1 ;;; GNU Guix --- Functional package management for GNU
2 ;;; Copyright © 2020, 2021 Nicolò Balzarotti <nicolo@nixo.xyz>
3 ;;; Copyright © 2021 Simon Tournier <zimon.toutoune@gmail.com>
4 ;;; Copyright © 2021 Efraim Flashner <efraim@flashner.co.il>
5 ;;; Copyright © 2021 Vinicius Monego <monego@posteo.net>
7 ;;; This file is part of GNU Guix.
9 ;;; GNU Guix is free software; you can redistribute it and/or modify it
10 ;;; under the terms of the GNU General Public License as published by
11 ;;; the Free Software Foundation; either version 3 of the License, or (at
12 ;;; your option) any later version.
14 ;;; GNU Guix is distributed in the hope that it will be useful, but
15 ;;; WITHOUT ANY WARRANTY; without even the implied warranty of
16 ;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
17 ;;; GNU General Public License for more details.
19 ;;; You should have received a copy of the GNU General Public License
20 ;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
22 (define-module (gnu packages julia-xyz)
23 #:use-module ((guix licenses) #:prefix license:)
24 #:use-module (gnu packages)
25 #:use-module (guix utils)
26 #:use-module (guix packages)
27 #:use-module (guix git-download)
28 #:use-module (guix build-system julia)
29 #:use-module (gnu packages gcc)
30 #:use-module (gnu packages julia-jll)
31 #:use-module (gnu packages python)
32 #:use-module (gnu packages python-xyz)
33 #:use-module (gnu packages version-control))
35 (define-public julia-abstractffts
37 (name "julia-abstractffts")
43 (url "https://github.com/JuliaMath/AbstractFFTS.jl")
44 (commit (string-append "v" version))))
45 (file-name (git-file-name name version))
47 (base32 "0083pwdyxjb04i330ir9pc8kmp4bwk59lx1jgc9qi05y8j7xzbp0"))))
48 (build-system julia-build-system)
49 (inputs ;required for tests
50 `(("julia-unitful" ,julia-unitful)))
51 (home-page "https://github.com/JuliaGPU/Adapt.jl")
52 (synopsis "General framework for fast Fourier transforms (FFTs)")
53 (description "This package allows multiple FFT packages to co-exist with
54 the same underlying @code{fft(x)} and @code{plan_fft(x)} interface. It is
55 mainly not intended to be used directly. Instead, developers of packages that
56 implement FFTs (such as @code{FFTW.jl} or @code{FastTransforms.jl}) extend the
57 types/functions defined in AbstractFFTs.")
58 (license license:expat)))
60 (define-public julia-abstracttrees
62 (name "julia-abstracttrees")
68 (url "https://github.com/JuliaCollections/AbstractTrees.jl")
69 (commit (string-append "v" version))))
70 (file-name (git-file-name name version))
72 (base32 "16is5n2qa69cci34vfazxsa7ik6q0hbnnqrbrhkq8frh142f1xs8"))))
73 (build-system julia-build-system)
74 (home-page "https://juliacollections.github.io/AbstractTrees.jl/stable/")
75 (synopsis "Abstract Julia interfaces for working with trees")
76 (description "This Julia package provides several utilities for working
77 with tree-like data structures. Most importantly, it defines the
78 @code{children} method that any package that contains such a data structure
79 may import and extend in order to take advantage of any generic tree algorithm
81 (license license:expat)))
83 (define-public julia-adapt
91 (url "https://github.com/JuliaGPU/Adapt.jl")
92 (commit (string-append "v" version))))
93 (file-name (git-file-name name version))
95 (base32 "009fj59fzhvfsyw35kakllsh36k3xlwyzq8qa5f5k598i3pq14i7"))))
96 (build-system julia-build-system)
97 (home-page "https://github.com/JuliaGPU/Adapt.jl")
98 (synopsis "Package providing the @code{adapt} function, similar to @code{convert}")
99 (description "This Julia package provides the @code{adapt(T, x)} function
100 acts like @code{convert(T, x)}, but without the restriction of returning a
101 @code{T}. This allows you to \"convert\" wrapper types like @code{Adjoint} to
102 be GPU compatible without throwing away the wrapper.")
103 (license license:expat)))
105 (define-public julia-ansicoloredprinters
107 (name "julia-ansicoloredprinters")
113 (url "https://github.com/JuliaDocs/ANSIColoredPrinters.jl")
114 (commit (string-append "v" version))))
115 (file-name (git-file-name name version))
117 (base32 "0dp5agljr0g50s5gn0pr70wrz01ggck6pb40ay3l4szhswq7mqzf"))))
118 (build-system julia-build-system)
119 (home-page "https://github.com/JuliaDocs/ANSIColoredPrinters.jl")
120 (synopsis "ANSI escape code translator")
121 (description "@code{ANSIColoredPrinters.jl} converts a text qualified by
122 ANSI escape codes to another format.")
123 (license license:expat)))
125 (define-public julia-aqua
133 (url "https://github.com/JuliaTesting/Aqua.jl")
134 (commit (string-append "v" version))))
135 (file-name (git-file-name name version))
137 (base32 "1g0kyzcdykgs247j72jpc2qqall696jwgb3hnn4cxmbi8bkf7wpk"))))
138 (build-system julia-build-system)
139 (home-page "https://github.com/JuliaTesting/Aqua.jl")
140 (synopsis "Automated quality assurance for Julia packages")
141 (description "@acronym{Aqua.jl, Auto QUality Assurance for Julia packages},
142 provides functions to run a few automatable checks for Julia packages.")
143 (license license:expat)))
145 (define-public julia-arrayinterface
147 (name "julia-arrayinterface")
153 (url "https://github.com/JuliaArrays/ArrayInterface.jl")
154 (commit (string-append "v" version))))
155 (file-name (git-file-name name version))
157 (base32 "0cmldnzvdgmfnrnrzgj6v1mfr2rvk5096392rwmhd3iyx7v0pq33"))))
158 (build-system julia-build-system)
160 `(("julia-ifelse" ,julia-ifelse)
161 ("julia-requires" ,julia-requires)
162 ("julia-static" ,julia-static)))
164 `(("julia-aqua" ,julia-aqua)
165 ("julia-bandedmatrices" ,julia-bandedmatrices)
166 ("julia-blockbandedmatrices" ,julia-blockbandedmatrices)
167 ("julia-ifelse" ,julia-ifelse)
168 ("julia-offsetarrays" ,julia-offsetarrays)
169 ("julia-staticarrays" ,julia-staticarrays)))
170 (home-page "https://github.com/JuliaArrays/ArrayInterface.jl")
171 (synopsis "Base array interface primitives")
172 (description "The purpose of this library is to solidify extensions to the
173 current @code{AbstractArray} interface, which are put to use in package
174 ecosystems like @code{DifferentialEquations.jl}. Since these libraries are
175 live, this package will serve as a staging ground for ideas before they are
176 merged into Base Julia. For this reason, no functionality is exported so that
177 if such functions are added and exported in a future Base Julia, there will be
178 no issues with the upgrade.")
179 (license license:expat)))
181 (define-public julia-arraylayouts
183 (name "julia-arraylayouts")
189 (url "https://github.com/JuliaMatrices/ArrayLayouts.jl")
190 (commit (string-append "v" version))))
191 (file-name (git-file-name name version))
193 (base32 "05q62pks8j23pgbrfny072rrwzrz6q19l68srnjxxv39ncmdmrvg"))))
194 (build-system julia-build-system)
196 `(("julia-fillarrays" ,julia-fillarrays)))
197 (home-page "https://github.com/JuliaMatrices/ArrayLayouts.jl")
198 (synopsis "Array layouts and general fast linear algebra")
199 (description "This package implements a trait-based framework for describing
200 array layouts such as column major, row major, etc. that can be dispatched to
201 appropriate BLAS or optimised Julia linear algebra routines. This supports a
202 much wider class of matrix types than Julia's in-built @code{StridedArray}.")
