gnu: julia-chainrulestestutils: Update to 1.2.3.
[jackhill/guix/guix.git] / gnu / packages / julia-xyz.scm
1 ;;; GNU Guix --- Functional package management for GNU
2 ;;; Copyright © 2020, 2021 Nicolò Balzarotti <nicolo@nixo.xyz>
3 ;;; Copyright © 2021 Simon Tournier <zimon.toutoune@gmail.com>
4 ;;; Copyright © 2021 Efraim Flashner <efraim@flashner.co.il>
5 ;;; Copyright © 2021 Vinicius Monego <monego@posteo.net>
6 ;;;
7 ;;; This file is part of GNU Guix.
8 ;;;
9 ;;; GNU Guix is free software; you can redistribute it and/or modify it
10 ;;; under the terms of the GNU General Public License as published by
11 ;;; the Free Software Foundation; either version 3 of the License, or (at
12 ;;; your option) any later version.
13 ;;;
14 ;;; GNU Guix is distributed in the hope that it will be useful, but
15 ;;; WITHOUT ANY WARRANTY; without even the implied warranty of
16 ;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
17 ;;; GNU General Public License for more details.
18 ;;;
19 ;;; You should have received a copy of the GNU General Public License
20 ;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
21
22 (define-module (gnu packages julia-xyz)
23 #:use-module ((guix licenses) #:prefix license:)
24 #:use-module (gnu packages)
25 #:use-module (guix utils)
26 #:use-module (guix packages)
27 #:use-module (guix git-download)
28 #:use-module (guix build-system julia)
29 #:use-module (gnu packages gcc)
30 #:use-module (gnu packages julia-jll)
31 #:use-module (gnu packages python)
32 #:use-module (gnu packages python-xyz)
33 #:use-module (gnu packages version-control))
34
35 (define-public julia-abstractffts
36 (package
37 (name "julia-abstractffts")
38 (version "1.0.1")
39 (source
40 (origin
41 (method git-fetch)
42 (uri (git-reference
43 (url "https://github.com/JuliaMath/AbstractFFTS.jl")
44 (commit (string-append "v" version))))
45 (file-name (git-file-name name version))
46 (sha256
47 (base32 "0083pwdyxjb04i330ir9pc8kmp4bwk59lx1jgc9qi05y8j7xzbp0"))))
48 (build-system julia-build-system)
49 (inputs ;required for tests
50 `(("julia-unitful" ,julia-unitful)))
51 (home-page "https://github.com/JuliaGPU/Adapt.jl")
52 (synopsis "General framework for fast Fourier transforms (FFTs)")
53 (description "This package allows multiple FFT packages to co-exist with
54 the same underlying @code{fft(x)} and @code{plan_fft(x)} interface. It is
55 mainly not intended to be used directly. Instead, developers of packages that
56 implement FFTs (such as @code{FFTW.jl} or @code{FastTransforms.jl}) extend the
57 types/functions defined in AbstractFFTs.")
58 (license license:expat)))
59
60 (define-public julia-abstracttrees
61 (package
62 (name "julia-abstracttrees")
63 (version "0.3.4")
64 (source
65 (origin
66 (method git-fetch)
67 (uri (git-reference
68 (url "https://github.com/JuliaCollections/AbstractTrees.jl")
69 (commit (string-append "v" version))))
70 (file-name (git-file-name name version))
71 (sha256
72 (base32 "16is5n2qa69cci34vfazxsa7ik6q0hbnnqrbrhkq8frh142f1xs8"))))
73 (build-system julia-build-system)
74 (home-page "https://juliacollections.github.io/AbstractTrees.jl/stable/")
75 (synopsis "Abstract Julia interfaces for working with trees")
76 (description "This Julia package provides several utilities for working
77 with tree-like data structures. Most importantly, it defines the
78 @code{children} method that any package that contains such a data structure
79 may import and extend in order to take advantage of any generic tree algorithm
80 in this package.")
81 (license license:expat)))
82
83 (define-public julia-adapt
84 (package
85 (name "julia-adapt")
86 (version "3.3.1")
87 (source
88 (origin
89 (method git-fetch)
90 (uri (git-reference
91 (url "https://github.com/JuliaGPU/Adapt.jl")
92 (commit (string-append "v" version))))
93 (file-name (git-file-name name version))
94 (sha256
95 (base32 "009fj59fzhvfsyw35kakllsh36k3xlwyzq8qa5f5k598i3pq14i7"))))
96 (build-system julia-build-system)
97 (home-page "https://github.com/JuliaGPU/Adapt.jl")
98 (synopsis "Package providing the @code{adapt} function, similar to @code{convert}")
99 (description "This Julia package provides the @code{adapt(T, x)} function
100 acts like @code{convert(T, x)}, but without the restriction of returning a
101 @code{T}. This allows you to \"convert\" wrapper types like @code{Adjoint} to
102 be GPU compatible without throwing away the wrapper.")
103 (license license:expat)))
104
105 (define-public julia-ansicoloredprinters
106 (package
107 (name "julia-ansicoloredprinters")
108 (version "0.0.1")
109 (source
110 (origin
111 (method git-fetch)
112 (uri (git-reference
113 (url "https://github.com/JuliaDocs/ANSIColoredPrinters.jl")
114 (commit (string-append "v" version))))
115 (file-name (git-file-name name version))
116 (sha256
117 (base32 "0dp5agljr0g50s5gn0pr70wrz01ggck6pb40ay3l4szhswq7mqzf"))))
118 (build-system julia-build-system)
119 (home-page "https://github.com/JuliaDocs/ANSIColoredPrinters.jl")
120 (synopsis "ANSI escape code translator")
121 (description "@code{ANSIColoredPrinters.jl} converts a text qualified by
122 ANSI escape codes to another format.")
123 (license license:expat)))
124
125 (define-public julia-aqua
126 (package
127 (name "julia-aqua")
128 (version "0.5.1")
129 (source
130 (origin
131 (method git-fetch)
132 (uri (git-reference
133 (url "https://github.com/JuliaTesting/Aqua.jl")
134 (commit (string-append "v" version))))
135 (file-name (git-file-name name version))
136 (sha256
137 (base32 "1g0kyzcdykgs247j72jpc2qqall696jwgb3hnn4cxmbi8bkf7wpk"))))
138 (build-system julia-build-system)
139 (home-page "https://github.com/JuliaTesting/Aqua.jl")
140 (synopsis "Automated quality assurance for Julia packages")
141 (description "@acronym{Aqua.jl, Auto QUality Assurance for Julia packages},
142 provides functions to run a few automatable checks for Julia packages.")
143 (license license:expat)))
144
145 (define-public julia-arrayinterface
146 (package
147 (name "julia-arrayinterface")
148 (version "3.1.19")
149 (source
150 (origin
151 (method git-fetch)
152 (uri (git-reference
153 (url "https://github.com/JuliaArrays/ArrayInterface.jl")
154 (commit (string-append "v" version))))
155 (file-name (git-file-name name version))
156 (sha256
157 (base32 "0cmldnzvdgmfnrnrzgj6v1mfr2rvk5096392rwmhd3iyx7v0pq33"))))
158 (build-system julia-build-system)
159 (propagated-inputs
160 `(("julia-ifelse" ,julia-ifelse)
161 ("julia-requires" ,julia-requires)
162 ("julia-static" ,julia-static)))
163 (native-inputs
164 `(("julia-aqua" ,julia-aqua)
165 ("julia-bandedmatrices" ,julia-bandedmatrices)
166 ("julia-blockbandedmatrices" ,julia-blockbandedmatrices)
167 ("julia-ifelse" ,julia-ifelse)
168 ("julia-offsetarrays" ,julia-offsetarrays)
169 ("julia-staticarrays" ,julia-staticarrays)))
170 (home-page "https://github.com/JuliaArrays/ArrayInterface.jl")
171 (synopsis "Base array interface primitives")
172 (description "The purpose of this library is to solidify extensions to the
173 current @code{AbstractArray} interface, which are put to use in package
174 ecosystems like @code{DifferentialEquations.jl}. Since these libraries are
175 live, this package will serve as a staging ground for ideas before they are
176 merged into Base Julia. For this reason, no functionality is exported so that
177 if such functions are added and exported in a future Base Julia, there will be
178 no issues with the upgrade.")
179 (license license:expat)))
180
181 (define-public julia-arraylayouts
182 (package
183 (name "julia-arraylayouts")
184 (version "0.7.6")
185 (source
186 (origin
187 (method git-fetch)
188 (uri (git-reference
189 (url "https://github.com/JuliaMatrices/ArrayLayouts.jl")
190 (commit (string-append "v" version))))
191 (file-name (git-file-name name version))
192 (sha256
193 (base32 "05q62pks8j23pgbrfny072rrwzrz6q19l68srnjxxv39ncmdmrvg"))))
194 (build-system julia-build-system)
195 (propagated-inputs
196 `(("julia-fillarrays" ,julia-fillarrays)))
197 (home-page "https://github.com/JuliaMatrices/ArrayLayouts.jl")
198 (synopsis "Array layouts and general fast linear algebra")
199 (description "This package implements a trait-based framework for describing
200 array layouts such as column major, row major, etc. that can be dispatched to
201 appropriate BLAS or optimised Julia linear algebra routines. This supports a
202 much wider class of matrix types than Julia's in-built @code{StridedArray}.")
203 (license license:expat)))
204
205 (define-public julia-axisalgorithms
206 (package
207 (name "julia-axisalgorithms")
208 (version "1.0.0")
209 (source
210 (origin
211 (method git-fetch)
212 (uri (git-reference
213 (url "https://github.com/timholy/AxisAlgorithms.jl")
214 (commit (string-append "v" version))))
215 (file-name (git-file-name name version))
216 (sha256
217 (base32 "00x85lnfln7xkfnirpplzyi8r6q92nfqwya8il156bf7b1pa20gk"))))
218 (build-system julia-build-system)
219 (propagated-inputs
220 `(("julia-woodburymatrices" ,julia-woodburymatrices)))
221 (home-page "https://github.com/timholy/AxisAlgorithms.jl")
222 (synopsis "Filtering and linear algebra routines for multidimensional arrays")
223 (description "@code{AxisAlgorithms} is a collection of filtering and linear
224 algebra algorithms for multidimensional arrays. For algorithms that would
225 typically apply along the columns of a matrix, you can instead pick an arbitrary
226 axis (dimension).")
227 (license license:expat)))
228
229 (define-public julia-axisarrays
230 (package
231 (name "julia-axisarrays")
232 (version "0.4.4")
233 (source
234 (origin
235 (method git-fetch)
236 (uri (git-reference
237 (url "https://github.com/JuliaArrays/AxisArrays.jl")
238 (commit (string-append "v" version))))
239 (file-name (git-file-name name version))
240 (sha256
241 (base32 "03kzan1lm4fxfhzv1xjg3ysf6y7nagcc61vfz15kvdrp1dqxlynk"))))
242 (build-system julia-build-system)
243 (propagated-inputs
244 `(("julia-rangearrays" ,julia-rangearrays)
245 ("julia-intervalsets" ,julia-intervalsets)
246 ("julia-itertools" ,julia-itertools)))
247 (native-inputs
248 `(("julia-offsetarrays" ,julia-offsetarrays)
249 ("julia-unitful" ,julia-unitful)))
250 (home-page "http://juliaarrays.github.io/AxisArrays.jl/latest/")
251 (synopsis "Arrays where each dimension can have a named axis with values")
252 (description "This package for the Julia language provides an array type
253 (the AxisArray) that knows about its dimension names and axis values. This
254 allows for indexing by name without incurring any runtime overhead. This
255 permits one to implement algorithms that are oblivious to the storage order of
256 the underlying arrays. AxisArrays can also be indexed by the values along their
257 axes, allowing column names or interval selections.")
258 (license license:expat)))
259
260 (define-public julia-bandedmatrices
261 (package
262 (name "julia-bandedmatrices")
263 (version "0.16.10")
264 (source
265 (origin
266 (method git-fetch)
267 (uri (git-reference
268 (url "https://github.com/JuliaMatrices/BandedMatrices.jl")
269 (commit (string-append "v" version))))
270 (file-name (git-file-name name version))
271 (sha256
272 (base32 "0rlfj9gr9ss621v5kw5b06206yaak21s2vq9vk7r8a7p2ylncism"))))
273 (build-system julia-build-system)
274 (propagated-inputs
275 `(("julia-arraylayouts" ,julia-arraylayouts)
276 ("julia-fillarrays" ,julia-fillarrays)))
277 (native-inputs
278 `(("julia-genericlinearalgebra" ,julia-genericlinearalgebra)))
279 (home-page "https://github.com/JuliaMatrices/BandedMatrices.jl")
280 (synopsis "Julia package for representing banded matrices")
281 (description "This package supports representing banded matrices by only
282 the entries on the bands.")
283 (license license:expat)))
284
285 (define-public julia-benchmarktools
286 (package
287 (name "julia-benchmarktools")
288 (version "1.1.1")
289 (source
290 (origin
291 (method git-fetch)
292 (uri (git-reference
293 (url "https://github.com/JuliaCI/BenchmarkTools.jl")
294 (commit (string-append "v" version))))
295 (file-name (git-file-name name version))
296 (sha256
297 (base32 "1xz3kdrphp4b158pg7dwkiry49phs2fjjpdvk1hjpww5ykxacks8"))))
298 (build-system julia-build-system)
299 (propagated-inputs `(("julia-json" ,julia-json)))
300 (home-page "https://github.com/JuliaCI/BenchmarkTools.jl")
301 (synopsis "Benchmarking framework for the Julia language")
302 (description "@code{BenchmarkTools.jl} makes performance tracking of Julia
303 code easy by supplying a framework for writing and running groups of
304 benchmarks as well as comparing benchmark results.")
305 (license license:expat)))
306
307 (define-public julia-blockarrays
308 (package
309 (name "julia-blockarrays")
310 (version "0.16.8")
311 (source
312 (origin
313 (method git-fetch)
314 (uri (git-reference
315 (url "https://github.com/JuliaArrays/BlockArrays.jl")
316 (commit (string-append "v" version))))
317 (file-name (git-file-name name version))
318 (sha256
319 (base32 "1by26036fk9mawmcgqxpwizgbs398v9p6vrbsgg7h6llqn3q9iw1"))))
320 (build-system julia-build-system)
321 (propagated-inputs
322 `(("julia-arraylayouts" ,julia-arraylayouts)
323 ("julia-fillarrays" ,julia-fillarrays)))
324 (native-inputs
325 `(("julia-lazyarrays" ,julia-lazyarrays)
326 ("julia-offsetarrays" ,julia-offsetarrays)
327 ("julia-staticarrays" ,julia-staticarrays)))
328 (home-page "https://github.com/JuliaArrays/BlockArrays.jl")
329 (synopsis "BlockArrays for Julia")
330 (description "A block array is a partition of an array into blocks or
331 subarrays. This package has two purposes. Firstly, it defines an interface for
332 an @code{AbstractBlockArray} block arrays that can be shared among types
333 representing different types of block arrays. The advantage to this is that it
334 provides a consistent API for block arrays.
335 Secondly, it also implements two different type of block arrays that follow the
336 @code{AbstractBlockArray} interface. The type @code{BlockArray} stores each
337 block contiguously while the type @code{PseudoBlockArray} stores the full matrix
338 contiguously. This means that @code{BlockArray} supports fast non copying
339 extraction and insertion of blocks while @code{PseudoBlockArray} supports fast
340 access to the full matrix to use in in for example a linear solver.")
341 (license license:expat)))
342
343 (define-public julia-blockbandedmatrices
344 (package
345 (name "julia-blockbandedmatrices")
346 (version "0.10.7")
347 (source
348 (origin
349 (method git-fetch)
350 (uri (git-reference
351 (url "https://github.com/JuliaMatrices/BlockBandedMatrices.jl")
352 (commit (string-append "v" version))))
353 (file-name (git-file-name name version))
354 (sha256
355 (base32 "10n1r6kmmv2wa307jfg9y2m6p16j8hngjp3fjavpbdy1r5haasm9"))))
356 (build-system julia-build-system)
357 (propagated-inputs
358 `(("julia-arraylayouts" ,julia-arraylayouts)
359 ("julia-bandedmatrices" ,julia-bandedmatrices)
360 ("julia-blockarrays" ,julia-blockarrays)
361 ("julia-fillarrays" ,julia-fillarrays)
362 ("julia-matrixfactorizations" ,julia-matrixfactorizations)))
363 (home-page "https://github.com/JuliaMatrices/BlockBandedMatrices.jl")
364 (synopsis "Block-banded matrices and banded-block-banded matrices")
365 (description "This package supports representing block-banded and
366 banded-block-banded matrices by only storing the entries in the non-zero bands.
367 A @code{BlockBandedMatrix} is a subtype of @code{BlockMatrix} of
368 @code{BlockArrays.jl} whose layout of non-zero blocks is banded.")
369 (license license:expat)))
370
371 (define-public julia-bufferedstreams
372 (package
373 (name "julia-bufferedstreams")
374 (version "1.0.0")
375 (source
376 (origin
377 (method git-fetch)
378 (uri (git-reference
379 (url "https://github.com/BioJulia/BufferedStreams.jl")
380 (commit (string-append "v" version))))
381 (file-name (git-file-name name version))
382 (sha256
383 (base32 "0sf4sxbq55mg2pwxyxf0c839z1lk0yxg8nmb7617bfbvw31cp88z"))))
384 (build-system julia-build-system)
385 ;; The package is old and tests are using undefined functions. They also
386 ;; freeze, see
387 ;; https://travis-ci.org/BioJulia/BufferedStreams.jl/jobs/491050182
388 (arguments
389 '(#:tests? #f
390 #:julia-package-name "BufferedStreams"))
391 (propagated-inputs `(("julia-compat" ,julia-compat)))
392 (home-page "https://github.com/BioJulia/BufferedStreams.jl")
393 (synopsis "Fast composable IO streams")
394 (description "@code{BufferedStreams.jl} provides buffering for IO
395 operations. It can wrap any @code{IO} type automatically making incremental
396 reading and writing faster.")
397 (license license:expat)))
398
399 (define-public julia-calculus
400 (package
401 (name "julia-calculus")
402 (version "0.5.1")
403 (source
404 (origin
405 (method git-fetch)
406 (uri (git-reference
407 (url "https://github.com/JuliaMath/Calculus.jl")
408 (commit (string-append "v" version))))
409 (file-name (git-file-name name version))
410 (sha256
411 (base32 "0xh0ak2ycsjw2h86ja24ch3kn2d18zx3frrds78aimwdnqb1gdc2"))))
412 (build-system julia-build-system)
413 (home-page "https://github.com/JuliaMath/Calculus.jl")
414 (synopsis "Common utilities for automatic differentiation")
415 (description "This package provides tools for working with the basic
416 calculus operations of differentiation and integration. The @code{Calculus}
417 package produces approximate derivatives by several forms of finite
418 differencing or produces exact derivative using symbolic differentiation. It
419 can also be used to compute definite integrals by different numerical
420 methods.")
421 (license license:expat)))
422
423 (define-public julia-categoricalarrays
424 (package
425 (name "julia-categoricalarrays")
426 (version "0.9.7")
427 (source
428 (origin
429 (method git-fetch)
430 (uri (git-reference
431 (url "https://github.com/JuliaData/CategoricalArrays.jl")
432 (commit (string-append "v" version))))
433 (file-name (git-file-name name version))
434 (sha256
435 (base32 "1bcfylxdaizgasnmlkjjkf4dgfvy2y9ycnphw2d0z6mm9vx3n04x"))))
436 (build-system julia-build-system)
437 (native-inputs
438 `(("julia-pooledarrays" ,julia-pooledarrays)))
439 (propagated-inputs
440 `(("julia-dataapi" ,julia-dataapi)
441 ("julia-json" ,julia-json)
442 ("julia-json3" ,julia-json3)
443 ("julia-missings" ,julia-missings)
444 ("julia-recipesbase" ,julia-recipesbase)
445 ("julia-structtypes" ,julia-structtypes)))
446 (home-page "https://github.com/JuliaData/CategoricalArrays.jl")
447 (synopsis "Arrays for working with categorical data")
448 (description "This package provides tools for working with categorical
449 variables, both with unordered (nominal variables) and ordered categories
450 (ordinal variables), optionally with missing values.")
451 (license license:expat)))
452
453 (define-public julia-chainrules
454 (package
455 (name "julia-chainrules")
456 (version "1.1.0")
457 (source
458 (origin
459 (method git-fetch)
460 (uri (git-reference
461 (url "https://github.com/JuliaDiff/ChainRules.jl")
462 (commit (string-append "v" version))))
463 (file-name (git-file-name name version))
464 (sha256
465 (base32 "0if93pd3b3scg2x3gmk1cbwjk0ax1n792vy8c38y3xl7jpd5cb70"))))
466 (build-system julia-build-system)
467 (inputs ;required for test
468 `(("julia-chainrulestestutils" ,julia-chainrulestestutils)
469 ("julia-finitedifferences" ,julia-finitedifferences)
470 ("julia-nanmath" ,julia-nanmath)
471 ("julia-specialfunctions" ,julia-specialfunctions)))
472 (propagated-inputs
473 `(("julia-chainrulescore" ,julia-chainrulescore)
474 ("julia-compat" ,julia-compat)
475 ("julia-reexport" ,julia-reexport)
476 ("julia-requires" ,julia-requires)))
477 (home-page "https://github.com/JuliaDiff/ChainRules.jl")
478 (synopsis "Common utilities for automatic differentiation")
479 (description "The is package provides a variety of common utilities that
480 can be used by downstream automatic differentiation (AD) tools to define and
481 execute forward-, reverse-, and mixed-mode primitives.")
482 (license license:expat)))
483
484 (define-public julia-chainrulescore
485 (package
486 (name "julia-chainrulescore")
487 (version "1.0.2")
488 (source
489 (origin
490 (method git-fetch)
491 (uri (git-reference
492 (url "https://github.com/JuliaDiff/ChainRulesCore.jl")
493 (commit (string-append "v" version))))
494 (file-name (git-file-name name version))
495 (sha256
496 (base32 "1866xv30h1bi7f2m993nljzf58wwmv8zlgn6ffn9j3wckch1nfpb"))))
497 (build-system julia-build-system)
498 (inputs ;required for tests
499 `(("julia-benchmarktools" ,julia-benchmarktools)
500 ("julia-staticarrays" ,julia-staticarrays)))
501 (propagated-inputs
502 `(("julia-compat" ,julia-compat)))
503 (home-page "https://github.com/JuliaDiff/ChainRulesCore.jl")
504 (synopsis "Common utilities used by downstream automatic differentiation tools")
505 (description "The package provides a light-weight dependency for defining
506 sensitivities for functions without the need to depend on ChainRules itself.")
507 (license license:expat)))
508
509 (define-public julia-chainrulestestutils
510 (package
511 (name "julia-chainrulestestutils")
512 (version "1.2.3")
513 (source
514 (origin
515 (method git-fetch)
516 (uri (git-reference
517 (url "https://github.com/JuliaDiff/ChainRulesTestUtils.jl")
518 (commit (string-append "v" version))))
519 (file-name (git-file-name name version))
520 (sha256
521 (base32 "1vlkyp72d514gyb4k3yhjl1g7f24ncmz61j56p4sdi9f76rk9fx9"))))
522 (build-system julia-build-system)
523 (propagated-inputs
524 `(("julia-chainrulescore" ,julia-chainrulescore)
525 ("julia-compat" ,julia-compat)
526 ("julia-finitedifference" ,julia-finitedifferences)))
527 (home-page "https://github.com/JuliaDiff/ChainRulesTestUtils.jl")
528 (synopsis "Common utilities used by downstream automatic differentiation tools")
529 (description "This package is designed to help in testing
530 @code{ChainRulesCore.frule} and @code{ChainRulesCore.rrule} methods. The main
531 entry points are @code{ChainRulesTestUtils.frule_test},
532 @code{ChainRulesTestUtils.rrule_test}, and
533 @code{ChainRulesTestUtils.test_scalar}. Currently this is done via testing the
534 rules against numerical differentiation (using @code{FiniteDifferences.jl}).
535
536 @code{ChainRulesTestUtils.jl} is separated from @code{ChainRulesCore.jl} so that it
537 can be a test-only dependency, allowing it to have potentially heavy
538 dependencies, while keeping @code{ChainRulesCore.jl} as light-weight as possible.")
539 (license license:expat)))
540
541 (define-public julia-colors
542 (package
543 (name "julia-colors")
544 (version "0.12.8")
545 (source
546 (origin
547 (method git-fetch)
548 (uri (git-reference
549 (url "https://github.com/JuliaGraphics/Colors.jl")
550 (commit (string-append "v" version))))
551 (file-name (git-file-name name version))
552 (sha256
553 (base32 "0kx3hq7rf8p5zx6ly9k5j90zijmc7yrwmy96cgkl2ibdfbnhmya3"))))
554 (build-system julia-build-system)
555 (propagated-inputs
556 `(("julia-colortypes" ,julia-colortypes)
557 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
558 ("julia-reexport" ,julia-reexport)))
559 (home-page "https://github.com/JuliaGraphics/Colors.jl")
560 (synopsis "Tools for dealing with color")
561 (description "This package provides a wide array of functions for dealing
562 with color. This includes conversion between colorspaces, measuring distance
563 between colors, simulating color blindness, parsing colors, and generating
564 color scales for graphics.")
