ah1c4xq3fskwpjdhchakzax15vqzy7ab4"))))
1438 (build-system julia-build-system)
1439 (home-page "https://github.com/invenia/ExprTools.jl")
1440 (synopsis "Light-weight expression manipulation tools")
1441 (description "@code{ExprTools} provides tooling for working with Julia
1442 expressions during metaprogramming. This package aims to provide light-weight
1443 performant tooling without requiring additional package dependencies.")
1444 (license license:expat)))
1446 (define-public julia-ffmpeg
1448 (name "julia-ffmpeg")
1454 (url "https://github.com/JuliaIO/FFMPEG.jl")
1455 (commit (string-append "v" version))))
1456 (file-name (git-file-name name version))
1458 (base32 "1ldxbp0kq3ip67x7sp82dz56aq4p5i0chspbgx2zgskr6jcbjj1b"))))
1459 (build-system julia-build-system)
1461 `(("julia-ffmpeg-jll" ,julia-ffmpeg-jll)
1462 ("julia-x264-jll" ,julia-x264-jll)))
1463 (home-page "https://github.com/JuliaIO/FFMPEG.jl")
1464 (synopsis "Julia Package for ffmpeg")
1465 (description "This package is made to be included into packages that just
1466 need the ffmpeg binaries + executables, and don't want the overhead of
1467 @code{VideoIO.jl}.")
1468 (license license:expat)))
1470 (define-public julia-fileio
1472 (name "julia-fileio")
1478 (url "https://github.com/JuliaIO/FileIO.jl")
1479 (commit (string-append "v" version))))
1480 (file-name (git-file-name name version))
1482 (base32 "1b18x43i737g5q41n9818xbnc2pgd98q1m6yw3h29yri0clg4gfx"))))
1483 (build-system julia-build-system)
1486 (modify-phases %standard-phases
1487 (delete 'reset-gzip-timestamps)
1488 (add-after 'unpack 'skip-network-tests
1490 ;; These tests try to download audio/video files.
1491 (substitute* "test/query.jl"
1492 (("testset.*(MP4|OGG|MATROSKA).*" all)
1493 (string-append all "return\n")))
1494 (substitute* "test/loadsave.jl"
1495 (("testset.*CSVFiles.*" all)
1496 (string-append all "return\n")))
1497 ;; This test tries to download a Julia package.
1498 (substitute* "test/error_handling.jl"
1499 (("testset.*Not installed.*" all)
1500 (string-append all "return\n")))
1501 ;; This test tries to write to the store.
1502 ;; (Error says can't find User 0)
1503 (substitute* "test/runtests.jl"
1504 ((".*test_mimesave.*") "")))))))
1506 `(("julia-requires" ,julia-requires)))
1508 `(("julia-colortypes" ,julia-colortypes)
1509 ("julia-filepathsbase" ,julia-filepathsbase)
1510 ("julia-http" ,julia-http)))
1511 (home-page "https://github.com/JuliaIO/FileIO.jl")
1512 (synopsis "Main Package for IO, loading all different kind of files")
1513 (description "@code{FileIO} aims to provide a common framework for detecting
1514 file formats and dispatching to appropriate readers/writers. The two core
1515 functions in this package are called @code{load} and @code{save}, and offer
1516 high-level support for formatted files (in contrast with Julia's low-level
1517 @code{read} and @code{write}).")
1518 (license license:expat)))
1520 (define-public julia-filepathsbase
1522 (name "julia-filepathsbase")
1528 (url "https://github.com/rofinn/FilePathsBase.jl")
1529 (commit (string-append "v" version))))
1530 (file-name (git-file-name name version))
1532 (base32 "136wm4ik6isrdanmpi4gdr1qw0qhr15i925qzjxbawk5hnyzwng9"))))
1533 (build-system julia-build-system)
1535 `(#:tests? #f)) ; Cycle with JLSO.jl
1536 (home-page "https://github.com/rofinn/FilePathsBase.jl")
1537 (synopsis "Filesystem path types in Julia")
1538 (description "@code{FilePathsBase.jl} provides a type based approach to
1539 working with filesystem paths in Julia.")
1540 (license license:expat)))
1542 (define-public julia-fillarrays
1544 (name "julia-fillarrays")
1550 (url "https://github.com/JuliaArrays/FillArrays.jl")
1551 (commit (string-append "v" version))))
1552 (file-name (git-file-name name version))
1554 (base32 "1sx96pzrgyh8k7x2w8vmyi6cazlmp7rg1n7wbl47qfzqjggka6kz"))))
1555 (build-system julia-build-system)
1556 (inputs ;required by tests
1557 `(("julia-staticarrays" ,julia-staticarrays)))
1558 (home-page "https://github.com/JuliaArrays/FillArrays.jl")
1559 (synopsis "Lazy matrix representation")
1560 (description "This package lazily represents matrices filled with
1561 a single entry, as well as identity matrices. This package exports the
1562 following types: @code{Eye}, @code{Fill}, @code{Ones}, @code{Zeros},
1563 @code{Trues} and @code{Falses}.")
1564 (license license:expat)))
1566 (define-public julia-finitediff
1568 (name "julia-finitediff")
1574 (url "https://github.com/JuliaDiff/FiniteDiff.jl")
1575 (commit (string-append "v" version))))
1576 (file-name (git-file-name name version))
1578 (base32 "105f6r0hq97n9mxf1nacmz94dpca66vzqj5p3zh4h0brshmggqnq"))))
1579 (build-system julia-build-system)
1582 (modify-phases %standard-phases
1583 (add-before 'check 'pre-check
1585 ;; We don't want to run all the tests; the Downstream tests
1586 ;; try to download the package registry.
1587 (setenv "GROUP" "Core")
1590 `(("julia-arrayinterface" ,julia-arrayinterface)
1591 ("julia-requires" ,julia-requires)
1592 ("julia-staticarrays" ,julia-staticarrays)))
1594 `(("julia-bandedmatrices" ,julia-bandedmatrices)
1595 ("julia-blockbandedmatrices" ,julia-blockbandedmatrices)
1596 ("julia-safetestsets" ,julia-safetestsets)))
1597 (home-page "https://github.com/JuliaDiff/FiniteDiff.jl")
1598 (synopsis "Calculations of gradients, Jacobians, and Hessians")
1599 (description "This package is for calculating derivatives, gradients,
1600 Jacobians, Hessians, etc. numerically. This library is for maximizing speed
1601 while giving a usable interface to end users in a way that specializes on array
1602 types and sparsity.")
1603 (license license:expat)))
1605 (define-public julia-finitedifferences
1607 (name "julia-finitedifferences")
1613 (url "https://github.com/JuliaDiff/FiniteDifferences.jl")
1614 (commit (string-append "v" version))))
1615 (file-name (git-file-name name version))
1617 (base32 "09nsf9cgk49yrvprflnhd9h5rrgs280rgj8sad3csghxdx6jqk5c"))))
1618 (build-system julia-build-system)
1620 `(("julia-benchmarktools" ,julia-benchmarktools)))
1622 `(("julia-chainrulescore" ,julia-chainrulescore)
1623 ("julia-richardson" ,julia-richardson)
1624 ("julia-staticarrays" ,julia-staticarrays)))
1625 (home-page "https://github.com/JuliaDiff/FiniteDifferences.jl")
1626 (synopsis "Estimates derivatives with finite differences")
1627 (description "This package calculates approximate derivatives numerically
1628 using finite difference.")
1629 (license license:expat)))
1631 (define-public julia-fixedpointnumbers
1633 (name "julia-fixedpointnumbers")
1639 (url "https://github.com/JuliaMath/FixedPointNumbers.jl")
1640 (commit (string-append "v" version))))
1641 (file-name (git-file-name name version))
1643 (base32 "0j0n40n04q9sk68wh9jq90m6c67k4ws02k41djjzkrqmpzv4rcdi"))))
1644 (build-system julia-build-system)
1647 (modify-phases %standard-phases
1648 (add-after 'unpack 'disable-failing-test
1649 (lambda* (#:key outputs #:allow-other-keys)
1650 (substitute* "test/fixed.jl"
1651 ;; A deprecation warning is not thrown
1652 (("@test_logs.*:warn" all) (string-append "# " all)))
1654 (propagated-inputs `(("julia-compat" ,julia-compat)))
1655 (home-page "https://github.com/JuliaMath/FixedPointNumbers.jl")
1656 (synopsis "Fixed point types for Julia")
1657 (description "@code{FixedPointNumbers.jl} implements fixed-point number
1658 types for Julia. A fixed-point number represents a fractional, or
1659 non-integral, number. In contrast with the more widely known floating-point
1660 numbers, with fixed-point numbers the decimal point doesn't \"float\":
1661 fixed-point numbers are effectively integers that are interpreted as being
1662 scaled by a constant factor. Consequently, they have a fixed number of
1663 digits (bits) after the decimal (radix) point.")
1664 (license license:expat)))
1666 (define-public julia-formatting
1668 (name "julia-formatting")
1674 (url "https://github.com/JuliaIO/Formatting.jl")
1675 (commit (string-append "v" version))))
1676 (file-name (git-file-name name version))
1678 (base32 "0ma3q9my51rr38bb5712xkc4h3rq0wsfjb4ac6mdh9ywn8rqvrmh"))))
1679 (build-system julia-build-system)
1680 (home-page "https://github.com/JuliaIO/Formatting.jl")
1681 (synopsis "Julia package to provide Python-like formatting support")
1682 (description "This package offers Python-style general formatting and
1683 c-style numerical formatting.")
1684 (license license:expat)))
1686 (define-public julia-forwarddiff
1688 (name "julia-forwarddiff")
1694 (url "https://github.com/JuliaDiff/ForwardDiff.jl")
1695 (commit (string-append "v" version))))
1696 (file-name (git-file-name name version))
1698 (base32 "1vb46x8mcn61g1l14qrk22c043khg2ml4q1ci7h4k2v34f2ak5fs"))))
1699 (build-system julia-build-system)
1700 (inputs ;required for tests
1701 `(("julia-calculus" ,julia-calculus)
1702 ("julia-difftests" ,julia-difftests)))
1704 `(("julia-commonsubexpressions" ,julia-commonsubexpressions)
1705 ("julia-diffresults" ,julia-diffresults)
1706 ("julia-diffrules" ,julia-diffrules)
1707 ("julia-nanmath" ,julia-nanmath)
1708 ("julia-specialfunctions" ,julia-specialfunctions)
1709 ("julia-staticarrays" ,julia-staticarrays)))
1710 (home-page "https://github.com/JuliaDiff/ForwardDiff.jl")
1711 (synopsis "Methods to take multidimensional derivatives")
1712 (description "This package implements methods to take derivatives,
1713 gradients, Jacobians, Hessians, and higher-order derivatives of native Julia
1714 functions (or any callable object, really) using forward mode automatic
1715 differentiation (AD).")
1716 (license license:expat)))
1718 (define-public julia-functionwrappers
1720 (name "julia-functionwrappers")
1726 (url "https://github.com/yuyichao/FunctionWrappers.jl")
1727 (commit (string-append "v" version))))
1728 (file-name (git-file-name name version))
1730 (base32 "02jilpjr7px6138dx2w7ixricvfgsxqdk84d9dgviranibhnjcxa"))))
1731 (build-system julia-build-system)
1734 (modify-phases %standard-phases
1735 (add-after 'unpack 'adjust-tests
1737 (substitute* "test/runtests.jl"
1738 (("testset \\\"Abstract.*" all)
1739 (string-append all "return\n"))))))))
1740 (home-page "https://github.com/yuyichao/FunctionWrappers.jl")
1741 (synopsis "Type stable and efficient wrapper of arbitrary functions")
1742 (description "This package provides a type stable and efficient wrapper of
1743 arbitrary functions.")
1744 (license license:expat)))
1746 (define-public julia-functors
1748 (name "julia-functors")
1754 (url "https://github.com/FluxML/Functors.jl")
1755 (commit (string-append "v" version))))
1756 (file-name (git-file-name name version))
1758 (base32 "03ry1wn1y2jssq65l29bi6q4ki041aa6gl1nd2w6cgl00k2mrxf3"))))
1759 (build-system julia-build-system)
1760 (home-page "https://fluxml.ai/Functors.jl/stable/")
1761 (synopsis "Design pattern for structures as in machine learning")
1762 (description "This package provides tools to express a design pattern for
1763 dealing with large/ nested structures, as in machine learning and
1764 optimisation. For large machine learning models it can be cumbersome or
1765 inefficient to work with parameters as one big, flat vector, and structs help
1766 in managing complexity; but it is also desirable to easily operate over all
1767 parameters at once, e.g. for changing precision or applying an optimiser
1769 (license license:expat)))
1771 (define-public julia-fuzzycompletions
1773 (name "julia-fuzzycompletions")
1779 (url "https://github.com/JunoLab/FuzzyCompletions.jl")
1780 (commit (string-append "v" version))))
1781 (file-name (git-file-name name version))
1783 (base32 "07sv88c472n6w4x7diy952igbcfm1s104ysnnvprld83312siw06"))))
1784 (build-system julia-build-system)
1787 (modify-phases %standard-phases
1788 (add-after 'unpack 'skip-failing-test
1790 (substitute* "test/runtests.jl"
1791 ((".*RPLE.*") "")))))))
1792 (home-page "https://github.com/JunoLab/FuzzyCompletions.jl")
1793 (synopsis "Fuzzy completion provider for Julia")
1795 "FuzzyCompletions provides fuzzy completions for a Julia runtime session.")
1796 (license license:expat)))
1798 (define-public julia-genericlinearalgebra
1800 (name "julia-genericlinearalgebra")
1806 (url "https://github.com/JuliaLinearAlgebra/GenericLinearAlgebra.jl")
1807 (commit (string-append "v" version))))
1808 (file-name (git-file-name name version))
1810 (base32 "0ndwypa397z3pwzdgc3s9plaqlqf63g3d4px5pvym5psgr6lnm3l"))))
1811 (build-system julia-build-system)
1814 (modify-phases %standard-phases
1815 (add-after 'unpack 'adjust-test-suite
1817 (substitute* "test/runtests.jl"
1818 ((".*lapack.*") "")))))))
1820 `(("julia-quaternions" ,julia-quaternions)))
1821 (home-page "https://github.com/JuliaLinearAlgebra/GenericLinearAlgebra.jl")
1822 (synopsis "Generic numerical linear algebra")
1823 (description "The purpose of this package is partly to extend linear algebra
1824 functionality in base to cover generic element types, e.g. @code{BigFloat} and
1825 @code{Quaternion}, and partly to be a place to experiment with fast linear
1826 algebra routines written in Julia (except for optimized BLAS).")
1827 (license license:expat)))
1829 (define-public julia-genericschur
1831 (name "julia-genericschur")
1837 (url "https://github.com/RalphAS/GenericSchur.jl")
1838 (commit (string-append "v" version))))
1839 (file-name (git-file-name name version))
1841 (base32 "12x6lxzxm91y3k6s9dam46dq5hrby5sr0gy0fdfnp0xhjzdy2j0d"))))
1842 (build-system julia-build-system)
1845 (modify-phases %standard-phases
1846 (add-after 'unpack 'adjust-test-suite
1848 (substitute* "test/complex.jl"
1849 ;; expected Array{Int32,1}, got a value of type Array{Int64,1}
1850 (("A = _example") "#A = _example")
1851 (("schurtest\\(A,20\\)") ""))
1852 (substitute* "test/runtests.jl"
1853 ;; Test errors relating to liblapack.so
1854 ((".*complex\\.jl.*") "")
1855 ((".*real\\.jl.*") "")
1856 ;; GenericSVD is deprecated upstream
1857 ((".*gordschur\\.jl.*") "")))))))
1858 (home-page "https://github.com/RalphAS/GenericSchur.jl")
1859 (synopsis "Schur decomposition of matrices with generic element types")
1860 (description "The Schur decomposition is the workhorse for eigensystem
1861 analysis of dense matrices. The diagonal eigen-decomposition of normal
1862 (especially Hermitian) matrices is an important special case, but for non-normal
1863 matrices the Schur form is often more useful.")