203 (license license:expat)))
205 (define-public julia-axisalgorithms
207 (name "julia-axisalgorithms")
213 (url "https://github.com/timholy/AxisAlgorithms.jl")
214 (commit (string-append "v" version))))
215 (file-name (git-file-name name version))
217 (base32 "00x85lnfln7xkfnirpplzyi8r6q92nfqwya8il156bf7b1pa20gk"))))
218 (build-system julia-build-system)
220 `(("julia-woodburymatrices" ,julia-woodburymatrices)))
221 (home-page "https://github.com/timholy/AxisAlgorithms.jl")
222 (synopsis "Filtering and linear algebra routines for multidimensional arrays")
223 (description "@code{AxisAlgorithms} is a collection of filtering and linear
224 algebra algorithms for multidimensional arrays. For algorithms that would
225 typically apply along the columns of a matrix, you can instead pick an arbitrary
227 (license license:expat)))
229 (define-public julia-axisarrays
231 (name "julia-axisarrays")
237 (url "https://github.com/JuliaArrays/AxisArrays.jl")
238 (commit (string-append "v" version))))
239 (file-name (git-file-name name version))
241 (base32 "03kzan1lm4fxfhzv1xjg3ysf6y7nagcc61vfz15kvdrp1dqxlynk"))))
242 (build-system julia-build-system)
244 `(("julia-rangearrays" ,julia-rangearrays)
245 ("julia-intervalsets" ,julia-intervalsets)
246 ("julia-itertools" ,julia-itertools)))
248 `(("julia-offsetarrays" ,julia-offsetarrays)
249 ("julia-unitful" ,julia-unitful)))
250 (home-page "http://juliaarrays.github.io/AxisArrays.jl/latest/")
251 (synopsis "Arrays where each dimension can have a named axis with values")
252 (description "This package for the Julia language provides an array type
253 (the AxisArray) that knows about its dimension names and axis values. This
254 allows for indexing by name without incurring any runtime overhead. This
255 permits one to implement algorithms that are oblivious to the storage order of
256 the underlying arrays. AxisArrays can also be indexed by the values along their
257 axes, allowing column names or interval selections.")
258 (license license:expat)))
260 (define-public julia-bandedmatrices
262 (name "julia-bandedmatrices")
268 (url "https://github.com/JuliaMatrices/BandedMatrices.jl")
269 (commit (string-append "v" version))))
270 (file-name (git-file-name name version))
272 (base32 "0rlfj9gr9ss621v5kw5b06206yaak21s2vq9vk7r8a7p2ylncism"))))
273 (build-system julia-build-system)
275 `(("julia-arraylayouts" ,julia-arraylayouts)
276 ("julia-fillarrays" ,julia-fillarrays)))
278 `(("julia-genericlinearalgebra" ,julia-genericlinearalgebra)))
279 (home-page "https://github.com/JuliaMatrices/BandedMatrices.jl")
280 (synopsis "Julia package for representing banded matrices")
281 (description "This package supports representing banded matrices by only
282 the entries on the bands.")
283 (license license:expat)))
285 (define-public julia-benchmarktools
287 (name "julia-benchmarktools")
293 (url "https://github.com/JuliaCI/BenchmarkTools.jl")
294 (commit (string-append "v" version))))
295 (file-name (git-file-name name version))
297 (base32 "1xz3kdrphp4b158pg7dwkiry49phs2fjjpdvk1hjpww5ykxacks8"))))
298 (build-system julia-build-system)
299 (propagated-inputs `(("julia-json" ,julia-json)))
300 (home-page "https://github.com/JuliaCI/BenchmarkTools.jl")
301 (synopsis "Benchmarking framework for the Julia language")
302 (description "@code{BenchmarkTools.jl} makes performance tracking of Julia
303 code easy by supplying a framework for writing and running groups of
304 benchmarks as well as comparing benchmark results.")
305 (license license:expat)))
307 (define-public julia-blockarrays
309 (name "julia-blockarrays")
315 (url "https://github.com/JuliaArrays/BlockArrays.jl")
316 (commit (string-append "v" version))))
317 (file-name (git-file-name name version))
319 (base32 "1by26036fk9mawmcgqxpwizgbs398v9p6vrbsgg7h6llqn3q9iw1"))))
320 (build-system julia-build-system)
322 `(("julia-arraylayouts" ,julia-arraylayouts)
323 ("julia-fillarrays" ,julia-fillarrays)))
325 `(("julia-lazyarrays" ,julia-lazyarrays)
326 ("julia-offsetarrays" ,julia-offsetarrays)
327 ("julia-staticarrays" ,julia-staticarrays)))
328 (home-page "https://github.com/JuliaArrays/BlockArrays.jl")
329 (synopsis "BlockArrays for Julia")
330 (description "A block array is a partition of an array into blocks or
331 subarrays. This package has two purposes. Firstly, it defines an interface for
332 an @code{AbstractBlockArray} block arrays that can be shared among types
333 representing different types of block arrays. The advantage to this is that it
334 provides a consistent API for block arrays.
335 Secondly, it also implements two different type of block arrays that follow the
336 @code{AbstractBlockArray} interface. The type @code{BlockArray} stores each
337 block contiguously while the type @code{PseudoBlockArray} stores the full matrix
338 contiguously. This means that @code{BlockArray} supports fast non copying
339 extraction and insertion of blocks while @code{PseudoBlockArray} supports fast
340 access to the full matrix to use in in for example a linear solver.")
341 (license license:expat)))
343 (define-public julia-blockbandedmatrices
345 (name "julia-blockbandedmatrices")
351 (url "https://github.com/JuliaMatrices/BlockBandedMatrices.jl")
352 (commit (string-append "v" version))))
353 (file-name (git-file-name name version))
355 (base32 "10n1r6kmmv2wa307jfg9y2m6p16j8hngjp3fjavpbdy1r5haasm9"))))
356 (build-system julia-build-system)
358 `(("julia-arraylayouts" ,julia-arraylayouts)
359 ("julia-bandedmatrices" ,julia-bandedmatrices)
360 ("julia-blockarrays" ,julia-blockarrays)
361 ("julia-fillarrays" ,julia-fillarrays)
362 ("julia-matrixfactorizations" ,julia-matrixfactorizations)))
363 (home-page "https://github.com/JuliaMatrices/BlockBandedMatrices.jl")
364 (synopsis "Block-banded matrices and banded-block-banded matrices")
365 (description "This package supports representing block-banded and
366 banded-block-banded matrices by only storing the entries in the non-zero bands.
367 A @code{BlockBandedMatrix} is a subtype of @code{BlockMatrix} of
368 @code{BlockArrays.jl} whose layout of non-zero blocks is banded.")
369 (license license:expat)))
371 (define-public julia-bson
379 (url "https://github.com/JuliaIO/BSON.jl")
380 (commit (string-append "v" version))))
381 (file-name (git-file-name name version))
383 (base32 "1l5608ma2ys7v2gpcqbiv9mwfc6yrlqkihrfx1pf7fgv5llhd4fn"))))
384 (build-system julia-build-system)
386 `(("julia-dataframes" ,julia-dataframes)))
387 (home-page "https://github.com/JuliaIO/BSON.jl")
388 (synopsis "Binary JSON serialisation format")
389 (description "@code{BSON.jl} is a Julia package for working with the Binary
390 JSON serialisation format. It can be used as a general store for Julia data
392 (license license:expat)))
394 (define-public julia-bufferedstreams
396 (name "julia-bufferedstreams")
402 (url "https://github.com/BioJulia/BufferedStreams.jl")
403 (commit (string-append "v" version))))
404 (file-name (git-file-name name version))
406 (base32 "0sf4sxbq55mg2pwxyxf0c839z1lk0yxg8nmb7617bfbvw31cp88z"))))
407 (build-system julia-build-system)
408 ;; The package is old and tests are using undefined functions. They also
410 ;; https://travis-ci.org/BioJulia/BufferedStreams.jl/jobs/491050182
413 #:julia-package-name "BufferedStreams"))
414 (propagated-inputs `(("julia-compat" ,julia-compat)))
415 (home-page "https://github.com/BioJulia/BufferedStreams.jl")
416 (synopsis "Fast composable IO streams")
417 (description "@code{BufferedStreams.jl} provides buffering for IO
418 operations. It can wrap any @code{IO} type automatically making incremental
419 reading and writing faster.")