565 (license license:expat)))
566
567 (define-public julia-colorschemes
568 (package
569 (name "julia-colorschemes")
570 (version "3.15.0")
571 (source
572 (origin
573 (method git-fetch)
574 (uri (git-reference
575 (url "https://github.com/JuliaGraphics/ColorSchemes.jl")
576 (commit (string-append "v" version))))
577 (file-name (git-file-name name version))
578 (sha256
579 (base32 "0kpjhmqd5cj8dh8bmh9b5g6bscyp7h23hzpr2s93pnrp57q1wvhq"))))
580 (build-system julia-build-system)
581 (propagated-inputs
582 `(("julia-colors" ,julia-colors)
583 ("julia-colortypes" ,julia-colortypes)
584 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
585 ("julia-staticarrays" ,julia-staticarrays)))
586 (home-page "https://github.com/JuliaGraphics/ColorSchemes.jl")
587 (synopsis "Colorschemes, colormaps, gradients, and palettes")
588 (description "This package provides a collection of colorschemes.")
589 (license license:expat)))
590
591 (define-public julia-colortypes
592 (package
593 (name "julia-colortypes")
594 (version "0.11.0")
595 (source
596 (origin
597 (method git-fetch)
598 (uri (git-reference
599 (url "https://github.com/JuliaGraphics/ColorTypes.jl")
600 (commit (string-append "v" version))))
601 (file-name (git-file-name name version))
602 (sha256
603 (base32 "0n7h70caqv7yd0khjhn90iax62r73mcif8qzkwj5b4q46li1r8ih"))))
604 (arguments
605 '(#:tests? #f)) ;require Documenter, not packaged yet
606 (build-system julia-build-system)
607 (propagated-inputs
608 `(("julia-fixedpointnumbers" ,julia-fixedpointnumbers)))
609 (home-page "https://github.com/JuliaGraphics/ColorTypes.jl")
610 (synopsis "Basic color types and constructor")
611 (description "This minimalistic package serves as the foundation for
612 working with colors in Julia. It defines basic color types and their
613 constructors, and sets up traits and show methods to make them easier to work
614 with.")
615 (license license:expat)))
616
617 (define-public julia-colorvectorspace
618 (package
619 (name "julia-colorvectorspace")
620 (version "0.9.7")
621 (source
622 (origin
623 (method git-fetch)
624 (uri (git-reference
625 (url "https://github.com/JuliaGraphics/ColorVectorSpace.jl")
626 (commit (string-append "v" version))))
627 (file-name (git-file-name name version))
628 (sha256
629 (base32 "02gk7f5g5wjxdasbjf8bvv1m7clksh7mw1xmygjdirjz1q0d6dwi"))))
630 (build-system julia-build-system)
631 (propagated-inputs
632 `(("julia-colortypes" ,julia-colortypes)
633 ("julia-specialfunctions" ,julia-specialfunctions)
634 ("julia-tensorcore" ,julia-tensorcore)))
635 (native-inputs
636 `(("julia-colors" ,julia-colors)))
637 (home-page "https://github.com/JuliaGraphics/ColorVectorSpace.jl")
638 (synopsis "Treat colors as n-vectors for the purposes of arithmetic")
639 (description "This package is an add-on to @code{ColorTypes.jl} and provides
640 fast mathematical operations for objects with types such as RGB and Gray.
641 Specifically, with this package both grayscale and RGB colors are treated as if
642 they are points in a normed vector space.")
643 (license license:expat)))
644
645 (define-public julia-combinatorics
646 (package
647 (name "julia-combinatorics")
648 (version "1.0.2")
649 (source
650 (origin
651 (method git-fetch)
652 (uri (git-reference
653 (url "https://github.com/JuliaMath/Combinatorics.jl")
654 (commit (string-append "v" version))))
655 (file-name (git-file-name name version))
656 (sha256
657 (base32 "0gafqkqi874zfm9h99akw9q95lk3ih5gip2h8p12fj9h7rvyf4j5"))))
658 (build-system julia-build-system)
659 (home-page "https://github.com/JuliaMath/Combinatorics.jl")
660 (synopsis "Combinatorics library for Julia")
661 (description "This package provides a combinatorics library for Julia,
662 focusing mostly (as of now) on enumerative combinatorics and permutations.")
663 (license license:expat)))
664
665 (define-public julia-commonsubexpressions
666 (package
667 (name "julia-commonsubexpressions")
668 (version "0.3.0")
669 (source
670 (origin
671 (method git-fetch)
672 (uri (git-reference
673 (url "https://github.com/rdeits/CommonSubexpressions.jl")
674 (commit (string-append "v" version))))
675 (file-name (git-file-name name version))
676 (sha256
677 (base32 "0mgy90kk8ksv3l720kkk04gnhn4aqhh2dj4sp3x8yy3limngfjay"))))
678 (build-system julia-build-system)
679 (propagated-inputs
680 `(("julia-macrotools" ,julia-macrotools)))
681 (home-page "https://github.com/rdeits/CommonSubexpressions.jl")
682 (synopsis "@code{@@cse} macro for Julia")
683 (description "This package provides the @code{@@cse} macro, which performs
684 common subexpression elimination.")
685 (license license:expat)))
686
687 (define-public julia-compat
688 (package
689 (name "julia-compat")
690 (version "3.39.0")
691 (source
692 (origin
693 (method git-fetch)
694 (uri (git-reference
695 (url "https://github.com/JuliaLang/Compat.jl")
696 (commit (string-append "v" version))))
697 (file-name (git-file-name name version))
698 (sha256
699 (base32 "0qzvaqi5gqgc747fnajbvvf5vqbh6cwykwky00c7glvmvdsgk3z0"))))
700 (build-system julia-build-system)
701 (home-page "https://github.com/JuliaLang/Compat.jl")
702 (synopsis "Compatibility across Julia versions")
703 (description "The Compat package is designed to ease interoperability
704 between older and newer versions of the Julia language. The Compat package
705 provides a macro that lets you use the latest syntax in a backwards-compatible
706 way.")
707 (license license:expat)))
708
709 (define-public julia-constructionbase
710 (package
711 (name "julia-constructionbase")
712 (version "1.3.0")
713 (source
714 (origin
715 (method git-fetch)
716 (uri (git-reference
717 (url "https://github.com/JuliaObjects/ConstructionBase.jl")
718 (commit (string-append "v" version))))
719 (file-name (git-file-name name version))
720 (sha256
721 (base32 "1jk3h446vkv4yaavgm1hf1az7cwhppvhklvr08s49hhg02cm750q"))))
722 (build-system julia-build-system)
723 (home-page "https://juliaobjects.github.io/ConstructionBase.jl/dev/")
724 (synopsis "Primitive functions for construction of objects")
725 (description "This very lightweight package provides primitive functions
726 for construction of objects.")
727 (license license:expat)))
728
729 (define-public julia-coordinatetransformations
730 (package
731 (name "julia-coordinatetransformations")
732 (version "0.6.1")
733 (source
734 (origin
735 (method git-fetch)
736 (uri (git-reference
737 (url "https://github.com/JuliaGeometry/CoordinateTransformations.jl")
738 (commit (string-append "v" version))))
739 (file-name (git-file-name name version))
740 (sha256
741 (base32 "15zbkn32v7xlz7559s0r5a0vkwmjwsswxaqpzijly4lky4jnp33d"))))
742 (build-system julia-build-system)
743 (arguments
744 `(#:tests? #f)) ; Documenter.jl not packaged yet.
745 (propagated-inputs
746 `(("julia-staticarrays" ,julia-staticarrays)))
747 ;(native-inputs
748 ; `(("julia-documenter" ,julia-documenter)
749 ; ("julia-forwarddiff" ,julia-forwarddiff)
750 ; ("julia-unitful" ,julia-unitful)))
751 (home-page "https://github.com/JuliaGeometry/CoordinateTransformations.jl")
752 (synopsis "Coordinate transformations in Julia")
753 (description "@code{CoordinateTransformations} is a Julia package to manage
754 simple or complex networks of coordinate system transformations.
755 Transformations can be easily applied, inverted, composed, and differentiated
756 (both with respect to the input coordinates and with respect to transformation
757 parameters such as rotation angle). Transformations are designed to be
758 light-weight and efficient enough for, e.g., real-time graphical applications,
759 while support for both explicit and automatic differentiation makes it easy to
760 perform optimization and therefore ideal for computer vision applications such
761 as SLAM (simultaneous localization and mapping).")
762 (license license:expat)))
763
764 (define-public julia-crayons
765 (package
766 (name "julia-crayons")
767 (version "4.0.4")
768 (source
769 (origin
770 (method git-fetch)
771 (uri (git-reference
772 (url "https://github.com/KristofferC/Crayons.jl")
773 (commit (string-append "v" version))))
774 (file-name (git-file-name name version))
775 (sha256
776 (base32 "0v3zhjlnb2914bxcj4myl8pgb7m31p77aj2k1bckmqs96jdph10z"))))
777 (build-system julia-build-system)
778 (home-page "https://github.com/KristofferC/Crayons.jl")
779 (synopsis "Colored and styled strings for terminals")
780 (description "Crayons is a package that makes it simple to write strings in
781 different colors and styles to terminals. It supports the 16 system colors,
782 both the 256 color and 24 bit true color extensions, and the different text
783 styles available to terminals.")
784 (license license:expat)))
785
786 (define-public julia-dataapi
787 (package
788 (name "julia-dataapi")
789 (version "1.7.0")
790 (source
791 (origin
792 (method git-fetch)
793 (uri (git-reference
794 (url "https://github.com/JuliaData/DataAPI.jl")
795 (commit (string-append "v" version))))
796 (file-name (git-file-name name version))
797 (sha256
798 (base32 "0swk31p83fycz5cdj4fg6b0wfqj473lnx94q2fl7ybxkkc6afba7"))))
799 (build-system julia-build-system)
800 (home-page "https://github.com/JuliaData/DataAPI.jl")
801 (synopsis "Data-focused namespace for packages to share functions")
802 (description "This package provides a namespace for data-related generic
803 function definitions to solve the optional dependency problem; packages wishing
804 to share and/or extend functions can avoid depending directly on each other by
805 moving the function definition to DataAPI.jl and each package taking a
806 dependency on it.")
807 (license license:expat)))
808
809 (define-public julia-datastructures
810 (package
811 (name "julia-datastructures")
812 (version "0.18.9")
813 (source
814 (origin
815 (method git-fetch)
816 (uri (git-reference
817 (url "https://github.com/JuliaCollections/DataStructures.jl")
818 (commit (string-append "v" version))))
819 (file-name (git-file-name name version))
820 (sha256
821 (base32 "0hdqp8ipsqdw5bqqkdvz4j6n67x80sj5azr9vzyxwjfsgkfbnk2l"))))
822 (propagated-inputs
823 `(("julia-compat" ,julia-compat)
824 ("julia-orderedcollections" ,julia-orderedcollections)))
825 (build-system julia-build-system)
826 (home-page "https://github.com/JuliaCollections/DataStructures.jl")
827 (synopsis "Julia module providing different data structures")
828 (description "This package implements a variety of data structures,
829 including, @code{CircularBuffer}, @code{Queue}, @code{Stack},
830 @code{Accumulators}, @code{LinkedLists}, @code{SortedDicts} and many others.")
831 (license license:expat)))
832
833 (define-public julia-datavalueinterfaces
834 (package
835 (name "julia-datavalueinterfaces")
836 (version "1.0.0")
837 (source
838 (origin
839 (method git-fetch)
840 (uri (git-reference
841 (url "https://github.com/queryverse/DataValueInterfaces.jl")
842 (commit (string-append "v" version))))
843 (file-name (git-file-name name version))
844 (sha256
845 (base32 "0g2wj6q7jj956nx6g7dk8x7w1c4l2xcmnr1kq5x8s8fild9kslg8"))))
846 (build-system julia-build-system)
847 (home-page "https://github.com/queryverse/DataValueInterfaces.jl")
848 (synopsis "Interface for DataValues.jl")
849 (description "This package allows a few \"forward\" definitions for the
850 @code{DataValues.jl} package that other packages can utilize for integration
851 without having to take direct dependencies.")
852 (license license:expat)))
853
854 (define-public julia-datavalues
855 (package
856 (name "julia-datavalues")
857 (version "0.4.13")
858 (source
859 (origin
860 (method git-fetch)
861 (uri (git-reference
862 (url "https://github.com/queryverse/DataValues.jl")
863 (commit (string-append "v" version))))
864 (file-name (git-file-name name version))
865 (sha256
866 (base32 "15j3hrqq6nazn533bfsvg32xznacbzsl303j1qs48av59ppnvhhv"))))
867 (build-system julia-build-system)
868 (arguments
869 `(#:tests? #f ; Tests need upgrading with newer Julia version.
870 #:phases
871 (modify-phases %standard-phases
872 (add-after 'unpack 'skip-known-failing-tests
873 (lambda _
874 ;; See upstream report:
875 ;; https://github.com/queryverse/DataValues.jl/issues/83
876 (substitute* "test/array/test_reduce.jl"
877 ((".*DataValue\\(mapreduce.*") "")
878 ((".*DataValue\\(method\\(f.*") ""))
879 #t)))))
880 (propagated-inputs
881 `(("julia-datavalueinterfaces" ,julia-datavalueinterfaces)))
882 (home-page "https://github.com/queryverse/DataValues.jl")
883 (synopsis "Missing values for Julia")
884 (description "This package provides the type @code{DataValue} that is used
885 to represent missing data.")
886 (license license:expat)))
887
888 (define-public julia-deepdiffs
889 (package
890 (name "julia-deepdiffs")
891 (version "1.2.0")
892 (source
893 (origin
894 (method git-fetch)
895 (uri (git-reference
896 (url "https://github.com/ssfrr/DeepDiffs.jl")
897 (commit (string-append "v" version))))
898 (file-name (git-file-name name version))
899 (sha256
900 (base32 "1gsbxb1d67g05h5bvzz3swdfih6404jrydy724a8dvbdgqvm3sds"))))
901 (build-system julia-build-system)
902 (home-page "https://github.com/ssfrr/DeepDiffs.jl")
903 (synopsis "Compute and pretty-print diffs for data structures")
904 (description "@code{DeepDiffs.jl} provides the @code{deepdiff} function,
905 which finds and displays differences (diffs) between Julia data structures. It
906 supports @code{Vectors}, @code{Dicts}, and @code{String}s. When diffing
907 dictionaries where values associated with a particular key may change,
908 @code{deepdiff} will recurse into value to provide a more detailed diff.")
909 (license license:expat)))
910
911 (define-public julia-dictionaries
912 (package
913 (name "julia-dictionaries")
914 (version "0.3.10")
915 (source
916 (origin
917 (method git-fetch)
918 (uri (git-reference
919 (url "https://github.com/andyferris/Dictionaries.jl")
920 (commit (string-append "v" version))))
921 (file-name (git-file-name name version))
922 (sha256
923 (base32 "1mm43hm8hd6sgmkkpqhbqhvap7mpkjwzmz5algxi6manp580gkr5"))))
924 (build-system julia-build-system)
925 (propagated-inputs
926 `(("julia-indexing" ,julia-indexing)))
927 (home-page "https://github.com/andyferris/Dictionaries.jl")
928 (synopsis "Alternative interface for dictionaries in Julia")
929 (description "This package provides an alternative interface for
930 dictionaries in Julia, for improved productivity and performance.")
931 (license license:expat)))
932
933 (define-public julia-distances
934 (package
935 (name "julia-distances")
936 (version "0.10.3")
937 (source
938 (origin
939 (method git-fetch)
940 (uri (git-reference
941 (url "https://github.com/JuliaStats/Distances.jl")
942 (commit (string-append "v" version))))
943 (file-name (git-file-name name version))
944 (sha256
945 (base32 "1yqd9wg4z15k42mrp4y14j2x0sq7yrjhm5zpqklrw6w6j1c367ig"))))
946 (build-system julia-build-system)
947 (arguments
948 `(#:phases
949 (modify-phases %standard-phases
950 (add-after 'unpack 'skip-flakey-tests
951 (lambda _
952 ;; Some combination of these tests fail nondeterministically
953 ;; each of the times this package is built.
954 (substitute* "test/test_dists.jl"
955 (("test dyz ≥") "test_nowarn dyz ≥")
956 (("test dist\\(y, x") "test_nowarn dist(y, x")
957 (("test dist\\(z, x") "test_nowarn dist(z, x")
958 (("test dist\\(z, y") "test_nowarn dist(z, y")))))))
959 (propagated-inputs
960 `(("julia-statsapi" ,julia-statsapi)))
961 (native-inputs
962 `(("julia-offsetarrays" ,julia-offsetarrays)
963 ("julia-unitful" ,julia-unitful)))
964 (home-page "https://github.com/JuliaStats/Distances.jl")
965 (synopsis "Julia package for evaluating distances (metrics) between vectors")
966 (description "A Julia package for evaluating distances(metrics) between
967 vectors. This package also provides optimized functions to compute column-wise
968 and pairwise distances, which are often substantially faster than a
969 straightforward loop implementation.")
970 (license license:expat)))
971
972 (define-public julia-docstringextensions
973 (package
974 (name "julia-docstringextensions")
975 (version "0.8.5")
976 (source
977 (origin
978 (method git-fetch)
979 (uri (git-reference
980 (url "https://github.com/JuliaDocs/DocStringExtensions.jl")
981 (commit (string-append "v" version))))
982 (file-name (git-file-name name version))
983 (sha256
984 (base32 "0fy4kfnfacyfmlly6nqxn77dk2gqw80b69zb4m1i0i39zv3cpqfb"))))
985 (build-system julia-build-system)
986 (arguments
987 `(#:tests? #f)) ; Tests try to read SSL certificates.
988 (home-page "https://juliadocs.github.io/DocStringExtensions.jl/latest/")
989 (synopsis "Extensions for Julia's docsystem")
990 (description "This package provides a collection of useful extensions for
991 Julia's built-in docsystem. These are features that are not yet mature enough
992 to be considered for inclusion in Base, or that have sufficiently niche use
993 cases that including them with the default Julia installation is not seen as
994 valuable enough at this time.")
995 (license license:expat)))
996
997 ;; By removing all the javascript and css downloads any HTML documentation
998 ;; produced by this package will not be very useful.
999 (define-public julia-documenter
1000 (package
1001 (name "julia-documenter")
1002 (version "0.27.7")
1003 (source
1004 (origin
1005 (method git-fetch)
1006 (uri (git-reference
1007 (url "https://github.com/JuliaDocs/Documenter.jl")
1008 (commit (string-append "v" version))))
1009 (file-name (git-file-name name version))
1010 (sha256
1011 (base32 "00ai3c24i3fkn5plmavampcxm0ijhwk0v5cn9xwm7rvbjnnvaaam"))))
1012 (build-system julia-build-system)
1013 (arguments
1014 `(#:phases
1015 (modify-phases %standard-phases
1016 (add-after 'unpack 'patch-source
1017 (lambda* (#:key inputs #:allow-other-keys)
1018 (substitute* "src/Deps.jl"
1019 (("pip install")
1020 (string-append (assoc-ref inputs "python")
1021 "/bin/pip install")))
1022 #t))
1023 (add-after 'unpack 'remove-javascript-downloads
1024 (lambda _
1025 (substitute* "src/Writers/HTMLWriter.jl"
1026 (("cdnjs.cloudflare.com") "example.com"))
1027 ;; Removing the javascript downloads causes these tests fail.
1028 (substitute* "test/examples/tests.jl"
1029 ((".*Main\\.examples_html_doc.*") "")
1030 ((".*Main\\.examples_html_mathjax3_doc.*") ""))
1031 #t)))))
1032 (propagated-inputs
1033 `(("julia-ansicoloredprinters" ,julia-ansicoloredprinters)
1034 ("julia-docstringextensions" ,julia-docstringextensions)
1035 ("julia-iocapture" ,julia-iocapture)
1036 ("julia-json" ,julia-json)))
1037 (inputs
1038 `(("python" ,python-wrapper)))
1039 (native-inputs
1040 `(("git" ,git-minimal)
1041 ("julia-documentermarkdown" ,julia-documentermarkdown)
1042 ("julia-documentertools" ,julia-documentertools)))
1043 (home-page "https://juliadocs.github.io/Documenter.jl")
1044 (synopsis "Documentation generator for Julia")
1045 (description "This package provides a documentation generator for Julia.")
1046 (license license:expat)))
1047
1048 (define julia-documenter-bootstrap
1049 (package
1050 (inherit julia-documenter)
1051 (name "julia-documenter-bootstrap")
1052 (arguments
1053 (substitute-keyword-arguments (package-arguments julia-documenter)
1054 ((#:phases phases)
1055 `(modify-phases ,phases
1056 (delete 'patch-source)))
1057 ;; Not all dependencies available in bootstrap version.
1058 ((#:tests? _ #f) #f)))
1059 (inputs `())
1060 (native-inputs `())))
1061
1062 (define-public julia-documentermarkdown
1063 (package
1064 (name "julia-documentermarkdown")
1065 (version "0.2.2")
1066 (source
1067 (origin
1068 (method git-fetch)
1069 (uri (git-reference
1070 (url "https://github.com/JuliaDocs/DocumenterMarkdown.jl")
1071 (commit (string-append "v" version))))
1072 (file-name (git-file-name name version))
1073 (sha256
1074 (base32 "0sx89hi5p2f8zi2rp5qrv06m270d90pxj5d2y5cxls1spax7wqx8"))))
1075 (build-system julia-build-system)
1076 (inputs
1077 ;; We don't want to propagate the bootstrap version.
1078 ;; Cycle with Documenter.jl in later versions.
1079 `(("julia-documenter" ,julia-documenter-bootstrap)))
1080 (home-page "https://github.com/JuliaDocs/DocumenterMarkdown.jl")
1081 (synopsis "Documenter's Markdown")
1082 (description "This package enables the Markdown / MkDocs backend of
1083 @code{Documenter.jl}.")
1084 (license license:expat)))
1085
1086 (define-public julia-documentertools
1087 (package
1088 (name "julia-documentertools")
1089 (version "0.1.13")
1090 (source
1091 (origin
1092 (method git-fetch)
1093 (uri (git-reference
1094 (url "https://github.com/JuliaDocs/DocumenterTools.jl")
1095 (commit (string-append "v" version))))
1096 (file-name (git-file-name name version))
1097 (sha256
1098 (base32 "05p57p8xlkn42m1lv9gq4hl96vp7hpj19d51p828ai1rbpcpi3a6"))))
1099 (build-system julia-build-system)
1100 (arguments
1101 `(#:tests? #f)) ; Tests require network.
1102 (inputs
1103 ;; We don't want to propagate the bootstrap version.
1104 ;; Cycle with Documenter.jl in later versions.
1105 `(("julia-documenter" ,julia-documenter-bootstrap)))
1106 (propagated-inputs
1107 `(("julia-docstringextensions" ,julia-docstringextensions)
1108 ("julia-gumbo" ,julia-gumbo)
1109 ("julia-sass" ,julia-sass)))
1110 (native-inputs
1111 `(("julia-example" ,julia-example)))
1112 (home-page "https://github.com/JuliaDocs/DocumenterTools.jl")
1113 (synopsis "Extra tools for setting up Documenter.jl")
1114 (description "This package contains utilities for setting up documentation
1115 generation with @code{Documenter.jl}.")
1116 (license license:expat)))
1117
1118 (define-public julia-diffresults
1119 (package
1120 (name "julia-diffresults")
1121 (version "1.0.3")
1122 (source
1123 (origin
1124 (method git-fetch)
1125 (uri (git-reference
1126 (url "https://github.com/JuliaDiff/DiffResults.jl")
1127 (commit (string-append "v" version))))
1128 (file-name (git-file-name name version))
1129 (sha256
1130 (base32 "1w6p3yxajvclax5b9g7cr2jmbc7lvr5nk4gq0aljxdycdq1d2y3v"))))
1131 (propagated-inputs
1132 `(("julia-staticarrays" ,julia-staticarrays)))
1133 (build-system julia-build-system)
1134 (home-page "https://github.com/JuliaDiff/DiffResults.jl")
1135 (synopsis "In-place differentiation methods of primal values at multi-order")
1136 (description "This package provides the @code{DiffResult} type, which can
1137 be passed to in-place differentiation methods instead of an output buffer.")
1138 (license license:expat)))
1139
1140 (define-public julia-diffrules
1141 (package
1142 (name "julia-diffrules")
1143 (version "1.0.2")
1144 (source
1145 (origin
1146 (method git-fetch)
1147 (uri (git-reference
1148 (url "https://github.com/JuliaDiff/DiffRules.jl")
1149 (commit (string-append "v" version))))
1150 (file-name (git-file-name name version))
1151 (sha256
1152 (base32 "0cwjvj4gma7924fm3yas0nf0jlnwwx4v7fi79ii3s290lkdldzfl"))))
1153 (propagated-inputs
1154 `(("julia-nanmath" ,julia-nanmath)
1155 ("julia-specialfunctions" ,julia-specialfunctions)))
1156 (build-system julia-build-system)
1157 (home-page "https://github.com/JuliaDiff/DiffRules.jl")
1158 (synopsis "Primitive differentiation rules")
1159 (description "This package provides primitive differentiation rules that
1160 can be composed via various formulations of the chain rule. Using
1161 @code{DiffRules}, new differentiation rules can defined, query whether or not
1162 a given rule exists, and symbolically apply rules to simple Julia expressions.")