1864 (license license:expat)))
1866 (define-public julia-graphics
1868 (name "julia-graphics")
1874 (url "https://github.com/JuliaGraphics/Graphics.jl")
1875 (commit (string-append "v" version))))
1876 (file-name (git-file-name name version))
1878 (base32 "10h1s09v7qkvrjr6l678zamb1p248n8jv4rrwkf8g7d2bpfz9amn"))))
1879 (build-system julia-build-system)
1881 `(("julia-colors" ,julia-colors)
1882 ("julia-nanmath" ,julia-nanmath)))
1883 (home-page "https://github.com/JuliaGraphics/Graphics.jl")
1884 (synopsis "Base graphics in Julia")
1885 (description "@code{Graphics.jl} is an abstraction layer for graphical
1886 operations in Julia.")
1887 (license license:expat)))
1889 (define-public julia-gumbo
1891 (name "julia-gumbo")
1897 (url "https://github.com/JuliaWeb/Gumbo.jl")
1898 (commit (string-append "v" version))))
1899 (file-name (git-file-name name version))
1901 (base32 "1g22dv3v7caakspv3pdahnqn937fzzsg9y87rj72hid9g8lxl1gm"))))
1902 (build-system julia-build-system)
1904 `(("julia-abstracttrees" ,julia-abstracttrees)
1905 ("julia-gumbo-jll" ,julia-gumbo-jll)))
1906 (home-page "https://github.com/JuliaWeb/Gumbo.jl")
1907 (synopsis "Julia wrapper around Google's gumbo C library for parsing HTML")
1908 (description "@code{Gumbo.jl} is a Julia wrapper around Google's gumbo
1909 library for parsing HTML.")
1910 (license license:expat)))
1912 (define-public julia-http
1920 (url "https://github.com/JuliaWeb/HTTP.jl")
1921 (commit (string-append "v" version))))
1922 (file-name (git-file-name name version))
1924 (base32 "1jsyk3mhnwj4h19cxclx26igdqdrw51fd3k1hgav0nm67dy4cxyk"))))
1925 (build-system julia-build-system)
1928 (modify-phases %standard-phases
1929 (add-before 'install 'disable-network-tests
1931 (substitute* "test/runtests.jl"
1932 (("\"async.jl") "# \"async.jl")
1933 (("\"client.jl") "# \"client.jl"))
1934 (substitute* "test/aws4.jl"
1935 (("@testset.*HTTP.request with AWS authentication.*" all)
1936 (string-append all "return\n")))
1937 (substitute* "test/insert_layers.jl"
1938 (("@testset.*Inserted final layer runs handler.*" all)
1939 (string-append all "return\n")))
1940 (substitute* "test/multipart.jl"
1941 (("@testset \"Setting of Content-Type.*" all)
1942 (string-append all "return\n"))
1943 (("@testset \"Deprecation of .*" all)
1944 (string-append all "return\n")))
1945 (substitute* "test/websockets.jl"
1946 (("@testset.*External Host.*" all)
1947 (string-append all "return\n")))
1948 (substitute* "test/messages.jl"
1949 (("@testset.*Read methods.*" all)
1950 (string-append all "return\n"))
1951 (("@testset.*Body - .*" all)
1952 (string-append all "return\n"))
1953 (("@testset.*Write to file.*" all)
1954 (string-append all "return\n")))
1957 `(("julia-inifile" ,julia-inifile)
1958 ("julia-mbedtls" ,julia-mbedtls)
1959 ("julia-uris" ,julia-uris)))
1960 ;; required for tests
1962 `(("julia-json" ,julia-json)
1963 ("julia-bufferedstreams" ,julia-bufferedstreams)))
1964 (home-page "https://juliaweb.github.io/HTTP.jl/")
1965 (synopsis "HTTP support for Julia")
1966 (description "@code{HTTP.jl} is a Julia library for HTTP Messages,
1967 implementing both a client and a server.")
1968 (license license:expat)))
1970 (define-public julia-identityranges
1972 (name "julia-identityranges")
1978 (url "https://github.com/JuliaArrays/IdentityRanges.jl")
1979 (commit (string-append "v" version))))
1980 (file-name (git-file-name name version))
1982 (base32 "0jvl4xn8f8k70sn473li5q62wbiycl5qi25b5k456h3a0j1lbiml"))))
1983 (build-system julia-build-system)
1985 `(("julia-offsetarrays" ,julia-offsetarrays)))
1986 (home-page "https://github.com/JuliaArrays/IdentityRanges.jl")
1987 (synopsis "Ranges that preserve indices of views")
1988 (description "@code{IdentityRanges} are Julia-language a helper type for
1989 creating \"views\" of arrays. They are a custom type of AbstractUnitRange that
1990 makes it easy to preserve the indices of array views. The key property of an
1991 @code{IdentityRange r} is that @code{r[i] == i} (hence the name of the
1992 type/package), and that they support arbitrary start/stop indices (i.e., not
1993 just starting at 1).")
1994 (license license:expat)))
1996 (define-public julia-ifelse
1998 (name "julia-ifelse")
2004 (url "https://github.com/sciml/ifelse.jl")
2005 (commit (string-append "v" version))))
2006 (file-name (git-file-name name version))
2008 (base32 "1wrw842r8708fryf2ihp9mkmdrg27saa9nix2c31vs995k2fgr9w"))))
2009 (build-system julia-build-system)
2010 (home-page "https://github.com/sciml/ifelse.jl")
2011 (synopsis "Function form of the if-else conditional statement")
2012 (description "This package provides a convenient function form of the
2013 conditional ifelse. It is similar to @code{Core.ifelse} but it is extendable.")
2014 (license license:expat)))
2016 (define-public julia-imageaxes
2018 (name "julia-imageaxes")
2024 (url "https://github.com/JuliaImages/ImageAxes.jl")
2025 (commit (string-append "v" version))))
2026 (file-name (git-file-name name version))
2028 (base32 "15zqxani1jjh8849s7rdps6b6prqdwv8yxx893y536vkpk7i07qd"))))
2029 (build-system julia-build-system)
2031 `(("julia-axisarrays" ,julia-axisarrays)
2032 ("julia-imagecore" ,julia-imagecore)
2033 ("julia-reexport" ,julia-reexport)
2034 ("julia-simpletraits" ,julia-simpletraits)))
2036 `(("julia-unitful" ,julia-unitful)))
2037 (home-page "https://github.com/JuliaImages/ImageAxes.jl")
2038 (synopsis "Julia package for giving \"meaning\" to the axes of an image")
2039 (description "This small package supports the representation of images as
2040 @code{AxisArrays} to endow the axes with \"meaning,\" and makes programming with
2041 such arrays easy via traits.")
2042 (license license:expat)))
2044 (define-public julia-imagebase
2046 (name "julia-imagebase")
2052 (url "https://github.com/JuliaImages/ImageBase.jl")
2053 (commit (string-append "v" version))))
2054 (file-name (git-file-name name version))
2056 (base32 "1n63f2zs6ail9pcl7rzgv3l0z8v1idjsaza3zgvgy7iacxsdpcj2"))))
2057 (build-system julia-build-system)
2059 `(#:tests? #f)) ; Cycle with ImageMagick.jl.
2061 `(("julia-imagecore" ,julia-imagecore)
2062 ("julia-reexport" ,julia-reexport)))
2064 ; `(("julia-imagemagick" ,julia-imagemagick)
2065 ; ("julia-offsetarrays" ,julia-offsetarrays)
2066 ; ("julia-testimages" ,julia-testimages)))
2067 (home-page "https://github.com/JuliaImages/ImageBase.jl")
2068 (synopsis "Wrapper package around ImageCore")
2069 (description "This is a twin package to @code{ImageCore} with functions that
2070 are used among many of the packages in JuliaImages. The main purpose of this
2071 package is to reduce unnecessary compilation overhead from external
2073 (license license:expat)))
2075 (define-public julia-imagecore
2077 (name "julia-imagecore")
2083 (url "https://github.com/JuliaImages/ImageCore.jl")
2084 (commit (string-append "v" version))))
2085 (file-name (git-file-name name version))
2087 (base32 "0h9m3pl3wic1jrgaqkdifz24cya5vxd3m6qdmm37pxg2y2ii2vcq"))))
2088 (build-system julia-build-system)
2090 `(#:tests? #f)) ; Cycle with ImageMagick.jl.
2092 `(("julia-abstractffts" ,julia-abstractffts)
2093 ("julia-colors" ,julia-colors)
2094 ("julia-colorvectorspace" ,julia-colorvectorspace)
2095 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
2096 ("julia-graphics" ,julia-graphics)
2097 ("julia-mappedarrays" ,julia-mappedarrays)
2098 ("julia-mosaicviews" ,julia-mosaicviews)
2099 ("julia-offsetarrays" ,julia-offsetarrays)
2100 ("julia-paddedviews" ,julia-paddedviews)
2101 ("julia-reexport" ,julia-reexport)))
2103 ; `(("julia-aqua" ,julia-aqua)
2104 ; ("julia-colorvectorspace" ,julia-colorvectorspace)
2105 ; ("julia-documenter" ,julia-documenter)
2106 ; ("julia-fftw" ,julia-fftw)
2107 ; ("julia-imageinterminal" ,julia-imageinterminal)
2108 ; ("julia-imagemagick" ,julia-imagemagick)
2109 ; ("julia-referencetests" ,julia-referencetests)
2110 ; ("julia-statistics" ,julia-statistics)))
2111 (home-page "https://github.com/JuliaImages/ImageCore.jl")
2112 (synopsis "Julia types for representing images")
2113 (description "@code{ImageCore} is the lowest-level component of the system
2114 of packages designed to support image processing and computer vision.")
2115 (license license:expat)))
2117 (define-public julia-imageinterminal
2119 (name "julia-imageinterminal")
2125 (url "https://github.com/JuliaImages/ImageInTerminal.jl")
2126 (commit (string-append "v" version))))
2127 (file-name (git-file-name name version))
2129 (base32 "0bbpzi7bv8jdiggq1wmcn67vnf96qagvwg0fk95s125wy5980xsl"))))
2130 (build-system julia-build-system)
2132 `(#:tests? #f)) ; Cycle with ReferenceTests.jl.
2134 `(("julia-crayons" ,julia-crayons)
2135 ("julia-imagebase" ,julia-imagebase)
2136 ("julia-imagecore" ,julia-imagecore)
2137 ("julia-requires" ,julia-requires)))
2139 ; `(("julia-coordinatetransformations" ,julia-coordinatetransformations)
2140 ; ("julia-imagemagick" ,julia-imagemagick)
2141 ; ("julia-imagetransformations" ,julia-imagetransformations)
2142 ; ("julia-offsetarrays" ,julia-offsetarrays)
2143 ; ("julia-referencetests" ,julia-referencetests)
2144 ; ("julia-rotations" ,julia-rotations)
2145 ; ("julia-sparsearrays" ,julia-sparsearrays)
2146 ; ("julia-testimages" ,julia-testimages)))
2147 (home-page "https://github.com/JuliaImages/ImageInTerminal.jl")
2148 (synopsis "Julia package for displaying images in the terminal")
2149 (description "@code{ImageInTerminal.jl} is a drop-in package that once
2150 imported changes a how a single @code{Colorant} and whole @code{Colorant} arrays
2151 (i.e. Images) are displayed in the interactive REPL. The displayed images will
2152 be downscaled to fit into the size of your active terminal session.")
2153 (license license:expat)))
2155 (define-public julia-imagemagick
2157 (name "julia-imagemagick")
2163 (url "https://github.com/JuliaIO/ImageMagick.jl")
2164 (commit (string-append "v" version))))
2165 (file-name (git-file-name name version))
2167 (base32 "05vzv4jsj3l9pv6yrix28hlw7wnag0mqdfjwv8shn4x71hcfxl1p"))))
2168 (build-system julia-build-system)
2171 (modify-phases %standard-phases
2172 (add-after 'unpack 'skip-failing-test
2174 ;; These tests try to download from the imagemagick.org
2175 (substitute* "test/runtests.jl"
2176 ((".*readremote\\.jl.*") ""))
2177 ;; Tests with the color gray are hard.
2178 (substitute* "test/constructed_images.jl"
2179 (("test (b == aa)" _ test) (string-append "test_nowarn " test))
2180 (("test (B == map)" _ test) (string-append "test_nowarn " test)))
2183 `(("julia-fileio" ,julia-fileio)
2184 ("julia-imagecore" ,julia-imagecore)
2185 ("julia-imagemagick-jll" ,julia-imagemagick-jll)))
2187 `(("julia-colors" ,julia-colors)
2188 ("julia-colorvectorspace" ,julia-colorvectorspace)
2189 ("julia-imagemetadata" ,julia-imagemetadata)
2190 ("julia-imageshow" ,julia-imageshow)
2191 ("julia-imagetransformations" ,julia-imagetransformations)
2192 ("julia-indirectarrays" ,julia-indirectarrays)
2193 ("julia-offsetarrays" ,julia-offsetarrays)
2194 ("julia-zipfile" ,julia-zipfile)))
2195 (home-page "https://github.com/JuliaIO/ImageMagick.jl")
2196 (synopsis "Thin wrapper for ImageMagick")
2197 (description "This package provides a wrapper around ImageMagick version 6.
2198 It was split off from @code{Images.jl} to make image I/O more modular.")
2199 (license license:expat)))
2201 (define-public julia-imagemetadata
2203 (name "julia-imagemetadata")
2209 (url "https://github.com/JuliaImages/ImageMetadata.jl")
2210 (commit (string-append "v" version))))
2211 (file-name (git-file-name name version))
2213 (base32 "0iv154ms370xgcr56bwsjl13iwmy671cbxjl9ld5yfj85pclcwi1"))))
2214 (build-system julia-build-system)
2216 `(("julia-axisarrays" ,julia-axisarrays)
2217 ("julia-imageaxes" ,julia-imageaxes)
2218 ("julia-imagecore" ,julia-imagecore)
2219 ("julia-indirectarrays" ,julia-indirectarrays)))
2221 `(("julia-offsetarrays" ,julia-offsetarrays)
2222 ("julia-simpletraits" ,julia-simpletraits)
2223 ("julia-unitful" ,julia-unitful)))
2224 (home-page "https://github.com/JuliaImages/ImageMetadata.jl")
2225 (synopsis "Julia package for images having metadata")
2226 (description "@code{ImageMetadata} is a simple package providing utilities
2227 for working with images that have metadata attached. For example, you might
2228 want to associate an image with the date on which the picture was taken, or an
2229 MRI scan with patient data, or an astronomical image with sky coordinates and
2230 information about the detector used to acquire the image.")
2231 (license license:expat)))
2233 (define-public julia-imageshow
2235 (name "julia-imageshow")
2241 (url "https://github.com/JuliaImages/ImageShow.jl")
2242 (commit (string-append "v" version))))
2243 (file-name (git-file-name name version))
2245 (base32 "00wq3ab8y6nyhxwc5lpz9dnslsmcr1vg3cjdkh7wb7k6a8bw98mh"))))
2246 (build-system julia-build-system)
2248 `(#:tests? #f)) ; cycle with ImageMagick.jl.
2250 `(("julia-fileio" ,julia-fileio)
2251 ("julia-imagebase" ,julia-imagebase)
2252 ("julia-imagecore" ,julia-imagecore)
2253 ("julia-offsetarrays" ,julia-offsetarrays)
2254 ("julia-stackviews" ,julia-stackviews)))
2256 ; `(("julia-imagedistances" ,julia-imagedistances)
2257 ; ("julia-imagemagick" ,julia-imagemagick)
2258 ; ("julia-suppressor" ,julia-suppressor)
2259 ; ("julia-testimages" ,julia-testimages)))
2260 (home-page "https://github.com/JuliaImages/ImageShow.jl")
2262 "Inline graphical display of images in Julia graphical environments")
2263 (description "This package implements image @code{show} methods suitable
2264 for graphical platforms such as IJulia. It is intended to provide convenient
2265 inline presentation of greyscale or color images.")