420 (license license:expat)))
422 (define-public julia-calculus
424 (name "julia-calculus")
430 (url "https://github.com/JuliaMath/Calculus.jl")
431 (commit (string-append "v" version))))
432 (file-name (git-file-name name version))
434 (base32 "0xh0ak2ycsjw2h86ja24ch3kn2d18zx3frrds78aimwdnqb1gdc2"))))
435 (build-system julia-build-system)
436 (home-page "https://github.com/JuliaMath/Calculus.jl")
437 (synopsis "Common utilities for automatic differentiation")
438 (description "This package provides tools for working with the basic
439 calculus operations of differentiation and integration. The @code{Calculus}
440 package produces approximate derivatives by several forms of finite
441 differencing or produces exact derivative using symbolic differentiation. It
442 can also be used to compute definite integrals by different numerical
444 (license license:expat)))
446 (define-public julia-categoricalarrays
448 (name "julia-categoricalarrays")
454 (url "https://github.com/JuliaData/CategoricalArrays.jl")
455 (commit (string-append "v" version))))
456 (file-name (git-file-name name version))
458 (base32 "1bcfylxdaizgasnmlkjjkf4dgfvy2y9ycnphw2d0z6mm9vx3n04x"))))
459 (build-system julia-build-system)
461 `(("julia-pooledarrays" ,julia-pooledarrays)))
463 `(("julia-dataapi" ,julia-dataapi)
464 ("julia-json" ,julia-json)
465 ("julia-json3" ,julia-json3)
466 ("julia-missings" ,julia-missings)
467 ("julia-recipesbase" ,julia-recipesbase)
468 ("julia-structtypes" ,julia-structtypes)))
469 (home-page "https://github.com/JuliaData/CategoricalArrays.jl")
470 (synopsis "Arrays for working with categorical data")
471 (description "This package provides tools for working with categorical
472 variables, both with unordered (nominal variables) and ordered categories
473 (ordinal variables), optionally with missing values.")
474 (license license:expat)))
476 (define-public julia-chainrules
478 (name "julia-chainrules")
484 (url "https://github.com/JuliaDiff/ChainRules.jl")
485 (commit (string-append "v" version))))
486 (file-name (git-file-name name version))
488 (base32 "0if93pd3b3scg2x3gmk1cbwjk0ax1n792vy8c38y3xl7jpd5cb70"))))
489 (build-system julia-build-system)
490 (inputs ;required for test
491 `(("julia-chainrulestestutils" ,julia-chainrulestestutils)
492 ("julia-finitedifferences" ,julia-finitedifferences)
493 ("julia-nanmath" ,julia-nanmath)
494 ("julia-specialfunctions" ,julia-specialfunctions)))
496 `(("julia-chainrulescore" ,julia-chainrulescore)
497 ("julia-compat" ,julia-compat)
498 ("julia-reexport" ,julia-reexport)
499 ("julia-requires" ,julia-requires)))
500 (home-page "https://github.com/JuliaDiff/ChainRules.jl")
501 (synopsis "Common utilities for automatic differentiation")
502 (description "The is package provides a variety of common utilities that
503 can be used by downstream automatic differentiation (AD) tools to define and
504 execute forward-, reverse-, and mixed-mode primitives.")
505 (license license:expat)))
507 (define-public julia-chainrulescore
509 (name "julia-chainrulescore")
515 (url "https://github.com/JuliaDiff/ChainRulesCore.jl")
516 (commit (string-append "v" version))))
517 (file-name (git-file-name name version))
519 (base32 "1866xv30h1bi7f2m993nljzf58wwmv8zlgn6ffn9j3wckch1nfpb"))))
520 (build-system julia-build-system)
521 (inputs ;required for tests
522 `(("julia-benchmarktools" ,julia-benchmarktools)
523 ("julia-staticarrays" ,julia-staticarrays)))
525 `(("julia-compat" ,julia-compat)))
526 (home-page "https://github.com/JuliaDiff/ChainRulesCore.jl")
527 (synopsis "Common utilities used by downstream automatic differentiation tools")
528 (description "The package provides a light-weight dependency for defining
529 sensitivities for functions without the need to depend on ChainRules itself.")
530 (license license:expat)))
532 (define-public julia-chainrulestestutils
534 (name "julia-chainrulestestutils")
540 (url "https://github.com/JuliaDiff/ChainRulesTestUtils.jl")
541 (commit (string-append "v" version))))
542 (file-name (git-file-name name version))
544 (base32 "1vlkyp72d514gyb4k3yhjl1g7f24ncmz61j56p4sdi9f76rk9fx9"))))
545 (build-system julia-build-system)
547 `(("julia-chainrulescore" ,julia-chainrulescore)
548 ("julia-compat" ,julia-compat)
549 ("julia-finitedifference" ,julia-finitedifferences)))
550 (home-page "https://github.com/JuliaDiff/ChainRulesTestUtils.jl")
551 (synopsis "Common utilities used by downstream automatic differentiation tools")
552 (description "This package is designed to help in testing
553 @code{ChainRulesCore.frule} and @code{ChainRulesCore.rrule} methods. The main
554 entry points are @code{ChainRulesTestUtils.frule_test},
555 @code{ChainRulesTestUtils.rrule_test}, and
556 @code{ChainRulesTestUtils.test_scalar}. Currently this is done via testing the
557 rules against numerical differentiation (using @code{FiniteDifferences.jl}).
559 @code{ChainRulesTestUtils.jl} is separated from @code{ChainRulesCore.jl} so that it
560 can be a test-only dependency, allowing it to have potentially heavy
561 dependencies, while keeping @code{ChainRulesCore.jl} as light-weight as possible.")
562 (license license:expat)))
564 (define-public julia-colors
566 (name "julia-colors")
572 (url "https://github.com/JuliaGraphics/Colors.jl")
573 (commit (string-append "v" version))))
574 (file-name (git-file-name name version))
576 (base32 "0kx3hq7rf8p5zx6ly9k5j90zijmc7yrwmy96cgkl2ibdfbnhmya3"))))
577 (build-system julia-build-system)
579 `(("julia-colortypes" ,julia-colortypes)
580 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
581 ("julia-reexport" ,julia-reexport)))
582 (home-page "https://github.com/JuliaGraphics/Colors.jl")
583 (synopsis "Tools for dealing with color")
584 (description "This package provides a wide array of functions for dealing
585 with color. This includes conversion between colorspaces, measuring distance
586 between colors, simulating color blindness, parsing colors, and generating
587 color scales for graphics.")
588 (license license:expat)))
590 (define-public julia-colorschemes
592 (name "julia-colorschemes")
598 (url "https://github.com/JuliaGraphics/ColorSchemes.jl")
599 (commit (string-append "v" version))))
600 (file-name (git-file-name name version))
602 (base32 "0kpjhmqd5cj8dh8bmh9b5g6bscyp7h23hzpr2s93pnrp57q1wvhq"))))
603 (build-system julia-build-system)
605 `(("julia-colors" ,julia-colors)
606 ("julia-colortypes" ,julia-colortypes)
607 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
608 ("julia-staticarrays" ,julia-staticarrays)))
609 (home-page "https://github.com/JuliaGraphics/ColorSchemes.jl")
610 (synopsis "Colorschemes, colormaps, gradients, and palettes")
611 (description "This package provides a collection of colorschemes.")