1163 (license license:expat)))
1164
1165 (define-public julia-difftests
1166 (package
1167 (name "julia-difftests")
1168 (version "0.1.1")
1169 (source
1170 (origin
1171 (method git-fetch)
1172 (uri (git-reference
1173 (url "https://github.com/JuliaDiff/DiffTests.jl")
1174 (commit (string-append "v" version))))
1175 (file-name (git-file-name name version))
1176 (sha256
1177 (base32 "1rxpnd5zi3pxgdd38l5jm2sxc3q6p7g57fqgll2dsiin07y3my57"))))
1178 (build-system julia-build-system)
1179 (home-page "https://github.com/JuliaDiff/DiffTests.jl")
1180 (synopsis "Common test functions for differentiation tools")
1181 (description "This package contains a common suite of test functions for
1182 stressing the robustness of differentiation tools.")
1183 (license license:expat)))
1184
1185 (define-public julia-dualnumbers
1186 (package
1187 (name "julia-dualnumbers")
1188 (version "0.6.5")
1189 (source
1190 (origin
1191 (method git-fetch)
1192 (uri (git-reference
1193 (url "https://github.com/JuliaDiff/DualNumbers.jl")
1194 (commit (string-append "v" version))))
1195 (file-name (git-file-name name version))
1196 (sha256
1197 (base32 "05vr5wbzqpchnb96b3pmn67x196mbfnkv7r9bdlz3gm56if4awk5"))))
1198 (build-system julia-build-system)
1199 (arguments
1200 `(#:phases
1201 (modify-phases %standard-phases
1202 (add-after 'unpack 'adjust-test-suite
1203 (lambda _
1204 (substitute* "test/runtests.jl"
1205 ;; Seems to not play nicely with SpecialFunctions
1206 ((".*isempty.*") "")))))))
1207 (propagated-inputs
1208 `(("julia-calculus" ,julia-calculus)
1209 ("julia-nanmath" ,julia-nanmath)
1210 ("julia-specialfunctions" ,julia-specialfunctions)))
1211 (home-page "https://github.com/JuliaDiff/DualNumbers.jl")
1212 (synopsis "Represent dual numbers and for perform dual algebra")
1213 (description "The @code{DualNumbers} Julia package defines the @code{Dual}
1214 type to represent dual numbers, and supports standard mathematical operations on
1215 them. Conversions and promotions are defined to allow performing operations on
1216 combinations of dual numbers with predefined Julia numeric types.")
1217 (license license:expat)))
1218
1219 (define-public julia-ellipsisnotation
1220 (package
1221 (name "julia-ellipsisnotation")
1222 (version "1.1.0")
1223 (source
1224 (origin
1225 (method git-fetch)
1226 (uri (git-reference
1227 (url "https://github.com/ChrisRackauckas/EllipsisNotation.jl")
1228 (commit (string-append "v" version))))
1229 (file-name (git-file-name name version))
1230 (sha256
1231 (base32 "0py46kxl702r8pw3v7x4cqllf7yc91b0dr7vb60xh2qi7d6y3jc7"))))
1232 (build-system julia-build-system)
1233 (arguments
1234 `(#:phases
1235 (modify-phases %standard-phases
1236 (add-after 'unpack 'adjust-test-suite
1237 (lambda _
1238 (substitute* "test/runtests.jl"
1239 ;; Seems to not play nicely with Julia-1.6.
1240 ((".*basic.jl.*") "")))))))
1241 (propagated-inputs
1242 `(("julia-arrayinterface" ,julia-arrayinterface)))
1243 (home-page "https://github.com/ChrisRackauckas/EllipsisNotation.jl")
1244 (synopsis "Elipsis notation implementation")
1245 (description "This implements the notation @code{..} for indexing arrays.
1246 It's similar to the Python @code{...} in that it means \"all of the columns
1247 before (or after)\".")
1248 (license license:expat)))
1249
1250 (define-public julia-example
1251 (let ((commit "f968c69dea24f851d0c7e686db23fa55826b5388"))
1252 (package
1253 (name "julia-example")
1254 (version "0.5.4") ;tag not created upstream
1255 (source
1256 (origin
1257 (method git-fetch)
1258 (uri (git-reference
1259 (url "https://github.com/JuliaLang/Example.jl")
1260 (commit commit)))
1261 (file-name (git-file-name name version))
1262 (sha256
1263 (base32 "1v3z0d6gh6wfbypffy9m9rhh36px6fm5wjzq0y6rbmc95r0qpqlx"))))
1264 (build-system julia-build-system)
1265 (home-page "https://github.com/JuliaLang/Example.jl")
1266 (synopsis "Module providing examples")
1267 (description "This package provides various examples.")
1268 (license license:expat))))
1269
1270 (define-public julia-exprtools
1271 (package
1272 (name "julia-exprtools")
1273 (version "0.1.6")
1274 (source
1275 (origin
1276 (method git-fetch)
1277 (uri (git-reference
1278 (url "https://github.com/invenia/ExprTools.jl")
1279 (commit (string-append "v" version))))
1280 (file-name (git-file-name name version))
1281 (sha256
1282 (base32 "058ax5d96jpym5w3g37ah1c4xq3fskwpjdhchakzax15vqzy7ab4"))))
1283 (build-system julia-build-system)
1284 (home-page "https://github.com/invenia/ExprTools.jl")
1285 (synopsis "Light-weight expression manipulation tools")
1286 (description "@code{ExprTools} provides tooling for working with Julia
1287 expressions during metaprogramming. This package aims to provide light-weight
1288 performant tooling without requiring additional package dependencies.")
1289 (license license:expat)))
1290
1291 (define-public julia-ffmpeg
1292 (package
1293 (name "julia-ffmpeg")
1294 (version "0.4.1")
1295 (source
1296 (origin
1297 (method git-fetch)
1298 (uri (git-reference
1299 (url "https://github.com/JuliaIO/FFMPEG.jl")
1300 (commit (string-append "v" version))))
1301 (file-name (git-file-name name version))
1302 (sha256
1303 (base32 "1ldxbp0kq3ip67x7sp82dz56aq4p5i0chspbgx2zgskr6jcbjj1b"))))
1304 (build-system julia-build-system)
1305 (propagated-inputs
1306 `(("julia-ffmpeg-jll" ,julia-ffmpeg-jll)
1307 ("julia-x264-jll" ,julia-x264-jll)))
1308 (home-page "https://github.com/JuliaIO/FFMPEG.jl")
1309 (synopsis "Julia Package for ffmpeg")
1310 (description "This package is made to be included into packages that just
1311 need the ffmpeg binaries + executables, and don't want the overhead of
1312 @code{VideoIO.jl}.")
1313 (license license:expat)))
1314
1315 (define-public julia-fileio
1316 (package
1317 (name "julia-fileio")
1318 (version "1.9.1")
1319 (source
1320 (origin
1321 (method git-fetch)
1322 (uri (git-reference
1323 (url "https://github.com/JuliaIO/FileIO.jl")
1324 (commit (string-append "v" version))))
1325 (file-name (git-file-name name version))
1326 (sha256
1327 (base32 "1b18x43i737g5q41n9818xbnc2pgd98q1m6yw3h29yri0clg4gfx"))))
1328 (build-system julia-build-system)
1329 (arguments
1330 `(#:phases
1331 (modify-phases %standard-phases
1332 (delete 'reset-gzip-timestamps)
1333 (add-after 'unpack 'skip-network-tests
1334 (lambda _
1335 ;; These tests try to download audio/video files.
1336 (substitute* "test/query.jl"
1337 (("testset.*(MP4|OGG|MATROSKA).*" all)
1338 (string-append all "return\n")))
1339 (substitute* "test/loadsave.jl"
1340 (("testset.*CSVFiles.*" all)
1341 (string-append all "return\n")))
1342 ;; This test tries to download a Julia package.
1343 (substitute* "test/error_handling.jl"
1344 (("testset.*Not installed.*" all)
1345 (string-append all "return\n")))
1346 ;; This test tries to write to the store.
1347 ;; (Error says can't find User 0)
1348 (substitute* "test/runtests.jl"
1349 ((".*test_mimesave.*") "")))))))
1350 (propagated-inputs
1351 `(("julia-requires" ,julia-requires)))
1352 (native-inputs
1353 `(("julia-colortypes" ,julia-colortypes)
1354 ("julia-filepathsbase" ,julia-filepathsbase)
1355 ("julia-http" ,julia-http)))
1356 (home-page "https://github.com/JuliaIO/FileIO.jl")
1357 (synopsis "Main Package for IO, loading all different kind of files")
1358 (description "@code{FileIO} aims to provide a common framework for detecting
1359 file formats and dispatching to appropriate readers/writers. The two core
1360 functions in this package are called @code{load} and @code{save}, and offer
1361 high-level support for formatted files (in contrast with Julia's low-level
1362 @code{read} and @code{write}).")
1363 (license license:expat)))
1364
1365 (define-public julia-filepathsbase
1366 (package
1367 (name "julia-filepathsbase")
1368 (version "0.9.10")
1369 (source
1370 (origin
1371 (method git-fetch)
1372 (uri (git-reference
1373 (url "https://github.com/rofinn/FilePathsBase.jl")
1374 (commit (string-append "v" version))))
1375 (file-name (git-file-name name version))
1376 (sha256
1377 (base32 "136wm4ik6isrdanmpi4gdr1qw0qhr15i925qzjxbawk5hnyzwng9"))))
1378 (build-system julia-build-system)
1379 (arguments
1380 `(#:tests? #f)) ; Cycle with JLSO.jl
1381 (home-page "https://github.com/rofinn/FilePathsBase.jl")
1382 (synopsis "Filesystem path types in Julia")
1383 (description "@code{FilePathsBase.jl} provides a type based approach to
1384 working with filesystem paths in Julia.")
1385 (license license:expat)))
1386
1387 (define-public julia-fillarrays
1388 (package
1389 (name "julia-fillarrays")
1390 (version "0.12.6")
1391 (source
1392 (origin
1393 (method git-fetch)
1394 (uri (git-reference
1395 (url "https://github.com/JuliaArrays/FillArrays.jl")
1396 (commit (string-append "v" version))))
1397 (file-name (git-file-name name version))
1398 (sha256
1399 (base32 "1sx96pzrgyh8k7x2w8vmyi6cazlmp7rg1n7wbl47qfzqjggka6kz"))))
1400 (build-system julia-build-system)
1401 (inputs ;required by tests
1402 `(("julia-staticarrays" ,julia-staticarrays)))
1403 (home-page "https://github.com/JuliaArrays/FillArrays.jl")
1404 (synopsis "Lazy matrix representation")
1405 (description "This package lazily represents matrices filled with
1406 a single entry, as well as identity matrices. This package exports the
1407 following types: @code{Eye}, @code{Fill}, @code{Ones}, @code{Zeros},
1408 @code{Trues} and @code{Falses}.")
1409 (license license:expat)))
1410
1411 (define-public julia-finitediff
1412 (package
1413 (name "julia-finitediff")
1414 (version "2.8.1")
1415 (source
1416 (origin
1417 (method git-fetch)
1418 (uri (git-reference
1419 (url "https://github.com/JuliaDiff/FiniteDiff.jl")
1420 (commit (string-append "v" version))))
1421 (file-name (git-file-name name version))
1422 (sha256
1423 (base32 "105f6r0hq97n9mxf1nacmz94dpca66vzqj5p3zh4h0brshmggqnq"))))
1424 (build-system julia-build-system)
1425 (arguments
1426 `(#:phases
1427 (modify-phases %standard-phases
1428 (add-before 'check 'pre-check
1429 (lambda _
1430 ;; We don't want to run all the tests; the Downstream tests
1431 ;; try to download the package registry.
1432 (setenv "GROUP" "Core")
1433 #t)))))
1434 (propagated-inputs
1435 `(("julia-arrayinterface" ,julia-arrayinterface)
1436 ("julia-requires" ,julia-requires)
1437 ("julia-staticarrays" ,julia-staticarrays)))
1438 (native-inputs
1439 `(("julia-bandedmatrices" ,julia-bandedmatrices)
1440 ("julia-blockbandedmatrices" ,julia-blockbandedmatrices)
1441 ("julia-safetestsets" ,julia-safetestsets)))
1442 (home-page "https://github.com/JuliaDiff/FiniteDiff.jl")
1443 (synopsis "Calculations of gradients, Jacobians, and Hessians")
1444 (description "This package is for calculating derivatives, gradients,
1445 Jacobians, Hessians, etc. numerically. This library is for maximizing speed
1446 while giving a usable interface to end users in a way that specializes on array
1447 types and sparsity.")
1448 (license license:expat)))
1449
1450 (define-public julia-finitedifferences
1451 (package
1452 (name "julia-finitedifferences")
1453 (version "0.12.17")
1454 (source
1455 (origin
1456 (method git-fetch)
1457 (uri (git-reference
1458 (url "https://github.com/JuliaDiff/FiniteDifferences.jl")
1459 (commit (string-append "v" version))))
1460 (file-name (git-file-name name version))
1461 (sha256
1462 (base32 "09nsf9cgk49yrvprflnhd9h5rrgs280rgj8sad3csghxdx6jqk5c"))))
1463 (build-system julia-build-system)
1464 (inputs
1465 `(("julia-benchmarktools" ,julia-benchmarktools)))
1466 (propagated-inputs
1467 `(("julia-chainrulescore" ,julia-chainrulescore)
1468 ("julia-richardson" ,julia-richardson)
1469 ("julia-staticarrays" ,julia-staticarrays)))
1470 (home-page "https://github.com/JuliaDiff/FiniteDifferences.jl")
1471 (synopsis "Estimates derivatives with finite differences")
1472 (description "This package calculates approximate derivatives numerically
1473 using finite difference.")
1474 (license license:expat)))
1475
1476 (define-public julia-fixedpointnumbers
1477 (package
1478 (name "julia-fixedpointnumbers")
1479 (version "0.8.4")
1480 (source
1481 (origin
1482 (method git-fetch)
1483 (uri (git-reference
1484 (url "https://github.com/JuliaMath/FixedPointNumbers.jl")
1485 (commit (string-append "v" version))))
1486 (file-name (git-file-name name version))
1487 (sha256
1488 (base32 "0j0n40n04q9sk68wh9jq90m6c67k4ws02k41djjzkrqmpzv4rcdi"))))
1489 (build-system julia-build-system)
1490 (arguments
1491 `(#:phases
1492 (modify-phases %standard-phases
1493 (add-after 'unpack 'disable-failing-test
1494 (lambda* (#:key outputs #:allow-other-keys)
1495 (substitute* "test/fixed.jl"
1496 ;; A deprecation warning is not thrown
1497 (("@test_logs.*:warn" all) (string-append "# " all)))
1498 #t)))))
1499 (propagated-inputs `(("julia-compat" ,julia-compat)))
1500 (home-page "https://github.com/JuliaMath/FixedPointNumbers.jl")
1501 (synopsis "Fixed point types for Julia")
1502 (description "@code{FixedPointNumbers.jl} implements fixed-point number
1503 types for Julia. A fixed-point number represents a fractional, or
1504 non-integral, number. In contrast with the more widely known floating-point
1505 numbers, with fixed-point numbers the decimal point doesn't \"float\":
1506 fixed-point numbers are effectively integers that are interpreted as being
1507 scaled by a constant factor. Consequently, they have a fixed number of
1508 digits (bits) after the decimal (radix) point.")
1509 (license license:expat)))
1510
1511 (define-public julia-formatting
1512 (package
1513 (name "julia-formatting")
1514 (version "0.4.2")
1515 (source
1516 (origin
1517 (method git-fetch)
1518 (uri (git-reference
1519 (url "https://github.com/JuliaIO/Formatting.jl")
1520 (commit (string-append "v" version))))
1521 (file-name (git-file-name name version))
1522 (sha256
1523 (base32 "0ma3q9my51rr38bb5712xkc4h3rq0wsfjb4ac6mdh9ywn8rqvrmh"))))
1524 (build-system julia-build-system)
1525 (home-page "https://github.com/JuliaIO/Formatting.jl")
1526 (synopsis "Julia package to provide Python-like formatting support")
1527 (description "This package offers Python-style general formatting and
1528 c-style numerical formatting.")
1529 (license license:expat)))
1530
1531 (define-public julia-forwarddiff
1532 (package
1533 (name "julia-forwarddiff")
1534 (version "0.10.18")
1535 (source
1536 (origin
1537 (method git-fetch)
1538 (uri (git-reference
1539 (url "https://github.com/JuliaDiff/ForwardDiff.jl")
1540 (commit (string-append "v" version))))
1541 (file-name (git-file-name name version))
1542 (sha256
1543 (base32 "1vb46x8mcn61g1l14qrk22c043khg2ml4q1ci7h4k2v34f2ak5fs"))))
1544 (build-system julia-build-system)
1545 (inputs ;required for tests
1546 `(("julia-calculus" ,julia-calculus)
1547 ("julia-difftests" ,julia-difftests)))
1548 (propagated-inputs
1549 `(("julia-commonsubexpressions" ,julia-commonsubexpressions)
1550 ("julia-diffresults" ,julia-diffresults)
1551 ("julia-diffrules" ,julia-diffrules)
1552 ("julia-nanmath" ,julia-nanmath)
1553 ("julia-specialfunctions" ,julia-specialfunctions)
1554 ("julia-staticarrays" ,julia-staticarrays)))
1555 (home-page "https://github.com/JuliaDiff/ForwardDiff.jl")
1556 (synopsis "Methods to take multidimensional derivatives")
1557 (description "This package implements methods to take derivatives,
1558 gradients, Jacobians, Hessians, and higher-order derivatives of native Julia
1559 functions (or any callable object, really) using forward mode automatic
1560 differentiation (AD).")
1561 (license license:expat)))
1562
1563 (define-public julia-functionwrappers
1564 (package
1565 (name "julia-functionwrappers")
1566 (version "1.1.2")
1567 (source
1568 (origin
1569 (method git-fetch)
1570 (uri (git-reference
1571 (url "https://github.com/yuyichao/FunctionWrappers.jl")
1572 (commit (string-append "v" version))))
1573 (file-name (git-file-name name version))
1574 (sha256
1575 (base32 "02jilpjr7px6138dx2w7ixricvfgsxqdk84d9dgviranibhnjcxa"))))
1576 (build-system julia-build-system)
1577 (arguments
1578 `(#:phases
1579 (modify-phases %standard-phases
1580 (add-after 'unpack 'adjust-tests
1581 (lambda _
1582 (substitute* "test/runtests.jl"
1583 (("testset \\\"Abstract.*" all)
1584 (string-append all "return\n"))))))))
1585 (home-page "https://github.com/yuyichao/FunctionWrappers.jl")
1586 (synopsis "Type stable and efficient wrapper of arbitrary functions")
1587 (description "This package provides a type stable and efficient wrapper of
1588 arbitrary functions.")
1589 (license license:expat)))
1590
1591 (define-public julia-fuzzycompletions
1592 (package
1593 (name "julia-fuzzycompletions")
1594 (version "0.4.1")
1595 (source
1596 (origin
1597 (method git-fetch)
1598 (uri (git-reference
1599 (url "https://github.com/JunoLab/FuzzyCompletions.jl")
1600 (commit (string-append "v" version))))
1601 (file-name (git-file-name name version))
1602 (sha256
1603 (base32 "07sv88c472n6w4x7diy952igbcfm1s104ysnnvprld83312siw06"))))
1604 (build-system julia-build-system)
1605 (arguments
1606 `(#:phases
1607 (modify-phases %standard-phases
1608 (add-after 'unpack 'skip-failing-test
1609 (lambda _
1610 (substitute* "test/runtests.jl"
1611 ((".*RPLE.*") "")))))))
1612 (home-page "https://github.com/JunoLab/FuzzyCompletions.jl")
1613 (synopsis "Fuzzy completion provider for Julia")
1614 (description
1615 "FuzzyCompletions provides fuzzy completions for a Julia runtime session.")
1616 (license license:expat)))
1617
1618 (define-public julia-genericlinearalgebra
1619 (package
1620 (name "julia-genericlinearalgebra")
1621 (version "0.2.5")
1622 (source
1623 (origin
1624 (method git-fetch)
1625 (uri (git-reference
1626 (url "https://github.com/JuliaLinearAlgebra/GenericLinearAlgebra.jl")
1627 (commit (string-append "v" version))))
1628 (file-name (git-file-name name version))
1629 (sha256
1630 (base32 "0ndwypa397z3pwzdgc3s9plaqlqf63g3d4px5pvym5psgr6lnm3l"))))
1631 (build-system julia-build-system)
1632 (arguments
1633 `(#:phases
1634 (modify-phases %standard-phases
1635 (add-after 'unpack 'adjust-test-suite
1636 (lambda _
1637 (substitute* "test/runtests.jl"
1638 ((".*lapack.*") "")))))))
1639 (native-inputs
1640 `(("julia-quaternions" ,julia-quaternions)))
1641 (home-page "https://github.com/JuliaLinearAlgebra/GenericLinearAlgebra.jl")
1642 (synopsis "Generic numerical linear algebra")
1643 (description "The purpose of this package is partly to extend linear algebra
1644 functionality in base to cover generic element types, e.g. @code{BigFloat} and
1645 @code{Quaternion}, and partly to be a place to experiment with fast linear
1646 algebra routines written in Julia (except for optimized BLAS).")
1647 (license license:expat)))
1648
1649 (define-public julia-genericschur
1650 (package
1651 (name "julia-genericschur")
1652 (version "0.5.1")
1653 (source
1654 (origin
1655 (method git-fetch)
1656 (uri (git-reference
1657 (url "https://github.com/RalphAS/GenericSchur.jl")
1658 (commit (string-append "v" version))))
1659 (file-name (git-file-name name version))
1660 (sha256
1661 (base32 "12x6lxzxm91y3k6s9dam46dq5hrby5sr0gy0fdfnp0xhjzdy2j0d"))))
1662 (build-system julia-build-system)
1663 (arguments
1664 `(#:phases
1665 (modify-phases %standard-phases
1666 (add-after 'unpack 'adjust-test-suite
1667 (lambda _
1668 (substitute* "test/complex.jl"
1669 ;; expected Array{Int32,1}, got a value of type Array{Int64,1}
1670 (("A = _example") "#A = _example")
1671 (("schurtest\\(A,20\\)") ""))
1672 (substitute* "test/runtests.jl"
1673 ;; Test errors relating to liblapack.so
1674 ((".*complex\\.jl.*") "")
1675 ((".*real\\.jl.*") "")
1676 ;; GenericSVD is deprecated upstream
1677 ((".*gordschur\\.jl.*") "")))))))
1678 (home-page "https://github.com/RalphAS/GenericSchur.jl")
1679 (synopsis "Schur decomposition of matrices with generic element types")
1680 (description "The Schur decomposition is the workhorse for eigensystem
1681 analysis of dense matrices. The diagonal eigen-decomposition of normal
1682 (especially Hermitian) matrices is an important special case, but for non-normal
1683 matrices the Schur form is often more useful.")
1684 (license license:expat)))
1685
1686 (define-public julia-graphics
1687 (package
1688 (name "julia-graphics")
1689 (version "1.1.0")
1690 (source
1691 (origin
1692 (method git-fetch)
1693 (uri (git-reference
1694 (url "https://github.com/JuliaGraphics/Graphics.jl")
1695 (commit (string-append "v" version))))
1696 (file-name (git-file-name name version))
1697 (sha256
1698 (base32 "10h1s09v7qkvrjr6l678zamb1p248n8jv4rrwkf8g7d2bpfz9amn"))))
1699 (build-system julia-build-system)
1700 (propagated-inputs
1701 `(("julia-colors" ,julia-colors)
1702 ("julia-nanmath" ,julia-nanmath)))
1703 (home-page "https://github.com/JuliaGraphics/Graphics.jl")
1704 (synopsis "Base graphics in Julia")
1705 (description "@code{Graphics.jl} is an abstraction layer for graphical
1706 operations in Julia.")
1707 (license license:expat)))
1708
1709 (define-public julia-gumbo
1710 (package
1711 (name "julia-gumbo")
1712 (version "0.8.0")
1713 (source
1714 (origin
1715 (method git-fetch)
1716 (uri (git-reference
1717 (url "https://github.com/JuliaWeb/Gumbo.jl")
1718 (commit (string-append "v" version))))
1719 (file-name (git-file-name name version))
1720 (sha256
1721 (base32 "1g22dv3v7caakspv3pdahnqn937fzzsg9y87rj72hid9g8lxl1gm"))))
1722 (build-system julia-build-system)
1723 (propagated-inputs
1724 `(("julia-abstracttrees" ,julia-abstracttrees)
1725 ("julia-gumbo-jll" ,julia-gumbo-jll)))
1726 (home-page "https://github.com/JuliaWeb/Gumbo.jl")
1727 (synopsis "Julia wrapper around Google's gumbo C library for parsing HTML")
1728 (description "@code{Gumbo.jl} is a Julia wrapper around Google's gumbo
1729 library for parsing HTML.")