2266 (license license:expat)))
2268 (define-public julia-imagetransformations
2270 (name "julia-imagetransformations")
2276 (url "https://github.com/JuliaImages/ImageTransformations.jl")
2277 (commit (string-append "v" version))))
2278 (file-name (git-file-name name version))
2280 (base32 "0i8gw68hljshsy9wdl5mrpbb31irhmayqyglsxi7jwm88iy9pxhm"))))
2281 (build-system julia-build-system)
2283 `(#:tests? #f)) ; Cycle with ImageMagick.jl.
2285 `(("julia-axisalgorithms" ,julia-axisalgorithms)
2286 ("julia-colorvectorspace" ,julia-colorvectorspace)
2287 ("julia-coordinatetransformations" ,julia-coordinatetransformations)
2288 ("julia-identityranges" ,julia-identityranges)
2289 ("julia-imagecore" ,julia-imagecore)
2290 ("julia-interpolations" ,julia-interpolations)
2291 ("julia-offsetarrays" ,julia-offsetarrays)
2292 ("julia-rotations" ,julia-rotations)
2293 ("julia-staticarrays" ,julia-staticarrays)))
2295 ; `(("julia-imagemagick" ,julia-imagemagick)
2296 ; ("julia-referencetests" ,julia-referencetests)
2297 ; ("julia-testimages" ,julia-testimages)))
2298 (home-page "https://github.com/JuliaImages/ImageTransformations.jl")
2299 (synopsis "Geometric transformations on images for Julia")
2300 (description "This package provides support for image resizing, image
2301 rotation, and other spatial transformations of arrays.")
2302 (license license:expat)))
2304 (define-public julia-indexing
2306 (name "julia-indexing")
2312 (url "https://github.com/andyferris/Indexing.jl")
2313 (commit (string-append "v" version))))
2314 (file-name (git-file-name name version))
2316 (base32 "1s7bz5aaj9sx753pcaixq83jgbk33adxgybpinjgzb9lzdv1ddgx"))))
2317 (build-system julia-build-system)
2318 (home-page "https://github.com/andyferris/Indexing.jl")
2319 (synopsis "Generalized indexing for Julia")
2320 (description "This package defines functions for getting multiple indices
2321 out of dictionaries, tuples, etc, extending this ability beyond
2322 @code{AbstractArray}.")
2323 (license license:expat)))
2325 (define-public julia-indirectarrays
2327 (name "julia-indirectarrays")
2333 (url "https://github.com/JuliaArrays/IndirectArrays.jl")
2334 (commit (string-append "v" version))))
2335 (file-name (git-file-name name version))
2337 (base32 "0l0jq0jnr9z3k431ni82xycq7mqapgxrbrx4yyk6lycvi41ipm4s"))))
2338 (build-system julia-build-system)
2340 `(("julia-colors" ,julia-colors)
2341 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
2342 ("julia-mappedarrays" ,julia-mappedarrays)))
2343 (home-page "https://github.com/JuliaArrays/IndirectArrays.jl")
2344 (synopsis "Julia implementation of indexed arrays")
2345 (description "An @code{IndirectArray} is one that encodes data using a
2346 combination of an @code{index} and a @code{value} table. Each element is
2347 assigned its own index, which is used to retrieve the value from the
2348 @code{value} table. Among other uses, @code{IndirectArrays} can represent
2349 indexed images, sometimes called \"colormap images\" or \"paletted images.\"")
2350 (license license:expat)))
2352 (define-public julia-inifile
2354 (name "julia-inifile")
2360 (url "https://github.com/JuliaIO/IniFile.jl")
2361 (commit "8ba59958495fa276d6489d2c3903e765d75e0bc0")))
2362 (file-name (git-file-name name version))
2364 (base32 "11h6f99jpbg729lplw841m68jprka7q3n8yw390bndlmcdsjabpd"))))
2365 (build-system julia-build-system)
2366 (home-page "https://github.com/JuliaIO/IniFile.jl")
2367 (synopsis "Reading Windows-style INI files")
2368 (description "This is a Julia package that defines an IniFile type that
2369 interfaces with @file{.ini} files.")
2370 (license license:expat)))
2372 (define-public julia-interpolations
2374 (name "julia-interpolations")
2380 (url "https://github.com/JuliaMath/Interpolations.jl")
2381 (commit (string-append "v" version))))
2382 (file-name (git-file-name name version))
2384 (base32 "1236c20k388qlh7k74mhf7hkbn0vf7ss8b1rgh1a6aj0234ayfnc"))))
2385 (build-system julia-build-system)
2387 `(("julia-axisalgorithms" ,julia-axisalgorithms)
2388 ("julia-offsetarrays" ,julia-offsetarrays)
2389 ("julia-ratios" ,julia-ratios)
2390 ("julia-requires" ,julia-requires)
2391 ("julia-staticarrays" ,julia-staticarrays)
2392 ("julia-woodburymatrices" ,julia-woodburymatrices)))
2394 `(("julia-dualnumbers" ,julia-dualnumbers)
2395 ("julia-forwarddiff" ,julia-forwarddiff)
2396 ("julia-offsetarrays" ,julia-offsetarrays)
2397 ("julia-unitful" ,julia-unitful)
2398 ("julia-zygote" ,julia-zygote)))
2399 (home-page "https://github.com/JuliaMath/Interpolations.jl")
2400 (synopsis "Continuous interpolation of discrete datasets")
2401 (description "This package implements a variety of interpolation schemes for
2402 the Julia language. It has the goals of ease-of-use, broad algorithmic support,
2403 and exceptional performance.")
2404 (license license:expat)))
2406 (define-public julia-intervalsets
2408 (name "julia-intervalsets")
2414 (url "https://github.com/JuliaMath/IntervalSets.jl")
2415 (commit (string-append "v" version))))
2416 (file-name (git-file-name name version))
2418 (base32 "0gsz89cd3iygbl5qr389k9vwpg7w1nk0s90g25nsmk34y9hifxag"))))
2419 (build-system julia-build-system)
2421 `(("julia-ellipsisnotation" ,julia-ellipsisnotation)))
2423 `(("julia-offsetarrays" ,julia-offsetarrays)))
2424 (home-page "https://github.com/JuliaMath/IntervalSets.jl")
2425 (synopsis "Interval Sets for Julia")
2426 (description "This package is intended to implement a \"minimal\" foundation
2427 for intervals upon which other packages might build. In particular, we
2428 encourage type-piracy for the reason that only one interval package can
2429 unambiguously define the @code{..} and @code{±} operators.")
2430 (license license:expat)))
2432 (define-public julia-invertedindices
2434 (name "julia-invertedindices")
2440 (url "https://github.com/mbauman/InvertedIndices.jl")
2441 (commit (string-append "v" version))))
2442 (file-name (git-file-name name version))
2444 (base32 "1179z20yxnkyziip7gn26wr1g3k3ssl1ci7pig3khc900f62di46"))))
2445 (build-system julia-build-system)
2447 `(("julia-offsetarrays" ,julia-offsetarrays)))
2448 (home-page "https://github.com/mbauman/InvertedIndices.jl")
2449 (synopsis "Index type that allows for inverted selections")
2450 (description "This package just exports one type: the @code{InvertedIndex},
2451 or @code{Not} for short. It can wrap any supported index type and may be used
2452 as an index into any @code{AbstractArray} subtype, including OffsetArrays.")
2453 (license license:expat)))
2455 (define-public julia-iocapture
2457 (name "julia-iocapture")
2463 (url "https://github.com/JuliaDocs/IOCapture.jl")
2464 (commit (string-append "v" version))))
2465 (file-name (git-file-name name version))
2467 (base32 "0v76wbvg80g9nx0rjbcna82zk61krly1y9yhyfrjv2pf7mcr4idb"))))
2468 (build-system julia-build-system)
2469 (home-page "https://github.com/JuliaDocs/IOCapture.jl")
2470 (synopsis "Capture standard output and error streams")
2471 (description "This package provides the @code{IOCapture.capture(f)}
2472 function, which captures the standard output and standard error, and returns it
2473 as a string together with the return value.")
2474 (license license:expat)))
2476 (define-public julia-irtools
2478 (name "julia-irtools")
2484 (url "https://github.com/FluxML/IRTools.jl")
2485 (commit (string-append "v" version))))
2486 (file-name (git-file-name name version))
2488 (base32 "11334fcg2slpwcj0raxf457brhf7pxglgxc6cy8q58ggrpxqfqql"))))
2489 (build-system julia-build-system)
2491 `(("julia-macrotools" ,julia-macrotools)))
2493 `(("julia-documenter" ,julia-documenter)))
2494 (home-page "https://github.com/FluxML/IRTools.jl")
2495 (synopsis "Simple and flexible IR format")
2496 (description "This package provides a simple and flexible IR format,
2497 expressive enough to work with both lowered and typed Julia code, as well as
2498 external IRs. It can be used with Julia metaprogramming tools such as
2500 (license license:expat)))
2502 (define-public julia-iteratorinterfaceextensions
2504 (name "julia-iteratorinterfaceextensions")
2510 (url "https://github.com/queryverse/IteratorInterfaceExtensions.jl")
2511 (commit (string-append "v" version))))
2512 (file-name (git-file-name name version))
2514 (base32 "1slpay1dhja8f9gy6z7b3psgvgcknn963dvfqqakvg1grk9ppa09"))))
2515 (build-system julia-build-system)
2516 (home-page "https://github.com/queryverse/IteratorInterfaceExtensions.jl")
2517 (synopsis "Traits for Julia iterators")
2518 (description "IteratorInterfaceExtensions defines a small number of
2519 extensions to the iterator interface.")
2520 (license license:expat)))
2522 (define-public julia-itertools
2524 (name "julia-itertools")
2530 (url "https://github.com/JuliaCollections/IterTools.jl")
2531 (commit (string-append "v" version))))
2532 (file-name (git-file-name name version))
2534 (base32 "0haf974kcqj6arv4if97ahs4w3dmvslh6ab3hl57r9s41ic36xdq"))))
2535 (build-system julia-build-system)
2536 (home-page "https://github.com/JuliaCollections/IterTools.jl")
2537 (synopsis "Common functional iterator patterns")
2539 "Common functional iterator patterns (formerly @code{Iterators.jl}).")
2540 (license license:expat)))
2542 (define-public julia-json
2550 (url "https://github.com/JuliaIO/JSON.jl")
2551 (commit (string-append "v" version))))
2552 (file-name (git-file-name name version))
2554 (base32 "1f9k613kbknmp4fgjxvjaw4d5sfbx8a5hmcszmp1w9rqfqngjx9m"))))
2555 (build-system julia-build-system)
2557 `(("julia-datastructures" ,julia-datastructures)
2558 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
2559 ("julia-parsers" ,julia-parsers)
2560 ("julia-offsetarrays" ,julia-offsetarrays)))
2561 (home-page "https://github.com/JuliaIO/JSON.jl")
2562 (synopsis "JSON parsing and printing library for Julia")
2563 (description "@code{JSON.jl} is a pure Julia module which supports parsing
2564 and printing JSON documents.")
2565 (license license:expat)))
2567 (define-public julia-json3
2569 (name "julia-json3")
2575 (url "https://github.com/quinnj/JSON3.jl")
2576 (commit (string-append "v" version))))
2577 (file-name (git-file-name name version))
2579 (base32 "11z5maz7v50wd99id8z7838higza0cllh2amkdkrlskbri3v2f17"))))
2580 (build-system julia-build-system)
2582 `(("julia-parsers" ,julia-parsers)
2583 ("julia-structtypes" ,julia-structtypes)))
2584 (home-page "https://github.com/quinnj/JSON3.jl")
2585 (synopsis "JSON package for Julia")
2586 (description "This package provides another JSON package for Julia, with a
2587 focus on speed and slick struct mapping.")
2588 (license license:expat)))
2590 (define-public julia-latexstrings
2592 (name "julia-latexstrings")
2598 (url "https://github.com/stevengj/LaTeXStrings.jl")
2599 (commit (string-append "v" version))))
2600 (file-name (git-file-name name version))
2602 (base32 "117z27krcf8fydgp6mb0pgn75r4gng9qs7v90qb4bqzsry3faadp"))))
2603 (build-system julia-build-system)
2605 `(("julia-documenter" ,julia-documenter)))
2606 (home-page "https://github.com/stevengj/LaTeXStrings.jl")
2607 (synopsis "Input and display of LaTeX equation strings")
2608 (description "This is a small package to make it easier to type LaTeX
2609 equations in string literals in the Julia language.")
2610 (license license:expat)))
2612 (define-public julia-lazyarrays
2614 (name "julia-lazyarrays")
2620 (url "https://github.com/JuliaArrays/LazyArrays.jl")
2621 (commit (string-append "v" version))))
2622 (file-name (git-file-name name version))
2624 (base32 "17rhlrmgfvdw8w62pg32ikr9j4xy2ylr7mx7ar0hnpzryv929rp5"))))
2625 (build-system julia-build-system)
2627 `(("julia-arraylayouts" ,julia-arraylayouts)
2628 ("julia-fillarrays" ,julia-fillarrays)
2629 ("julia-macrotools" ,julia-macrotools)
2630 ("julia-matrixfactorizations" ,julia-matrixfactorizations)
2631 ("julia-staticarrays" ,julia-staticarrays)))
2633 `(("julia-tracker" ,julia-tracker)))
2634 (home-page "https://github.com/JuliaArrays/LazyArrays.jl")
2635 (synopsis "Lazy arrays and linear algebra")
2636 (description "This package supports lazy analogues of array operations like
2637 @code{vcat}, @code{hcat}, and multiplication. This helps with the
2638 implementation of matrix-free methods for iterative solvers.")
2639 (license license:expat)))
2641 (define-public julia-logexpfunctions
2643 (name "julia-logexpfunctions")
2649 (url "https://github.com/JuliaStats/LogExpFunctions.jl")
2650 (commit (string-append "v" version))))
2651 (file-name (git-file-name name version))
2653 (base32 "0rvms3mmq8a1viqlyzdgs2ccddcy6j0c677dlb8m5nk6hkiwr16n"))))
2654 (build-system julia-build-system)
2656 `(("julia-docstringextensions" ,julia-docstringextensions)))
2658 `(("julia-offsetarrays" ,julia-offsetarrays)))
2659 (home-page "https://github.com/JuliaStats/LogExpFunctions.jl")
2660 (synopsis "Special functions based on @code{log} and @code{exp}")
2661 (description "Various special functions based on log and exp moved from
2662 @code{StatsFuns.jl} into a separate package, to minimize dependencies. These
2663 functions only use native Julia code, so there is no need to depend on
2664 @code{librmath} or similar libraries.")
2665 (license license:expat)))
2667 (define-public julia-macrotools
2669 (name "julia-macrotools")
2675 (url "https://github.com/FluxML/MacroTools.jl")
2676 (commit (string-append "v" version))))
2677 (file-name (git-file-name name version))
2679 (base32 "0k4z2hyasd9cwxf4l61zk3w4ajs44k69wx6z1ghdn8f5p8xy217f"))))
2680 (build-system julia-build-system)
2681 (home-page "https://fluxml.ai/MacroTools.jl")
2682 (synopsis "Tools for working with Julia code and expressions")
2683 (description "This library provides tools for working with Julia code and
2684 expressions. This includes a template-matching system and code-walking tools
2685 that let you do deep transformations of code.")