612 (license license:expat)))
614 (define-public julia-colortypes
616 (name "julia-colortypes")
622 (url "https://github.com/JuliaGraphics/ColorTypes.jl")
623 (commit (string-append "v" version))))
624 (file-name (git-file-name name version))
626 (base32 "0n7h70caqv7yd0khjhn90iax62r73mcif8qzkwj5b4q46li1r8ih"))))
628 '(#:tests? #f)) ;require Documenter, not packaged yet
629 (build-system julia-build-system)
631 `(("julia-fixedpointnumbers" ,julia-fixedpointnumbers)))
632 (home-page "https://github.com/JuliaGraphics/ColorTypes.jl")
633 (synopsis "Basic color types and constructor")
634 (description "This minimalistic package serves as the foundation for
635 working with colors in Julia. It defines basic color types and their
636 constructors, and sets up traits and show methods to make them easier to work
638 (license license:expat)))
640 (define-public julia-colorvectorspace
642 (name "julia-colorvectorspace")
648 (url "https://github.com/JuliaGraphics/ColorVectorSpace.jl")
649 (commit (string-append "v" version))))
650 (file-name (git-file-name name version))
652 (base32 "02gk7f5g5wjxdasbjf8bvv1m7clksh7mw1xmygjdirjz1q0d6dwi"))))
653 (build-system julia-build-system)
655 `(("julia-colortypes" ,julia-colortypes)
656 ("julia-specialfunctions" ,julia-specialfunctions)
657 ("julia-tensorcore" ,julia-tensorcore)))
659 `(("julia-colors" ,julia-colors)))
660 (home-page "https://github.com/JuliaGraphics/ColorVectorSpace.jl")
661 (synopsis "Treat colors as n-vectors for the purposes of arithmetic")
662 (description "This package is an add-on to @code{ColorTypes.jl} and provides
663 fast mathematical operations for objects with types such as RGB and Gray.
664 Specifically, with this package both grayscale and RGB colors are treated as if
665 they are points in a normed vector space.")
666 (license license:expat)))
668 (define-public julia-combinatorics
670 (name "julia-combinatorics")
676 (url "https://github.com/JuliaMath/Combinatorics.jl")
677 (commit (string-append "v" version))))
678 (file-name (git-file-name name version))
680 (base32 "0gafqkqi874zfm9h99akw9q95lk3ih5gip2h8p12fj9h7rvyf4j5"))))
681 (build-system julia-build-system)
682 (home-page "https://github.com/JuliaMath/Combinatorics.jl")
683 (synopsis "Combinatorics library for Julia")
684 (description "This package provides a combinatorics library for Julia,
685 focusing mostly (as of now) on enumerative combinatorics and permutations.")
686 (license license:expat)))
688 (define-public julia-commonsubexpressions
690 (name "julia-commonsubexpressions")
696 (url "https://github.com/rdeits/CommonSubexpressions.jl")
697 (commit (string-append "v" version))))
698 (file-name (git-file-name name version))
700 (base32 "0mgy90kk8ksv3l720kkk04gnhn4aqhh2dj4sp3x8yy3limngfjay"))))
701 (build-system julia-build-system)
703 `(("julia-macrotools" ,julia-macrotools)))
704 (home-page "https://github.com/rdeits/CommonSubexpressions.jl")
705 (synopsis "@code{@@cse} macro for Julia")
706 (description "This package provides the @code{@@cse} macro, which performs
707 common subexpression elimination.")
708 (license license:expat)))
710 (define-public julia-compat
712 (name "julia-compat")
718 (url "https://github.com/JuliaLang/Compat.jl")
719 (commit (string-append "v" version))))
720 (file-name (git-file-name name version))
722 (base32 "0qzvaqi5gqgc747fnajbvvf5vqbh6cwykwky00c7glvmvdsgk3z0"))))
723 (build-system julia-build-system)
724 (home-page "https://github.com/JuliaLang/Compat.jl")
725 (synopsis "Compatibility across Julia versions")
726 (description "The Compat package is designed to ease interoperability
727 between older and newer versions of the Julia language. The Compat package
728 provides a macro that lets you use the latest syntax in a backwards-compatible
730 (license license:expat)))
732 (define-public julia-configurations
734 (name "julia-configurations")
740 (url "https://github.com/Roger-luo/Configurations.jl")
741 (commit (string-append "v" version))))
742 (file-name (git-file-name name version))
744 (base32 "1b23p0zk8dx2sf01cnw177mqci7qd81b9s32ixz9clsh0r0icl1b"))))
745 (build-system julia-build-system)
748 (modify-phases %standard-phases
749 (add-after 'unpack 'fix-tests
751 (substitute* "test/runtests.jl"
752 (("option.toml") "test/option.toml"))
754 (add-after 'unpack 'dont-use-exproniconlite
756 (substitute* '("Project.toml"
757 "src/Configurations.jl"
759 (("ExproniconLite") "Expronicon"))
760 (substitute* "Project.toml"
761 (("55351af7-c7e9-48d6-89ff-24e801d99491")
762 "6b7a57c9-7cc1-4fdf-b7f5-e857abae3636"))
765 `(("julia-crayons" ,julia-crayons)
766 ("julia-expronicon" ,julia-expronicon)
767 ("julia-orderedcollections" ,julia-orderedcollections)))
768 (home-page "https://configurations.rogerluo.dev/stable/")
769 (synopsis "Tools for options and configurations in Julia")
770 (description "@code{Configurations.jl} provides a macro @code{@@option} to
771 let you define @code{structs} to represent options/configurations, and serialize
772 between different option/configuration file formats such as @code{TOML}.")
773 (license license:expat)))
775 (define-public julia-constructionbase
777 (name "julia-constructionbase")
783 (url "https://github.com/JuliaObjects/ConstructionBase.jl")
784 (commit (string-append "v" version))))
785 (file-name (git-file-name name version))
787 (base32 "1jk3h446vkv4yaavgm1hf1az7cwhppvhklvr08s49hhg02cm750q"))))
788 (build-system julia-build-system)
789 (home-page "https://juliaobjects.github.io/ConstructionBase.jl/dev/")
790 (synopsis "Primitive functions for construction of objects")
791 (description "This very lightweight package provides primitive functions
792 for construction of objects.")
793 (license license:expat)))
795 (define-public julia-coordinatetransformations
797 (name "julia-coordinatetransformations")
803 (url "https://github.com/JuliaGeometry/CoordinateTransformations.jl")
804 (commit (string-append "v" version))))
805 (file-name (git-file-name name version))
807 (base32 "15zbkn32v7xlz7559s0r5a0vkwmjwsswxaqpzijly4lky4jnp33d"))))
808 (build-system julia-build-system)
810 `(#:tests? #f)) ; Documenter.jl not packaged yet.
812 `(("julia-staticarrays" ,julia-staticarrays)))
814 ; `(("julia-documenter" ,julia-documenter)
815 ; ("julia-forwarddiff" ,julia-forwarddiff)
816 ; ("julia-unitful" ,julia-unitful)))
817 (home-page "https://github.com/JuliaGeometry/CoordinateTransformations.jl")
818 (synopsis "Coordinate transformations in Julia")
819 (description "@code{CoordinateTransformations} is a Julia package to manage
820 simple or complex networks of coordinate system transformations.
821 Transformations can be easily applied, inverted, composed, and differentiated
822 (both with respect to the input coordinates and with respect to transformation
823 parameters such as rotation angle). Transformations are designed to be
824 light-weight and efficient enough for, e.g., real-time graphical applications,
825 while support for both explicit and automatic differentiation makes it easy to
826 perform optimization and therefore ideal for computer vision applications such
827 as SLAM (simultaneous localization and mapping).")
828 (license license:expat)))
830 (define-public julia-crayons
832 (name "julia-crayons")
838 (url "https://github.com/KristofferC/Crayons.jl")
839 (commit (string-append "v" version))))
840 (file-name (git-file-name name version))
842 (base32 "0v3zhjlnb2914bxcj4myl8pgb7m31p77aj2k1bckmqs96jdph10z"))))
843 (build-system julia-build-system)
844 (home-page "https://github.com/KristofferC/Crayons.jl")
845 (synopsis "Colored and styled strings for terminals")
846 (description "Crayons is a package that makes it simple to write strings in
847 different colors and styles to terminals. It supports the 16 system colors,
848 both the 256 color and 24 bit true color extensions, and the different text
849 styles available to terminals.")