1730 (license license:expat)))
1731
1732 (define-public julia-http
1733 (package
1734 (name "julia-http")
1735 (version "0.9.12")
1736 (source
1737 (origin
1738 (method git-fetch)
1739 (uri (git-reference
1740 (url "https://github.com/JuliaWeb/HTTP.jl")
1741 (commit (string-append "v" version))))
1742 (file-name (git-file-name name version))
1743 (sha256
1744 (base32 "1jsyk3mhnwj4h19cxclx26igdqdrw51fd3k1hgav0nm67dy4cxyk"))))
1745 (build-system julia-build-system)
1746 (arguments
1747 `(#:phases
1748 (modify-phases %standard-phases
1749 (add-before 'install 'disable-network-tests
1750 (lambda _
1751 (substitute* "test/runtests.jl"
1752 (("\"async.jl") "# \"async.jl")
1753 (("\"client.jl") "# \"client.jl"))
1754 (substitute* "test/aws4.jl"
1755 (("@testset.*HTTP.request with AWS authentication.*" all)
1756 (string-append all "return\n")))
1757 (substitute* "test/insert_layers.jl"
1758 (("@testset.*Inserted final layer runs handler.*" all)
1759 (string-append all "return\n")))
1760 (substitute* "test/multipart.jl"
1761 (("@testset \"Setting of Content-Type.*" all)
1762 (string-append all "return\n"))
1763 (("@testset \"Deprecation of .*" all)
1764 (string-append all "return\n")))
1765 (substitute* "test/websockets.jl"
1766 (("@testset.*External Host.*" all)
1767 (string-append all "return\n")))
1768 (substitute* "test/messages.jl"
1769 (("@testset.*Read methods.*" all)
1770 (string-append all "return\n"))
1771 (("@testset.*Body - .*" all)
1772 (string-append all "return\n"))
1773 (("@testset.*Write to file.*" all)
1774 (string-append all "return\n")))
1775 #t)))))
1776 (propagated-inputs
1777 `(("julia-inifile" ,julia-inifile)
1778 ("julia-mbedtls" ,julia-mbedtls)
1779 ("julia-uris" ,julia-uris)))
1780 ;; required for tests
1781 (inputs
1782 `(("julia-json" ,julia-json)
1783 ("julia-bufferedstreams" ,julia-bufferedstreams)))
1784 (home-page "https://juliaweb.github.io/HTTP.jl/")
1785 (synopsis "HTTP support for Julia")
1786 (description "@code{HTTP.jl} is a Julia library for HTTP Messages,
1787 implementing both a client and a server.")
1788 (license license:expat)))
1789
1790 (define-public julia-identityranges
1791 (package
1792 (name "julia-identityranges")
1793 (version "0.3.1")
1794 (source
1795 (origin
1796 (method git-fetch)
1797 (uri (git-reference
1798 (url "https://github.com/JuliaArrays/IdentityRanges.jl")
1799 (commit (string-append "v" version))))
1800 (file-name (git-file-name name version))
1801 (sha256
1802 (base32 "0jvl4xn8f8k70sn473li5q62wbiycl5qi25b5k456h3a0j1lbiml"))))
1803 (build-system julia-build-system)
1804 (propagated-inputs
1805 `(("julia-offsetarrays" ,julia-offsetarrays)))
1806 (home-page "https://github.com/JuliaArrays/IdentityRanges.jl")
1807 (synopsis "Ranges that preserve indices of views")
1808 (description "@code{IdentityRanges} are Julia-language a helper type for
1809 creating \"views\" of arrays. They are a custom type of AbstractUnitRange that
1810 makes it easy to preserve the indices of array views. The key property of an
1811 @code{IdentityRange r} is that @code{r[i] == i} (hence the name of the
1812 type/package), and that they support arbitrary start/stop indices (i.e., not
1813 just starting at 1).")
1814 (license license:expat)))
1815
1816 (define-public julia-ifelse
1817 (package
1818 (name "julia-ifelse")
1819 (version "0.1.0")
1820 (source
1821 (origin
1822 (method git-fetch)
1823 (uri (git-reference
1824 (url "https://github.com/sciml/ifelse.jl")
1825 (commit (string-append "v" version))))
1826 (file-name (git-file-name name version))
1827 (sha256
1828 (base32 "1wrw842r8708fryf2ihp9mkmdrg27saa9nix2c31vs995k2fgr9w"))))
1829 (build-system julia-build-system)
1830 (home-page "https://github.com/sciml/ifelse.jl")
1831 (synopsis "Function form of the if-else conditional statement")
1832 (description "This package provides a convenient function form of the
1833 conditional ifelse. It is similar to @code{Core.ifelse} but it is extendable.")
1834 (license license:expat)))
1835
1836 (define-public julia-imageaxes
1837 (package
1838 (name "julia-imageaxes")
1839 (version "0.6.9")
1840 (source
1841 (origin
1842 (method git-fetch)
1843 (uri (git-reference
1844 (url "https://github.com/JuliaImages/ImageAxes.jl")
1845 (commit (string-append "v" version))))
1846 (file-name (git-file-name name version))
1847 (sha256
1848 (base32 "15zqxani1jjh8849s7rdps6b6prqdwv8yxx893y536vkpk7i07qd"))))
1849 (build-system julia-build-system)
1850 (propagated-inputs
1851 `(("julia-axisarrays" ,julia-axisarrays)
1852 ("julia-imagecore" ,julia-imagecore)
1853 ("julia-reexport" ,julia-reexport)
1854 ("julia-simpletraits" ,julia-simpletraits)))
1855 (native-inputs
1856 `(("julia-unitful" ,julia-unitful)))
1857 (home-page "https://github.com/JuliaImages/ImageAxes.jl")
1858 (synopsis "Julia package for giving \"meaning\" to the axes of an image")
1859 (description "This small package supports the representation of images as
1860 @code{AxisArrays} to endow the axes with \"meaning,\" and makes programming with
1861 such arrays easy via traits.")
1862 (license license:expat)))
1863
1864 (define-public julia-imagebase
1865 (package
1866 (name "julia-imagebase")
1867 (version "0.1.1")
1868 (source
1869 (origin
1870 (method git-fetch)
1871 (uri (git-reference
1872 (url "https://github.com/JuliaImages/ImageBase.jl")
1873 (commit (string-append "v" version))))
1874 (file-name (git-file-name name version))
1875 (sha256
1876 (base32 "1n63f2zs6ail9pcl7rzgv3l0z8v1idjsaza3zgvgy7iacxsdpcj2"))))
1877 (build-system julia-build-system)
1878 (arguments
1879 `(#:tests? #f)) ; Cycle with ImageMagick.jl.
1880 (propagated-inputs
1881 `(("julia-imagecore" ,julia-imagecore)
1882 ("julia-reexport" ,julia-reexport)))
1883 ;(native-inputs
1884 ; `(("julia-imagemagick" ,julia-imagemagick)
1885 ; ("julia-offsetarrays" ,julia-offsetarrays)
1886 ; ("julia-testimages" ,julia-testimages)))
1887 (home-page "https://github.com/JuliaImages/ImageBase.jl")
1888 (synopsis "Wrapper package around ImageCore")
1889 (description "This is a twin package to @code{ImageCore} with functions that
1890 are used among many of the packages in JuliaImages. The main purpose of this
1891 package is to reduce unnecessary compilation overhead from external
1892 dependencies.")
1893 (license license:expat)))
1894
1895 (define-public julia-imagecore
1896 (package
1897 (name "julia-imagecore")
1898 (version "0.9.1")
1899 (source
1900 (origin
1901 (method git-fetch)
1902 (uri (git-reference
1903 (url "https://github.com/JuliaImages/ImageCore.jl")
1904 (commit (string-append "v" version))))
1905 (file-name (git-file-name name version))
1906 (sha256
1907 (base32 "0h9m3pl3wic1jrgaqkdifz24cya5vxd3m6qdmm37pxg2y2ii2vcq"))))
1908 (build-system julia-build-system)
1909 (arguments
1910 `(#:tests? #f)) ; Cycle with ImageMagick.jl.
1911 (propagated-inputs
1912 `(("julia-abstractffts" ,julia-abstractffts)
1913 ("julia-colors" ,julia-colors)
1914 ("julia-colorvectorspace" ,julia-colorvectorspace)
1915 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
1916 ("julia-graphics" ,julia-graphics)
1917 ("julia-mappedarrays" ,julia-mappedarrays)
1918 ("julia-mosaicviews" ,julia-mosaicviews)
1919 ("julia-offsetarrays" ,julia-offsetarrays)
1920 ("julia-paddedviews" ,julia-paddedviews)
1921 ("julia-reexport" ,julia-reexport)))
1922 ;(native-inputs
1923 ; `(("julia-aqua" ,julia-aqua)
1924 ; ("julia-colorvectorspace" ,julia-colorvectorspace)
1925 ; ("julia-documenter" ,julia-documenter)
1926 ; ("julia-fftw" ,julia-fftw)
1927 ; ("julia-imageinterminal" ,julia-imageinterminal)
1928 ; ("julia-imagemagick" ,julia-imagemagick)
1929 ; ("julia-referencetests" ,julia-referencetests)
1930 ; ("julia-statistics" ,julia-statistics)))
1931 (home-page "https://github.com/JuliaImages/ImageCore.jl")
1932 (synopsis "Julia types for representing images")
1933 (description "@code{ImageCore} is the lowest-level component of the system
1934 of packages designed to support image processing and computer vision.")
1935 (license license:expat)))
1936
1937 (define-public julia-imageinterminal
1938 (package
1939 (name "julia-imageinterminal")
1940 (version "0.4.7")
1941 (source
1942 (origin
1943 (method git-fetch)
1944 (uri (git-reference
1945 (url "https://github.com/JuliaImages/ImageInTerminal.jl")
1946 (commit (string-append "v" version))))
1947 (file-name (git-file-name name version))
1948 (sha256
1949 (base32 "0bbpzi7bv8jdiggq1wmcn67vnf96qagvwg0fk95s125wy5980xsl"))))
1950 (build-system julia-build-system)
1951 (arguments
1952 `(#:tests? #f)) ; Cycle with ReferenceTests.jl.
1953 (propagated-inputs
1954 `(("julia-crayons" ,julia-crayons)
1955 ("julia-imagebase" ,julia-imagebase)
1956 ("julia-imagecore" ,julia-imagecore)
1957 ("julia-requires" ,julia-requires)))
1958 ;(native-inputs
1959 ; `(("julia-coordinatetransformations" ,julia-coordinatetransformations)
1960 ; ("julia-imagemagick" ,julia-imagemagick)
1961 ; ("julia-imagetransformations" ,julia-imagetransformations)
1962 ; ("julia-offsetarrays" ,julia-offsetarrays)
1963 ; ("julia-referencetests" ,julia-referencetests)
1964 ; ("julia-rotations" ,julia-rotations)
1965 ; ("julia-sparsearrays" ,julia-sparsearrays)
1966 ; ("julia-testimages" ,julia-testimages)))
1967 (home-page "https://github.com/JuliaImages/ImageInTerminal.jl")
1968 (synopsis "Julia package for displaying images in the terminal")
1969 (description "@code{ImageInTerminal.jl} is a drop-in package that once
1970 imported changes a how a single @code{Colorant} and whole @code{Colorant} arrays
1971 (i.e. Images) are displayed in the interactive REPL. The displayed images will
1972 be downscaled to fit into the size of your active terminal session.")
1973 (license license:expat)))
1974
1975 (define-public julia-imagemagick
1976 (package
1977 (name "julia-imagemagick")
1978 (version "1.2.1")
1979 (source
1980 (origin
1981 (method git-fetch)
1982 (uri (git-reference
1983 (url "https://github.com/JuliaIO/ImageMagick.jl")
1984 (commit (string-append "v" version))))
1985 (file-name (git-file-name name version))
1986 (sha256
1987 (base32 "05vzv4jsj3l9pv6yrix28hlw7wnag0mqdfjwv8shn4x71hcfxl1p"))))
1988 (build-system julia-build-system)
1989 (arguments
1990 `(#:phases
1991 (modify-phases %standard-phases
1992 (add-after 'unpack 'skip-failing-test
1993 (lambda _
1994 ;; These tests try to download from the imagemagick.org
1995 (substitute* "test/runtests.jl"
1996 ((".*readremote\\.jl.*") ""))
1997 ;; Tests with the color gray are hard.
1998 (substitute* "test/constructed_images.jl"
1999 (("test (b == aa)" _ test) (string-append "test_nowarn " test))
2000 (("test (B == map)" _ test) (string-append "test_nowarn " test)))
2001 #t)))))
2002 (propagated-inputs
2003 `(("julia-fileio" ,julia-fileio)
2004 ("julia-imagecore" ,julia-imagecore)
2005 ("julia-imagemagick-jll" ,julia-imagemagick-jll)))
2006 (native-inputs
2007 `(("julia-colors" ,julia-colors)
2008 ("julia-colorvectorspace" ,julia-colorvectorspace)
2009 ("julia-imagemetadata" ,julia-imagemetadata)
2010 ("julia-imageshow" ,julia-imageshow)
2011 ("julia-imagetransformations" ,julia-imagetransformations)
2012 ("julia-indirectarrays" ,julia-indirectarrays)
2013 ("julia-offsetarrays" ,julia-offsetarrays)
2014 ("julia-zipfile" ,julia-zipfile)))
2015 (home-page "https://github.com/JuliaIO/ImageMagick.jl")
2016 (synopsis "Thin wrapper for ImageMagick")
2017 (description "This package provides a wrapper around ImageMagick version 6.
2018 It was split off from @code{Images.jl} to make image I/O more modular.")
2019 (license license:expat)))
2020
2021 (define-public julia-imagemetadata
2022 (package
2023 (name "julia-imagemetadata")
2024 (version "0.9.6")
2025 (source
2026 (origin
2027 (method git-fetch)
2028 (uri (git-reference
2029 (url "https://github.com/JuliaImages/ImageMetadata.jl")
2030 (commit (string-append "v" version))))
2031 (file-name (git-file-name name version))
2032 (sha256
2033 (base32 "0iv154ms370xgcr56bwsjl13iwmy671cbxjl9ld5yfj85pclcwi1"))))
2034 (build-system julia-build-system)
2035 (propagated-inputs
2036 `(("julia-axisarrays" ,julia-axisarrays)
2037 ("julia-imageaxes" ,julia-imageaxes)
2038 ("julia-imagecore" ,julia-imagecore)
2039 ("julia-indirectarrays" ,julia-indirectarrays)))
2040 (native-inputs
2041 `(("julia-offsetarrays" ,julia-offsetarrays)
2042 ("julia-simpletraits" ,julia-simpletraits)
2043 ("julia-unitful" ,julia-unitful)))
2044 (home-page "https://github.com/JuliaImages/ImageMetadata.jl")
2045 (synopsis "Julia package for images having metadata")
2046 (description "@code{ImageMetadata} is a simple package providing utilities
2047 for working with images that have metadata attached. For example, you might
2048 want to associate an image with the date on which the picture was taken, or an
2049 MRI scan with patient data, or an astronomical image with sky coordinates and
2050 information about the detector used to acquire the image.")
2051 (license license:expat)))
2052
2053 (define-public julia-imageshow
2054 (package
2055 (name "julia-imageshow")
2056 (version "0.3.2")
2057 (source
2058 (origin
2059 (method git-fetch)
2060 (uri (git-reference
2061 (url "https://github.com/JuliaImages/ImageShow.jl")
2062 (commit (string-append "v" version))))
2063 (file-name (git-file-name name version))
2064 (sha256
2065 (base32 "00wq3ab8y6nyhxwc5lpz9dnslsmcr1vg3cjdkh7wb7k6a8bw98mh"))))
2066 (build-system julia-build-system)
2067 (arguments
2068 `(#:tests? #f)) ; cycle with ImageMagick.jl.
2069 (propagated-inputs
2070 `(("julia-fileio" ,julia-fileio)
2071 ("julia-imagebase" ,julia-imagebase)
2072 ("julia-imagecore" ,julia-imagecore)
2073 ("julia-offsetarrays" ,julia-offsetarrays)
2074 ("julia-stackviews" ,julia-stackviews)))
2075 ;(native-inputs
2076 ; `(("julia-imagedistances" ,julia-imagedistances)
2077 ; ("julia-imagemagick" ,julia-imagemagick)
2078 ; ("julia-suppressor" ,julia-suppressor)
2079 ; ("julia-testimages" ,julia-testimages)))
2080 (home-page "https://github.com/JuliaImages/ImageShow.jl")
2081 (synopsis
2082 "Inline graphical display of images in Julia graphical environments")
2083 (description "This package implements image @code{show} methods suitable
2084 for graphical platforms such as IJulia. It is intended to provide convenient
2085 inline presentation of greyscale or color images.")
2086 (license license:expat)))
2087
2088 (define-public julia-imagetransformations
2089 (package
2090 (name "julia-imagetransformations")
2091 (version "0.8.12")
2092 (source
2093 (origin
2094 (method git-fetch)
2095 (uri (git-reference
2096 (url "https://github.com/JuliaImages/ImageTransformations.jl")
2097 (commit (string-append "v" version))))
2098 (file-name (git-file-name name version))
2099 (sha256
2100 (base32 "0i8gw68hljshsy9wdl5mrpbb31irhmayqyglsxi7jwm88iy9pxhm"))))
2101 (build-system julia-build-system)
2102 (arguments
2103 `(#:tests? #f)) ; Cycle with ImageMagick.jl.
2104 (propagated-inputs
2105 `(("julia-axisalgorithms" ,julia-axisalgorithms)
2106 ("julia-colorvectorspace" ,julia-colorvectorspace)
2107 ("julia-coordinatetransformations" ,julia-coordinatetransformations)
2108 ("julia-identityranges" ,julia-identityranges)
2109 ("julia-imagecore" ,julia-imagecore)
2110 ("julia-interpolations" ,julia-interpolations)
2111 ("julia-offsetarrays" ,julia-offsetarrays)
2112 ("julia-rotations" ,julia-rotations)
2113 ("julia-staticarrays" ,julia-staticarrays)))
2114 ;(native-inputs
2115 ; `(("julia-imagemagick" ,julia-imagemagick)
2116 ; ("julia-referencetests" ,julia-referencetests)
2117 ; ("julia-testimages" ,julia-testimages)))
2118 (home-page "https://github.com/JuliaImages/ImageTransformations.jl")
2119 (synopsis "Geometric transformations on images for Julia")
2120 (description "This package provides support for image resizing, image
2121 rotation, and other spatial transformations of arrays.")
2122 (license license:expat)))
2123
2124 (define-public julia-indexing
2125 (package
2126 (name "julia-indexing")
2127 (version "1.1.1")
2128 (source
2129 (origin
2130 (method git-fetch)
2131 (uri (git-reference
2132 (url "https://github.com/andyferris/Indexing.jl")
2133 (commit (string-append "v" version))))
2134 (file-name (git-file-name name version))
2135 (sha256
2136 (base32 "1s7bz5aaj9sx753pcaixq83jgbk33adxgybpinjgzb9lzdv1ddgx"))))
2137 (build-system julia-build-system)
2138 (home-page "https://github.com/andyferris/Indexing.jl")
2139 (synopsis "Generalized indexing for Julia")
2140 (description "This package defines functions for getting multiple indices
2141 out of dictionaries, tuples, etc, extending this ability beyond
2142 @code{AbstractArray}.")
2143 (license license:expat)))
2144
2145 (define-public julia-indirectarrays
2146 (package
2147 (name "julia-indirectarrays")
2148 (version "0.5.1")
2149 (source
2150 (origin
2151 (method git-fetch)
2152 (uri (git-reference
2153 (url "https://github.com/JuliaArrays/IndirectArrays.jl")
2154 (commit (string-append "v" version))))
2155 (file-name (git-file-name name version))
2156 (sha256
2157 (base32 "0l0jq0jnr9z3k431ni82xycq7mqapgxrbrx4yyk6lycvi41ipm4s"))))
2158 (build-system julia-build-system)
2159 (native-inputs
2160 `(("julia-colors" ,julia-colors)
2161 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
2162 ("julia-mappedarrays" ,julia-mappedarrays)))
2163 (home-page "https://github.com/JuliaArrays/IndirectArrays.jl")
2164 (synopsis "Julia implementation of indexed arrays")
2165 (description "An @code{IndirectArray} is one that encodes data using a
2166 combination of an @code{index} and a @code{value} table. Each element is
2167 assigned its own index, which is used to retrieve the value from the
2168 @code{value} table. Among other uses, @code{IndirectArrays} can represent
2169 indexed images, sometimes called \"colormap images\" or \"paletted images.\"")
2170 (license license:expat)))
2171
2172 (define-public julia-inifile
2173 (package
2174 (name "julia-inifile")
2175 (version "0.5.0")
2176 (source
2177 (origin
2178 (method git-fetch)
2179 (uri (git-reference
2180 (url "https://github.com/JuliaIO/IniFile.jl")
2181 (commit "8ba59958495fa276d6489d2c3903e765d75e0bc0")))
2182 (file-name (git-file-name name version))
2183 (sha256
2184 (base32 "11h6f99jpbg729lplw841m68jprka7q3n8yw390bndlmcdsjabpd"))))
2185 (build-system julia-build-system)
2186 (home-page "https://github.com/JuliaIO/IniFile.jl")
2187 (synopsis "Reading Windows-style INI files")
2188 (description "This is a Julia package that defines an IniFile type that
2189 interfaces with @file{.ini} files.")
2190 (license license:expat)))
2191
2192 (define-public julia-interpolations
2193 (package
2194 (name "julia-interpolations")
2195 (version "0.13.3")
2196 (source
2197 (origin
2198 (method git-fetch)
2199 (uri (git-reference
2200 (url "https://github.com/JuliaMath/Interpolations.jl")
2201 (commit (string-append "v" version))))
2202 (file-name (git-file-name name version))
2203 (sha256
2204 (base32 "1236c20k388qlh7k74mhf7hkbn0vf7ss8b1rgh1a6aj0234ayfnc"))))
2205 (build-system julia-build-system)
2206 (propagated-inputs
2207 `(("julia-axisalgorithms" ,julia-axisalgorithms)
2208 ("julia-offsetarrays" ,julia-offsetarrays)
2209 ("julia-ratios" ,julia-ratios)
2210 ("julia-requires" ,julia-requires)
2211 ("julia-staticarrays" ,julia-staticarrays)
2212 ("julia-woodburymatrices" ,julia-woodburymatrices)))
2213 (native-inputs
2214 `(("julia-dualnumbers" ,julia-dualnumbers)
2215 ("julia-forwarddiff" ,julia-forwarddiff)
2216 ("julia-offsetarrays" ,julia-offsetarrays)
2217 ("julia-unitful" ,julia-unitful)
2218 ("julia-zygote" ,julia-zygote)))
2219 (home-page "https://github.com/JuliaMath/Interpolations.jl")
2220 (synopsis "Continuous interpolation of discrete datasets")
2221 (description "This package implements a variety of interpolation schemes for
2222 the Julia language. It has the goals of ease-of-use, broad algorithmic support,
2223 and exceptional performance.")
2224 (license license:expat)))
2225
2226 (define-public julia-intervalsets
2227 (package
2228 (name "julia-intervalsets")
2229 (version "0.5.3")
2230 (source
2231 (origin
2232 (method git-fetch)
2233 (uri (git-reference
2234 (url "https://github.com/JuliaMath/IntervalSets.jl")
2235 (commit (string-append "v" version))))
2236 (file-name (git-file-name name version))
2237 (sha256
2238 (base32 "0gsz89cd3iygbl5qr389k9vwpg7w1nk0s90g25nsmk34y9hifxag"))))
2239 (build-system julia-build-system)
2240 (propagated-inputs
2241 `(("julia-ellipsisnotation" ,julia-ellipsisnotation)))
2242 (native-inputs
2243 `(("julia-offsetarrays" ,julia-offsetarrays)))
2244 (home-page "https://github.com/JuliaMath/IntervalSets.jl")
2245 (synopsis "Interval Sets for Julia")
2246 (description "This package is intended to implement a \"minimal\" foundation
2247 for intervals upon which other packages might build. In particular, we
2248 encourage type-piracy for the reason that only one interval package can
2249 unambiguously define the @code{..} and @code{±} operators.")
2250 (license license:expat)))
2251
2252 (define-public julia-invertedindices
2253 (package
2254 (name "julia-invertedindices")
2255 (version "1.0.0")
2256 (source
2257 (origin
2258 (method git-fetch)
2259 (uri (git-reference
2260 (url "https://github.com/mbauman/InvertedIndices.jl")
2261 (commit (string-append "v" version))))
2262 (file-name (git-file-name name version))
2263 (sha256
2264 (base32 "1179z20yxnkyziip7gn26wr1g3k3ssl1ci7pig3khc900f62di46"))))
2265 (build-system julia-build-system)
2266 (native-inputs
2267 `(("julia-offsetarrays" ,julia-offsetarrays)))
2268 (home-page "https://github.com/mbauman/InvertedIndices.jl")
2269 (synopsis "Index type that allows for inverted selections")
2270 (description "This package just exports one type: the @code{InvertedIndex},
2271 or @code{Not} for short. It can wrap any supported index type and may be used
2272 as an index into any @code{AbstractArray} subtype, including OffsetArrays.")