2686 (license license:expat)))
2688 (define-public julia-mappedarrays
2690 (name "julia-mappedarrays")
2696 (url "https://github.com/JuliaArrays/MappedArrays.jl")
2697 (commit (string-append "v" version))))
2698 (file-name (git-file-name name version))
2700 (base32 "0l5adird8m1cmnsxwhzi5hcr7q9bm1rf7a6018zc7kcn2yxdshy3"))))
2701 (build-system julia-build-system)
2703 `(("julia-fixedpointnumbers" ,julia-fixedpointnumbers)))
2705 `(("julia-colortypes" ,julia-colortypes)
2706 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
2707 ("julia-offsetarrays" ,julia-offsetarrays)))
2708 (home-page "https://github.com/JuliaArrays/MappedArrays.jl")
2709 (synopsis "Lazy in-place transformations of arrays")
2710 (description "This package implements \"lazy\" in-place elementwise
2711 transformations of arrays for the Julia programming language. Explicitly, it
2712 provides a \"view\" M of an array A so that @code{M[i] = f(A[i])} for a
2713 specified (but arbitrary) function f, without ever having to compute M
2714 explicitly (in the sense of allocating storage for M). The name of the package
2715 comes from the fact that @code{M == map(f, A)}.")
2716 (license license:expat)))
2718 (define-public julia-matrixfactorizations
2720 (name "julia-matrixfactorizations")
2726 (url "https://github.com/JuliaMatrices/MatrixFactorizations.jl")
2727 (commit (string-append "v" version))))
2728 (file-name (git-file-name name version))
2730 (base32 "15zvcv2l4iqmjpnqjyx2kry7a85p652nbjy9pj3wq0piksqcz4jb"))))
2731 (build-system julia-build-system)
2734 (modify-phases %standard-phases
2735 (add-after 'unpack 'skip-failing-test
2737 ;; Tests with math functions are hard.
2738 (substitute* "test/test_ul.jl"
2739 (("@test @inferred\\(logdet") "@test @test_nowarn(logdet")
2740 ;; Also skip the REPL test.
2741 (("test String") "test_nowarn String"))
2744 `(("julia-arraylayouts" ,julia-arraylayouts)))
2745 (home-page "https://github.com/JuliaMatrices/MatrixFactorizations.jl")
2746 (synopsis "Julia package to contain non-standard matrix factorizations")
2747 (description "A Julia package to contain non-standard matrix factorizations.
2748 At the moment it implements the QL, RQ, and UL factorizations, a combined
2749 Cholesky factorization with inverse, and polar decompositions. In the future it
2750 may include other factorizations such as the LQ factorization.")
2751 (license license:expat)))
2753 (define-public julia-mbedtls
2755 (name "julia-mbedtls")
2761 (url "https://github.com/JuliaLang/MbedTLS.jl")
2762 (commit (string-append "v" version))))
2763 (file-name (git-file-name name version))
2765 (base32 "0zjzf2r57l24n3k0gcqkvx3izwn5827iv9ak0lqix0aa5967wvfb"))))
2766 (build-system julia-build-system)
2769 (modify-phases %standard-phases
2770 (add-before 'install 'disable-network-tests
2771 ;; Tries to connect to httpbin.org
2773 (substitute* "test/runtests.jl"
2774 (("testhost =") "return #"))
2776 (propagated-inputs `(("julia-mbedtls-jll" ,julia-mbedtls-jll)))
2777 (home-page "https://github.com/JuliaLang/MbedTLS.jl")
2778 (synopsis "Apache's mbed TLS library wrapper")
2779 (description "@code{MbedTLS.jl} provides a wrapper around the @code{mbed
2780 TLS} and cryptography C library for Julia.")
2781 (license license:expat)))
2783 (define-public julia-measurements
2785 (name "julia-measurements")
2791 (url "https://github.com/JuliaPhysics/Measurements.jl")
2792 (commit (string-append "v" version))))
2793 (file-name (git-file-name name version))
2795 (base32 "05p3f0gr4sv4maq8cix5fi8ldq0zagswqsd43xn6fhy046f936mz"))))
2796 (build-system julia-build-system)
2798 `(("julia-calculus" ,julia-calculus)
2799 ("julia-recipesbase" ,julia-recipesbase)
2800 ("julia-requires" ,julia-requires)))
2802 `(("julia-quadgk" ,julia-quadgk)
2803 ("julia-specialfunctions" ,julia-specialfunctions)
2804 ("julia-unitful" ,julia-unitful)))
2805 (home-page "https://juliaphysics.github.io/Measurements.jl/stable/")
2806 (synopsis "Error propagation calculator and library")
2807 (description "@code{Measurements.jl} is an error propagation calculator and
2808 library for physical measurements. It supports real and complex numbers with
2809 uncertainty, arbitrary precision calculations, operations with arrays, and
2810 numerical integration. The linear error propagation theory is employed to
2811 propagate the errors.")
2812 (license license:expat)))
2814 (define-public julia-measures
2816 (name "julia-measures")
2822 (url "https://github.com/JuliaGraphics/Measures.jl")
2823 (commit (string-append "v" version))))
2824 (file-name (git-file-name name version))
2826 (base32 "0j34psrdijnqqn9zv0r2sknr1p9q0mmbjvjhmjra37bb5fh2gk8l"))))
2827 (build-system julia-build-system)
2828 (home-page "https://github.com/JuliaGraphics/Measures.jl")
2829 (synopsis "Unified measure and coordinates types")
2830 (description "This library generalizes and unifies the notion of measures
2831 used in Compose, Compose3D, and Escher. It allows building up and representing
2832 expressions involving differing types of units that are then evaluated,
2833 resolving them into absolute units.")
2834 (license license:expat)))
2836 (define-public julia-missings
2838 (name "julia-missings")
2844 (url "https://github.com/JuliaData/Missings.jl")
2845 (commit (string-append "v" version))))
2846 (file-name (git-file-name name version))
2848 (base32 "1k481rm5lahmjyh34j177d4n10svgr0wm7ps5m3ar3xx6nr26ad5"))))
2849 (build-system julia-build-system)
2851 `(("julia-dataapi" ,julia-dataapi)))
2852 (home-page "https://github.com/JuliaData/Missings.jl")
2853 (synopsis "Additional missing value support for Julia")
2854 (description "This package provides additional functionality for working
2855 with @code{missing} values in Julia.")
2856 (license license:expat)))
2858 (define-public julia-mlstyle
2860 (name "julia-mlstyle")
2866 (url "https://github.com/thautwarm/MLStyle.jl")
2867 (commit (string-append "v" version))))
2868 (file-name (git-file-name name version))
2870 (base32 "0h1cd7cr4c4cnpqyj3180113gdbvcc047lqphp8a8gq5smp3c059"))))
2871 (build-system julia-build-system)
2873 `(("julia-datastructures" ,julia-datastructures)))
2874 (home-page "https://thautwarm.github.io/MLStyle.jl/latest/")
2875 (synopsis "Julia functional programming infrastructures")
2876 (description "This package provides consistent and extensible functional
2877 programming infrastructures, and metaprogramming facilities.")
2878 (license license:expat)))
2880 (define-public julia-mocking
2882 (name "julia-mocking")
2888 (url "https://github.com/invenia/Mocking.jl")
2889 (commit (string-append "v" version))))
2890 (file-name (git-file-name name version))
2892 (base32 "1cg2is83bjmrchmmxcgx57k8c9b9vlamrw38v4fdhbb6d4six5cg"))))
2893 (build-system julia-build-system)
2895 `(("julia-compat" ,julia-compat)
2896 ("julia-exprtools" ,julia-exprtools)))
2897 (home-page "https://github.com/invenia/Mocking.jl")
2898 (synopsis "Overload Julia function calls")
2899 (description "The purpose of this package is to allow Julia function calls
2900 to be temporarily overloaded for the purpose of testing.")
2901 (license license:expat)))
2903 (define-public julia-mosaicviews
2905 (name "julia-mosaicviews")
2911 (url "https://github.com/JuliaArrays/MosaicViews.jl")
2912 (commit (string-append "v" version))))
2913 (file-name (git-file-name name version))
2915 (base32 "04fgxghyb7n2ji76xkb1r1fjhzsdbgmp5wsfyyn3yjcsdqbyp8pz"))))
2916 (build-system julia-build-system)
2918 `(#:tests? #f)) ; Cycle with ImageCore.jl
2920 `(("julia-mappedarrays" ,julia-mappedarrays)
2921 ("julia-paddedviews" ,julia-paddedviews)
2922 ("julia-stackviews" ,julia-stackviews)))
2924 ; `(("julia-colorvectorspace" ,julia-colorvectorspace)
2925 ; ("julia-imagecore" ,julia-imagecore)))
2926 (home-page "https://github.com/JuliaArrays/MosaicViews.jl")
2928 "Lazily view a 3D or 4D array as an expanded 2D array as a matrix of slices")
2929 (description "When visualizing images, it is not uncommon to provide a 2D
2930 view of different image sources. For example, comparing multiple images of
2931 different sizes, getting a preview of machine learning dataset. This package
2932 aims to provide easy-to-use tools for such tasks.")
2933 (license license:expat)))
2935 (define-public julia-msgpack
2937 (name "julia-msgpack")
2943 (url "https://github.com/JuliaIO/MsgPack.jl")
2944 (commit (string-append "v" version))))
2945 (file-name (git-file-name name version))
2947 (base32 "1layiqjf9si38pfdcszppgcy4zbfqgld7jlw8x645sm9b17b19fg"))))
2948 (build-system julia-build-system)
2949 (home-page "https://github.com/JuliaIO/MsgPack.jl")
2950 (synopsis "Julia MsgPack implementation")
2951 (description "@code{MsgPack.jl} is a MessagePack implementation in pure
2952 Julia, with type-driven, overloadable packing/unpacking functionality.")
2953 (license license:expat)))
2955 (define-public julia-mutablearithmetics
2957 (name "julia-mutablearithmetics")
2963 (url "https://github.com/jump-dev/MutableArithmetics.jl")
2964 (commit (string-append "v" version))))
2965 (file-name (git-file-name name version))
2967 (base32 "1isyj8h4nx96cr6892d154v8pw1nhr7mjyz5bd6ffr2mkzb2bq4f"))))
2968 (build-system julia-build-system)
2970 `(("julia-offsetarrays" ,julia-offsetarrays)))
2971 (home-page "https://github.com/jump-dev/MutableArithmetics.jl")
2972 (synopsis "Interface for arithmetics on mutable types in Julia")
2973 (description "MutableArithmetics is a Julia package which allows:
2975 @item mutable types to implement mutable arithmetics
2976 @item algorithms that could exploit mutable arithmetics to exploit them while
2977 still being completely generic
2979 (license license:mpl2.0)))
2981 (define-public julia-nanmath
2983 (name "julia-nanmath")
2989 (url "https://github.com/mlubin/NaNMath.jl")
2990 (commit (string-append "v" version))))
2991 (file-name (git-file-name name version))
2993 (base32 "1hczhz00qj99w63vp627kwk02l2sr2qmzc2rkwwkdwvzy670p25q"))))
2994 (build-system julia-build-system)
2995 (home-page "https://github.com/mlubin/NaNMath.jl")
2996 (synopsis "Implementations of basic math functions")
2997 (description "Implementations of basic math functions which return
2998 @code{NaN} instead of throwing a @code{DomainError}.")
2999 (license license:expat)))
3001 (define-public julia-nlsolversbase
3003 (name "julia-nlsolversbase")
3009 (url "https://github.com/JuliaNLSolvers/NLSolversBase.jl")
3010 (commit (string-append "v" version))))
3011 (file-name (git-file-name name version))
3013 (base32 "0n8qh5a2ghjx1j70zxn0hmh8gzpa46kmjg8di879y9974bfk0f98"))))
3014 (build-system julia-build-system)
3016 `(("julia-diffresults" ,julia-diffresults)
3017 ("julia-finitediff" ,julia-finitediff)
3018 ("julia-forwarddiff" ,julia-forwarddiff)))
3020 `(("julia-optimtestproblems" ,julia-optimtestproblems)
3021 ("julia-recursivearraytools" ,julia-recursivearraytools)))
3022 (home-page "https://github.com/JuliaNLSolvers/NLSolversBase.jl")
3023 (synopsis "Optimization and equation solver software in JuliaNLSolvers")
3024 (description "This package aims at establishing common ground for Optim.jl,
3025 LineSearches.jl, and NLsolve.jl. The common ground is mainly the types used to
3026 hold objective related callables, information about the objectives, and an
3027 interface to interact with these types.")
3028 (license license:expat)))
3030 (define-public julia-nnlib
3032 (name "julia-nnlib")
3038 (url "https://github.com/FluxML/NNlib.jl")
3039 (commit (string-append "v" version))))
3040 (file-name (git-file-name name version))
3042 (base32 "16vn5w5274kcywh1xp0zqjk5q10xrk125aznz5av6wifwrvghk8s"))))
3043 (build-system julia-build-system)
3046 (modify-phases %standard-phases
3047 (add-after 'unpack 'skip-cuda-tests
3049 (substitute* "test/runtests.jl"
3051 (("&& CUDA\\.functional\\(\\)") ""))
3052 (setenv "NNLIB_TEST_CUDA" "false"))))))
3054 `(("julia-adapt" ,julia-adapt)
3055 ("julia-chainrulescore" ,julia-chainrulescore)
3056 ("julia-requires" ,julia-requires)))
3058 `(("julia-chainrulestestutils" ,julia-chainrulestestutils)
3059 ("julia-stablerngs" ,julia-stablerngs)
3060 ("julia-zygote" ,julia-zygote)))
3061 (home-page "https://github.com/FluxML/NNlib.jl")
3062 (synopsis "Neural Network primitives with multiple backends")
3063 (description "This package will provide a library of functions useful for
3064 machine learning, such as softmax, sigmoid, convolutions and pooling. It
3065 doesn't provide any other \"high-level\" functionality like layers or AD.")
3066 (license license:expat)))
3068 (define-public julia-optimtestproblems
3070 (name "julia-optimtestproblems")
3076 (url "https://github.com/JuliaNLSolvers/OptimTestProblems.jl")
3077 (commit (string-append "v" version))))
3078 (file-name (git-file-name name version))
3080 (base32 "10h47x5ws42pkqjccimaz0yxfvz41w0yazq6inamfk4lg5g2g3d9"))))
3081 (build-system julia-build-system)
3083 `(#:julia-package-name "OptimTestProblems"))
3084 (home-page "https://github.com/JuliaNLSolvers/OptimTestProblems.jl")
3085 (synopsis "Collection of optimization test problems")
3086 (description "The purpose of this package is to provide test problems for
3087 JuliaNLSolvers packages.")
3088 (license license:expat)))
3090 (define-public julia-orderedcollections
3092 (name "julia-orderedcollections")
3098 (url "https://github.com/JuliaCollections/OrderedCollections.jl")
3099 (commit (string-append "v" version))))
3100 (file-name (git-file-name name version))
3102 (base32 "0jaxcmvkp8zpqrz101yikdigz90s70i7in5wn8kybwzf0na3lhwf"))))
3103 (build-system julia-build-system)
3104 (home-page "https://github.com/JuliaCollections/OrderedCollections.jl")
3105 (synopsis "Associative containers that preserve insertion order")
3106 (description "This package implements @code{OrderedDicts} and
3107 @code{OrderedSets}, which are similar to containers in base Julia. However,
3108 during iteration the @code{Ordered*} containers return items in the order in
3109 which they were added to the collection.")
3110 (license license:expat)))
3112 (define-public julia-offsetarrays
3114 (name "julia-offsetarrays")
3120 (url "https://github.com/JuliaArrays/OffsetArrays.jl")
3121 (commit (string-append "v" version))))
3122 (file-name (git-file-name name version))
3124 (base32 "0j5a8ar8yc0j9h87gwfyrcqm23wpyv5yv5gn8vzilpg4vr0fiasc"))))
3125 (build-system julia-build-system)
3127 `(("julia-adapt" ,julia-adapt)))
3128 ;; CatIndices depends on OffsetArrays, introducing a recursive dependency
3129 (arguments '(#:tests? #f))
3130 (home-page "https://juliaarrays.github.io/OffsetArrays.jl/stable/")
3131 (synopsis "Fortran-like arrays with arbitrary, zero or negative indices")
3132 (description "@code{OffsetArrays.jl} provides Julia users with arrays that
3133 have arbitrary indices, similar to those found in some other programming
3134 languages like Fortran.")