850 (license license:expat)))
852 (define-public julia-dataapi
854 (name "julia-dataapi")
860 (url "https://github.com/JuliaData/DataAPI.jl")
861 (commit (string-append "v" version))))
862 (file-name (git-file-name name version))
864 (base32 "0swk31p83fycz5cdj4fg6b0wfqj473lnx94q2fl7ybxkkc6afba7"))))
865 (build-system julia-build-system)
866 (home-page "https://github.com/JuliaData/DataAPI.jl")
867 (synopsis "Data-focused namespace for packages to share functions")
868 (description "This package provides a namespace for data-related generic
869 function definitions to solve the optional dependency problem; packages wishing
870 to share and/or extend functions can avoid depending directly on each other by
871 moving the function definition to DataAPI.jl and each package taking a
873 (license license:expat)))
875 (define-public julia-dataframes
877 (name "julia-dataframes")
883 (url "https://github.com/JuliaData/DataFrames.jl")
884 (commit (string-append "v" version))))
885 (file-name (git-file-name name version))
887 (base32 "1bk0amrghgjrkyn1mm4ac23swwbgszl1d0qyl9137qj5zvv9dasp"))))
888 (build-system julia-build-system)
891 (modify-phases %standard-phases
892 (add-after 'unpack 'skip-failing-test
894 ;; Tests with non-standard colors.
895 (substitute* "test/show.jl"
896 (("test (sprint\\(show, df, context=:color=>true)" _ test)
897 (string-append "test_nowarn " test)))
898 (substitute* "test/io.jl"
899 (("testset \\\"improved.*" all)
900 (string-append all "return\n")))
901 (substitute* "test/join.jl"
902 (("test (levels\\(outerjoin\\(B)" _ test)
903 (string-append "test_nowarn " test)))
906 `(("julia-dataapi" ,julia-dataapi)
907 ("julia-invertedindices" ,julia-invertedindices)
908 ("julia-iteratorinterfaceextensions" ,julia-iteratorinterfaceextensions)
909 ("julia-missings" ,julia-missings)
910 ("julia-pooledarrays" ,julia-pooledarrays)
911 ("julia-prettytables" ,julia-prettytables)
912 ("julia-reexport" ,julia-reexport)
913 ("julia-sortingalgorithms" ,julia-sortingalgorithms)
914 ("julia-tables" ,julia-tables)
915 ("julia-tabletraits" ,julia-tabletraits)))
917 `(("julia-categoricalarrays" ,julia-categoricalarrays)
918 ("julia-combinatorics" ,julia-combinatorics)
919 ("julia-datastructures" ,julia-datastructures)
920 ("julia-datavalues" ,julia-datavalues)
921 ("julia-offsetarrays" ,julia-offsetarrays)
922 ("julia-unitful" ,julia-unitful)))
923 (home-page "https://dataframes.juliadata.org/stable/")
924 (synopsis "In-memory tabular data")
925 (description "This package provides a set of tools for working with tabular
926 data in Julia. Its design and functionality are similar to those of Pandas from
927 Python or @code{data.frame}, @code{data.table} and @code{dplyr} from R, making
928 it a great general purpose data science tool, especially for those coming to
929 Julia from R or Python.")
930 (license license:expat)))
932 (define-public julia-datastructures
934 (name "julia-datastructures")
940 (url "https://github.com/JuliaCollections/DataStructures.jl")
941 (commit (string-append "v" version))))
942 (file-name (git-file-name name version))
944 (base32 "0hdqp8ipsqdw5bqqkdvz4j6n67x80sj5azr9vzyxwjfsgkfbnk2l"))))
946 `(("julia-compat" ,julia-compat)
947 ("julia-orderedcollections" ,julia-orderedcollections)))
948 (build-system julia-build-system)
949 (home-page "https://github.com/JuliaCollections/DataStructures.jl")
950 (synopsis "Julia module providing different data structures")
951 (description "This package implements a variety of data structures,
952 including, @code{CircularBuffer}, @code{Queue}, @code{Stack},
953 @code{Accumulators}, @code{LinkedLists}, @code{SortedDicts} and many others.")
954 (license license:expat)))
956 (define-public julia-datavalueinterfaces
958 (name "julia-datavalueinterfaces")
964 (url "https://github.com/queryverse/DataValueInterfaces.jl")
965 (commit (string-append "v" version))))
966 (file-name (git-file-name name version))
968 (base32 "0g2wj6q7jj956nx6g7dk8x7w1c4l2xcmnr1kq5x8s8fild9kslg8"))))
969 (build-system julia-build-system)
970 (home-page "https://github.com/queryverse/DataValueInterfaces.jl")
971 (synopsis "Interface for DataValues.jl")
972 (description "This package allows a few \"forward\" definitions for the
973 @code{DataValues.jl} package that other packages can utilize for integration
974 without having to take direct dependencies.")
975 (license license:expat)))
977 (define-public julia-datavalues
979 (name "julia-datavalues")
985 (url "https://github.com/queryverse/DataValues.jl")
986 (commit (string-append "v" version))))
987 (file-name (git-file-name name version))
989 (base32 "15j3hrqq6nazn533bfsvg32xznacbzsl303j1qs48av59ppnvhhv"))))
990 (build-system julia-build-system)
992 `(#:tests? #f ; Tests need upgrading with newer Julia version.
994 (modify-phases %standard-phases
995 (add-after 'unpack 'skip-known-failing-tests
997 ;; See upstream report:
998 ;; https://github.com/queryverse/DataValues.jl/issues/83
999 (substitute* "test/array/test_reduce.jl"
1000 ((".*DataValue\\(mapreduce.*") "")
1001 ((".*DataValue\\(method\\(f.*") ""))
1004 `(("julia-datavalueinterfaces" ,julia-datavalueinterfaces)))
1005 (home-page "https://github.com/queryverse/DataValues.jl")
1006 (synopsis "Missing values for Julia")
1007 (description "This package provides the type @code{DataValue} that is used
1008 to represent missing data.")
1009 (license license:expat)))
1011 (define-public julia-deepdiffs
1013 (name "julia-deepdiffs")
1019 (url "https://github.com/ssfrr/DeepDiffs.jl")
1020 (commit (string-append "v" version))))
1021 (file-name (git-file-name name version))
1023 (base32 "1gsbxb1d67g05h5bvzz3swdfih6404jrydy724a8dvbdgqvm3sds"))))
1024 (build-system julia-build-system)
1025 (home-page "https://github.com/ssfrr/DeepDiffs.jl")
1026 (synopsis "Compute and pretty-print diffs for data structures")
1027 (description "@code{DeepDiffs.jl} provides the @code{deepdiff} function,
1028 which finds and displays differences (diffs) between Julia data structures. It
1029 supports @code{Vectors}, @code{Dicts}, and @code{String}s. When diffing
1030 dictionaries where values associated with a particular key may change,
1031 @code{deepdiff} will recurse into value to provide a more detailed diff.")
1032 (license license:expat)))
1034 (define-public julia-dictionaries
1036 (name "julia-dictionaries")
1042 (url "https://github.com/andyferris/Dictionaries.jl")
1043 (commit (string-append "v" version))))
1044 (file-name (git-file-name name version))
1046 (base32 "1mm43hm8hd6sgmkkpqhbqhvap7mpkjwzmz5algxi6manp580gkr5"))))
1047 (build-system julia-build-system)
1049 `(("julia-indexing" ,julia-indexing)))
1050 (home-page "https://github.com/andyferris/Dictionaries.jl")
1051 (synopsis "Alternative interface for dictionaries in Julia")
1052 (description "This package provides an alternative interface for
1053 dictionaries in Julia, for improved productivity and performance.")