2273 (license license:expat)))
2274
2275 (define-public julia-iocapture
2276 (package
2277 (name "julia-iocapture")
2278 (version "0.2.2")
2279 (source
2280 (origin
2281 (method git-fetch)
2282 (uri (git-reference
2283 (url "https://github.com/JuliaDocs/IOCapture.jl")
2284 (commit (string-append "v" version))))
2285 (file-name (git-file-name name version))
2286 (sha256
2287 (base32 "0v76wbvg80g9nx0rjbcna82zk61krly1y9yhyfrjv2pf7mcr4idb"))))
2288 (build-system julia-build-system)
2289 (home-page "https://github.com/JuliaDocs/IOCapture.jl")
2290 (synopsis "Capture standard output and error streams")
2291 (description "This package provides the @code{IOCapture.capture(f)}
2292 function, which captures the standard output and standard error, and returns it
2293 as a string together with the return value.")
2294 (license license:expat)))
2295
2296 (define-public julia-irtools
2297 (package
2298 (name "julia-irtools")
2299 (version "0.4.3")
2300 (source
2301 (origin
2302 (method git-fetch)
2303 (uri (git-reference
2304 (url "https://github.com/FluxML/IRTools.jl")
2305 (commit (string-append "v" version))))
2306 (file-name (git-file-name name version))
2307 (sha256
2308 (base32 "11334fcg2slpwcj0raxf457brhf7pxglgxc6cy8q58ggrpxqfqql"))))
2309 (arguments
2310 '(#:tests? #f)) ;require Documenter, not packaged yet
2311 (build-system julia-build-system)
2312 (propagated-inputs
2313 `(("julia-macrotools" ,julia-macrotools)))
2314 (home-page "https://github.com/FluxML/IRTools.jl")
2315 (synopsis "Simple and flexible IR format")
2316 (description "This package provides a simple and flexible IR format,
2317 expressive enough to work with both lowered and typed Julia code, as well as
2318 external IRs. It can be used with Julia metaprogramming tools such as
2319 Cassette.")
2320 (license license:expat)))
2321
2322 (define-public julia-iteratorinterfaceextensions
2323 (package
2324 (name "julia-iteratorinterfaceextensions")
2325 (version "1.0.0")
2326 (source
2327 (origin
2328 (method git-fetch)
2329 (uri (git-reference
2330 (url "https://github.com/queryverse/IteratorInterfaceExtensions.jl")
2331 (commit (string-append "v" version))))
2332 (file-name (git-file-name name version))
2333 (sha256
2334 (base32 "1slpay1dhja8f9gy6z7b3psgvgcknn963dvfqqakvg1grk9ppa09"))))
2335 (build-system julia-build-system)
2336 (home-page "https://github.com/queryverse/IteratorInterfaceExtensions.jl")
2337 (synopsis "Traits for Julia iterators")
2338 (description "IteratorInterfaceExtensions defines a small number of
2339 extensions to the iterator interface.")
2340 (license license:expat)))
2341
2342 (define-public julia-itertools
2343 (package
2344 (name "julia-itertools")
2345 (version "1.3.0")
2346 (source
2347 (origin
2348 (method git-fetch)
2349 (uri (git-reference
2350 (url "https://github.com/JuliaCollections/IterTools.jl")
2351 (commit (string-append "v" version))))
2352 (file-name (git-file-name name version))
2353 (sha256
2354 (base32 "0haf974kcqj6arv4if97ahs4w3dmvslh6ab3hl57r9s41ic36xdq"))))
2355 (build-system julia-build-system)
2356 (home-page "https://github.com/JuliaCollections/IterTools.jl")
2357 (synopsis "Common functional iterator patterns")
2358 (description
2359 "Common functional iterator patterns (formerly @code{Iterators.jl}).")
2360 (license license:expat)))
2361
2362 (define-public julia-json
2363 (package
2364 (name "julia-json")
2365 (version "0.21.1")
2366 (source
2367 (origin
2368 (method git-fetch)
2369 (uri (git-reference
2370 (url "https://github.com/JuliaIO/JSON.jl")
2371 (commit (string-append "v" version))))
2372 (file-name (git-file-name name version))
2373 (sha256
2374 (base32 "1f9k613kbknmp4fgjxvjaw4d5sfbx8a5hmcszmp1w9rqfqngjx9m"))))
2375 (build-system julia-build-system)
2376 (propagated-inputs
2377 `(("julia-datastructures" ,julia-datastructures)
2378 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
2379 ("julia-parsers" ,julia-parsers)
2380 ("julia-offsetarrays" ,julia-offsetarrays)))
2381 (home-page "https://github.com/JuliaIO/JSON.jl")
2382 (synopsis "JSON parsing and printing library for Julia")
2383 (description "@code{JSON.jl} is a pure Julia module which supports parsing
2384 and printing JSON documents.")
2385 (license license:expat)))
2386
2387 (define-public julia-json3
2388 (package
2389 (name "julia-json3")
2390 (version "1.9.0")
2391 (source
2392 (origin
2393 (method git-fetch)
2394 (uri (git-reference
2395 (url "https://github.com/quinnj/JSON3.jl")
2396 (commit (string-append "v" version))))
2397 (file-name (git-file-name name version))
2398 (sha256
2399 (base32 "11z5maz7v50wd99id8z7838higza0cllh2amkdkrlskbri3v2f17"))))
2400 (build-system julia-build-system)
2401 (propagated-inputs
2402 `(("julia-parsers" ,julia-parsers)
2403 ("julia-structtypes" ,julia-structtypes)))
2404 (home-page "https://github.com/quinnj/JSON3.jl")
2405 (synopsis "JSON package for Julia")
2406 (description "This package provides another JSON package for Julia, with a
2407 focus on speed and slick struct mapping.")
2408 (license license:expat)))
2409
2410 (define-public julia-lazyarrays
2411 (package
2412 (name "julia-lazyarrays")
2413 (version "0.22.2")
2414 (source
2415 (origin
2416 (method git-fetch)
2417 (uri (git-reference
2418 (url "https://github.com/JuliaArrays/LazyArrays.jl")
2419 (commit (string-append "v" version))))
2420 (file-name (git-file-name name version))
2421 (sha256
2422 (base32 "17rhlrmgfvdw8w62pg32ikr9j4xy2ylr7mx7ar0hnpzryv929rp5"))))
2423 (build-system julia-build-system)
2424 (propagated-inputs
2425 `(("julia-arraylayouts" ,julia-arraylayouts)
2426 ("julia-fillarrays" ,julia-fillarrays)
2427 ("julia-macrotools" ,julia-macrotools)
2428 ("julia-matrixfactorizations" ,julia-matrixfactorizations)
2429 ("julia-staticarrays" ,julia-staticarrays)))
2430 (native-inputs
2431 `(("julia-tracker" ,julia-tracker)))
2432 (home-page "https://github.com/JuliaArrays/LazyArrays.jl")
2433 (synopsis "Lazy arrays and linear algebra")
2434 (description "This package supports lazy analogues of array operations like
2435 @code{vcat}, @code{hcat}, and multiplication. This helps with the
2436 implementation of matrix-free methods for iterative solvers.")
2437 (license license:expat)))
2438
2439 (define-public julia-logexpfunctions
2440 (package
2441 (name "julia-logexpfunctions")
2442 (version "0.2.4")
2443 (source
2444 (origin
2445 (method git-fetch)
2446 (uri (git-reference
2447 (url "https://github.com/JuliaStats/LogExpFunctions.jl")
2448 (commit (string-append "v" version))))
2449 (file-name (git-file-name name version))
2450 (sha256
2451 (base32 "0rvms3mmq8a1viqlyzdgs2ccddcy6j0c677dlb8m5nk6hkiwr16n"))))
2452 (build-system julia-build-system)
2453 (propagated-inputs
2454 `(("julia-docstringextensions" ,julia-docstringextensions)))
2455 (native-inputs
2456 `(("julia-offsetarrays" ,julia-offsetarrays)))
2457 (home-page "https://github.com/JuliaStats/LogExpFunctions.jl")
2458 (synopsis "Special functions based on @code{log} and @code{exp}")
2459 (description "Various special functions based on log and exp moved from
2460 @code{StatsFuns.jl} into a separate package, to minimize dependencies. These
2461 functions only use native Julia code, so there is no need to depend on
2462 @code{librmath} or similar libraries.")
2463 (license license:expat)))
2464
2465 (define-public julia-macrotools
2466 (package
2467 (name "julia-macrotools")
2468 (version "0.5.6")
2469 (source
2470 (origin
2471 (method git-fetch)
2472 (uri (git-reference
2473 (url "https://github.com/FluxML/MacroTools.jl")
2474 (commit (string-append "v" version))))
2475 (file-name (git-file-name name version))
2476 (sha256
2477 (base32 "0k4z2hyasd9cwxf4l61zk3w4ajs44k69wx6z1ghdn8f5p8xy217f"))))
2478 (build-system julia-build-system)
2479 (home-page "https://fluxml.ai/MacroTools.jl")
2480 (synopsis "Tools for working with Julia code and expressions")
2481 (description "This library provides tools for working with Julia code and
2482 expressions. This includes a template-matching system and code-walking tools
2483 that let you do deep transformations of code.")
2484 (license license:expat)))
2485
2486 (define-public julia-mappedarrays
2487 (package
2488 (name "julia-mappedarrays")
2489 (version "0.4.0")
2490 (source
2491 (origin
2492 (method git-fetch)
2493 (uri (git-reference
2494 (url "https://github.com/JuliaArrays/MappedArrays.jl")
2495 (commit (string-append "v" version))))
2496 (file-name (git-file-name name version))
2497 (sha256
2498 (base32 "0l5adird8m1cmnsxwhzi5hcr7q9bm1rf7a6018zc7kcn2yxdshy3"))))
2499 (build-system julia-build-system)
2500 (propagated-inputs
2501 `(("julia-fixedpointnumbers" ,julia-fixedpointnumbers)))
2502 (native-inputs
2503 `(("julia-colortypes" ,julia-colortypes)
2504 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
2505 ("julia-offsetarrays" ,julia-offsetarrays)))
2506 (home-page "https://github.com/JuliaArrays/MappedArrays.jl")
2507 (synopsis "Lazy in-place transformations of arrays")
2508 (description "This package implements \"lazy\" in-place elementwise
2509 transformations of arrays for the Julia programming language. Explicitly, it
2510 provides a \"view\" M of an array A so that @code{M[i] = f(A[i])} for a
2511 specified (but arbitrary) function f, without ever having to compute M
2512 explicitly (in the sense of allocating storage for M). The name of the package
2513 comes from the fact that @code{M == map(f, A)}.")
2514 (license license:expat)))
2515
2516 (define-public julia-matrixfactorizations
2517 (package
2518 (name "julia-matrixfactorizations")
2519 (version "0.8.4")
2520 (source
2521 (origin
2522 (method git-fetch)
2523 (uri (git-reference
2524 (url "https://github.com/JuliaMatrices/MatrixFactorizations.jl")
2525 (commit (string-append "v" version))))
2526 (file-name (git-file-name name version))
2527 (sha256
2528 (base32 "15zvcv2l4iqmjpnqjyx2kry7a85p652nbjy9pj3wq0piksqcz4jb"))))
2529 (build-system julia-build-system)
2530 (arguments
2531 `(#:phases
2532 (modify-phases %standard-phases
2533 (add-after 'unpack 'skip-failing-test
2534 (lambda _
2535 ;; Tests with math functions are hard.
2536 (substitute* "test/test_ul.jl"
2537 (("@test @inferred\\(logdet") "@test @test_nowarn(logdet")
2538 ;; Also skip the REPL test.
2539 (("test String") "test_nowarn String"))
2540 #t)))))
2541 (propagated-inputs
2542 `(("julia-arraylayouts" ,julia-arraylayouts)))
2543 (home-page "https://github.com/JuliaMatrices/MatrixFactorizations.jl")
2544 (synopsis "Julia package to contain non-standard matrix factorizations")
2545 (description "A Julia package to contain non-standard matrix factorizations.
2546 At the moment it implements the QL, RQ, and UL factorizations, a combined
2547 Cholesky factorization with inverse, and polar decompositions. In the future it
2548 may include other factorizations such as the LQ factorization.")
2549 (license license:expat)))
2550
2551 (define-public julia-mbedtls
2552 (package
2553 (name "julia-mbedtls")
2554 (version "1.0.3")
2555 (source
2556 (origin
2557 (method git-fetch)
2558 (uri (git-reference
2559 (url "https://github.com/JuliaLang/MbedTLS.jl")
2560 (commit (string-append "v" version))))
2561 (file-name (git-file-name name version))
2562 (sha256
2563 (base32 "0zjzf2r57l24n3k0gcqkvx3izwn5827iv9ak0lqix0aa5967wvfb"))))
2564 (build-system julia-build-system)
2565 (arguments
2566 `(#:phases
2567 (modify-phases %standard-phases
2568 (add-before 'install 'disable-network-tests
2569 ;; Tries to connect to httpbin.org
2570 (lambda _
2571 (substitute* "test/runtests.jl"
2572 (("testhost =") "return #"))
2573 #t)))))
2574 (propagated-inputs `(("julia-mbedtls-jll" ,julia-mbedtls-jll)))
2575 (home-page "https://github.com/JuliaLang/MbedTLS.jl")
2576 (synopsis "Apache's mbed TLS library wrapper")
2577 (description "@code{MbedTLS.jl} provides a wrapper around the @code{mbed
2578 TLS} and cryptography C library for Julia.")
2579 (license license:expat)))
2580
2581 (define-public julia-measurements
2582 (package
2583 (name "julia-measurements")
2584 (version "2.6.0")
2585 (source
2586 (origin
2587 (method git-fetch)
2588 (uri (git-reference
2589 (url "https://github.com/JuliaPhysics/Measurements.jl")
2590 (commit (string-append "v" version))))
2591 (file-name (git-file-name name version))
2592 (sha256
2593 (base32 "05p3f0gr4sv4maq8cix5fi8ldq0zagswqsd43xn6fhy046f936mz"))))
2594 (build-system julia-build-system)
2595 (propagated-inputs
2596 `(("julia-calculus" ,julia-calculus)
2597 ("julia-recipesbase" ,julia-recipesbase)
2598 ("julia-requires" ,julia-requires)))
2599 (native-inputs
2600 `(("julia-quadgk" ,julia-quadgk)
2601 ("julia-specialfunctions" ,julia-specialfunctions)
2602 ("julia-unitful" ,julia-unitful)))
2603 (home-page "https://juliaphysics.github.io/Measurements.jl/stable/")
2604 (synopsis "Error propagation calculator and library")
2605 (description "@code{Measurements.jl} is an error propagation calculator and
2606 library for physical measurements. It supports real and complex numbers with
2607 uncertainty, arbitrary precision calculations, operations with arrays, and
2608 numerical integration. The linear error propagation theory is employed to
2609 propagate the errors.")
2610 (license license:expat)))
2611
2612 (define-public julia-measures
2613 (package
2614 (name "julia-measures")
2615 (version "0.3.1")
2616 (source
2617 (origin
2618 (method git-fetch)
2619 (uri (git-reference
2620 (url "https://github.com/JuliaGraphics/Measures.jl")
2621 (commit (string-append "v" version))))
2622 (file-name (git-file-name name version))
2623 (sha256
2624 (base32 "0j34psrdijnqqn9zv0r2sknr1p9q0mmbjvjhmjra37bb5fh2gk8l"))))
2625 (build-system julia-build-system)
2626 (home-page "https://github.com/JuliaGraphics/Measures.jl")
2627 (synopsis "Unified measure and coordinates types")
2628 (description "This library generalizes and unifies the notion of measures
2629 used in Compose, Compose3D, and Escher. It allows building up and representing
2630 expressions involving differing types of units that are then evaluated,
2631 resolving them into absolute units.")
2632 (license license:expat)))
2633
2634 (define-public julia-missings
2635 (package
2636 (name "julia-missings")
2637 (version "1.0.2")
2638 (source
2639 (origin
2640 (method git-fetch)
2641 (uri (git-reference
2642 (url "https://github.com/JuliaData/Missings.jl")
2643 (commit (string-append "v" version))))
2644 (file-name (git-file-name name version))
2645 (sha256
2646 (base32 "1k481rm5lahmjyh34j177d4n10svgr0wm7ps5m3ar3xx6nr26ad5"))))
2647 (build-system julia-build-system)
2648 (propagated-inputs
2649 `(("julia-dataapi" ,julia-dataapi)))
2650 (home-page "https://github.com/JuliaData/Missings.jl")
2651 (synopsis "Additional missing value support for Julia")
2652 (description "This package provides additional functionality for working
2653 with @code{missing} values in Julia.")
2654 (license license:expat)))
2655
2656 (define-public julia-mlstyle
2657 (package
2658 (name "julia-mlstyle")
2659 (version "0.4.10")
2660 (source
2661 (origin
2662 (method git-fetch)
2663 (uri (git-reference
2664 (url "https://github.com/thautwarm/MLStyle.jl")
2665 (commit (string-append "v" version))))
2666 (file-name (git-file-name name version))
2667 (sha256
2668 (base32 "0h1cd7cr4c4cnpqyj3180113gdbvcc047lqphp8a8gq5smp3c059"))))
2669 (build-system julia-build-system)
2670 (native-inputs
2671 `(("julia-datastructures" ,julia-datastructures)))
2672 (home-page "https://thautwarm.github.io/MLStyle.jl/latest/")
2673 (synopsis "Julia functional programming infrastructures")
2674 (description "This package provides consistent and extensible functional
2675 programming infrastructures, and metaprogramming facilities.")
2676 (license license:expat)))
2677
2678 (define-public julia-mocking
2679 (package
2680 (name "julia-mocking")
2681 (version "0.7.3")
2682 (source
2683 (origin
2684 (method git-fetch)
2685 (uri (git-reference
2686 (url "https://github.com/invenia/Mocking.jl")
2687 (commit (string-append "v" version))))
2688 (file-name (git-file-name name version))
2689 (sha256
2690 (base32 "1cg2is83bjmrchmmxcgx57k8c9b9vlamrw38v4fdhbb6d4six5cg"))))
2691 (build-system julia-build-system)
2692 (propagated-inputs
2693 `(("julia-compat" ,julia-compat)
2694 ("julia-exprtools" ,julia-exprtools)))
2695 (home-page "https://github.com/invenia/Mocking.jl")
2696 (synopsis "Overload Julia function calls")
2697 (description "The purpose of this package is to allow Julia function calls
2698 to be temporarily overloaded for the purpose of testing.")
2699 (license license:expat)))
2700
2701 (define-public julia-mosaicviews
2702 (package
2703 (name "julia-mosaicviews")
2704 (version "0.3.3")
2705 (source
2706 (origin
2707 (method git-fetch)
2708 (uri (git-reference
2709 (url "https://github.com/JuliaArrays/MosaicViews.jl")
2710 (commit (string-append "v" version))))
2711 (file-name (git-file-name name version))
2712 (sha256
2713 (base32 "04fgxghyb7n2ji76xkb1r1fjhzsdbgmp5wsfyyn3yjcsdqbyp8pz"))))
2714 (build-system julia-build-system)
2715 (arguments
2716 `(#:tests? #f)) ; Cycle with ImageCore.jl
2717 (propagated-inputs
2718 `(("julia-mappedarrays" ,julia-mappedarrays)
2719 ("julia-paddedviews" ,julia-paddedviews)
2720 ("julia-stackviews" ,julia-stackviews)))
2721 ;(native-inputs
2722 ; `(("julia-colorvectorspace" ,julia-colorvectorspace)
2723 ; ("julia-imagecore" ,julia-imagecore)))
2724 (home-page "https://github.com/JuliaArrays/MosaicViews.jl")
2725 (synopsis
2726 "Lazily view a 3D or 4D array as an expanded 2D array as a matrix of slices")
2727 (description "When visualizing images, it is not uncommon to provide a 2D
2728 view of different image sources. For example, comparing multiple images of
2729 different sizes, getting a preview of machine learning dataset. This package
2730 aims to provide easy-to-use tools for such tasks.")
2731 (license license:expat)))
2732
2733 (define-public julia-msgpack
2734 (package
2735 (name "julia-msgpack")
2736 (version "1.1.0")
2737 (source
2738 (origin
2739 (method git-fetch)
2740 (uri (git-reference
2741 (url "https://github.com/JuliaIO/MsgPack.jl")
2742 (commit (string-append "v" version))))
2743 (file-name (git-file-name name version))
2744 (sha256
2745 (base32 "1layiqjf9si38pfdcszppgcy4zbfqgld7jlw8x645sm9b17b19fg"))))
2746 (build-system julia-build-system)
2747 (home-page "https://github.com/JuliaIO/MsgPack.jl")
2748 (synopsis "Julia MsgPack implementation")
2749 (description "@code{MsgPack.jl} is a MessagePack implementation in pure
2750 Julia, with type-driven, overloadable packing/unpacking functionality.")
2751 (license license:expat)))
2752
2753 (define-public julia-mutablearithmetics
2754 (package
2755 (name "julia-mutablearithmetics")
2756 (version "0.2.20")
2757 (source
2758 (origin
2759 (method git-fetch)
2760 (uri (git-reference
2761 (url "https://github.com/jump-dev/MutableArithmetics.jl")
2762 (commit (string-append "v" version))))
2763 (file-name (git-file-name name version))
2764 (sha256
2765 (base32 "1isyj8h4nx96cr6892d154v8pw1nhr7mjyz5bd6ffr2mkzb2bq4f"))))
2766 (build-system julia-build-system)
2767 (propagated-inputs
2768 `(("julia-offsetarrays" ,julia-offsetarrays)))
2769 (home-page "https://github.com/jump-dev/MutableArithmetics.jl")
2770 (synopsis "Interface for arithmetics on mutable types in Julia")
2771 (description "MutableArithmetics is a Julia package which allows:
2772 @itemize
2773 @item mutable types to implement mutable arithmetics
2774 @item algorithms that could exploit mutable arithmetics to exploit them while
2775 still being completely generic
2776 @end itemize")
2777 (license license:mpl2.0)))
2778
2779 (define-public julia-nanmath
2780 (package
2781 (name "julia-nanmath")
2782 (version "0.3.5")
2783 (source
2784 (origin
2785 (method git-fetch)
2786 (uri (git-reference
2787 (url "https://github.com/mlubin/NaNMath.jl")
2788 (commit (string-append "v" version))))
2789 (file-name (git-file-name name version))
2790 (sha256
2791 (base32 "1hczhz00qj99w63vp627kwk02l2sr2qmzc2rkwwkdwvzy670p25q"))))
2792 (build-system julia-build-system)
2793 (home-page "https://github.com/mlubin/NaNMath.jl")
2794 (synopsis "Implementations of basic math functions")
2795 (description "Implementations of basic math functions which return
2796 @code{NaN} instead of throwing a @code{DomainError}.")
2797 (license license:expat)))
2798
2799 (define-public julia-nlsolversbase
2800 (package
2801 (name "julia-nlsolversbase")
2802 (version "7.8.0")
2803 (source
2804 (origin
2805 (method git-fetch)
2806 (uri (git-reference
2807 (url "https://github.com/JuliaNLSolvers/NLSolversBase.jl")
2808 (commit (string-append "v" version))))
2809 (file-name (git-file-name name version))
2810 (sha256
2811 (base32 "0n8qh5a2ghjx1j70zxn0hmh8gzpa46kmjg8di879y9974bfk0f98"))))
2812 (build-system julia-build-system)
2813 (propagated-inputs
2814 `(("julia-diffresults" ,julia-diffresults)
2815 ("julia-finitediff" ,julia-finitediff)
2816 ("julia-forwarddiff" ,julia-forwarddiff)))
2817 (native-inputs
2818 `(("julia-optimtestproblems" ,julia-optimtestproblems)
2819 ("julia-recursivearraytools" ,julia-recursivearraytools)))
2820 (home-page "https://github.com/JuliaNLSolvers/NLSolversBase.jl")
2821 (synopsis "Optimization and equation solver software in JuliaNLSolvers")
2822 (description "This package aims at establishing common ground for Optim.jl,
2823 LineSearches.jl, and NLsolve.jl. The common ground is mainly the types used to
2824 hold objective related callables, information about the objectives, and an
2825 interface to interact with these types.")
2826 (license license:expat)))
2827
2828 (define-public julia-nnlib
2829 (package
2830 (name "julia-nnlib")
2831 (version "0.7.29")
2832 (source
2833 (origin
2834 (method git-fetch)
2835 (uri (git-reference
2836 (url "https://github.com/FluxML/NNlib.jl")
2837 (commit (string-append "v" version))))
2838 (file-name (git-file-name name version))
2839 (sha256
2840 (base32 "16vn5w5274kcywh1xp0zqjk5q10xrk125aznz5av6wifwrvghk8s"))))
2841 (build-system julia-build-system)
2842 (arguments
2843 `(#:phases
2844 (modify-phases %standard-phases
2845 (add-after 'unpack 'skip-cuda-tests
2846 (lambda _
2847 (substitute* "test/runtests.jl"
2848 (("using CUDA") "")
2849 (("&& CUDA\\.functional\\(\\)") ""))
2850 (setenv "NNLIB_TEST_CUDA" "false"))))))
2851 (propagated-inputs
2852 `(("julia-adapt" ,julia-adapt)
2853 ("julia-chainrulescore" ,julia-chainrulescore)
2854 ("julia-requires" ,julia-requires)))
2855 (native-inputs
2856 `(("julia-chainrulestestutils" ,julia-chainrulestestutils)
2857 ("julia-stablerngs" ,julia-stablerngs)
2858 ("julia-zygote" ,julia-zygote)))
2859 (home-page "https://github.com/FluxML/NNlib.jl")
2860 (synopsis "Neural Network primitives with multiple backends")
2861 (description "This package will provide a library of functions useful for
2862 machine learning, such as softmax, sigmoid, convolutions and pooling. It
2863 doesn't provide any other \"high-level\" functionality like layers or AD.")