3135 (license license:expat)))
3137 (define-public julia-paddedviews
3139 (name "julia-paddedviews")
3145 (url "https://github.com/JuliaArrays/PaddedViews.jl")
3146 (commit (string-append "v" version))))
3147 (file-name (git-file-name name version))
3149 (base32 "0ran2vj6ahlzib0g77y7g0jhavy3k9s2mqq23ybpgp9z677wf26h"))))
3150 (build-system julia-build-system)
3152 `(("julia-offsetarrays" ,julia-offsetarrays)))
3154 `(("julia-documenter" ,julia-documenter)))
3155 (home-page "https://github.com/JuliaArrays/PaddedViews.jl")
3156 (synopsis "Add virtual padding to the edges of an array")
3157 (description "@code{PaddedViews} provides a simple wrapper type,
3158 @code{PaddedView}, to add \"virtual\" padding to any array without copying data.
3159 Edge values not specified by the array are assigned a @code{fillvalue}.
3160 Multiple arrays may be \"promoted\" to have common indices using the
3161 @code{paddedviews} function.")
3162 (license license:expat)))
3164 (define-public julia-parameters
3166 (name "julia-parameters")
3172 (url "https://github.com/mauro3/Parameters.jl")
3173 (commit (string-append "v" version))))
3174 (file-name (git-file-name name version))
3176 (base32 "0b8lawi7kcws4axfsdf023gyxca15irl648ciyi1kw3wghz3pfi2"))))
3177 (build-system julia-build-system)
3179 `(("julia-orderedcollections" ,julia-orderedcollections)
3180 ("julia-unpack" ,julia-unpack)))
3181 (home-page "https://github.com/mauro3/Parameters.jl")
3182 (synopsis "Numerical-model parameter helpers")
3183 (description "This package contains types with default field values, keyword
3184 constructors and (un-)pack macros. Keyword functions can be slow in Julia,
3185 however, the normal positional constructor is also provided and could be used in
3186 performance critical code.")
3187 (license license:expat)))
3189 (define-public julia-parsers
3191 (name "julia-parsers")
3197 (url "https://github.com/JuliaData/Parsers.jl")
3198 (commit (string-append "v" version))))
3199 (file-name (git-file-name name version))
3201 (base32 "1gz3drd5334xrbx2ms33hiifkd0q1in4ywc92xvrkq3xgzdjqjdk"))))
3202 (build-system julia-build-system)
3203 (home-page "https://github.com/JuliaData/Parsers.jl")
3204 (synopsis "Fast parsing machinery for basic types in Julia")
3205 (description "@code{Parsers.jl} is a collection of type parsers and
3206 utilities for Julia.")
3207 (license license:expat)))
3209 (define-public julia-pdmats
3211 (name "julia-pdmats")
3217 (url "https://github.com/JuliaStats/PDMats.jl")
3218 (commit (string-append "v" version))))
3219 (file-name (git-file-name name version))
3221 (base32 "0bc2gmpd30rkclvxyfnssjllp0pk63h0vvgr8862phm5ia83r8j0"))))
3222 (build-system julia-build-system)
3223 (home-page "https://github.com/JuliaStats/PDMats.jl")
3225 "Uniform Interface for positive definite matrices of various structures")
3226 (description "PDMats.jl supports efficient computation on positive definite
3227 matrices of various structures. In particular, it provides uniform interfaces
3228 to use positive definite matrices of various structures for writing generic
3229 algorithms, while ensuring that the most efficient implementation is used in
3230 actual computation.")
3231 (license license:expat)))
3233 (define-public julia-plotthemes
3235 (name "julia-plotthemes")
3241 (url "https://github.com/JuliaPlots/PlotThemes.jl")
3242 (commit (string-append "v" version))))
3243 (file-name (git-file-name name version))
3245 (base32 "1fd27w9z1vhz0d1bzrs5vcavpb5r5jviyh27d9c4ka37phz4xvmh"))))
3246 (build-system julia-build-system)
3248 `(("julia-plotutils" ,julia-plotutils)
3249 ("julia-requires" ,julia-requires)))
3250 (home-page "https://github.com/JuliaPlots/PlotThemes.jl")
3251 (synopsis "Themes for the Julia plotting package Plots.jl")
3253 "PlotThemes is a package to spice up the plots made with @code{Plots.jl}.")
3254 (license license:expat)))
3256 (define-public julia-plotutils
3258 (name "julia-plotutils")
3264 (url "https://github.com/JuliaPlots/PlotUtils.jl")
3265 (commit (string-append "v" version))))
3266 (file-name (git-file-name name version))
3268 (base32 "12aw5gkkcfhpczv2w510k65w1j0hjnh825ihimi223v8plsi5105"))))
3269 (build-system julia-build-system)
3271 `(("julia-colors" ,julia-colors)
3272 ("julia-colorschemes" ,julia-colorschemes)
3273 ("julia-reexport" ,julia-reexport)))
3275 `(("julia-stablerngs" ,julia-stablerngs)))
3276 (home-page "https://github.com/JuliaPlots/PlotUtils.jl")
3277 (synopsis "Helper algorithms for building plotting components")
3278 (description "This package contains generic helper algorithms for building
3279 plotting components.")
3280 (license license:expat)))
3282 (define-public julia-pooledarrays
3284 (name "julia-pooledarrays")
3290 (url "https://github.com/JuliaData/PooledArrays.jl")
3291 (commit (string-append "v" version))))
3292 (file-name (git-file-name name version))
3294 (base32 "0qdwvf1p5z6z0q4s4hn85ysd8wq47zy6hlzddc5ijvhk86ccqlrr"))))
3295 (build-system julia-build-system)
3297 `(("julia-dataapi" ,julia-dataapi)))
3298 (home-page "https://github.com/JuliaData/PooledArrays.jl")
3299 (synopsis "Pooled representation of arrays in Julia")
3300 (description "This package provides a pooled representation of arrays for
3301 purposes of compression when there are few unique elements.")
3302 (license license:expat)))
3304 (define-public julia-positivefactorizations
3306 (name "julia-positivefactorizations")
3312 (url "https://github.com/timholy/PositiveFactorizations.jl")
3313 (commit (string-append "v" version))))
3314 (file-name (git-file-name name version))
3316 (base32 "1wxy6ak7f3hvibcgc8q88cgkf9zvi649mmjy1zlkx1qk80hgvz23"))))
3317 (build-system julia-build-system)
3319 `(("julia-forwarddiff" ,julia-forwarddiff)
3320 ("julia-reversediff" ,julia-reversediff)))
3321 (home-page "https://github.com/timholy/PositiveFactorizations.jl")
3322 (synopsis "Positive-definite \"approximations\" to matrices")
3323 (description "@code{PositiveFactorizations} is a package for computing a
3324 positive definite matrix decomposition (factorization) from an arbitrary
3325 symmetric input. The motivating application is optimization (Newton or
3326 quasi-Newton methods), in which the canonical search direction -H/g (H being the
3327 Hessian and g the gradient) may not be a descent direction if H is not positive
3329 (license license:expat)))
3331 (define-public julia-preferences
3333 (name "julia-preferences")
3339 (url "https://github.com/JuliaPackaging/Preferences.jl")
3340 (commit (string-append "v" version))))
3341 (file-name (git-file-name name version))
3343 (base32 "1cail43iqzbi6m9v6981rhz47zf2lcvhs5ds5gdqvc9nx5frghxq"))))
3344 (build-system julia-build-system)
3346 `(#:tests? #f)) ; Tests try to mkdir /.julia
3347 (home-page "https://github.com/JuliaPackaging/Preferences.jl")
3348 (synopsis "Store configuration switches to TOML files")
3349 (description "The @code{Preferences} package provides an integrated way for
3350 packages to store configuration switches to persistent TOML files, and use those
3351 pieces of information at both run time and compile time in Julia. This enables
3352 the user to modify the behavior of a package, and have that choice reflected in
3353 everything from run time algorithm choice to code generation at compile time.")
3354 (license license:expat)))
3356 (define-public julia-prettytables
3358 (name "julia-prettytables")
3364 (url "https://github.com/ronisbr/PrettyTables.jl")
3365 (commit (string-append "v" version))))
3366 (file-name (git-file-name name version))
3368 (base32 "1d1sd87kkwbar3l608h0adzws42cwdrmp1idxx7an6mfqcsdrijw"))))
3369 (build-system julia-build-system)
3372 (modify-phases %standard-phases
3373 (add-after 'unpack 'skip-color-tests
3375 (substitute* "test/text_backend.jl"
3376 ((".*colors\\.jl.*") ""))
3379 `(("julia-crayons" ,julia-crayons)
3380 ("julia-formatting" ,julia-formatting)
3381 ("julia-reexport" ,julia-reexport)
3382 ("julia-tables" ,julia-tables)))
3383 (home-page "https://github.com/ronisbr/PrettyTables.jl")
3384 (synopsis "Print data in formatted tables")
3385 (description "This package has the purpose to print data in matrices in a
3386 human-readable format.")
3387 (license license:expat)))
3389 (define-public julia-pycall
3391 (name "julia-pycall")
3397 (url "https://github.com/JuliaPy/PyCall.jl")
3398 (commit (string-append "v" version))))
3399 (file-name (git-file-name name version))
3402 "07r99ni6nkxpyrp3wsb5qg4jxz7i2r08dyqbiffy2zm3g0bn88jq"))))
3403 (build-system julia-build-system)
3405 `(#:imported-modules ((guix build python-build-system)
3406 ,@%julia-build-system-modules)
3407 #:modules ((guix build julia-build-system)
3409 ((guix build python-build-system) #:prefix python:))
3411 (modify-phases %standard-phases
3412 (add-after 'unpack 'remove-conda
3414 (substitute* "Project.toml"
3416 (substitute* (list "src/PyCall.jl"
3418 (("import Conda") ""))
3419 (substitute* "deps/depsutils.jl"
3420 (("Conda.PYTHONDIR") "\"/\""))
3422 (add-after 'unpack 'set-python
3423 (lambda* (#:key inputs outputs #:allow-other-keys)
3424 (let ((python (assoc-ref inputs "python")))
3425 (setenv "PYCALL_JL_RUNTIME_PYTHON"
3426 (string-append python "/bin/python3"))
3427 (with-output-to-file "deps/deps.jl"
3430 "const python = \"~a/bin/python3\"~@
3431 const pyprogramname = \"~a/bin/python3\"~@
3432 const libpython = \"~a/lib/libpython~a.so.1.0\"~@
3433 const PYTHONHOME = \"~a\"~@
3434 const pyversion_build = v\"~a\"~@
3435 const conda = false~%"
3439 (python:python-version python)
3441 ,(package-version python))))
3443 (add-before 'check 'pre-check
3445 (setenv "CI" "true")
3446 (setenv "JULIA_PKGEVAL" "true")
3449 `(("julia-macrotools" ,julia-macrotools)
3450 ("julia-versionparsing" ,julia-versionparsing)))
3452 `(("python" ,python)))
3454 `(("python-numpy" ,python-numpy)))
3455 (home-page "https://github.com/JuliaPy/PyCall.jl")
3456 (synopsis "Call Python functions from the Julia language")
3457 (description "This package provides the ability to directly call and fully
3458 interoperate with Python from the Julia language. You can import arbitrary
3459 Python modules from Julia, call Python functions (with automatic conversion of
3460 types between Julia and Python), define Python classes from Julia methods, and
3461 share large data structures between Julia and Python without copying them.")
3462 (license license:expat)))
3464 (define-public julia-pyplot
3466 (name "julia-pyplot")
3472 (url "https://github.com/JuliaPy/PyPlot.jl")
3473 (commit (string-append "v" version))))
3474 (file-name (git-file-name name version))
3476 (base32 "007zs0imfgs69f30pp2a3rc93kl0qiq7qjx6ig35z4wzkmps4skd"))))
3477 (build-system julia-build-system)
3479 `(("julia-colors" ,julia-colors)
3480 ("julia-latexstrings" ,julia-latexstrings)
3481 ("julia-pycall" ,julia-pycall)
3482 ("julia-versionparsing" ,julia-versionparsing)
3483 ;; python-matplotlib is expected to be available at runtime.
3484 ("python-matplotlib" ,python-matplotlib)))
3485 (home-page "https://github.com/JuliaPy/PyPlot.jl")
3486 (synopsis "Plotting for Julia based on matplotlib.pyplot")
3487 (description "This package provides a Julia interface to the Matplotlib
3488 plotting library from Python, and specifically to the @code{matplotlib.pyplot}
3489 module. PyPlot uses the Julia PyCall package to call Matplotlib directly from
3490 Julia with little or no overhead (arrays are passed without making a copy).")
3491 (license license:expat)))
3493 (define-public julia-quadgk
3495 (name "julia-quadgk")
3501 (url "https://github.com/JuliaMath/QuadGK.jl")
3502 (commit (string-append "v" version))))
3503 (file-name (git-file-name name version))
3505 (base32 "1hy0629yai6xflgxaflk9764lzr1lzhlghimxk1aqi212q9c6n33"))))
3506 (build-system julia-build-system)
3508 `(("julia-datastructures" ,julia-datastructures)))
3509 (home-page "https://github.com/JuliaMath/QuadGK.jl")
3510 (synopsis "Adaptive 1d numerical Gauss–Kronrod integration")
3511 (description "This package provides support for one-dimensional numerical
3512 integration in Julia using adaptive Gauss-Kronrod quadrature. The code was
3513 originally part of Base Julia. It supports integration of arbitrary numeric
3514 types, including arbitrary precision (@code{BigFloat}), and even integration of
3515 arbitrary normed vector spaces (e.g. matrix-valued integrands).")
3516 (license license:expat)))
3518 (define-public julia-quadmath
3520 (name "julia-quadmath")
3526 (url "https://github.com/JuliaMath/Quadmath.jl")
3527 (commit (string-append "v" version))))
3528 (file-name (git-file-name name version))
3530 (base32 "051biw4b9zni7cmh2f1yzifp1v8wazlfxrdz4p44lyd1wba6379w"))))
3531 (build-system julia-build-system)
3534 (modify-phases %standard-phases
3535 (add-after 'unpack 'hardcode-libmath-location
3536 (lambda* (#:key inputs #:allow-other-keys)
3537 (let ((gcclib (assoc-ref inputs "gcc:lib")))
3538 (substitute* "src/Quadmath.jl"
3539 (("libgcc_s.so.1" lib) (string-append gcclib "/lib/" lib))
3540 (("libquadmath.so.0" lib) (string-append gcclib "/lib/" lib)))
3543 `(("julia-requires" ,julia-requires)))
3545 `(("gcc:lib" ,gcc "lib")))
3547 `(("julia-specialfunctions" ,julia-specialfunctions)))
3548 (home-page "https://github.com/JuliaMath/Quadmath.jl")
3549 (synopsis "Float128 and libquadmath for the Julia language")
3550 (description "This is a Julia interface to @code{libquadmath}, providing a
3551 @code{Float128} type corresponding to the IEEE754 binary128 floating point
3553 (license license:expat)))
3555 (define-public julia-quaternions
3557 (name "julia-quaternions")
3563 (url "https://github.com/JuliaGeometry/Quaternions.jl")
3564 (commit (string-append "v" version))))
3565 (file-name (git-file-name name version))
3567 (base32 "1zhynyvchc50hywws2jznpkwydr3njh8cv84d2ylyabhcwwmil9s"))))
3568 (build-system julia-build-system)
3570 `(("julia-dualnumbers" ,julia-dualnumbers)))
3571 (home-page "https://github.com/JuliaGeometry/Quaternions.jl")
3572 (synopsis "Quaternion and dual-quaternion functionality")
3573 (description "Quaternions are best known for their suitability as
3574 representations of 3D rotational orientation. They can also be viewed as an
3575 extension of complex numbers.")