1054 (license license:expat)))
1056 (define-public julia-distances
1058 (name "julia-distances")
1064 (url "https://github.com/JuliaStats/Distances.jl")
1065 (commit (string-append "v" version))))
1066 (file-name (git-file-name name version))
1068 (base32 "1yqd9wg4z15k42mrp4y14j2x0sq7yrjhm5zpqklrw6w6j1c367ig"))))
1069 (build-system julia-build-system)
1072 (modify-phases %standard-phases
1073 (add-after 'unpack 'skip-flakey-tests
1075 ;; Some combination of these tests fail nondeterministically
1076 ;; each of the times this package is built.
1077 (substitute* "test/test_dists.jl"
1078 (("test dyz ≥") "test_nowarn dyz ≥")
1079 (("test dist\\(y, x") "test_nowarn dist(y, x")
1080 (("test dist\\(z, x") "test_nowarn dist(z, x")
1081 (("test dist\\(z, y") "test_nowarn dist(z, y")))))))
1083 `(("julia-statsapi" ,julia-statsapi)))
1085 `(("julia-offsetarrays" ,julia-offsetarrays)
1086 ("julia-unitful" ,julia-unitful)))
1087 (home-page "https://github.com/JuliaStats/Distances.jl")
1088 (synopsis "Julia package for evaluating distances (metrics) between vectors")
1089 (description "A Julia package for evaluating distances(metrics) between
1090 vectors. This package also provides optimized functions to compute column-wise
1091 and pairwise distances, which are often substantially faster than a
1092 straightforward loop implementation.")
1093 (license license:expat)))
1095 (define-public julia-docstringextensions
1097 (name "julia-docstringextensions")
1103 (url "https://github.com/JuliaDocs/DocStringExtensions.jl")
1104 (commit (string-append "v" version))))
1105 (file-name (git-file-name name version))
1107 (base32 "0fy4kfnfacyfmlly6nqxn77dk2gqw80b69zb4m1i0i39zv3cpqfb"))))
1108 (build-system julia-build-system)
1110 `(#:tests? #f)) ; Tests try to read SSL certificates.
1111 (home-page "https://juliadocs.github.io/DocStringExtensions.jl/latest/")
1112 (synopsis "Extensions for Julia's docsystem")
1113 (description "This package provides a collection of useful extensions for
1114 Julia's built-in docsystem. These are features that are not yet mature enough
1115 to be considered for inclusion in Base, or that have sufficiently niche use
1116 cases that including them with the default Julia installation is not seen as
1117 valuable enough at this time.")
1118 (license license:expat)))
1120 ;; By removing all the javascript and css downloads any HTML documentation
1121 ;; produced by this package will not be very useful.
1122 (define-public julia-documenter
1124 (name "julia-documenter")
1130 (url "https://github.com/JuliaDocs/Documenter.jl")
1131 (commit (string-append "v" version))))
1132 (file-name (git-file-name name version))
1134 (base32 "00ai3c24i3fkn5plmavampcxm0ijhwk0v5cn9xwm7rvbjnnvaaam"))))
1135 (build-system julia-build-system)
1138 (modify-phases %standard-phases
1139 (add-after 'unpack 'patch-source
1140 (lambda* (#:key inputs #:allow-other-keys)
1141 (substitute* "src/Deps.jl"
1143 (string-append (assoc-ref inputs "python")
1144 "/bin/pip install")))
1146 (add-after 'unpack 'remove-javascript-downloads
1148 (substitute* "src/Writers/HTMLWriter.jl"
1149 (("cdnjs.cloudflare.com") "example.com"))
1150 ;; Removing the javascript downloads causes these tests fail.
1151 (substitute* "test/examples/tests.jl"
1152 ((".*Main\\.examples_html_doc.*") "")
1153 ((".*Main\\.examples_html_mathjax3_doc.*") ""))
1156 `(("julia-ansicoloredprinters" ,julia-ansicoloredprinters)
1157 ("julia-docstringextensions" ,julia-docstringextensions)
1158 ("julia-iocapture" ,julia-iocapture)
1159 ("julia-json" ,julia-json)))
1161 `(("python" ,python-wrapper)))
1163 `(("git" ,git-minimal)
1164 ("julia-documentermarkdown" ,julia-documentermarkdown)
1165 ("julia-documentertools" ,julia-documentertools)))
1166 (home-page "https://juliadocs.github.io/Documenter.jl")
1167 (synopsis "Documentation generator for Julia")
1168 (description "This package provides a documentation generator for Julia.")
1169 (license license:expat)))
1171 (define julia-documenter-bootstrap
1173 (inherit julia-documenter)
1174 (name "julia-documenter-bootstrap")
1176 (substitute-keyword-arguments (package-arguments julia-documenter)
1178 `(modify-phases ,phases
1179 (delete 'patch-source)))
1180 ;; Not all dependencies available in bootstrap version.
1181 ((#:tests? _ #f) #f)))
1183 (native-inputs `())))
1185 (define-public julia-documentermarkdown
1187 (name "julia-documentermarkdown")
1193 (url "https://github.com/JuliaDocs/DocumenterMarkdown.jl")
1194 (commit (string-append "v" version))))
1195 (file-name (git-file-name name version))
1197 (base32 "0sx89hi5p2f8zi2rp5qrv06m270d90pxj5d2y5cxls1spax7wqx8"))))
1198 (build-system julia-build-system)
1200 ;; We don't want to propagate the bootstrap version.
1201 ;; Cycle with Documenter.jl in later versions.
1202 `(("julia-documenter" ,julia-documenter-bootstrap)))
1203 (home-page "https://github.com/JuliaDocs/DocumenterMarkdown.jl")
1204 (synopsis "Documenter's Markdown")
1205 (description "This package enables the Markdown / MkDocs backend of
1206 @code{Documenter.jl}.")
1207 (license license:expat)))
1209 (define-public julia-documentertools
1211 (name "julia-documentertools")
1217 (url "https://github.com/JuliaDocs/DocumenterTools.jl")
1218 (commit (string-append "v" version))))
1219 (file-name (git-file-name name version))
1221 (base32 "05p57p8xlkn42m1lv9gq4hl96vp7hpj19d51p828ai1rbpcpi3a6"))))
1222 (build-system julia-build-system)
1224 `(#:tests? #f)) ; Tests require network.
1226 ;; We don't want to propagate the bootstrap version.
1227 ;; Cycle with Documenter.jl in later versions.
1228 `(("julia-documenter" ,julia-documenter-bootstrap)))
1230 `(("julia-docstringextensions" ,julia-docstringextensions)
1231 ("julia-gumbo" ,julia-gumbo)
1232 ("julia-sass" ,julia-sass)))
1234 `(("julia-example" ,julia-example)))
1235 (home-page "https://github.com/JuliaDocs/DocumenterTools.jl")
1236 (synopsis "Extra tools for setting up Documenter.jl")
1237 (description "This package contains utilities for setting up documentation
1238 generation with @code{Documenter.jl}.")
1239 (license license:expat)))
1241 (define-public julia-diffresults
1243 (name "julia-diffresults")
1249 (url "https://github.com/JuliaDiff/DiffResults.jl")
1250 (commit (string-append "v" version))))
1251 (file-name (git-file-name name version))
1253 (base32 "1w6p3yxajvclax5b9g7cr2jmbc7lvr5nk4gq0aljxdycdq1d2y3v"))))
1255 `(("julia-staticarrays" ,julia-staticarrays)))
1256 (build-system julia-build-system)
1257 (home-page "https://github.com/JuliaDiff/DiffResults.jl")
1258 (synopsis "In-place differentiation methods of primal values at multi-order")
1259 (description "This package provides the @code{DiffResult} type, which can
1260 be passed to in-place differentiation methods instead of an output buffer.")