2864 (license license:expat)))
2865
2866 (define-public julia-optimtestproblems
2867 (package
2868 (name "julia-optimtestproblems")
2869 (version "2.0.2")
2870 (source
2871 (origin
2872 (method git-fetch)
2873 (uri (git-reference
2874 (url "https://github.com/JuliaNLSolvers/OptimTestProblems.jl")
2875 (commit (string-append "v" version))))
2876 (file-name (git-file-name name version))
2877 (sha256
2878 (base32 "10h47x5ws42pkqjccimaz0yxfvz41w0yazq6inamfk4lg5g2g3d9"))))
2879 (build-system julia-build-system)
2880 (arguments
2881 `(#:julia-package-name "OptimTestProblems"))
2882 (home-page "https://github.com/JuliaNLSolvers/OptimTestProblems.jl")
2883 (synopsis "Collection of optimization test problems")
2884 (description "The purpose of this package is to provide test problems for
2885 JuliaNLSolvers packages.")
2886 (license license:expat)))
2887
2888 (define-public julia-orderedcollections
2889 (package
2890 (name "julia-orderedcollections")
2891 (version "1.4.1")
2892 (source
2893 (origin
2894 (method git-fetch)
2895 (uri (git-reference
2896 (url "https://github.com/JuliaCollections/OrderedCollections.jl")
2897 (commit (string-append "v" version))))
2898 (file-name (git-file-name name version))
2899 (sha256
2900 (base32 "0jaxcmvkp8zpqrz101yikdigz90s70i7in5wn8kybwzf0na3lhwf"))))
2901 (build-system julia-build-system)
2902 (home-page "https://github.com/JuliaCollections/OrderedCollections.jl")
2903 (synopsis "Associative containers that preserve insertion order")
2904 (description "This package implements @code{OrderedDicts} and
2905 @code{OrderedSets}, which are similar to containers in base Julia. However,
2906 during iteration the @code{Ordered*} containers return items in the order in
2907 which they were added to the collection.")
2908 (license license:expat)))
2909
2910 (define-public julia-offsetarrays
2911 (package
2912 (name "julia-offsetarrays")
2913 (version "1.10.3")
2914 (source
2915 (origin
2916 (method git-fetch)
2917 (uri (git-reference
2918 (url "https://github.com/JuliaArrays/OffsetArrays.jl")
2919 (commit (string-append "v" version))))
2920 (file-name (git-file-name name version))
2921 (sha256
2922 (base32 "0j5a8ar8yc0j9h87gwfyrcqm23wpyv5yv5gn8vzilpg4vr0fiasc"))))
2923 (build-system julia-build-system)
2924 (propagated-inputs
2925 `(("julia-adapt" ,julia-adapt)))
2926 ;; CatIndices depends on OffsetArrays, introducing a recursive dependency
2927 (arguments '(#:tests? #f))
2928 (home-page "https://juliaarrays.github.io/OffsetArrays.jl/stable/")
2929 (synopsis "Fortran-like arrays with arbitrary, zero or negative indices")
2930 (description "@code{OffsetArrays.jl} provides Julia users with arrays that
2931 have arbitrary indices, similar to those found in some other programming
2932 languages like Fortran.")
2933 (license license:expat)))
2934
2935 (define-public julia-paddedviews
2936 (package
2937 (name "julia-paddedviews")
2938 (version "0.5.8")
2939 (source
2940 (origin
2941 (method git-fetch)
2942 (uri (git-reference
2943 (url "https://github.com/JuliaArrays/PaddedViews.jl")
2944 (commit (string-append "v" version))))
2945 (file-name (git-file-name name version))
2946 (sha256
2947 (base32 "0ran2vj6ahlzib0g77y7g0jhavy3k9s2mqq23ybpgp9z677wf26h"))))
2948 (build-system julia-build-system)
2949 (arguments
2950 '(#:tests? #f)) ;require Documenter, not packaged yet
2951 (propagated-inputs
2952 `(("julia-offsetarrays" ,julia-offsetarrays)))
2953 (home-page "https://github.com/JuliaArrays/PaddedViews.jl")
2954 (synopsis "Add virtual padding to the edges of an array")
2955 (description "@code{PaddedViews} provides a simple wrapper type,
2956 @code{PaddedView}, to add \"virtual\" padding to any array without copying data.
2957 Edge values not specified by the array are assigned a @code{fillvalue}.
2958 Multiple arrays may be \"promoted\" to have common indices using the
2959 @code{paddedviews} function.")
2960 (license license:expat)))
2961
2962 (define-public julia-parameters
2963 (package
2964 (name "julia-parameters")
2965 (version "0.12.2")
2966 (source
2967 (origin
2968 (method git-fetch)
2969 (uri (git-reference
2970 (url "https://github.com/mauro3/Parameters.jl")
2971 (commit (string-append "v" version))))
2972 (file-name (git-file-name name version))
2973 (sha256
2974 (base32 "0b8lawi7kcws4axfsdf023gyxca15irl648ciyi1kw3wghz3pfi2"))))
2975 (build-system julia-build-system)
2976 (propagated-inputs
2977 `(("julia-orderedcollections" ,julia-orderedcollections)
2978 ("julia-unpack" ,julia-unpack)))
2979 (home-page "https://github.com/mauro3/Parameters.jl")
2980 (synopsis "Numerical-model parameter helpers")
2981 (description "This package contains types with default field values, keyword
2982 constructors and (un-)pack macros. Keyword functions can be slow in Julia,
2983 however, the normal positional constructor is also provided and could be used in
2984 performance critical code.")
2985 (license license:expat)))
2986
2987 (define-public julia-parsers
2988 (package
2989 (name "julia-parsers")
2990 (version "1.1.0")
2991 (source
2992 (origin
2993 (method git-fetch)
2994 (uri (git-reference
2995 (url "https://github.com/JuliaData/Parsers.jl")
2996 (commit (string-append "v" version))))
2997 (file-name (git-file-name name version))
2998 (sha256
2999 (base32 "1gz3drd5334xrbx2ms33hiifkd0q1in4ywc92xvrkq3xgzdjqjdk"))))
3000 (build-system julia-build-system)
3001 (home-page "https://github.com/JuliaData/Parsers.jl")
3002 (synopsis "Fast parsing machinery for basic types in Julia")
3003 (description "@code{Parsers.jl} is a collection of type parsers and
3004 utilities for Julia.")
3005 (license license:expat)))
3006
3007 (define-public julia-pdmats
3008 (package
3009 (name "julia-pdmats")
3010 (version "0.11.1")
3011 (source
3012 (origin
3013 (method git-fetch)
3014 (uri (git-reference
3015 (url "https://github.com/JuliaStats/PDMats.jl")
3016 (commit (string-append "v" version))))
3017 (file-name (git-file-name name version))
3018 (sha256
3019 (base32 "0bc2gmpd30rkclvxyfnssjllp0pk63h0vvgr8862phm5ia83r8j0"))))
3020 (build-system julia-build-system)
3021 (home-page "https://github.com/JuliaStats/PDMats.jl")
3022 (synopsis
3023 "Uniform Interface for positive definite matrices of various structures")
3024 (description "PDMats.jl supports efficient computation on positive definite
3025 matrices of various structures. In particular, it provides uniform interfaces
3026 to use positive definite matrices of various structures for writing generic
3027 algorithms, while ensuring that the most efficient implementation is used in
3028 actual computation.")
3029 (license license:expat)))
3030
3031 (define-public julia-plotthemes
3032 (package
3033 (name "julia-plotthemes")
3034 (version "2.0.1")
3035 (source
3036 (origin
3037 (method git-fetch)
3038 (uri (git-reference
3039 (url "https://github.com/JuliaPlots/PlotThemes.jl")
3040 (commit (string-append "v" version))))
3041 (file-name (git-file-name name version))
3042 (sha256
3043 (base32 "1fd27w9z1vhz0d1bzrs5vcavpb5r5jviyh27d9c4ka37phz4xvmh"))))
3044 (build-system julia-build-system)
3045 (propagated-inputs
3046 `(("julia-plotutils" ,julia-plotutils)
3047 ("julia-requires" ,julia-requires)))
3048 (home-page "https://github.com/JuliaPlots/PlotThemes.jl")
3049 (synopsis "Themes for the Julia plotting package Plots.jl")
3050 (description
3051 "PlotThemes is a package to spice up the plots made with @code{Plots.jl}.")
3052 (license license:expat)))
3053
3054 (define-public julia-plotutils
3055 (package
3056 (name "julia-plotutils")
3057 (version "1.0.15")
3058 (source
3059 (origin
3060 (method git-fetch)
3061 (uri (git-reference
3062 (url "https://github.com/JuliaPlots/PlotUtils.jl")
3063 (commit (string-append "v" version))))
3064 (file-name (git-file-name name version))
3065 (sha256
3066 (base32 "12aw5gkkcfhpczv2w510k65w1j0hjnh825ihimi223v8plsi5105"))))
3067 (build-system julia-build-system)
3068 (propagated-inputs
3069 `(("julia-colors" ,julia-colors)
3070 ("julia-colorschemes" ,julia-colorschemes)
3071 ("julia-reexport" ,julia-reexport)))
3072 (native-inputs
3073 `(("julia-stablerngs" ,julia-stablerngs)))
3074 (home-page "https://github.com/JuliaPlots/PlotUtils.jl")
3075 (synopsis "Helper algorithms for building plotting components")
3076 (description "This package contains generic helper algorithms for building
3077 plotting components.")
3078 (license license:expat)))
3079
3080 (define-public julia-pooledarrays
3081 (package
3082 (name "julia-pooledarrays")
3083 (version "1.3.0")
3084 (source
3085 (origin
3086 (method git-fetch)
3087 (uri (git-reference
3088 (url "https://github.com/JuliaData/PooledArrays.jl")
3089 (commit (string-append "v" version))))
3090 (file-name (git-file-name name version))
3091 (sha256
3092 (base32 "0qdwvf1p5z6z0q4s4hn85ysd8wq47zy6hlzddc5ijvhk86ccqlrr"))))
3093 (build-system julia-build-system)
3094 (propagated-inputs
3095 `(("julia-dataapi" ,julia-dataapi)))
3096 (home-page "https://github.com/JuliaData/PooledArrays.jl")
3097 (synopsis "Pooled representation of arrays in Julia")
3098 (description "This package provides a pooled representation of arrays for
3099 purposes of compression when there are few unique elements.")
3100 (license license:expat)))
3101
3102 (define-public julia-positivefactorizations
3103 (package
3104 (name "julia-positivefactorizations")
3105 (version "0.2.4")
3106 (source
3107 (origin
3108 (method git-fetch)
3109 (uri (git-reference
3110 (url "https://github.com/timholy/PositiveFactorizations.jl")
3111 (commit (string-append "v" version))))
3112 (file-name (git-file-name name version))
3113 (sha256
3114 (base32 "1wxy6ak7f3hvibcgc8q88cgkf9zvi649mmjy1zlkx1qk80hgvz23"))))
3115 (build-system julia-build-system)
3116 (native-inputs
3117 `(("julia-forwarddiff" ,julia-forwarddiff)
3118 ("julia-reversediff" ,julia-reversediff)))
3119 (home-page "https://github.com/timholy/PositiveFactorizations.jl")
3120 (synopsis "Positive-definite \"approximations\" to matrices")
3121 (description "@code{PositiveFactorizations} is a package for computing a
3122 positive definite matrix decomposition (factorization) from an arbitrary
3123 symmetric input. The motivating application is optimization (Newton or
3124 quasi-Newton methods), in which the canonical search direction -H/g (H being the
3125 Hessian and g the gradient) may not be a descent direction if H is not positive
3126 definite.")
3127 (license license:expat)))
3128
3129 (define-public julia-preferences
3130 (package
3131 (name "julia-preferences")
3132 (version "1.2.2")
3133 (source
3134 (origin
3135 (method git-fetch)
3136 (uri (git-reference
3137 (url "https://github.com/JuliaPackaging/Preferences.jl")
3138 (commit (string-append "v" version))))
3139 (file-name (git-file-name name version))
3140 (sha256
3141 (base32 "1cail43iqzbi6m9v6981rhz47zf2lcvhs5ds5gdqvc9nx5frghxq"))))
3142 (build-system julia-build-system)
3143 (arguments
3144 `(#:tests? #f)) ; Tests try to mkdir /.julia
3145 (home-page "https://github.com/JuliaPackaging/Preferences.jl")
3146 (synopsis "Store configuration switches to TOML files")
3147 (description "The @code{Preferences} package provides an integrated way for
3148 packages to store configuration switches to persistent TOML files, and use those
3149 pieces of information at both run time and compile time in Julia. This enables
3150 the user to modify the behavior of a package, and have that choice reflected in
3151 everything from run time algorithm choice to code generation at compile time.")
3152 (license license:expat)))
3153
3154 (define-public julia-prettytables
3155 (package
3156 (name "julia-prettytables")
3157 (version "1.0.1")
3158 (source
3159 (origin
3160 (method git-fetch)
3161 (uri (git-reference
3162 (url "https://github.com/ronisbr/PrettyTables.jl")
3163 (commit (string-append "v" version))))
3164 (file-name (git-file-name name version))
3165 (sha256
3166 (base32 "1d1sd87kkwbar3l608h0adzws42cwdrmp1idxx7an6mfqcsdrijw"))))
3167 (build-system julia-build-system)
3168 (arguments
3169 `(#:phases
3170 (modify-phases %standard-phases
3171 (add-after 'unpack 'skip-color-tests
3172 (lambda _
3173 (substitute* "test/text_backend.jl"
3174 ((".*colors\\.jl.*") ""))
3175 #t)))))
3176 (propagated-inputs
3177 `(("julia-crayons" ,julia-crayons)
3178 ("julia-formatting" ,julia-formatting)
3179 ("julia-reexport" ,julia-reexport)
3180 ("julia-tables" ,julia-tables)))
3181 (home-page "https://github.com/ronisbr/PrettyTables.jl")
3182 (synopsis "Print data in formatted tables")
3183 (description "This package has the purpose to print data in matrices in a
3184 human-readable format.")
3185 (license license:expat)))
3186
3187 (define-public julia-pycall
3188 (package
3189 (name "julia-pycall")
3190 (version "1.92.3")
3191 (source
3192 (origin
3193 (method git-fetch)
3194 (uri (git-reference
3195 (url "https://github.com/JuliaPy/PyCall.jl")
3196 (commit (string-append "v" version))))
3197 (file-name (git-file-name name version))
3198 (sha256
3199 (base32
3200 "07r99ni6nkxpyrp3wsb5qg4jxz7i2r08dyqbiffy2zm3g0bn88jq"))))
3201 (build-system julia-build-system)
3202 (arguments
3203 `(#:imported-modules ((guix build python-build-system)
3204 ,@%julia-build-system-modules)
3205 #:modules ((guix build julia-build-system)
3206 (guix build utils)
3207 ((guix build python-build-system) #:prefix python:))
3208 #:phases
3209 (modify-phases %standard-phases
3210 (add-after 'unpack 'remove-conda
3211 (lambda _
3212 (substitute* "Project.toml"
3213 ((".*Conda.*") ""))
3214 (substitute* (list "src/PyCall.jl"
3215 "test/runtests.jl")
3216 (("import Conda") ""))
3217 (substitute* "deps/depsutils.jl"
3218 (("Conda.PYTHONDIR") "\"/\""))
3219 #t))
3220 (add-after 'unpack 'set-python
3221 (lambda* (#:key inputs outputs #:allow-other-keys)
3222 (let ((python (assoc-ref inputs "python")))
3223 (setenv "PYCALL_JL_RUNTIME_PYTHON"
3224 (string-append python "/bin/python3"))
3225 (with-output-to-file "deps/deps.jl"
3226 (lambda _
3227 (format #t
3228 "const python = \"~a/bin/python3\"~@
3229 const pyprogramname = \"~a/bin/python3\"~@
3230 const libpython = \"~a/lib/libpython~a.so.1.0\"~@
3231 const PYTHONHOME = \"~a\"~@
3232 const pyversion_build = v\"~a\"~@
3233 const conda = false~%"
3234 python
3235 python
3236 python
3237 (python:python-version python)
3238 python
3239 ,(package-version python))))
3240 #t)))
3241 (add-before 'check 'pre-check
3242 (lambda _
3243 (setenv "CI" "true")
3244 (setenv "JULIA_PKGEVAL" "true")
3245 #t)))))
3246 (propagated-inputs
3247 `(("julia-macrotools" ,julia-macrotools)
3248 ("julia-versionparsing" ,julia-versionparsing)))
3249 (inputs
3250 `(("python" ,python)))
3251 (native-inputs
3252 `(("python-numpy" ,python-numpy)))
3253 (home-page "https://github.com/JuliaPy/PyCall.jl")
3254 (synopsis "Call Python functions from the Julia language")
3255 (description "This package provides the ability to directly call and fully
3256 interoperate with Python from the Julia language. You can import arbitrary
3257 Python modules from Julia, call Python functions (with automatic conversion of
3258 types between Julia and Python), define Python classes from Julia methods, and
3259 share large data structures between Julia and Python without copying them.")
3260 (license license:expat)))
3261
3262 (define-public julia-quadgk
3263 (package
3264 (name "julia-quadgk")
3265 (version "2.4.1")
3266 (source
3267 (origin
3268 (method git-fetch)
3269 (uri (git-reference
3270 (url "https://github.com/JuliaMath/QuadGK.jl")
3271 (commit (string-append "v" version))))
3272 (file-name (git-file-name name version))
3273 (sha256
3274 (base32 "1hy0629yai6xflgxaflk9764lzr1lzhlghimxk1aqi212q9c6n33"))))
3275 (build-system julia-build-system)
3276 (propagated-inputs
3277 `(("julia-datastructures" ,julia-datastructures)))
3278 (home-page "https://github.com/JuliaMath/QuadGK.jl")
3279 (synopsis "Adaptive 1d numerical Gauss–Kronrod integration")
3280 (description "This package provides support for one-dimensional numerical
3281 integration in Julia using adaptive Gauss-Kronrod quadrature. The code was
3282 originally part of Base Julia. It supports integration of arbitrary numeric
3283 types, including arbitrary precision (@code{BigFloat}), and even integration of
3284 arbitrary normed vector spaces (e.g. matrix-valued integrands).")
3285 (license license:expat)))
3286
3287 (define-public julia-quadmath
3288 (package
3289 (name "julia-quadmath")
3290 (version "0.5.5")
3291 (source
3292 (origin
3293 (method git-fetch)
3294 (uri (git-reference
3295 (url "https://github.com/JuliaMath/Quadmath.jl")
3296 (commit (string-append "v" version))))
3297 (file-name (git-file-name name version))
3298 (sha256
3299 (base32 "051biw4b9zni7cmh2f1yzifp1v8wazlfxrdz4p44lyd1wba6379w"))))
3300 (build-system julia-build-system)
3301 (arguments
3302 `(#:phases
3303 (modify-phases %standard-phases
3304 (add-after 'unpack 'hardcode-libmath-location
3305 (lambda* (#:key inputs #:allow-other-keys)
3306 (let ((gcclib (assoc-ref inputs "gcc:lib")))
3307 (substitute* "src/Quadmath.jl"
3308 (("libgcc_s.so.1" lib) (string-append gcclib "/lib/" lib))
3309 (("libquadmath.so.0" lib) (string-append gcclib "/lib/" lib)))
3310 #t))))))
3311 (propagated-inputs
3312 `(("julia-requires" ,julia-requires)))
3313 (inputs
3314 `(("gcc:lib" ,gcc "lib")))
3315 (native-inputs
3316 `(("julia-specialfunctions" ,julia-specialfunctions)))
3317 (home-page "https://github.com/JuliaMath/Quadmath.jl")
3318 (synopsis "Float128 and libquadmath for the Julia language")
3319 (description "This is a Julia interface to @code{libquadmath}, providing a
3320 @code{Float128} type corresponding to the IEEE754 binary128 floating point
3321 format.")
3322 (license license:expat)))
3323
3324 (define-public julia-quaternions
3325 (package
3326 (name "julia-quaternions")
3327 (version "0.4.2")
3328 (source
3329 (origin
3330 (method git-fetch)
3331 (uri (git-reference
3332 (url "https://github.com/JuliaGeometry/Quaternions.jl")
3333 (commit (string-append "v" version))))
3334 (file-name (git-file-name name version))
3335 (sha256
3336 (base32 "1zhynyvchc50hywws2jznpkwydr3njh8cv84d2ylyabhcwwmil9s"))))
3337 (build-system julia-build-system)
3338 (propagated-inputs
3339 `(("julia-dualnumbers" ,julia-dualnumbers)))
3340 (home-page "https://github.com/JuliaGeometry/Quaternions.jl")
3341 (synopsis "Quaternion and dual-quaternion functionality")
3342 (description "Quaternions are best known for their suitability as
3343 representations of 3D rotational orientation. They can also be viewed as an
3344 extension of complex numbers.")
3345 (license license:expat)))
3346
3347 (define-public julia-queryoperators
3348 (package
3349 (name "julia-queryoperators")
3350 (version "0.9.3")
3351 (source
3352 (origin
3353 (method git-fetch)
3354 (uri (git-reference
3355 (url "https://github.com/queryverse/QueryOperators.jl")
3356 (commit (string-append "v" version))))
3357 (file-name (git-file-name name version))
3358 (sha256
3359 (base32 "06zm4cbn3x49lbpgshhdfvvmgz066qkc8q0d57igm5p8bcp6js22"))))
3360 (build-system julia-build-system)
3361 (propagated-inputs
3362 `(("julia-datastructures" ,julia-datastructures)
3363 ("julia-iteratorinterfaceextensions" ,julia-iteratorinterfaceextensions)
3364 ("julia-tableshowutils" ,julia-tableshowutils)))
3365 (home-page "https://github.com/queryverse/QueryOperators.jl")
3366 (synopsis "Query operators for Julia")
3367 (description "This package contains the underlying query operators that are
3368 exposed to users in @code{Query.jl}.")
3369 (license license:expat)))
3370
3371 (define-public julia-rangearrays
3372 (package
3373 (name "julia-rangearrays")
3374 (version "0.3.2")
3375 (source
3376 (origin
3377 (method git-fetch)
3378 (uri (git-reference
3379 (url "https://github.com/JuliaArrays/RangeArrays.jl")
3380 (commit (string-append "v" version))))
3381 (file-name (git-file-name name version))
3382 (sha256
3383 (base32 "1ihzfyfq1xihkjcvn7xmzfbn6igzidb4fkzdcxwfr5qkvi52gnmg"))))
3384 (build-system julia-build-system)
3385 (home-page "https://github.com/JuliaArrays/RangeArrays.jl")
3386 (synopsis "Array data structures with autogenerated columns")
3387 (description "The goal of RangeArrays is to provide efficient and convenient
3388 array data structures where the columns of the arrays are generated (on the fly)
3389 by Ranges.")
3390 (license license:expat)))
3391
3392 (define-public julia-ratios
3393 (package
3394 (name "julia-ratios")
3395 (version "0.4.0")
3396 (source
3397 (origin
3398 (method git-fetch)
3399 (uri (git-reference
3400 (url "https://github.com/timholy/Ratios.jl")
3401 (commit (string-append "v" version))))
3402 (file-name (git-file-name name version))
3403 (sha256
3404 (base32 "1a4fd4jq4qjply29rkwg3m1clfndjsbckj1b1dab1bc35h2c6yxh"))))
3405 (build-system julia-build-system)
3406 (home-page "https://github.com/timholy/Ratios.jl")
3407 (synopsis "Faster Rational-like types for Julia")
3408 (description "This package provides types similar to Julia's @code{Rational}
3409 type, which make some sacrifices but have better computational performance.")
3410 (license license:expat)))
3411
3412 (define-public julia-recipesbase
3413 (package
3414 (name "julia-recipesbase")
3415 (version "1.1.1")
3416 (source
3417 (origin
3418 (method git-fetch)
3419 (uri (git-reference
3420 (url "https://github.com/JuliaPlots/RecipesBase.jl")
3421 (commit (string-append "v" version))))
3422 (file-name (git-file-name name version))
3423 (sha256
3424 (base32 "1b6m5rz6wprj30rwvlxz4r1jv5gl0ay0f52kfmy2w7lqly7zhap5"))))
3425 (build-system julia-build-system)
3426 (home-page "https://github.com/JuliaPlots/RecipesBase.jl")
3427 (synopsis "Define transformation recipes on user types")
3428 (description "This package implements handy macros @code{@@recipe} and
3429 @code{@@series} which will define a custom transformation and attach attributes
3430 for user types. Its design is an attempt to simplify and generalize the summary
3431 and display of types and data from external packages. With this package it is
3432 possible to describe visualization routines that can be used as components in
3433 more complex visualizations.")