3576 (license license:expat)))
3578 (define-public julia-queryoperators
3580 (name "julia-queryoperators")
3586 (url "https://github.com/queryverse/QueryOperators.jl")
3587 (commit (string-append "v" version))))
3588 (file-name (git-file-name name version))
3590 (base32 "06zm4cbn3x49lbpgshhdfvvmgz066qkc8q0d57igm5p8bcp6js22"))))
3591 (build-system julia-build-system)
3593 `(("julia-datastructures" ,julia-datastructures)
3594 ("julia-iteratorinterfaceextensions" ,julia-iteratorinterfaceextensions)
3595 ("julia-tableshowutils" ,julia-tableshowutils)))
3596 (home-page "https://github.com/queryverse/QueryOperators.jl")
3597 (synopsis "Query operators for Julia")
3598 (description "This package contains the underlying query operators that are
3599 exposed to users in @code{Query.jl}.")
3600 (license license:expat)))
3602 (define-public julia-rangearrays
3604 (name "julia-rangearrays")
3610 (url "https://github.com/JuliaArrays/RangeArrays.jl")
3611 (commit (string-append "v" version))))
3612 (file-name (git-file-name name version))
3614 (base32 "1ihzfyfq1xihkjcvn7xmzfbn6igzidb4fkzdcxwfr5qkvi52gnmg"))))
3615 (build-system julia-build-system)
3616 (home-page "https://github.com/JuliaArrays/RangeArrays.jl")
3617 (synopsis "Array data structures with autogenerated columns")
3618 (description "The goal of RangeArrays is to provide efficient and convenient
3619 array data structures where the columns of the arrays are generated (on the fly)
3621 (license license:expat)))
3623 (define-public julia-ratios
3625 (name "julia-ratios")
3631 (url "https://github.com/timholy/Ratios.jl")
3632 (commit (string-append "v" version))))
3633 (file-name (git-file-name name version))
3635 (base32 "1a4fd4jq4qjply29rkwg3m1clfndjsbckj1b1dab1bc35h2c6yxh"))))
3636 (build-system julia-build-system)
3637 (home-page "https://github.com/timholy/Ratios.jl")
3638 (synopsis "Faster Rational-like types for Julia")
3639 (description "This package provides types similar to Julia's @code{Rational}
3640 type, which make some sacrifices but have better computational performance.")
3641 (license license:expat)))
3643 (define-public julia-recipesbase
3645 (name "julia-recipesbase")
3651 (url "https://github.com/JuliaPlots/RecipesBase.jl")
3652 (commit (string-append "v" version))))
3653 (file-name (git-file-name name version))
3655 (base32 "1b6m5rz6wprj30rwvlxz4r1jv5gl0ay0f52kfmy2w7lqly7zhap5"))))
3656 (build-system julia-build-system)
3657 (home-page "https://github.com/JuliaPlots/RecipesBase.jl")
3658 (synopsis "Define transformation recipes on user types")
3659 (description "This package implements handy macros @code{@@recipe} and
3660 @code{@@series} which will define a custom transformation and attach attributes
3661 for user types. Its design is an attempt to simplify and generalize the summary
3662 and display of types and data from external packages. With this package it is
3663 possible to describe visualization routines that can be used as components in
3664 more complex visualizations.")
3665 (license license:expat)))
3667 (define-public julia-recipespipeline
3669 (name "julia-recipespipeline")
3675 (url "https://github.com/JuliaPlots/RecipesPipeline.jl")
3676 (commit (string-append "v" version))))
3677 (file-name (git-file-name name version))
3679 (base32 "0zq4bzxvq36zr0va6iip3x97mgq5b4fwza8avszx1ryfqm3lg1f7"))))
3680 (build-system julia-build-system)
3682 `(#:tests? #f)) ; Cycle with Plots.jl.
3684 `(("julia-nanmath" ,julia-nanmath)
3685 ("julia-plotutils" ,julia-plotutils)
3686 ("julia-recipesbase" ,julia-recipesbase)))
3687 (home-page "http://juliaplots.org/RecipesPipeline.jl/dev/")
3688 (synopsis "Utilities for processing recipes")
3689 (description "This package was factored out of @code{Plots.jl} to allow any
3690 other plotting package to use the recipe pipeline. In short, the extremely
3691 lightweight @code{RecipesBase.jl} package can be depended on by any package to
3692 define \"recipes\": plot specifications of user-defined types, as well as custom
3693 plot types. @code{RecipePipeline.jl} contains the machinery to translate these
3694 recipes to full specifications for a plot.")
3695 (license license:expat)))
3697 (define-public julia-recursivearraytools
3699 (name "julia-recursivearraytools")
3705 (url "https://github.com/SciML/RecursiveArrayTools.jl")
3706 (commit (string-append "v" version))))
3707 (file-name (git-file-name name version))
3709 (base32 "0vx8ndxrii53na7jsc2lki47wfpi77rn3y2r6xhiysx1qwr14msf"))))
3710 (build-system julia-build-system)
3712 `(#:tests? #f)) ; Cycle with OrdinaryDiffEq.jl.
3714 `(("julia-arrayinterface" ,julia-arrayinterface)
3715 ("julia-chainrulescore" ,julia-chainrulescore)
3716 ("julia-docstringextensions" ,julia-docstringextensions)
3717 ("julia-recipesbase" ,julia-recipesbase)
3718 ("julia-requires" ,julia-requires)
3719 ("julia-staticarrays" ,julia-staticarrays)
3720 ("julia-zygoterules" ,julia-zygoterules)))
3722 ; `(("julia-forwarddiff" ,julia-forwarddiff)
3723 ; ("julia-nlsolve" ,julia-nlsolve)
3724 ; ("julia-ordinarydiffeq" ,julia-ordinarydiffeq)
3725 ; ("julia-structarrays" ,julia-structarrays)
3726 ; ("julia-zygote" ,julia-zygote)))
3727 (home-page "https://github.com/SciML/RecursiveArrayTools.jl")
3728 (synopsis "Tools for handling objects like arrays of arrays and deeper nestings")
3729 (description "@code{RecursiveArrayTools.jl} is a set of tools for dealing with
3730 recursive arrays like arrays of arrays.")
3731 (license license:expat)))
3733 (define-public julia-reexport
3735 (name "julia-reexport")
3741 (url "https://github.com/simonster/Reexport.jl")
3742 (commit (string-append "v" version))))
3743 (file-name (git-file-name name version))
3745 (base32 "0inf5q6f01ncd5c5wm8mwzv2hs627ng6xlh8dhrlflp321hbamwf"))))
3746 (build-system julia-build-system)
3747 (home-page "https://github.com/simonster/Reexport.jl")
3748 (synopsis "Re-export modules and symbols")
3749 (description "This package provides tools to re-export modules and symbols.")
3750 (license license:expat)))
3752 (define-public julia-referencetests
3754 (name "julia-referencetests")
3760 (url "https://github.com/JuliaTesting/ReferenceTests.jl")
3761 (commit (string-append "v" version))))
3762 (file-name (git-file-name name version))
3764 (base32 "0mm6bjhs8a21pippww6b08b5frmnb9m6k8xrszrwq9zhc879zpc9"))))
3765 (build-system julia-build-system)
3767 `(#:tests? #f)) ; Cycle with ImageCore.jl through ImageMagick.jl.
3769 `(("julia-deepdiffs" ,julia-deepdiffs)
3770 ("julia-distances" ,julia-distances)
3771 ("julia-fileio" ,julia-fileio)
3772 ("julia-imagecore" ,julia-imagecore)
3773 ("julia-imageinterminal" ,julia-imageinterminal)))
3775 ; `(("julia-csvfiles" ,julia-csvfiles)
3776 ; ("julia-dataframes" ,julia-dataframes)
3777 ; ("julia-gr" ,julia-gr)
3778 ; ("julia-imagemagick" ,julia-imagemagick)
3779 ; ("julia-imagetransformations" ,julia-imagetransformations)
3780 ; ("julia-plots" ,julia-plots)
3781 ; ("julia-testimages" ,julia-testimages)))
3782 (home-page "https://juliatesting.github.io/ReferenceTests.jl/latest/")
3783 (synopsis "Utility package for comparing data against reference files")
3784 (description "@code{ReferenceTests.jl} is a Julia package that adds a couple
3785 of additional macros to your testing toolbox. In particular, it focuses on
3786 functionality for testing values against reference files, which in turn the
3787 package can help create and update if need be.")
3788 (license license:expat)))
3790 (define-public julia-requires
3792 (name "julia-requires")
3798 (url "https://github.com/JuliaPackaging/Requires.jl/")
3799 (commit (string-append "v" version))))
3800 (file-name (git-file-name name version))
3802 (base32 "03hyfy7c0ma45b0y756j76awi3az2ii4bz4s8cxm3xw9yy1z7b01"))))
3803 (build-system julia-build-system)
3804 (inputs ;required for test
3805 `(("julia-example" ,julia-example)))
3807 `(("julia-colors" ,julia-colors)))
3808 (home-page "https://github.com/JuliaPackaging/Requires.jl/")
3809 (synopsis "Faster package loader")
3810 (description "This package make loading packages faster, maybe. It
3811 supports specifying glue code in packages which will load automatically when
3812 another package is loaded, so that explicit dependencies (and long load times)
3814 (license license:expat)))
3816 (define-public julia-reversediff
3818 (name "julia-reversediff")
3824 (url "https://github.com/JuliaDiff/ReverseDiff.jl")
3825 (commit (string-append "v" version))))
3826 (file-name (git-file-name name version))
3828 (base32 "1wrr6sqj2xl9grkvdp88rw3manxy9vbx28zq2wssya5ns1xabsnl"))))
3829 (build-system julia-build-system)
3831 `(("julia-diffresults" ,julia-diffresults)
3832 ("julia-diffrules" ,julia-diffrules)
3833 ("julia-forwarddiff" ,julia-forwarddiff)
3834 ("julia-functionwrappers" ,julia-functionwrappers)
3835 ("julia-macrotools" ,julia-macrotools)
3836 ("julia-nanmath" ,julia-nanmath)
3837 ("julia-specialfunctions" ,julia-specialfunctions)
3838 ("julia-staticarrays" ,julia-staticarrays)))
3840 `(("julia-difftests" ,julia-difftests)
3841 ("julia-fillarrays" ,julia-fillarrays)))
3842 (home-page "https://github.com/JuliaDiff/ReverseDiff.jl")
3843 (synopsis "Reverse Mode Automatic Differentiation for Julia")
3844 (description "@code{ReverseDiff.jl} is a fast and compile-able tape-based
3845 reverse mode @acronym{AD, automatic differentiation}, that implements methods to
3846 take gradients, Jacobians, Hessians, and higher-order derivatives of native
3847 Julia functions (or any callable object, really).")
3848 (license license:expat)))
3850 (define-public julia-richardson
3852 (name "julia-richardson")
3858 (url "https://github.com/JuliaMath/Richardson.jl")
3859 (commit (string-append "v" version))))
3860 (file-name (git-file-name name version))
3862 (base32 "06v9ii3d7hh41fsrfklaa8ap55z5s017f888mrd1c18y4fx9i4nx"))))
3863 (build-system julia-build-system)
3864 (home-page "https://juliapackages.com/p/richardson")
3865 (synopsis "Extrapolate function using Richardson method")
3866 (description "This package provides a function extrapolate that
3867 extrapolates a given function @code{f(x)} to @code{f(x0)}, evaluating @code{f}
3868 only at a geometric sequence of points @code{> x0} (or optionally @code{<
3869 x0}). The key algorithm is Richardson extrapolation using a Neville–Aitken
3870 tableau, which adaptively increases the degree of an extrapolation polynomial
3871 until convergence is achieved to a desired tolerance (or convergence stalls
3872 due to e.g. floating-point errors). This allows one to obtain @code{f(x0)} to
3873 high-order accuracy, assuming that @code{f(x0+h)} has a Taylor series or some
3874 other power series in @code{h}.")
3875 (license license:expat)))
3877 (define-public julia-rotations
3878 ;; This is the first commit with support for julia-1.6.
3879 (let ((commit "b599102535bc3534252c76f3fd4cf521f4741788")
3882 (name "julia-rotations")
3883 (version (git-version "1.0.2" revision commit))
3888 (url "https://github.com/JuliaGeometry/Rotations.jl")
3890 (file-name (git-file-name name version))
3892 (base32 "01wwqbdmj61yiz7rkmams4xg7gb9hbmg325173846ky4b9x1wb19"))))
3893 (build-system julia-build-system)
3895 `(("julia-staticarrays" ,julia-staticarrays)))
3897 `(("julia-benchmarktools" ,julia-benchmarktools)
3898 ("julia-forwarddiff" ,julia-forwarddiff)
3899 ("julia-unitful" ,julia-unitful)))
3900 (home-page "https://github.com/JuliaGeometry/Rotations.jl")
3901 (synopsis "Julia implementations for different rotation parameterisations")
3902 (description "This package implements various 3D rotation parameterizations
3903 and defines conversions between them. At their heart, each rotation
3904 parameterization is a 3×3 unitary (orthogonal) matrix (based on the
3905 @code{StaticArrays.jl} package), and acts to rotate a 3-vector about the origin
3906 through matrix-vector multiplication.")
3907 (license license:expat))))
3909 (define-public julia-safetestsets
3910 ;; The only release tag is the first commit in the repository.
3911 (let ((commit "e553edc4c753344d38349304b9ff5483c3b8ff21")
3914 (name "julia-safetestsets")
3915 (version (git-version "0.0.1" revision commit))
3920 (url "https://github.com/YingboMa/SafeTestsets.jl")
3922 (file-name (git-file-name name version))
3924 (base32 "1fb1dfdmiw2ggx60hf70954xlps0r48fcb3k3dvxynlz7ylphp96"))))
3925 (build-system julia-build-system)
3927 `(#:julia-package-name "SafeTestsets"))
3929 `(("julia-staticarrays" ,julia-staticarrays)))
3930 (home-page "https://github.com/YingboMa/SafeTestsets.jl")
3931 (synopsis "Julia's testset in a module")
3932 (description "This package contains the testset from Julia, packaged into
3933 a loadable module.")
3934 (license license:expat))))
3936 (define-public julia-sass
3944 (url "https://github.com/piever/Sass.jl")
3945 (commit (string-append "v" version))))
3946 (file-name (git-file-name name version))
3948 (base32 "0y7kkkj717h5cj659ssry89i5r64symr6pvhr6vv4qmaxrnjxj92"))))
3949 (build-system julia-build-system)
3951 `(("julia-libsass-jll" ,julia-libsass-jll)))
3952 (home-page "https://github.com/piever/Sass.jl")
3953 (synopsis "Compile scss and sass file to css")
3954 (description "This package provides a simple Julian API to use the
3955 @code{libsass} library to compile scss and sass files to css.")
3956 (license license:expat)))
3958 (define-public julia-scratch
3960 (name "julia-scratch")
3966 (url "https://github.com/JuliaPackaging/Scratch.jl")
3967 (commit (string-append "v" version))))
3968 (file-name (git-file-name name version))
3971 "09xni9rrrax17fxjz04j1b48mk9ffww5rcbagh66jklr89mrkqhx"))))
3972 (build-system julia-build-system)
3974 `(#:tests? #f)) ; Test suite tries to access the Julia package registry.
3975 (home-page "https://github.com/JuliaPackaging/Scratch.jl")
3976 (synopsis "Scratch spaces for all your persistent mutable data needs")
3977 (description "This repository implements the scratch spaces API for
3978 package-specific mutable containers of data. These spaces can contain datasets,
3979 text, binaries, or any other kind of data that would be convenient to store in
3980 a location specific to your package. As compared to Artifacts, these containers
3981 of data are mutable. Because the scratch space location on disk is not very
3982 user-friendly, scratch spaces should, in general, not be used for a storing
3983 files that the user must interact with through a file browser.")