1261 (license license:expat)))
1263 (define-public julia-diffrules
1265 (name "julia-diffrules")
1271 (url "https://github.com/JuliaDiff/DiffRules.jl")
1272 (commit (string-append "v" version))))
1273 (file-name (git-file-name name version))
1275 (base32 "0cwjvj4gma7924fm3yas0nf0jlnwwx4v7fi79ii3s290lkdldzfl"))))
1277 `(("julia-nanmath" ,julia-nanmath)
1278 ("julia-specialfunctions" ,julia-specialfunctions)))
1279 (build-system julia-build-system)
1280 (home-page "https://github.com/JuliaDiff/DiffRules.jl")
1281 (synopsis "Primitive differentiation rules")
1282 (description "This package provides primitive differentiation rules that
1283 can be composed via various formulations of the chain rule. Using
1284 @code{DiffRules}, new differentiation rules can defined, query whether or not
1285 a given rule exists, and symbolically apply rules to simple Julia expressions.")
1286 (license license:expat)))
1288 (define-public julia-difftests
1290 (name "julia-difftests")
1296 (url "https://github.com/JuliaDiff/DiffTests.jl")
1297 (commit (string-append "v" version))))
1298 (file-name (git-file-name name version))
1300 (base32 "1rxpnd5zi3pxgdd38l5jm2sxc3q6p7g57fqgll2dsiin07y3my57"))))
1301 (build-system julia-build-system)
1302 (home-page "https://github.com/JuliaDiff/DiffTests.jl")
1303 (synopsis "Common test functions for differentiation tools")
1304 (description "This package contains a common suite of test functions for
1305 stressing the robustness of differentiation tools.")
1306 (license license:expat)))
1308 (define-public julia-dualnumbers
1310 (name "julia-dualnumbers")
1316 (url "https://github.com/JuliaDiff/DualNumbers.jl")
1317 (commit (string-append "v" version))))
1318 (file-name (git-file-name name version))
1320 (base32 "05vr5wbzqpchnb96b3pmn67x196mbfnkv7r9bdlz3gm56if4awk5"))))
1321 (build-system julia-build-system)
1324 (modify-phases %standard-phases
1325 (add-after 'unpack 'adjust-test-suite
1327 (substitute* "test/runtests.jl"
1328 ;; Seems to not play nicely with SpecialFunctions
1329 ((".*isempty.*") "")))))))
1331 `(("julia-calculus" ,julia-calculus)
1332 ("julia-nanmath" ,julia-nanmath)
1333 ("julia-specialfunctions" ,julia-specialfunctions)))
1334 (home-page "https://github.com/JuliaDiff/DualNumbers.jl")
1335 (synopsis "Represent dual numbers and for perform dual algebra")
1336 (description "The @code{DualNumbers} Julia package defines the @code{Dual}
1337 type to represent dual numbers, and supports standard mathematical operations on
1338 them. Conversions and promotions are defined to allow performing operations on
1339 combinations of dual numbers with predefined Julia numeric types.")
1340 (license license:expat)))
1342 (define-public julia-ellipsisnotation
1344 (name "julia-ellipsisnotation")
1350 (url "https://github.com/ChrisRackauckas/EllipsisNotation.jl")
1351 (commit (string-append "v" version))))
1352 (file-name (git-file-name name version))
1354 (base32 "0py46kxl702r8pw3v7x4cqllf7yc91b0dr7vb60xh2qi7d6y3jc7"))))
1355 (build-system julia-build-system)
1358 (modify-phases %standard-phases
1359 (add-after 'unpack 'adjust-test-suite
1361 (substitute* "test/runtests.jl"
1362 ;; Seems to not play nicely with Julia-1.6.
1363 ((".*basic.jl.*") "")))))))
1365 `(("julia-arrayinterface" ,julia-arrayinterface)))
1366 (home-page "https://github.com/ChrisRackauckas/EllipsisNotation.jl")
1367 (synopsis "Elipsis notation implementation")
1368 (description "This implements the notation @code{..} for indexing arrays.
1369 It's similar to the Python @code{...} in that it means \"all of the columns
1370 before (or after)\".")
1371 (license license:expat)))
1373 (define-public julia-example
1374 (let ((commit "f968c69dea24f851d0c7e686db23fa55826b5388"))
1376 (name "julia-example")
1377 (version "0.5.4") ;tag not created upstream
1382 (url "https://github.com/JuliaLang/Example.jl")
1384 (file-name (git-file-name name version))
1386 (base32 "1v3z0d6gh6wfbypffy9m9rhh36px6fm5wjzq0y6rbmc95r0qpqlx"))))
1387 (build-system julia-build-system)
1388 (home-page "https://github.com/JuliaLang/Example.jl")
1389 (synopsis "Module providing examples")
1390 (description "This package provides various examples.")
1391 (license license:expat))))
1393 ;; ExproniconLite.jl is autogenerated from this package.
1394 (define-public julia-expronicon
1396 (name "julia-expronicon")
1402 (url "https://github.com/Roger-luo/Expronicon.jl")
1403 (commit (string-append "v" version))))
1404 (file-name (git-file-name name version))
1406 (base32 "0h8aaynqlxrkn8575k5vqmhzil4vvxchhf0bcxa6zwawp558gj2y"))))
1407 (build-system julia-build-system)
1410 (modify-phases %standard-phases
1411 (add-after 'unpack 'skip-network-tests
1413 (substitute* "test/runtests.jl"
1414 ;; This test tries to access the Julia package registry.
1415 ((".*expand\\.jl.*") "")))))))
1417 `(("julia-mlstyle" ,julia-mlstyle)))
1419 `(("julia-documenter" ,julia-documenter)))
1420 (home-page "https://expronicon.rogerluo.dev/dev/")
1421 (synopsis "Collective tools for metaprogramming on Julia Expr")
1422 (description "This package provides a collection of tools for
1423 metaprogramming on Julia Expr, the meta programming standard library for
1425 (license license:expat)))
1427 (define-public julia-exprtools
1429 (name "julia-exprtools")
1435 (url "https://github.com/invenia/ExprTools.jl")
1436 (commit (string-append "v" version))))
1437 (file-name (git-file-name name version))
1439 (base32 "058ax5d96jpym5w3g37ah1c4xq3fskwpjdhchakzax15vqzy7ab4"))))
1440 (build-system julia-build-system)
1441 (home-page "https://github.com/invenia/ExprTools.jl")
1442 (synopsis "Light-weight expression manipulation tools")
1443 (description "@code{ExprTools} provides tooling for working with Julia
1444 expressions during metaprogramming. This package aims to provide light-weight
1445 performant tooling without requiring additional package dependencies.")
1446 (license license:expat)))
1448 (define-public julia-ffmpeg
1450 (name "julia-ffmpeg")
1456 (url "https://github.com/JuliaIO/FFMPEG.jl")
1457 (commit (string-append "v" version))))
1458 (file-name (git-file-name name version))
1460 (base32 "1ldxbp0kq3ip67x7sp82dz56aq4p5i0chspbgx2zgskr6jcbjj1b"))))
1461 (build-system julia-build-system)
1463 `(("julia-ffmpeg-jll" ,julia-ffmpeg-jll)
1464 ("julia-x264-jll" ,julia-x264-jll)))
1465 (home-page "https://github.com/JuliaIO/FFMPEG.jl")
1466 (synopsis "Julia Package for ffmpeg")
1467 (description "This package is made to be included into packages that just
1468 need the ffmpeg binaries + executables, and don't want the overhead of
1469 @code{VideoIO.jl}.")
1470 (license license:expat)))
1472 (define-public julia-fileio
1474 (name "julia-fileio")
1480 (url "https://github.com/JuliaIO/FileIO.jl")
1481 (commit (string-append "v" version))))
1482 (file-name (git-file-name name version))
1484 (base32 "1b18x43i737g5q41n9818xbnc2pgd98q1m6yw3h29yri0clg4gfx"))))
1485 (build-system julia-build-system)
1488 (modify-phases %standard-phases
1489 (delete 'reset-gzip-timestamps)
1490 (add-after 'unpack 'skip-network-tests
1492 ;; These tests try to download audio/video files.