3434 (license license:expat)))
3435
3436 (define-public julia-recipespipeline
3437 (package
3438 (name "julia-recipespipeline")
3439 (version "0.3.4")
3440 (source
3441 (origin
3442 (method git-fetch)
3443 (uri (git-reference
3444 (url "https://github.com/JuliaPlots/RecipesPipeline.jl")
3445 (commit (string-append "v" version))))
3446 (file-name (git-file-name name version))
3447 (sha256
3448 (base32 "0zq4bzxvq36zr0va6iip3x97mgq5b4fwza8avszx1ryfqm3lg1f7"))))
3449 (build-system julia-build-system)
3450 (arguments
3451 `(#:tests? #f)) ; Cycle with Plots.jl.
3452 (propagated-inputs
3453 `(("julia-nanmath" ,julia-nanmath)
3454 ("julia-plotutils" ,julia-plotutils)
3455 ("julia-recipesbase" ,julia-recipesbase)))
3456 (home-page "http://juliaplots.org/RecipesPipeline.jl/dev/")
3457 (synopsis "Utilities for processing recipes")
3458 (description "This package was factored out of @code{Plots.jl} to allow any
3459 other plotting package to use the recipe pipeline. In short, the extremely
3460 lightweight @code{RecipesBase.jl} package can be depended on by any package to
3461 define \"recipes\": plot specifications of user-defined types, as well as custom
3462 plot types. @code{RecipePipeline.jl} contains the machinery to translate these
3463 recipes to full specifications for a plot.")
3464 (license license:expat)))
3465
3466 (define-public julia-recursivearraytools
3467 (package
3468 (name "julia-recursivearraytools")
3469 (version "2.16.1")
3470 (source
3471 (origin
3472 (method git-fetch)
3473 (uri (git-reference
3474 (url "https://github.com/SciML/RecursiveArrayTools.jl")
3475 (commit (string-append "v" version))))
3476 (file-name (git-file-name name version))
3477 (sha256
3478 (base32 "0vx8ndxrii53na7jsc2lki47wfpi77rn3y2r6xhiysx1qwr14msf"))))
3479 (build-system julia-build-system)
3480 (arguments
3481 `(#:tests? #f)) ; Cycle with OrdinaryDiffEq.jl.
3482 (propagated-inputs
3483 `(("julia-arrayinterface" ,julia-arrayinterface)
3484 ("julia-chainrulescore" ,julia-chainrulescore)
3485 ("julia-docstringextensions" ,julia-docstringextensions)
3486 ("julia-recipesbase" ,julia-recipesbase)
3487 ("julia-requires" ,julia-requires)
3488 ("julia-staticarrays" ,julia-staticarrays)
3489 ("julia-zygoterules" ,julia-zygoterules)))
3490 ;(native-inputs
3491 ; `(("julia-forwarddiff" ,julia-forwarddiff)
3492 ; ("julia-nlsolve" ,julia-nlsolve)
3493 ; ("julia-ordinarydiffeq" ,julia-ordinarydiffeq)
3494 ; ("julia-structarrays" ,julia-structarrays)
3495 ; ("julia-zygote" ,julia-zygote)))
3496 (home-page "https://github.com/SciML/RecursiveArrayTools.jl")
3497 (synopsis "Tools for handling objects like arrays of arrays and deeper nestings")
3498 (description "@code{RecursiveArrayTools.jl} is a set of tools for dealing with
3499 recursive arrays like arrays of arrays.")
3500 (license license:expat)))
3501
3502 (define-public julia-reexport
3503 (package
3504 (name "julia-reexport")
3505 (version "1.2.2")
3506 (source
3507 (origin
3508 (method git-fetch)
3509 (uri (git-reference
3510 (url "https://github.com/simonster/Reexport.jl")
3511 (commit (string-append "v" version))))
3512 (file-name (git-file-name name version))
3513 (sha256
3514 (base32 "0inf5q6f01ncd5c5wm8mwzv2hs627ng6xlh8dhrlflp321hbamwf"))))
3515 (build-system julia-build-system)
3516 (home-page "https://github.com/simonster/Reexport.jl")
3517 (synopsis "Re-export modules and symbols")
3518 (description "This package provides tools to re-export modules and symbols.")
3519 (license license:expat)))
3520
3521 (define-public julia-referencetests
3522 (package
3523 (name "julia-referencetests")
3524 (version "0.9.7")
3525 (source
3526 (origin
3527 (method git-fetch)
3528 (uri (git-reference
3529 (url "https://github.com/JuliaTesting/ReferenceTests.jl")
3530 (commit (string-append "v" version))))
3531 (file-name (git-file-name name version))
3532 (sha256
3533 (base32 "0mm6bjhs8a21pippww6b08b5frmnb9m6k8xrszrwq9zhc879zpc9"))))
3534 (build-system julia-build-system)
3535 (arguments
3536 `(#:tests? #f)) ; Cycle with ImageCore.jl through ImageMagick.jl.
3537 (propagated-inputs
3538 `(("julia-deepdiffs" ,julia-deepdiffs)
3539 ("julia-distances" ,julia-distances)
3540 ("julia-fileio" ,julia-fileio)
3541 ("julia-imagecore" ,julia-imagecore)
3542 ("julia-imageinterminal" ,julia-imageinterminal)))
3543 ;(native-inputs
3544 ; `(("julia-csvfiles" ,julia-csvfiles)
3545 ; ("julia-dataframes" ,julia-dataframes)
3546 ; ("julia-gr" ,julia-gr)
3547 ; ("julia-imagemagick" ,julia-imagemagick)
3548 ; ("julia-imagetransformations" ,julia-imagetransformations)
3549 ; ("julia-plots" ,julia-plots)
3550 ; ("julia-testimages" ,julia-testimages)))
3551 (home-page "https://juliatesting.github.io/ReferenceTests.jl/latest/")
3552 (synopsis "Utility package for comparing data against reference files")
3553 (description "@code{ReferenceTests.jl} is a Julia package that adds a couple
3554 of additional macros to your testing toolbox. In particular, it focuses on
3555 functionality for testing values against reference files, which in turn the
3556 package can help create and update if need be.")
3557 (license license:expat)))
3558
3559 (define-public julia-requires
3560 (package
3561 (name "julia-requires")
3562 (version "1.1.3")
3563 (source
3564 (origin
3565 (method git-fetch)
3566 (uri (git-reference
3567 (url "https://github.com/JuliaPackaging/Requires.jl/")
3568 (commit (string-append "v" version))))
3569 (file-name (git-file-name name version))
3570 (sha256
3571 (base32 "03hyfy7c0ma45b0y756j76awi3az2ii4bz4s8cxm3xw9yy1z7b01"))))
3572 (build-system julia-build-system)
3573 (inputs ;required for test
3574 `(("julia-example" ,julia-example)))
3575 (propagated-inputs
3576 `(("julia-colors" ,julia-colors)))
3577 (home-page "https://github.com/JuliaPackaging/Requires.jl/")
3578 (synopsis "Faster package loader")
3579 (description "This package make loading packages faster, maybe. It
3580 supports specifying glue code in packages which will load automatically when
3581 another package is loaded, so that explicit dependencies (and long load times)
3582 can be avoided.")
3583 (license license:expat)))
3584
3585 (define-public julia-reversediff
3586 (package
3587 (name "julia-reversediff")
3588 (version "1.9.0")
3589 (source
3590 (origin
3591 (method git-fetch)
3592 (uri (git-reference
3593 (url "https://github.com/JuliaDiff/ReverseDiff.jl")
3594 (commit (string-append "v" version))))
3595 (file-name (git-file-name name version))
3596 (sha256
3597 (base32 "1wrr6sqj2xl9grkvdp88rw3manxy9vbx28zq2wssya5ns1xabsnl"))))
3598 (build-system julia-build-system)
3599 (propagated-inputs
3600 `(("julia-diffresults" ,julia-diffresults)
3601 ("julia-diffrules" ,julia-diffrules)
3602 ("julia-forwarddiff" ,julia-forwarddiff)
3603 ("julia-functionwrappers" ,julia-functionwrappers)
3604 ("julia-macrotools" ,julia-macrotools)
3605 ("julia-nanmath" ,julia-nanmath)
3606 ("julia-specialfunctions" ,julia-specialfunctions)
3607 ("julia-staticarrays" ,julia-staticarrays)))
3608 (native-inputs
3609 `(("julia-difftests" ,julia-difftests)
3610 ("julia-fillarrays" ,julia-fillarrays)))
3611 (home-page "https://github.com/JuliaDiff/ReverseDiff.jl")
3612 (synopsis "Reverse Mode Automatic Differentiation for Julia")
3613 (description "@code{ReverseDiff.jl} is a fast and compile-able tape-based
3614 reverse mode @acronym{AD, automatic differentiation}, that implements methods to
3615 take gradients, Jacobians, Hessians, and higher-order derivatives of native
3616 Julia functions (or any callable object, really).")
3617 (license license:expat)))
3618
3619 (define-public julia-richardson
3620 (package
3621 (name "julia-richardson")
3622 (version "1.4.0")
3623 (source
3624 (origin
3625 (method git-fetch)
3626 (uri (git-reference
3627 (url "https://github.com/JuliaMath/Richardson.jl")
3628 (commit (string-append "v" version))))
3629 (file-name (git-file-name name version))
3630 (sha256
3631 (base32 "06v9ii3d7hh41fsrfklaa8ap55z5s017f888mrd1c18y4fx9i4nx"))))
3632 (build-system julia-build-system)
3633 (home-page "https://juliapackages.com/p/richardson")
3634 (synopsis "Extrapolate function using Richardson method")
3635 (description "This package provides a function extrapolate that
3636 extrapolates a given function @code{f(x)} to @code{f(x0)}, evaluating @code{f}
3637 only at a geometric sequence of points @code{> x0} (or optionally @code{<
3638 x0}). The key algorithm is Richardson extrapolation using a Neville–Aitken
3639 tableau, which adaptively increases the degree of an extrapolation polynomial
3640 until convergence is achieved to a desired tolerance (or convergence stalls
3641 due to e.g. floating-point errors). This allows one to obtain @code{f(x0)} to
3642 high-order accuracy, assuming that @code{f(x0+h)} has a Taylor series or some
3643 other power series in @code{h}.")
3644 (license license:expat)))
3645
3646 (define-public julia-rotations
3647 ;; This is the first commit with support for julia-1.6.
3648 (let ((commit "b599102535bc3534252c76f3fd4cf521f4741788")
3649 (revision "1"))
3650 (package
3651 (name "julia-rotations")
3652 (version (git-version "1.0.2" revision commit))
3653 (source
3654 (origin
3655 (method git-fetch)
3656 (uri (git-reference
3657 (url "https://github.com/JuliaGeometry/Rotations.jl")
3658 (commit commit)))
3659 (file-name (git-file-name name version))
3660 (sha256
3661 (base32 "01wwqbdmj61yiz7rkmams4xg7gb9hbmg325173846ky4b9x1wb19"))))
3662 (build-system julia-build-system)
3663 (propagated-inputs
3664 `(("julia-staticarrays" ,julia-staticarrays)))
3665 (native-inputs
3666 `(("julia-benchmarktools" ,julia-benchmarktools)
3667 ("julia-forwarddiff" ,julia-forwarddiff)
3668 ("julia-unitful" ,julia-unitful)))
3669 (home-page "https://github.com/JuliaGeometry/Rotations.jl")
3670 (synopsis "Julia implementations for different rotation parameterisations")
3671 (description "This package implements various 3D rotation parameterizations
3672 and defines conversions between them. At their heart, each rotation
3673 parameterization is a 3×3 unitary (orthogonal) matrix (based on the
3674 @code{StaticArrays.jl} package), and acts to rotate a 3-vector about the origin
3675 through matrix-vector multiplication.")
3676 (license license:expat))))
3677
3678 (define-public julia-safetestsets
3679 ;; The only release tag is the first commit in the repository.
3680 (let ((commit "e553edc4c753344d38349304b9ff5483c3b8ff21")
3681 (revision "1"))
3682 (package
3683 (name "julia-safetestsets")
3684 (version (git-version "0.0.1" revision commit))
3685 (source
3686 (origin
3687 (method git-fetch)
3688 (uri (git-reference
3689 (url "https://github.com/YingboMa/SafeTestsets.jl")
3690 (commit commit)))
3691 (file-name (git-file-name name version))
3692 (sha256
3693 (base32 "1fb1dfdmiw2ggx60hf70954xlps0r48fcb3k3dvxynlz7ylphp96"))))
3694 (build-system julia-build-system)
3695 (arguments
3696 `(#:julia-package-name "SafeTestsets"))
3697 (native-inputs
3698 `(("julia-staticarrays" ,julia-staticarrays)))
3699 (home-page "https://github.com/YingboMa/SafeTestsets.jl")
3700 (synopsis "Julia's testset in a module")
3701 (description "This package contains the testset from Julia, packaged into
3702 a loadable module.")
3703 (license license:expat))))
3704
3705 (define-public julia-sass
3706 (package
3707 (name "julia-sass")
3708 (version "0.2.0")
3709 (source
3710 (origin
3711 (method git-fetch)
3712 (uri (git-reference
3713 (url "https://github.com/piever/Sass.jl")
3714 (commit (string-append "v" version))))
3715 (file-name (git-file-name name version))
3716 (sha256
3717 (base32 "0y7kkkj717h5cj659ssry89i5r64symr6pvhr6vv4qmaxrnjxj92"))))
3718 (build-system julia-build-system)
3719 (propagated-inputs
3720 `(("julia-libsass-jll" ,julia-libsass-jll)))
3721 (home-page "https://github.com/piever/Sass.jl")
3722 (synopsis "Compile scss and sass file to css")
3723 (description "This package provides a simple Julian API to use the
3724 @code{libsass} library to compile scss and sass files to css.")
3725 (license license:expat)))
3726
3727 (define-public julia-scratch
3728 (package
3729 (name "julia-scratch")
3730 (version "1.1.0")
3731 (source
3732 (origin
3733 (method git-fetch)
3734 (uri (git-reference
3735 (url "https://github.com/JuliaPackaging/Scratch.jl")
3736 (commit (string-append "v" version))))
3737 (file-name (git-file-name name version))
3738 (sha256
3739 (base32
3740 "09xni9rrrax17fxjz04j1b48mk9ffww5rcbagh66jklr89mrkqhx"))))
3741 (build-system julia-build-system)
3742 (arguments
3743 `(#:tests? #f)) ; Test suite tries to access the Julia package registry.
3744 (home-page "https://github.com/JuliaPackaging/Scratch.jl")
3745 (synopsis "Scratch spaces for all your persistent mutable data needs")
3746 (description "This repository implements the scratch spaces API for
3747 package-specific mutable containers of data. These spaces can contain datasets,
3748 text, binaries, or any other kind of data that would be convenient to store in
3749 a location specific to your package. As compared to Artifacts, these containers
3750 of data are mutable. Because the scratch space location on disk is not very
3751 user-friendly, scratch spaces should, in general, not be used for a storing
3752 files that the user must interact with through a file browser.")
3753 (license license:expat)))
3754
3755 (define-public julia-showoff
3756 (package
3757 (name "julia-showoff")
3758 (version "1.0.2")
3759 (source
3760 (origin
3761 (method git-fetch)
3762 (uri (git-reference
3763 (url "https://github.com/JuliaGraphics/Showoff.jl")
3764 (commit (string-append "v" version))))
3765 (file-name (git-file-name name version))
3766 (sha256
3767 (base32 "1g4hqvjjpwbrs7fnllyl5w66yj6qlvpvzpygym2nvf01m1ps6m53"))))
3768 (build-system julia-build-system)
3769 (home-page "https://github.com/JuliaGraphics/Showoff.jl")
3770 (synopsis "Nicely format an array of n things for tables and plots")
3771 (description "@code{Showoff} provides an interface for consistently
3772 formatting an array of n things, e.g. numbers, dates, unitful values. It's used
3773 in @code{Gadfly}, @code{Plots} and @code{Makie} to label axes and keys.")
3774 (license license:expat)))
3775
3776 (define-public julia-simpletraits
3777 (package
3778 (name "julia-simpletraits")
3779 (version "0.9.4")
3780 (source
3781 (origin
3782 (method git-fetch)
3783 (uri (git-reference
3784 (url "https://github.com/mauro3/SimpleTraits.jl")
3785 (commit (string-append "v" version))))
3786 (file-name (git-file-name name version))
3787 (sha256
3788 (base32 "1qvmkqcvhc2nilvkk36szccxdlcv9ls2i0ksxgl2yfjr3b3qlr05"))))
3789 (build-system julia-build-system)
3790 (propagated-inputs
3791 `(("julia-macrotools" ,julia-macrotools)))
3792 (home-page "https://github.com/mauro3/SimpleTraits.jl")
3793 (synopsis "Simple Traits for Julia")
3794 (description "This package provides a macro-based implementation of traits.
3795 The main idea behind traits is to group types outside the type-hierarchy and to
3796 make dispatch work with that grouping. The difference to Union-types is that
3797 types can be added to a trait after the creation of the trait, whereas Union
3798 types are fixed after creation.")
3799 (license license:expat)))
3800
3801 (define-public julia-sortingalgorithms
3802 (package
3803 (name "julia-sortingalgorithms")
3804 (version "1.0.1")
3805 (source
3806 (origin
3807 (method git-fetch)
3808 (uri (git-reference
3809 (url "https://github.com/JuliaCollections/SortingAlgorithms.jl")
3810 (commit (string-append "v" version))))
3811 (file-name (git-file-name name version))
3812 (sha256
3813 (base32 "173x77a80xnh99viqa3r7rgdaksvxaw8xyfqw09gwvp4p2zrxivb"))))
3814 (build-system julia-build-system)
3815 (arguments
3816 `(#:tests? #f)) ; cycle with StatsBase.jl
3817 (propagated-inputs
3818 `(("julia-datastructures" ,julia-datastructures)))
3819 ;(native-inputs
3820 ; `(("julia-statsbase" ,julia-statsbase)))
3821 (home-page "https://github.com/JuliaCollections/SortingAlgorithms.jl")
3822 (synopsis "Extra sorting algorithms extending Julia's sorting API")
3823 (description "The SortingAlgorithms package provides three sorting
3824 algorithms that can be used with Julia's standard sorting API: heapsort,
3825 timsort and radixsort.")
3826 (license license:expat)))
3827
3828 (define-public julia-specialfunctions
3829 (package
3830 (name "julia-specialfunctions")
3831 (version "1.6.0")
3832 (source
3833 (origin
3834 (method git-fetch)
3835 (uri (git-reference
3836 (url "https://github.com/JuliaMath/SpecialFunctions.jl")
3837 (commit (string-append "v" version))))
3838 (file-name (git-file-name name version))
3839 (sha256
3840 (base32 "0nfpnglx7zl9g20w2mgfkg17hcw9ri0shaq2rwplj0ij5pwz8yf0"))))
3841 (build-system julia-build-system)
3842 (inputs
3843 `(("julia-chainrulestestutils" ,julia-chainrulestestutils)))
3844 (propagated-inputs
3845 `(("julia-chainrulescore" ,julia-chainrulescore)
3846 ("julia-logexpfunctions" ,julia-logexpfunctions)
3847 ("julia-openspecfun-jll" ,julia-openspecfun-jll)))
3848 (home-page "https://github.com/JuliaMath/SpecialFunctions.jl")
3849 (synopsis "Special mathematical functions")
3850 (description "This package provides special mathematical functions,
3851 including Bessel, Hankel, Airy, error, Dawson, exponential (or sine and
3852 cosine) integrals, eta, zeta, digamma, inverse digamma, trigamma, and
3853 polygamma functions.")
3854 (license license:expat)))
3855
3856 (define-public julia-splitapplycombine
3857 (package
3858 (name "julia-splitapplycombine")
3859 (version "1.1.4")
3860 (source
3861 (origin
3862 (method git-fetch)
3863 (uri (git-reference
3864 (url "https://github.com/JuliaData/SplitApplyCombine.jl")
3865 (commit (string-append "v" version))))
3866 (file-name (git-file-name name version))
3867 (sha256
3868 (base32 "1qzaqvk57b0s5krzn8bxkzmr5kz6hi9dm3jbf2sl7z4vznsgbn9x"))))
3869 (build-system julia-build-system)
3870 (propagated-inputs
3871 `(("julia-dictionaries" ,julia-dictionaries)
3872 ("julia-indexing" ,julia-indexing)))
3873 (home-page "https://github.com/JuliaData/SplitApplyCombine.jl")
3874 (synopsis "Split-apply-combine strategies for Julia")
3875 (description "@code{SplitApplyCombine.jl} provides high-level, generic tools
3876 for manipulating data - particularly focussing on data in nested containers. An
3877 emphasis is placed on ensuring split-apply-combine strategies are easy to apply,
3878 and work reliably for arbitrary iterables and in an optimized way with the data
3879 structures included in Julia's standard library.")
3880 (license license:expat)))
3881
3882 (define-public julia-stablerngs
3883 (package
3884 (name "julia-stablerngs")
3885 (version "1.0.0")
3886 (source
3887 (origin
3888 (method git-fetch)
3889 (uri (git-reference
3890 (url "https://github.com/JuliaRandom/StableRNGs.jl")
3891 (commit (string-append "v" version))))
3892 (file-name (git-file-name name version))
3893 (sha256
3894 (base32 "1cw4wc38qbgmrrx0jjwjhynnarrzjkh0yyz242zj272brbci7p1r"))))
3895 (build-system julia-build-system)
3896 (home-page "https://github.com/JuliaRandom/StableRNGs.jl")
3897 (synopsis "Julia RNG with stable streams")
3898 (description "This package intends to provide a simple RNG with stable
3899 streams, suitable for tests in packages which need reproducible streams of
3900 random numbers across Julia versions. Indeed, the Julia RNGs provided by
3901 default are documented to have non-stable streams (which for example enables
3902 some performance improvements).")
3903 (license license:expat)))
3904
3905 (define-public julia-stackviews
3906 (package
3907 (name "julia-stackviews")
3908 (version "0.1.1")
3909 (source
3910 (origin
3911 (method git-fetch)
3912 (uri (git-reference
3913 (url "https://github.com/JuliaArrays/StackViews.jl")
3914 (commit (string-append "v" version))))
3915 (file-name (git-file-name name version))
3916 (sha256
3917 (base32 "1fwiaxdpx1z9dli3jr8kyraych0jbdiny3qklynf0r13px25r6i7"))))
3918 (build-system julia-build-system)
3919 (arguments
3920 `(#:tests? #f ; Documenter.jl not packaged yet
3921 #:phases
3922 (modify-phases %standard-phases
3923 (add-after 'unpack 'skip-doctest
3924 (lambda _
3925 (substitute* "test/runtests.jl"
3926 ((".*doctest.*") ""))
3927 #t)))))
3928 (propagated-inputs
3929 `(("julia-offsetarrays" ,julia-offsetarrays)))
3930 ;(native-inputs
3931 ; `(("julia-aqua" ,julia-aqua)
3932 ; ("julia-documenter" ,julia-documenter)))
3933 (home-page "https://github.com/JuliaArrays/StackViews.jl")
3934 (synopsis "No more catcat")
3935 (description "StackViews provides only one array type: @code{StackView}.
3936 There are multiple ways to understand @code{StackView}:
3937 @itemize
3938 @item inverse of @code{eachslice}
3939 @item @code{cat} variant
3940 @item view object
3941 @item lazy version of @code{repeat} special case
3942 @end itemize")
3943 (license license:expat)))
3944
3945 (define-public julia-static
3946 (package
3947 (name "julia-static")
3948 (version "0.3.0")
3949 (source
3950 (origin
3951 (method git-fetch)
3952 (uri (git-reference
3953 (url "https://github.com/SciML/Static.jl")
3954 (commit (string-append "v" version))))
3955 (file-name (git-file-name name version))
3956 (sha256
3957 (base32 "19k7h47zhz3zz28i0l4b3cc0r07pzp8kf35z0yammpy361b644l2"))))
3958 (build-system julia-build-system)
3959 (propagated-inputs
3960 `(("julia-ifelse" ,julia-ifelse)))
3961 (native-inputs
3962 `(("julia-aqua" ,julia-aqua)))
3963 (home-page "https://github.com/SciML/Static.jl")
3964 (synopsis "Static types useful for dispatch and generated functions")
3965 (description "Static.jl defines a limited set of statically parameterized
3966 types and a common interface that is shared between them.")
3967 (license license:expat)))
3968
3969 (define-public julia-staticarrays
3970 (package
3971 (name "julia-staticarrays")
3972 (version "1.2.13")
3973 (source
3974 (origin
3975 (method git-fetch)
3976 (uri (git-reference
3977 (url "https://github.com/JuliaArrays/StaticArrays.jl")
3978 (commit (string-append "v" version))))
3979 (file-name (git-file-name name version))
3980 (sha256
3981 (base32 "041mijzgzm8r61a3gwspr2wcxjikqksvj2rbnl4gmcy41alqmx79"))))
3982 (build-system julia-build-system)
3983 (inputs
3984 `(("julia-benchmarktools" ,julia-benchmarktools)))
3985 (home-page "https://github.com/JuliaArrays/StaticArrays.jl")
3986 (synopsis "Statically sized arrays")
3987 (description "This package provides a framework for implementing
3988 statically sized arrays in Julia, using the abstract type
3989 @code{StaticArray{Size,T,N} <: AbstractArray{T,N}}. Subtypes of
3990 @code{StaticArray} will provide fast implementations of common array and
3991 linear algebra operations.")