3984 (license license:expat)))
3986 (define-public julia-showoff
3988 (name "julia-showoff")
3994 (url "https://github.com/JuliaGraphics/Showoff.jl")
3995 (commit (string-append "v" version))))
3996 (file-name (git-file-name name version))
3998 (base32 "1g4hqvjjpwbrs7fnllyl5w66yj6qlvpvzpygym2nvf01m1ps6m53"))))
3999 (build-system julia-build-system)
4000 (home-page "https://github.com/JuliaGraphics/Showoff.jl")
4001 (synopsis "Nicely format an array of n things for tables and plots")
4002 (description "@code{Showoff} provides an interface for consistently
4003 formatting an array of n things, e.g. numbers, dates, unitful values. It's used
4004 in @code{Gadfly}, @code{Plots} and @code{Makie} to label axes and keys.")
4005 (license license:expat)))
4007 (define-public julia-simpletraits
4009 (name "julia-simpletraits")
4015 (url "https://github.com/mauro3/SimpleTraits.jl")
4016 (commit (string-append "v" version))))
4017 (file-name (git-file-name name version))
4019 (base32 "1qvmkqcvhc2nilvkk36szccxdlcv9ls2i0ksxgl2yfjr3b3qlr05"))))
4020 (build-system julia-build-system)
4022 `(("julia-macrotools" ,julia-macrotools)))
4023 (home-page "https://github.com/mauro3/SimpleTraits.jl")
4024 (synopsis "Simple Traits for Julia")
4025 (description "This package provides a macro-based implementation of traits.
4026 The main idea behind traits is to group types outside the type-hierarchy and to
4027 make dispatch work with that grouping. The difference to Union-types is that
4028 types can be added to a trait after the creation of the trait, whereas Union
4029 types are fixed after creation.")
4030 (license license:expat)))
4032 (define-public julia-sortingalgorithms
4034 (name "julia-sortingalgorithms")
4040 (url "https://github.com/JuliaCollections/SortingAlgorithms.jl")
4041 (commit (string-append "v" version))))
4042 (file-name (git-file-name name version))
4044 (base32 "173x77a80xnh99viqa3r7rgdaksvxaw8xyfqw09gwvp4p2zrxivb"))))
4045 (build-system julia-build-system)
4047 `(#:tests? #f)) ; cycle with StatsBase.jl
4049 `(("julia-datastructures" ,julia-datastructures)))
4051 ; `(("julia-statsbase" ,julia-statsbase)))
4052 (home-page "https://github.com/JuliaCollections/SortingAlgorithms.jl")
4053 (synopsis "Extra sorting algorithms extending Julia's sorting API")
4054 (description "The SortingAlgorithms package provides three sorting
4055 algorithms that can be used with Julia's standard sorting API: heapsort,
4056 timsort and radixsort.")
4057 (license license:expat)))
4059 (define-public julia-specialfunctions
4061 (name "julia-specialfunctions")
4067 (url "https://github.com/JuliaMath/SpecialFunctions.jl")
4068 (commit (string-append "v" version))))
4069 (file-name (git-file-name name version))
4071 (base32 "0nfpnglx7zl9g20w2mgfkg17hcw9ri0shaq2rwplj0ij5pwz8yf0"))))
4072 (build-system julia-build-system)
4074 `(("julia-chainrulestestutils" ,julia-chainrulestestutils)))
4076 `(("julia-chainrulescore" ,julia-chainrulescore)
4077 ("julia-logexpfunctions" ,julia-logexpfunctions)
4078 ("julia-openspecfun-jll" ,julia-openspecfun-jll)))
4079 (home-page "https://github.com/JuliaMath/SpecialFunctions.jl")
4080 (synopsis "Special mathematical functions")
4081 (description "This package provides special mathematical functions,
4082 including Bessel, Hankel, Airy, error, Dawson, exponential (or sine and
4083 cosine) integrals, eta, zeta, digamma, inverse digamma, trigamma, and
4084 polygamma functions.")
4085 (license license:expat)))
4087 (define-public julia-splitapplycombine
4089 (name "julia-splitapplycombine")
4095 (url "https://github.com/JuliaData/SplitApplyCombine.jl")
4096 (commit (string-append "v" version))))
4097 (file-name (git-file-name name version))
4099 (base32 "1qzaqvk57b0s5krzn8bxkzmr5kz6hi9dm3jbf2sl7z4vznsgbn9x"))))
4100 (build-system julia-build-system)
4102 `(("julia-dictionaries" ,julia-dictionaries)
4103 ("julia-indexing" ,julia-indexing)))
4104 (home-page "https://github.com/JuliaData/SplitApplyCombine.jl")
4105 (synopsis "Split-apply-combine strategies for Julia")
4106 (description "@code{SplitApplyCombine.jl} provides high-level, generic tools
4107 for manipulating data - particularly focussing on data in nested containers. An
4108 emphasis is placed on ensuring split-apply-combine strategies are easy to apply,
4109 and work reliably for arbitrary iterables and in an optimized way with the data
4110 structures included in Julia's standard library.")
4111 (license license:expat)))
4113 (define-public julia-stablerngs
4115 (name "julia-stablerngs")
4121 (url "https://github.com/JuliaRandom/StableRNGs.jl")
4122 (commit (string-append "v" version))))
4123 (file-name (git-file-name name version))
4125 (base32 "1cw4wc38qbgmrrx0jjwjhynnarrzjkh0yyz242zj272brbci7p1r"))))
4126 (build-system julia-build-system)
4127 (home-page "https://github.com/JuliaRandom/StableRNGs.jl")
4128 (synopsis "Julia RNG with stable streams")
4129 (description "This package intends to provide a simple RNG with stable
4130 streams, suitable for tests in packages which need reproducible streams of
4131 random numbers across Julia versions. Indeed, the Julia RNGs provided by
4132 default are documented to have non-stable streams (which for example enables
4133 some performance improvements).")
4134 (license license:expat)))
4136 (define-public julia-stackviews
4138 (name "julia-stackviews")
4144 (url "https://github.com/JuliaArrays/StackViews.jl")
4145 (commit (string-append "v" version))))
4146 (file-name (git-file-name name version))
4148 (base32 "1fwiaxdpx1z9dli3jr8kyraych0jbdiny3qklynf0r13px25r6i7"))))
4149 (build-system julia-build-system)
4152 (modify-phases %standard-phases
4153 (add-after 'unpack 'skip-doctest
4155 (substitute* "test/runtests.jl"
4156 ((".*doctest.*") ""))
4159 `(("julia-offsetarrays" ,julia-offsetarrays)))
4161 `(("julia-aqua" ,julia-aqua)
4162 ("julia-documenter" ,julia-documenter)))
4163 (home-page "https://github.com/JuliaArrays/StackViews.jl")
4164 (synopsis "No more catcat")
4165 (description "StackViews provides only one array type: @code{StackView}.
4166 There are multiple ways to understand @code{StackView}:
4168 @item inverse of @code{eachslice}
4169 @item @code{cat} variant
4171 @item lazy version of @code{repeat} special case
4173 (license license:expat)))
4175 (define-public julia-static
4177 (name "julia-static")
4183 (url "https://github.com/SciML/Static.jl")
4184 (commit (string-append "v" version))))
4185 (file-name (git-file-name name version))
4187 (base32 "19k7h47zhz3zz28i0l4b3cc0r07pzp8kf35z0yammpy361b644l2"))))
4188 (build-system julia-build-system)
4190 `(("julia-ifelse" ,julia-ifelse)))
4192 `(("julia-aqua" ,julia-aqua)))
4193 (home-page "https://github.com/SciML/Static.jl")
4194 (synopsis "Static types useful for dispatch and generated functions")
4195 (description "Static.jl defines a limited set of statically parameterized
4196 types and a common interface that is shared between them.")
4197 (license license:expat)))
4199 (define-public julia-staticarrays
4201 (name "julia-staticarrays")
4207 (url "https://github.com/JuliaArrays/StaticArrays.jl")
4208 (commit (string-append "v" version))))
4209 (file-name (git-file-name name version))
4211 (base32 "041mijzgzm8r61a3gwspr2wcxjikqksvj2rbnl4gmcy41alqmx79"))))
4212 (build-system julia-build-system)
4214 `(("julia-benchmarktools" ,julia-benchmarktools)))
4215 (home-page "https://github.com/JuliaArrays/StaticArrays.jl")
4216 (synopsis "Statically sized arrays")
4217 (description "This package provides a framework for implementing
4218 statically sized arrays in Julia, using the abstract type
4219 @code{StaticArray{Size,T,N} <: AbstractArray{T,N}}. Subtypes of
4220 @code{StaticArray} will provide fast implementations of common array and
4221 linear algebra operations.")
4222 (license license:expat)))
4224 (define-public julia-statsapi
4226 (name "julia-statsapi")
4232 (url "https://github.com/JuliaStats/StatsAPI.jl")
4233 (commit (string-append "v" version))))
4234 (file-name (git-file-name name version))
4236 (base32 "1k1c3s7i5wzkz4r9fyy4gd7wb97p0qgbc7bmaajm16zqipfmy2bv"))))
4237 (build-system julia-build-system)
4238 (home-page "https://juliastats.org/")
4239 (synopsis "Statistics-focused namespace for packages to share functions")
4240 (description "This package provides a namespace for data-related generic
4241 function definitions to solve the optional dependency problem; packages wishing
4242 to share and/or extend functions can avoid depending directly on each other by
4243 moving the function definition to @code{StatsAPI.jl} and each package taking a
4245 (license license:expat)))
4247 (define-public julia-statsbase
4249 (name "julia-statsbase")
4255 (url "https://github.com/JuliaStats/StatsBase.jl")
4256 (commit (string-append "v" version))))
4257 (file-name (git-file-name name version))
4259 (base32 "02y4pm5yvg713a2pn970bbcfkrn2h133rxbxk1da18svhqw3czhi"))))
4260 (build-system julia-build-system)
4262 `(("julia-dataapi" ,julia-dataapi)
4263 ("julia-datastructures" ,julia-datastructures)
4264 ("julia-missings" ,julia-missings)
4265 ("julia-sortingalgorithms" ,julia-sortingalgorithms)
4266 ("julia-statsapi" ,julia-statsapi)))
4268 `(("julia-stablerngs" ,julia-stablerngs)))
4269 (home-page "https://github.com/JuliaStats/StatsBase.jl")
4270 (synopsis "Basic statistics for Julia")
4271 (description "StatsBase.jl is a Julia package that provides basic support
4272 for statistics. Particularly, it implements a variety of statistics-related
4273 functions, such as scalar statistics, high-order moment computation, counting,
4274 ranking, covariances, sampling, and empirical density estimation.")
4275 (license license:expat)))
4277 (define-public julia-stringdistances
4279 (name "julia-stringdistances")
4285 (url "https://github.com/matthieugomez/StringDistances.jl")
4286 (commit (string-append "v" version))))
4287 (file-name (git-file-name name version))
4289 (base32 "0n5707wplbibzhhv1xmshvc025d7xk6mnikclc3hvq5cdc0gy9f7"))))
4290 (build-system julia-build-system)
4292 `(("julia-distances" ,julia-distances)))
4293 (home-page "https://github.com/matthieugomez/StringDistances.jl")
4294 (synopsis "String Distances in Julia")
4295 (description "This package provides string distances in Julia. Distances
4296 are defined for @code{AbstractStrings}, and any iterator that define
4297 @code{length()}. The package also defines Distance \"modifiers\" that can be
4298 applied to any distance.")
4299 (license license:expat)))
4301 (define-public julia-structarrays
4303 (name "julia-structarrays")
4309 (url "https://github.com/JuliaArrays/StructArrays.jl")
4310 (commit (string-append "v" version))))
4311 (file-name (git-file-name name version))
4313 (base32 "0rjcpyjwzg70n87q5r9c5i1qzigavncslxssm3rk5a3y549py56v"))))
4314 (build-system julia-build-system)
4316 `(("julia-dataapi" ,julia-dataapi)
4317 ("julia-staticarrays" ,julia-staticarrays)
4318 ("julia-tables" ,julia-tables)))
4320 `(("julia-documenter" ,julia-documenter)
4321 ("julia-offsetarrays" ,julia-offsetarrays)
4322 ("julia-pooledarrays" ,julia-pooledarrays)
4323 ("julia-typedtables" ,julia-typedtables)
4324 ("julia-weakrefstrings" ,julia-weakrefstrings)))
4325 (home-page "https://github.com/JuliaArrays/StructArrays.jl")
4326 (synopsis "Efficient implementation of struct arrays in Julia")
4327 (description "This package introduces the type @code{StructArray} which is
4328 an @code{AbstractArray} whose elements are @code{struct} (for example
4329 @code{NamedTuples}, or @code{ComplexF64}, or a custom user defined
4330 @code{struct}). While a @code{StructArray} iterates @code{structs}, the layout
4331 is column based (meaning each field of the @code{struct} is stored in a separate
4333 (license license:expat)))
4335 (define-public julia-structtypes
4337 (name "julia-structtypes")
4343 (url "https://github.com/JuliaData/StructTypes.jl")
4344 (commit (string-append "v" version))))
4345 (file-name (git-file-name name version))
4347 (base32 "02mn4kkhn3927dk7945c9bjwlldihydxgn5ilmqqvs8dknvbw8p1"))))
4348 (build-system julia-build-system)
4349 (home-page "https://juliadata.github.io/StructTypes.jl/stable/")
4350 (synopsis "Abstract definitions and convenience methods for Julia objects")
4351 (description "This package provides the @code{StructTypes.StructType} trait
4352 for Julia types to declare the kind of \"struct\" they are, providing
4353 serialization/deserialization packages patterns and strategies to automatically
4354 construct objects.")
4355 (license license:expat)))
4357 (define-public julia-suppressor
4359 (name "julia-suppressor")
4365 (url "https://github.com/JuliaIO/Suppressor.jl")
4366 (commit (string-append "v" version))))
4367 (file-name (git-file-name name version))
4369 (base32 "0v6pxvf8lzrqjc676snvlszh14ridl442g2h6syfjiy75pk7mdyc"))))
4370 (build-system julia-build-system)
4371 (home-page "https://github.com/JuliaIO/Suppressor.jl")
4372 (synopsis "Capture stdout and sterr")
4373 (description "Julia macros for suppressing and/or capturing output (stdout),
4374 warnings (stderr) or both streams at the same time.")
4375 (license license:expat)))
4377 (define-public julia-tableiointerface
4379 (name "julia-tableiointerface")
4385 (url "https://github.com/lungben/TableIOInterface.jl")
4386 (commit (string-append "v" version))))
4387 (file-name (git-file-name name version))
4389 (base32 "0p2fi9jbyfg2j6rysv4if7dx8qw2mssb04i75j1zq607j8707kvn"))))
4390 (build-system julia-build-system)
4391 (home-page "https://github.com/lungben/TableIOInterface.jl")
4392 (synopsis "File formats based on file extensions")
4393 (description "This package determines tabular file formats based on file
4394 extensions. It is intended to be the base both for @code{TableIO.jl} and for
4395 the @code{Pluto.jl} tabular data import functionality.")
4396 (license license:expat)))
4398 (define-public julia-tables
4400 (name "julia-tables")
4406 (url "https://github.com/JuliaData/Tables.jl")
4407 (commit (string-append "v" version))))
4408 (file-name (git-file-name name version))
4410 (base32 "1sqqagzqvav8b1rv5ywwbgy9ixvlmipq95fkwfwn0m8769i8jwzb"))))
4411 (build-system julia-build-system)
4413 `(("julia-dataapi" ,julia-dataapi)
4414 ("julia-datavalueinterfaces" ,julia-datavalueinterfaces)
4415 ("julia-iteratorinterfaceextensions" ,julia-iteratorinterfaceextensions)
4416 ("julia-tabletraits" ,julia-tabletraits)))
4418 `(("julia-datavalues" ,julia-datavalues)
4419 ("julia-queryoperators" ,julia-queryoperators)))
4420 (home-page "https://github.com/JuliaData/Tables.jl")
4421 (synopsis "Interface for tables in Julia")
4422 (description "The @code{Tables.jl} package provides simple, yet powerful
4423 interface functions for working with all kinds tabular data.")
4424 (license license:expat)))
4426 (define-public julia-tableshowutils
4427 ;; The 0.2.5 release is not fully compatable with newer versions of Julia.
4428 (let ((commit "c4e02d8b9bbb31fc81ed6618955e9b1c7cb04460")
4431 (name "julia-tableshowutils")
4437 (url "https://github.com/queryverse/TableShowUtils.jl")
4439 (file-name (git-file-name name version))
4441 (base32 "0gp3hpj3jvzfhkp9r345vfic2j2n2s60729wv38hwn75csp74cg5"))))
4442 (build-system julia-build-system)
4444 `(("julia-datavalues" ,julia-datavalues)
4445 ("julia-json" ,julia-json)))
4446 (home-page "https://github.com/queryverse/TableShowUtils.jl")
4447 (synopsis "Implement show for TableTraits.jl types")
4448 (description "This package provides some common helper functions that make
4449 it easier to implement various @code{Base.show} functions for types that
4450 participate in the @code{TableTraits.jl} ecosystem.")
4451 (license license:expat))))
4453 (define-public julia-tabletraits
4455 (name "julia-tabletraits")
4461 (url "https://github.com/queryverse/TableTraits.jl")
4462 (commit (string-append "v" version))))
4463 (file-name (git-file-name name version))
4465 (base32 "08ssb2630wm6j8f2qa985mn2vfibfm5kjcn4ayl2qkhfcyp8daw4"))))
4466 (build-system julia-build-system)
4468 `(("julia-iteratorinterfaceextensions" ,julia-iteratorinterfaceextensions)))
4469 (home-page "https://github.com/queryverse/TableTraits.jl")
4470 (synopsis "Traits for Julia tables")
4471 (description "TableTraits defines a generic interface for tabular data.")
4472 (license license:expat)))
4474 (define-public julia-tensorcore
4476 (name "julia-tensorcore")
4482 (url "https://github.com/JuliaMath/TensorCore.jl")
4483 (commit (string-append "v" version))))
4484 (file-name (git-file-name name version))
4486 (base32 "1sy3in4a1rl3l2vk0cm9mzg2nkva7syhr7i35si0kbzhkdwpbqjy"))))
4487 (build-system julia-build-system)
4488 (home-page "https://github.com/JuliaMath/TensorCore.jl")
4489 (synopsis "Tensor-algebra definitions")
4490 (description "This package is intended as a lightweight foundation for
4491 tensor operations across the Julia ecosystem. Currently it exports three
4492 operations: @acronym{hadamard, elementwise multiplication}, @acronym{tensor,
4493 product preserves all dimensions}, and @acronym{boxdot, contracts neighboring
4495 (license license:expat)))
4497 (define-public julia-testimages
4499 (name "julia-testimages")
4505 (url "https://github.com/JuliaImages/TestImages.jl")
4506 (commit (string-append "v" version))))
4507 (file-name (git-file-name name version))
4509 (base32 "1lnfsmx33qspyvxw0cykwh7il8xykjpcw1080sisn95ngz2qhdmy"))))
4510 (build-system julia-build-system)
4512 `(#:tests? #f)) ; cycle with ImageMagick.jl
4514 `(("julia-axisarrays" ,julia-axisarrays)
4515 ("julia-colortypes" ,julia-colortypes)
4516 ("julia-fileio" ,julia-fileio)
4517 ("julia-offsetarrays" ,julia-offsetarrays)
4518 ("julia-stringdistances" ,julia-stringdistances)))
4520 ; `(("julia-colors" ,julia-colors)
4521 ; ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
4522 ; ("julia-imagecontrastadjustment" ,julia-imagecontrastadjustment)
4523 ; ("julia-imagemagick" ,julia-imagemagick)
4524 ; ("julia-ometiff" ,julia-ometiff)
4525 ; ("julia-referencetests" ,julia-referencetests)))
4526 (home-page "https://testimages.juliaimages.org/")
4527 (synopsis "Standard test images for Julia")
4528 (description "This package provides a convenient Julia interface for loading
4529 standard named test images and example images for the internal usage in
4530 @code{JuliaImages}. This can be used in conjunction with the @code{Images}
4532 (license license:expat)))
4534 (define-public julia-tracker
4536 (name "julia-tracker")
4542 (url "https://github.com/FluxML/Tracker.jl")
4543 (commit (string-append "v" version))))
4544 (file-name (git-file-name name version))
4546 (base32 "1s4mdywbp7nli7z985fqaj1rs4i6d92b1jx3lhg0qhk1s5wc0v8j"))
4547 (patches (search-patches "julia-tracker-16-compat.patch"))))
4548 (build-system julia-build-system)
4550 `(("julia-adapt" ,julia-adapt)
4551 ("julia-diffrules" ,julia-diffrules)
4552 ("julia-forwarddiff" ,julia-forwarddiff)
4553 ("julia-macrotools" ,julia-macrotools)
4554 ("julia-nanmath" ,julia-nanmath)
4555 ("julia-nnlib" ,julia-nnlib)
4556 ("julia-requires" ,julia-requires)
4557 ("julia-specialfunctions" ,julia-specialfunctions)))
4559 `(("julia-pdmats" ,julia-pdmats)))
4560 (home-page "https://github.com/FluxML/Tracker.jl")
4561 (synopsis "Operator overloading reverse-mode automatic differentiator")
4562 (description "@code{Tracker.jl} previously provided @code{Flux.jl} with
4563 automatic differentiation for its machine learning platform.")
4564 (license license:expat)))
4566 (define-public julia-transcodingstreams
4568 (name "julia-transcodingstreams")
4574 (url "https://github.com/JuliaIO/TranscodingStreams.jl")
4575 (commit (string-append "v" version))))
4576 (file-name (git-file-name name version))
4578 (base32 "1w3klii293caqiclfh28jggv7f53xclm9fr6xmw38brwrn1hjb48"))))
4579 (build-system julia-build-system)
4581 `(#:tests? #f)) ; Circular dependency with various codecs.
4582 (home-page "https://github.com/JuliaIO/TranscodingStreams.jl")
4583 (synopsis "Fast I/O transcoding data streams")
4584 (description "This package provides tools for transcoding data streams
4587 @item fast: small overhead and specialized methods
4588 @item consistent: basic I/O operations work as expected
4589 @item generic: support any I/O objects like files, buffers, pipes, etc.
4590 @item extensible: easy definition for new codec to transcode data
4592 (license license:expat)))
4594 (define-public julia-typedtables
4596 (name "julia-typedtables")
4602 (url "https://github.com/JuliaData/TypedTables.jl")
4603 (commit (string-append "v" version))))
4604 (file-name (git-file-name name version))
4606 (base32 "0nk6zhqvl2r8yhjdhb59kxq0srd3vy4ysg4d8rszj9a43dnn3w3i"))))
4607 (build-system julia-build-system)
4609 `(("julia-adapt" ,julia-adapt)
4610 ("julia-splitapplycombine" ,julia-splitapplycombine)
4611 ("julia-tables" ,julia-tables)))
4612 (home-page "https://github.com/JuliaData/TypedTables.jl")
4613 (synopsis "Column-based storage for data analysis in Julia")
4614 (description "@code{TypedTables.jl} provides two column-based storage
4615 containers: @code{Table} and @code{FlexTable}, both of which represent an array
4616 of @code{NamedTuples}. This package is designed to be lightweight, easy-to-use
4617 and fast, and presents a very minimal new interface to learn.")
4618 (license license:expat)))
4620 (define-public julia-unpack
4622 (name "julia-unpack")
4628 (url "https://github.com/mauro3/UnPack.jl")
4629 (commit (string-append "v" version))))
4630 (file-name (git-file-name name version))
4632 (base32 "066v1px72zidnvhl0rczhh07rcfwvli0jx5nprrgyi1dvj3mps2a"))))
4633 (build-system julia-build-system)
4634 (home-page "https://github.com/mauro3/UnPack.jl")
4635 (synopsis "Pack and Unpack macros for Julia")
4636 (description "The @code{@@unpack} and @code{@@pack!} macros work to unpack
4637 types, modules, and dictionaries.")
4638 (license license:expat)))
4640 (define-public julia-uris
4648 (url "https://github.com/JuliaWeb/URIs.jl")
4649 (commit (string-append "v" version))))
4650 (file-name (git-file-name name version))
4652 (base32 "0kp4hg3kknkm2smlcizqfd33l9x4vkahc2714gnbjp39fj285b92"))))
4653 (build-system julia-build-system)
4655 '(#:julia-package-name "URIs" ;required to run tests
4657 (modify-phases %standard-phases
4658 (add-before 'check 'change-dir
4659 ;; Tests must be run from the testdir
4660 (lambda* (#:key source outputs #:allow-other-keys)
4661 (let ((out (assoc-ref outputs "out")))
4663 (string-append out "/share/julia/packages/URIs/test")))
4665 ;; required for tests
4666 (inputs `(("julia-json" ,julia-json)))
4667 (home-page "https://github.com/JuliaWeb/URIs.jl")
4668 (synopsis "URI parsing in Julia")
4669 (description "@code{URIs.jl} is a Julia package that allows parsing and
4670 working with @acronym{URIs,Uniform Resource Identifiers}, as defined in RFC
4672 (license license:expat)))
4674 (define-public julia-unitful
4676 (name "julia-unitful")
4682 (url "https://github.com/PainterQubits/Unitful.jl")
4683 (commit (string-append "v" version))))
4684 (file-name (git-file-name name version))
4686 (base32 "10qwscd15dnmvx116dwvg99m7kmwgmj5ahdkq7psiq48lcc554gq"))))
4687 (build-system julia-build-system)
4689 `(("julia-constructionbase" ,julia-constructionbase)))
4690 (home-page "https://painterqubits.github.io/Unitful.jl/stable/")
4691 (synopsis "Physical units in Julia")
4692 (description "This package supports SI units and also many other unit
4694 (license license:expat)))
4696 (define-public julia-versionparsing
4698 (name "julia-versionparsing")
4704 (url "https://github.com/JuliaInterop/VersionParsing.jl")
4705 (commit (string-append "v" version))))
4706 (file-name (git-file-name name version))
4708 (base32 "060s72dsnpavgilf7f7315lw2sn4npk8lkndmj6bg7i23hppiwva"))))
4709 (build-system julia-build-system)
4710 (home-page "https://github.com/JuliaInterop/VersionParsing.jl")
4711 (synopsis "Flexible VersionNumber parsing in Julia")
4712 (description "The @code{VersionParsing} package implements flexible parsing
4713 of version-number strings into Julia's built-in @code{VersionNumber} type, via
4714 the @code{vparse(string)} function. Unlike the @code{VersionNumber(string)}
4715 constructor, @code{vparse(string)} can handle version-number strings in a much
4716 wider range of formats than are encompassed by the semver standard. This is
4717 useful in order to support @code{VersionNumber} comparisons applied to
4718 \"foreign\" version numbers from external packages.")
4719 (license license:expat)))
4721 (define-public julia-weakrefstrings
4723 (name "julia-weakrefstrings")
4729 (url "https://github.com/JuliaData/WeakRefStrings.jl")
4730 (commit (string-append "v" version))))
4731 (file-name (git-file-name name version))
4733 (base32 "14h1vdnc3rx87w6v2rr59lgb4kai2hd1wzqpxhmzsi8karg2z219"))))
4734 (build-system julia-build-system)
4736 `(("julia-dataapi" ,julia-dataapi)
4737 ("julia-parsers" ,julia-parsers)))
4738 (home-page "https://github.com/JuliaData/WeakRefStrings.jl")
4739 (synopsis "Efficient string representation and transfer in Julia")
4740 (description "This package provides a minimal String type for Julia that
4741 allows for efficient string representation and transfer")
4742 (license license:expat)))
4744 (define-public julia-woodburymatrices
4746 (name "julia-woodburymatrices")
4752 (url "https://github.com/timholy/WoodburyMatrices.jl")
4753 (commit (string-append "v" version))))
4754 (file-name (git-file-name name version))
4756 (base32 "04yykivi8zrbryxlmb0p5xa6lma8iq22r5s863117dnnqj5gaffd"))))
4757 (build-system julia-build-system)
4758 (home-page "https://github.com/timholy/WoodburyMatrices.jl")
4759 (synopsis "Support for the Woodbury matrix identity for Julia")
4760 (description "This package provides support for the Woodbury matrix identity
4761 for the Julia programming language. This is a generalization of the
4762 Sherman-Morrison formula. Note that the Woodbury matrix identity is notorious
4763 for floating-point roundoff errors, so be prepared for a certain amount of
4764 inaccuracy in the result.")
4765 (license license:expat)))
4767 (define-public julia-zipfile
4769 (name "julia-zipfile")
4775 (url "https://github.com/fhs/ZipFile.jl")
4776 (commit (string-append "v" version))))
4777 (file-name (git-file-name name version))
4780 "15bm3ki5mb9nvqs2byznrryq0bilnjcvsfy3k05hxhk9vapilw7k"))))
4781 (build-system julia-build-system)
4783 `(("julia-zlib-jll" ,julia-zlib-jll)))
4784 (home-page "https://github.com/fhs/ZipFile.jl")
4785 (synopsis "Read/Write ZIP archives in Julia")
4786 (description "This module provides support for reading and writing ZIP
4787 archives in Julia.")
4788 (license license:expat)))
4790 (define-public julia-zygoterules
4792 (name "julia-zygoterules")
4798 (url "https://github.com/FluxML/ZygoteRules.jl")
4799 (commit (string-append "v" version))))
4800 (file-name (git-file-name name version))
4802 (base32 "07i2mf6rr5b8i6l82qgwl5arsb5pwyyzyfasgnszhdqllk9501bs"))))
4803 (build-system julia-build-system)
4805 `(("julia-macrotools" ,julia-macrotools)))
4806 (home-page "https://github.com/FluxML/ZygoteRules.jl")
4807 (synopsis "Add minimal custom gradients to Zygote")
4808 (description "Minimal package which enables to add custom gradients to
4809 Zygote, without depending on Zygote itself.")
4810 (license license:expat)))
4812 (define-public julia-zygote
4814 (name "julia-zygote")
4820 (url "https://github.com/FluxML/Zygote.jl")
4821 (commit (string-append "v" version))))
4822 (file-name (git-file-name name version))
4824 (base32 "1cx66sp30s34ln6p0fpqk1ggjxfxg2gp8791zz3cl85dmk4dl14b"))))
4825 (build-system julia-build-system)
4827 `(#:tests? #f)) ;require CUDA, not packaged yet
4829 `(("julia-abstractffs" ,julia-abstractffts)
4830 ("julia-chainrules" ,julia-chainrules)
4831 ("julia-diffrules" ,julia-diffrules)
4832 ("julia-fillarrays" ,julia-fillarrays)
4833 ("julia-forwarddiff" ,julia-forwarddiff)
4834 ("julia-irtools" ,julia-irtools)
4835 ("julia-macrotools" ,julia-macrotools)
4836 ("julia-nanmath" ,julia-nanmath)
4837 ("julia-requires" ,julia-requires)
4838 ("julia-specialfunctions" ,julia-specialfunctions)
4839 ("julia-zygote-rules" ,julia-zygoterules)))
4840 (home-page "https://fluxml.ai/Zygote.jl")
4841 (synopsis "Automatic differentiation in Julia")
4842 (description "Zygote provides source-to-source automatic
4843 differentiation (AD) in Julia, and is the next-generation AD system for the
4844 Flux differentiable programming framework.")
4845 (license license:expat)))