3992 (license license:expat)))
3993
3994 (define-public julia-statsapi
3995 (package
3996 (name "julia-statsapi")
3997 (version "1.0.0")
3998 (source
3999 (origin
4000 (method git-fetch)
4001 (uri (git-reference
4002 (url "https://github.com/JuliaStats/StatsAPI.jl")
4003 (commit (string-append "v" version))))
4004 (file-name (git-file-name name version))
4005 (sha256
4006 (base32 "1k1c3s7i5wzkz4r9fyy4gd7wb97p0qgbc7bmaajm16zqipfmy2bv"))))
4007 (build-system julia-build-system)
4008 (home-page "https://juliastats.org/")
4009 (synopsis "Statistics-focused namespace for packages to share functions")
4010 (description "This package provides a namespace for data-related generic
4011 function definitions to solve the optional dependency problem; packages wishing
4012 to share and/or extend functions can avoid depending directly on each other by
4013 moving the function definition to @code{StatsAPI.jl} and each package taking a
4014 dependency on it.")
4015 (license license:expat)))
4016
4017 (define-public julia-statsbase
4018 (package
4019 (name "julia-statsbase")
4020 (version "0.33.8")
4021 (source
4022 (origin
4023 (method git-fetch)
4024 (uri (git-reference
4025 (url "https://github.com/JuliaStats/StatsBase.jl")
4026 (commit (string-append "v" version))))
4027 (file-name (git-file-name name version))
4028 (sha256
4029 (base32 "02y4pm5yvg713a2pn970bbcfkrn2h133rxbxk1da18svhqw3czhi"))))
4030 (build-system julia-build-system)
4031 (propagated-inputs
4032 `(("julia-dataapi" ,julia-dataapi)
4033 ("julia-datastructures" ,julia-datastructures)
4034 ("julia-missings" ,julia-missings)
4035 ("julia-sortingalgorithms" ,julia-sortingalgorithms)
4036 ("julia-statsapi" ,julia-statsapi)))
4037 (native-inputs
4038 `(("julia-stablerngs" ,julia-stablerngs)))
4039 (home-page "https://github.com/JuliaStats/StatsBase.jl")
4040 (synopsis "Basic statistics for Julia")
4041 (description "StatsBase.jl is a Julia package that provides basic support
4042 for statistics. Particularly, it implements a variety of statistics-related
4043 functions, such as scalar statistics, high-order moment computation, counting,
4044 ranking, covariances, sampling, and empirical density estimation.")
4045 (license license:expat)))
4046
4047 (define-public julia-stringdistances
4048 (package
4049 (name "julia-stringdistances")
4050 (version "0.10.0")
4051 (source
4052 (origin
4053 (method git-fetch)
4054 (uri (git-reference
4055 (url "https://github.com/matthieugomez/StringDistances.jl")
4056 (commit (string-append "v" version))))
4057 (file-name (git-file-name name version))
4058 (sha256
4059 (base32 "0n5707wplbibzhhv1xmshvc025d7xk6mnikclc3hvq5cdc0gy9f7"))))
4060 (build-system julia-build-system)
4061 (propagated-inputs
4062 `(("julia-distances" ,julia-distances)))
4063 (home-page "https://github.com/matthieugomez/StringDistances.jl")
4064 (synopsis "String Distances in Julia")
4065 (description "This package provides string distances in Julia. Distances
4066 are defined for @code{AbstractStrings}, and any iterator that define
4067 @code{length()}. The package also defines Distance \"modifiers\" that can be
4068 applied to any distance.")
4069 (license license:expat)))
4070
4071 (define-public julia-structtypes
4072 (package
4073 (name "julia-structtypes")
4074 (version "1.7.2")
4075 (source
4076 (origin
4077 (method git-fetch)
4078 (uri (git-reference
4079 (url "https://github.com/JuliaData/StructTypes.jl")
4080 (commit (string-append "v" version))))
4081 (file-name (git-file-name name version))
4082 (sha256
4083 (base32 "02mn4kkhn3927dk7945c9bjwlldihydxgn5ilmqqvs8dknvbw8p1"))))
4084 (build-system julia-build-system)
4085 (home-page "https://juliadata.github.io/StructTypes.jl/stable/")
4086 (synopsis "Abstract definitions and convenience methods for Julia objects")
4087 (description "This package provides the @code{StructTypes.StructType} trait
4088 for Julia types to declare the kind of \"struct\" they are, providing
4089 serialization/deserialization packages patterns and strategies to automatically
4090 construct objects.")
4091 (license license:expat)))
4092
4093 (define-public julia-suppressor
4094 (package
4095 (name "julia-suppressor")
4096 (version "0.2.0")
4097 (source
4098 (origin
4099 (method git-fetch)
4100 (uri (git-reference
4101 (url "https://github.com/JuliaIO/Suppressor.jl")
4102 (commit (string-append "v" version))))
4103 (file-name (git-file-name name version))
4104 (sha256
4105 (base32 "0v6pxvf8lzrqjc676snvlszh14ridl442g2h6syfjiy75pk7mdyc"))))
4106 (build-system julia-build-system)
4107 (home-page "https://github.com/JuliaIO/Suppressor.jl")
4108 (synopsis "Capture stdout and sterr")
4109 (description "Julia macros for suppressing and/or capturing output (stdout),
4110 warnings (stderr) or both streams at the same time.")
4111 (license license:expat)))
4112
4113 (define-public julia-tableiointerface
4114 (package
4115 (name "julia-tableiointerface")
4116 (version "0.1.6")
4117 (source
4118 (origin
4119 (method git-fetch)
4120 (uri (git-reference
4121 (url "https://github.com/lungben/TableIOInterface.jl")
4122 (commit (string-append "v" version))))
4123 (file-name (git-file-name name version))
4124 (sha256
4125 (base32 "0p2fi9jbyfg2j6rysv4if7dx8qw2mssb04i75j1zq607j8707kvn"))))
4126 (build-system julia-build-system)
4127 (home-page "https://github.com/lungben/TableIOInterface.jl")
4128 (synopsis "File formats based on file extensions")
4129 (description "This package determines tabular file formats based on file
4130 extensions. It is intended to be the base both for @code{TableIO.jl} and for
4131 the @code{Pluto.jl} tabular data import functionality.")
4132 (license license:expat)))
4133
4134 (define-public julia-tables
4135 (package
4136 (name "julia-tables")
4137 (version "1.4.4")
4138 (source
4139 (origin
4140 (method git-fetch)
4141 (uri (git-reference
4142 (url "https://github.com/JuliaData/Tables.jl")
4143 (commit (string-append "v" version))))
4144 (file-name (git-file-name name version))
4145 (sha256
4146 (base32 "1sqqagzqvav8b1rv5ywwbgy9ixvlmipq95fkwfwn0m8769i8jwzb"))))
4147 (build-system julia-build-system)
4148 (propagated-inputs
4149 `(("julia-dataapi" ,julia-dataapi)
4150 ("julia-datavalueinterfaces" ,julia-datavalueinterfaces)
4151 ("julia-iteratorinterfaceextensions" ,julia-iteratorinterfaceextensions)
4152 ("julia-tabletraits" ,julia-tabletraits)))
4153 (native-inputs
4154 `(("julia-datavalues" ,julia-datavalues)
4155 ("julia-queryoperators" ,julia-queryoperators)))
4156 (home-page "https://github.com/JuliaData/Tables.jl")
4157 (synopsis "Interface for tables in Julia")
4158 (description "The @code{Tables.jl} package provides simple, yet powerful
4159 interface functions for working with all kinds tabular data.")
4160 (license license:expat)))
4161
4162 (define-public julia-tableshowutils
4163 ;; The 0.2.5 release is not fully compatable with newer versions of Julia.
4164 (let ((commit "c4e02d8b9bbb31fc81ed6618955e9b1c7cb04460")
4165 (revision "1"))
4166 (package
4167 (name "julia-tableshowutils")
4168 (version "0.2.5")
4169 (source
4170 (origin
4171 (method git-fetch)
4172 (uri (git-reference
4173 (url "https://github.com/queryverse/TableShowUtils.jl")
4174 (commit commit)))
4175 (file-name (git-file-name name version))
4176 (sha256
4177 (base32 "0gp3hpj3jvzfhkp9r345vfic2j2n2s60729wv38hwn75csp74cg5"))))
4178 (build-system julia-build-system)
4179 (propagated-inputs
4180 `(("julia-datavalues" ,julia-datavalues)
4181 ("julia-json" ,julia-json)))
4182 (home-page "https://github.com/queryverse/TableShowUtils.jl")
4183 (synopsis "Implement show for TableTraits.jl types")
4184 (description "This package provides some common helper functions that make
4185 it easier to implement various @code{Base.show} functions for types that
4186 participate in the @code{TableTraits.jl} ecosystem.")
4187 (license license:expat))))
4188
4189 (define-public julia-tabletraits
4190 (package
4191 (name "julia-tabletraits")
4192 (version "1.0.1")
4193 (source
4194 (origin
4195 (method git-fetch)
4196 (uri (git-reference
4197 (url "https://github.com/queryverse/TableTraits.jl")
4198 (commit (string-append "v" version))))
4199 (file-name (git-file-name name version))
4200 (sha256
4201 (base32 "08ssb2630wm6j8f2qa985mn2vfibfm5kjcn4ayl2qkhfcyp8daw4"))))
4202 (build-system julia-build-system)
4203 (propagated-inputs
4204 `(("julia-iteratorinterfaceextensions" ,julia-iteratorinterfaceextensions)))
4205 (home-page "https://github.com/queryverse/TableTraits.jl")
4206 (synopsis "Traits for Julia tables")
4207 (description "TableTraits defines a generic interface for tabular data.")
4208 (license license:expat)))
4209
4210 (define-public julia-tensorcore
4211 (package
4212 (name "julia-tensorcore")
4213 (version "0.1.1")
4214 (source
4215 (origin
4216 (method git-fetch)
4217 (uri (git-reference
4218 (url "https://github.com/JuliaMath/TensorCore.jl")
4219 (commit (string-append "v" version))))
4220 (file-name (git-file-name name version))
4221 (sha256
4222 (base32 "1sy3in4a1rl3l2vk0cm9mzg2nkva7syhr7i35si0kbzhkdwpbqjy"))))
4223 (build-system julia-build-system)
4224 (home-page "https://github.com/JuliaMath/TensorCore.jl")
4225 (synopsis "Tensor-algebra definitions")
4226 (description "This package is intended as a lightweight foundation for
4227 tensor operations across the Julia ecosystem. Currently it exports three
4228 operations: @acronym{hadamard, elementwise multiplication}, @acronym{tensor,
4229 product preserves all dimensions}, and @acronym{boxdot, contracts neighboring
4230 dimensions}.")
4231 (license license:expat)))
4232
4233 (define-public julia-testimages
4234 (package
4235 (name "julia-testimages")
4236 (version "1.5.0")
4237 (source
4238 (origin
4239 (method git-fetch)
4240 (uri (git-reference
4241 (url "https://github.com/JuliaImages/TestImages.jl")
4242 (commit (string-append "v" version))))
4243 (file-name (git-file-name name version))
4244 (sha256
4245 (base32 "1lnfsmx33qspyvxw0cykwh7il8xykjpcw1080sisn95ngz2qhdmy"))))
4246 (build-system julia-build-system)
4247 (arguments
4248 `(#:tests? #f)) ; cycle with ImageMagick.jl
4249 (propagated-inputs
4250 `(("julia-axisarrays" ,julia-axisarrays)
4251 ("julia-colortypes" ,julia-colortypes)
4252 ("julia-fileio" ,julia-fileio)
4253 ("julia-offsetarrays" ,julia-offsetarrays)
4254 ("julia-stringdistances" ,julia-stringdistances)))
4255 ;(native-inputs
4256 ; `(("julia-colors" ,julia-colors)
4257 ; ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
4258 ; ("julia-imagecontrastadjustment" ,julia-imagecontrastadjustment)
4259 ; ("julia-imagemagick" ,julia-imagemagick)
4260 ; ("julia-ometiff" ,julia-ometiff)
4261 ; ("julia-referencetests" ,julia-referencetests)))
4262 (home-page "https://testimages.juliaimages.org/")
4263 (synopsis "Standard test images for Julia")
4264 (description "This package provides a convenient Julia interface for loading
4265 standard named test images and example images for the internal usage in
4266 @code{JuliaImages}. This can be used in conjunction with the @code{Images}
4267 package.")
4268 (license license:expat)))
4269
4270 (define-public julia-tracker
4271 (package
4272 (name "julia-tracker")
4273 (version "0.2.12")
4274 (source
4275 (origin
4276 (method git-fetch)
4277 (uri (git-reference
4278 (url "https://github.com/FluxML/Tracker.jl")
4279 (commit (string-append "v" version))))
4280 (file-name (git-file-name name version))
4281 (sha256
4282 (base32 "1s4mdywbp7nli7z985fqaj1rs4i6d92b1jx3lhg0qhk1s5wc0v8j"))
4283 (patches (search-patches "julia-tracker-16-compat.patch"))))
4284 (build-system julia-build-system)
4285 (propagated-inputs
4286 `(("julia-adapt" ,julia-adapt)
4287 ("julia-diffrules" ,julia-diffrules)
4288 ("julia-forwarddiff" ,julia-forwarddiff)
4289 ("julia-macrotools" ,julia-macrotools)
4290 ("julia-nanmath" ,julia-nanmath)
4291 ("julia-nnlib" ,julia-nnlib)
4292 ("julia-requires" ,julia-requires)
4293 ("julia-specialfunctions" ,julia-specialfunctions)))
4294 (native-inputs
4295 `(("julia-pdmats" ,julia-pdmats)))
4296 (home-page "https://github.com/FluxML/Tracker.jl")
4297 (synopsis "Operator overloading reverse-mode automatic differentiator")
4298 (description "@code{Tracker.jl} previously provided @code{Flux.jl} with
4299 automatic differentiation for its machine learning platform.")
4300 (license license:expat)))
4301
4302 (define-public julia-typedtables
4303 (package
4304 (name "julia-typedtables")
4305 (version "1.4.0")
4306 (source
4307 (origin
4308 (method git-fetch)
4309 (uri (git-reference
4310 (url "https://github.com/JuliaData/TypedTables.jl")
4311 (commit (string-append "v" version))))
4312 (file-name (git-file-name name version))
4313 (sha256
4314 (base32 "0nk6zhqvl2r8yhjdhb59kxq0srd3vy4ysg4d8rszj9a43dnn3w3i"))))
4315 (build-system julia-build-system)
4316 (propagated-inputs
4317 `(("julia-adapt" ,julia-adapt)
4318 ("julia-splitapplycombine" ,julia-splitapplycombine)
4319 ("julia-tables" ,julia-tables)))
4320 (home-page "https://github.com/JuliaData/TypedTables.jl")
4321 (synopsis "Column-based storage for data analysis in Julia")
4322 (description "@code{TypedTables.jl} provides two column-based storage
4323 containers: @code{Table} and @code{FlexTable}, both of which represent an array
4324 of @code{NamedTuples}. This package is designed to be lightweight, easy-to-use
4325 and fast, and presents a very minimal new interface to learn.")
4326 (license license:expat)))
4327
4328 (define-public julia-unpack
4329 (package
4330 (name "julia-unpack")
4331 (version "1.0.2")
4332 (source
4333 (origin
4334 (method git-fetch)
4335 (uri (git-reference
4336 (url "https://github.com/mauro3/UnPack.jl")
4337 (commit (string-append "v" version))))
4338 (file-name (git-file-name name version))
4339 (sha256
4340 (base32 "066v1px72zidnvhl0rczhh07rcfwvli0jx5nprrgyi1dvj3mps2a"))))
4341 (build-system julia-build-system)
4342 (home-page "https://github.com/mauro3/UnPack.jl")
4343 (synopsis "Pack and Unpack macros for Julia")
4344 (description "The @code{@@unpack} and @code{@@pack!} macros work to unpack
4345 types, modules, and dictionaries.")
4346 (license license:expat)))
4347
4348 (define-public julia-uris
4349 (package
4350 (name "julia-uris")
4351 (version "1.3.0")
4352 (source
4353 (origin
4354 (method git-fetch)
4355 (uri (git-reference
4356 (url "https://github.com/JuliaWeb/URIs.jl")
4357 (commit (string-append "v" version))))
4358 (file-name (git-file-name name version))
4359 (sha256
4360 (base32 "0kp4hg3kknkm2smlcizqfd33l9x4vkahc2714gnbjp39fj285b92"))))
4361 (build-system julia-build-system)
4362 (arguments
4363 '(#:julia-package-name "URIs" ;required to run tests
4364 #:phases
4365 (modify-phases %standard-phases
4366 (add-before 'check 'change-dir
4367 ;; Tests must be run from the testdir
4368 (lambda* (#:key source outputs #:allow-other-keys)
4369 (let ((out (assoc-ref outputs "out")))
4370 (chdir
4371 (string-append out "/share/julia/packages/URIs/test")))
4372 #t)))))
4373 ;; required for tests
4374 (inputs `(("julia-json" ,julia-json)))
4375 (home-page "https://github.com/JuliaWeb/URIs.jl")
4376 (synopsis "URI parsing in Julia")
4377 (description "@code{URIs.jl} is a Julia package that allows parsing and
4378 working with @acronym{URIs,Uniform Resource Identifiers}, as defined in RFC
4379 3986.")
4380 (license license:expat)))
4381
4382 (define-public julia-unitful
4383 (package
4384 (name "julia-unitful")
4385 (version "1.9.0")
4386 (source
4387 (origin
4388 (method git-fetch)
4389 (uri (git-reference
4390 (url "https://github.com/PainterQubits/Unitful.jl")
4391 (commit (string-append "v" version))))
4392 (file-name (git-file-name name version))
4393 (sha256
4394 (base32 "10qwscd15dnmvx116dwvg99m7kmwgmj5ahdkq7psiq48lcc554gq"))))
4395 (build-system julia-build-system)
4396 (propagated-inputs
4397 `(("julia-constructionbase" ,julia-constructionbase)))
4398 (home-page "https://painterqubits.github.io/Unitful.jl/stable/")
4399 (synopsis "Physical units in Julia")
4400 (description "This package supports SI units and also many other unit
4401 system.")
4402 (license license:expat)))
4403
4404 (define-public julia-versionparsing
4405 (package
4406 (name "julia-versionparsing")
4407 (version "1.2.0")
4408 (source
4409 (origin
4410 (method git-fetch)
4411 (uri (git-reference
4412 (url "https://github.com/JuliaInterop/VersionParsing.jl")
4413 (commit (string-append "v" version))))
4414 (file-name (git-file-name name version))
4415 (sha256
4416 (base32 "060s72dsnpavgilf7f7315lw2sn4npk8lkndmj6bg7i23hppiwva"))))
4417 (build-system julia-build-system)
4418 (home-page "https://github.com/JuliaInterop/VersionParsing.jl")
4419 (synopsis "Flexible VersionNumber parsing in Julia")
4420 (description "The @code{VersionParsing} package implements flexible parsing
4421 of version-number strings into Julia's built-in @code{VersionNumber} type, via
4422 the @code{vparse(string)} function. Unlike the @code{VersionNumber(string)}
4423 constructor, @code{vparse(string)} can handle version-number strings in a much
4424 wider range of formats than are encompassed by the semver standard. This is
4425 useful in order to support @code{VersionNumber} comparisons applied to
4426 \"foreign\" version numbers from external packages.")
4427 (license license:expat)))
4428
4429 (define-public julia-weakrefstrings
4430 (package
4431 (name "julia-weakrefstrings")
4432 (version "1.1.0")
4433 (source
4434 (origin
4435 (method git-fetch)
4436 (uri (git-reference
4437 (url "https://github.com/JuliaData/WeakRefStrings.jl")
4438 (commit (string-append "v" version))))
4439 (file-name (git-file-name name version))
4440 (sha256
4441 (base32 "14h1vdnc3rx87w6v2rr59lgb4kai2hd1wzqpxhmzsi8karg2z219"))))
4442 (build-system julia-build-system)
4443 (propagated-inputs
4444 `(("julia-dataapi" ,julia-dataapi)
4445 ("julia-parsers" ,julia-parsers)))
4446 (home-page "https://github.com/JuliaData/WeakRefStrings.jl")
4447 (synopsis "Efficient string representation and transfer in Julia")
4448 (description "This package provides a minimal String type for Julia that
4449 allows for efficient string representation and transfer")
4450 (license license:expat)))
4451
4452 (define-public julia-woodburymatrices
4453 (package
4454 (name "julia-woodburymatrices")
4455 (version "0.5.3")
4456 (source
4457 (origin
4458 (method git-fetch)
4459 (uri (git-reference
4460 (url "https://github.com/timholy/WoodburyMatrices.jl")
4461 (commit (string-append "v" version))))
4462 (file-name (git-file-name name version))
4463 (sha256
4464 (base32 "04yykivi8zrbryxlmb0p5xa6lma8iq22r5s863117dnnqj5gaffd"))))
4465 (build-system julia-build-system)
4466 (home-page "https://github.com/timholy/WoodburyMatrices.jl")
4467 (synopsis "Support for the Woodbury matrix identity for Julia")
4468 (description "This package provides support for the Woodbury matrix identity
4469 for the Julia programming language. This is a generalization of the
4470 Sherman-Morrison formula. Note that the Woodbury matrix identity is notorious
4471 for floating-point roundoff errors, so be prepared for a certain amount of
4472 inaccuracy in the result.")
4473 (license license:expat)))
4474
4475 (define-public julia-zipfile
4476 (package
4477 (name "julia-zipfile")
4478 (version "0.9.3")
4479 (source
4480 (origin
4481 (method git-fetch)
4482 (uri (git-reference
4483 (url "https://github.com/fhs/ZipFile.jl")
4484 (commit (string-append "v" version))))
4485 (file-name (git-file-name name version))
4486 (sha256
4487 (base32
4488 "15bm3ki5mb9nvqs2byznrryq0bilnjcvsfy3k05hxhk9vapilw7k"))))
4489 (build-system julia-build-system)
4490 (propagated-inputs
4491 `(("julia-zlib-jll" ,julia-zlib-jll)))
4492 (home-page "https://github.com/fhs/ZipFile.jl")
4493 (synopsis "Read/Write ZIP archives in Julia")
4494 (description "This module provides support for reading and writing ZIP
4495 archives in Julia.")
4496 (license license:expat)))
4497
4498 (define-public julia-zygoterules
4499 (package
4500 (name "julia-zygoterules")
4501 (version "0.2.1")
4502 (source
4503 (origin
4504 (method git-fetch)
4505 (uri (git-reference
4506 (url "https://github.com/FluxML/ZygoteRules.jl")
4507 (commit (string-append "v" version))))
4508 (file-name (git-file-name name version))
4509 (sha256
4510 (base32 "07i2mf6rr5b8i6l82qgwl5arsb5pwyyzyfasgnszhdqllk9501bs"))))
4511 (build-system julia-build-system)
4512 (propagated-inputs
4513 `(("julia-macrotools" ,julia-macrotools)))
4514 (home-page "https://github.com/FluxML/ZygoteRules.jl")
4515 (synopsis "Add minimal custom gradients to Zygote")
4516 (description "Minimal package which enables to add custom gradients to
4517 Zygote, without depending on Zygote itself.")
4518 (license license:expat)))
4519
4520 (define-public julia-zygote
4521 (package
4522 (name "julia-zygote")
4523 (version "0.6.17")
4524 (source
4525 (origin
4526 (method git-fetch)
4527 (uri (git-reference
4528 (url "https://github.com/FluxML/Zygote.jl")
4529 (commit (string-append "v" version))))
4530 (file-name (git-file-name name version))
4531 (sha256
4532 (base32 "1cx66sp30s34ln6p0fpqk1ggjxfxg2gp8791zz3cl85dmk4dl14b"))))
4533 (build-system julia-build-system)
4534 (arguments
4535 `(#:tests? #f)) ;require CUDA, not packaged yet
4536 (propagated-inputs
4537 `(("julia-abstractffs" ,julia-abstractffts)
4538 ("julia-chainrules" ,julia-chainrules)
4539 ("julia-diffrules" ,julia-diffrules)
4540 ("julia-fillarrays" ,julia-fillarrays)
4541 ("julia-forwarddiff" ,julia-forwarddiff)
4542 ("julia-irtools" ,julia-irtools)
4543 ("julia-macrotools" ,julia-macrotools)
4544 ("julia-nanmath" ,julia-nanmath)
4545 ("julia-requires" ,julia-requires)
4546 ("julia-specialfunctions" ,julia-specialfunctions)
4547 ("julia-zygote-rules" ,julia-zygoterules)))
4548 (home-page "https://fluxml.ai/Zygote.jl")
4549 (synopsis "Automatic differentiation in Julia")
4550 (description "Zygote provides source-to-source automatic
4551 differentiation (AD) in Julia, and is the next-generation AD system for the
4552 Flux differentiable programming framework.")
4553 (license license:expat)))