1493 (substitute* "test/query.jl"
1494 (("testset.*(MP4|OGG|MATROSKA).*" all)
1495 (string-append all "return\n")))
1496 (substitute* "test/loadsave.jl"
1497 (("testset.*CSVFiles.*" all)
1498 (string-append all "return\n")))
1499 ;; This test tries to download a Julia package.
1500 (substitute* "test/error_handling.jl"
1501 (("testset.*Not installed.*" all)
1502 (string-append all "return\n")))
1503 ;; This test tries to write to the store.
1504 ;; (Error says can't find User 0)
1505 (substitute* "test/runtests.jl"
1506 ((".*test_mimesave.*") "")))))))
1508 `(("julia-requires" ,julia-requires)))
1510 `(("julia-colortypes" ,julia-colortypes)
1511 ("julia-filepathsbase" ,julia-filepathsbase)
1512 ("julia-http" ,julia-http)))
1513 (home-page "https://github.com/JuliaIO/FileIO.jl")
1514 (synopsis "Main Package for IO, loading all different kind of files")
1515 (description "@code{FileIO} aims to provide a common framework for detecting
1516 file formats and dispatching to appropriate readers/writers. The two core
1517 functions in this package are called @code{load} and @code{save}, and offer
1518 high-level support for formatted files (in contrast with Julia's low-level
1519 @code{read} and @code{write}).")
1520 (license license:expat)))
1522 (define-public julia-filepathsbase
1524 (name "julia-filepathsbase")
1530 (url "https://github.com/rofinn/FilePathsBase.jl")
1531 (commit (string-append "v" version))))
1532 (file-name (git-file-name name version))
1534 (base32 "136wm4ik6isrdanmpi4gdr1qw0qhr15i925qzjxbawk5hnyzwng9"))))
1535 (build-system julia-build-system)
1537 `(#:tests? #f)) ; Cycle with JLSO.jl
1538 (home-page "https://github.com/rofinn/FilePathsBase.jl")
1539 (synopsis "Filesystem path types in Julia")
1540 (description "@code{FilePathsBase.jl} provides a type based approach to
1541 working with filesystem paths in Julia.")
1542 (license license:expat)))
1544 (define-public julia-fillarrays
1546 (name "julia-fillarrays")
1552 (url "https://github.com/JuliaArrays/FillArrays.jl")
1553 (commit (string-append "v" version))))
1554 (file-name (git-file-name name version))
1556 (base32 "1sx96pzrgyh8k7x2w8vmyi6cazlmp7rg1n7wbl47qfzqjggka6kz"))))
1557 (build-system julia-build-system)
1558 (inputs ;required by tests
1559 `(("julia-staticarrays" ,julia-staticarrays)))
1560 (home-page "https://github.com/JuliaArrays/FillArrays.jl")
1561 (synopsis "Lazy matrix representation")
1562 (description "This package lazily represents matrices filled with
1563 a single entry, as well as identity matrices. This package exports the
1564 following types: @code{Eye}, @code{Fill}, @code{Ones}, @code{Zeros},
1565 @code{Trues} and @code{Falses}.")
1566 (license license:expat)))
1568 (define-public julia-finitediff
1570 (name "julia-finitediff")
1576 (url "https://github.com/JuliaDiff/FiniteDiff.jl")
1577 (commit (string-append "v" version))))
1578 (file-name (git-file-name name version))
1580 (base32 "105f6r0hq97n9mxf1nacmz94dpca66vzqj5p3zh4h0brshmggqnq"))))
1581 (build-system julia-build-system)
1584 (modify-phases %standard-phases
1585 (add-before 'check 'pre-check
1587 ;; We don't want to run all the tests; the Downstream tests
1588 ;; try to download the package registry.
1589 (setenv "GROUP" "Core")
1592 `(("julia-arrayinterface" ,julia-arrayinterface)
1593 ("julia-requires" ,julia-requires)
1594 ("julia-staticarrays" ,julia-staticarrays)))
1596 `(("julia-bandedmatrices" ,julia-bandedmatrices)
1597 ("julia-blockbandedmatrices" ,julia-blockbandedmatrices)
1598 ("julia-safetestsets" ,julia-safetestsets)))
1599 (home-page "https://github.com/JuliaDiff/FiniteDiff.jl")
1600 (synopsis "Calculations of gradients, Jacobians, and Hessians")
1601 (description "This package is for calculating derivatives, gradients,
1602 Jacobians, Hessians, etc. numerically. This library is for maximizing speed
1603 while giving a usable interface to end users in a way that specializes on array
1604 types and sparsity.")
1605 (license license:expat)))
1607 (define-public julia-finitedifferences
1609 (name "julia-finitedifferences")
1615 (url "https://github.com/JuliaDiff/FiniteDifferences.jl")
1616 (commit (string-append "v" version))))
1617 (file-name (git-file-name name version))
1619 (base32 "09nsf9cgk49yrvprflnhd9h5rrgs280rgj8sad3csghxdx6jqk5c"))))
1620 (build-system julia-build-system)
1622 `(("julia-benchmarktools" ,julia-benchmarktools)))
1624 `(("julia-chainrulescore" ,julia-chainrulescore)
1625 ("julia-richardson" ,julia-richardson)
1626 ("julia-staticarrays" ,julia-staticarrays)))
1627 (home-page "https://github.com/JuliaDiff/FiniteDifferences.jl")
1628 (synopsis "Estimates derivatives with finite differences")
1629 (description "This package calculates approximate derivatives numerically
1630 using finite difference.")
1631 (license license:expat)))
1633 (define-public julia-fixedpointnumbers
1635 (name "julia-fixedpointnumbers")
1641 (url "https://github.com/JuliaMath/FixedPointNumbers.jl")
1642 (commit (string-append "v" version))))
1643 (file-name (git-file-name name version))
1645 (base32 "0j0n40n04q9sk68wh9jq90m6c67k4ws02k41djjzkrqmpzv4rcdi"))))
1646 (build-system julia-build-system)
1649 (modify-phases %standard-phases
1650 (add-after 'unpack 'disable-failing-test
1651 (lambda* (#:key outputs #:allow-other-keys)
1652 (substitute* "test/fixed.jl"
1653 ;; A deprecation warning is not thrown
1654 (("@test_logs.*:warn" all) (string-append "# " all)))
1656 (propagated-inputs `(("julia-compat" ,julia-compat)))
1657 (home-page "https://github.com/JuliaMath/FixedPointNumbers.jl")
1658 (synopsis "Fixed point types for Julia")
1659 (description "@code{FixedPointNumbers.jl} implements fixed-point number
1660 types for Julia. A fixed-point number represents a fractional, or
1661 non-integral, number. In contrast with the more widely known floating-point
1662 numbers, with fixed-point numbers the decimal point doesn't \"float\":
1663 fixed-point numbers are effectively integers that are interpreted as being
1664 scaled by a constant factor. Consequently, they have a fixed number of
1665 digits (bits) after the decimal (radix) point.")
1666 (license license:expat)))
1668 (define-public julia-formatting
1670 (name "julia-formatting")
1676 (url "https://github.com/JuliaIO/Formatting.jl")
1677 (commit (string-append "v" version))))
1678 (file-name (git-file-name name version))
1680 (base32 "0ma3q9my51rr38bb5712xkc4h3rq0wsfjb4ac6mdh9ywn8rqvrmh"))))
1681 (build-system julia-build-system)
1682 (home-page "https://github.com/JuliaIO/Formatting.jl")
1683 (synopsis "Julia package to provide Python-like formatting support")
1684 (description "This package offers Python-style general formatting and
1685 c-style numerical formatting.")
1686 (license license:expat)))
1688 (define-public julia-forwarddiff
1690 (name "julia-forwarddiff")
1696 (url "https://github.com/JuliaDiff/ForwardDiff.jl")
1697 (commit (string-append "v" version))))
1698 (file-name (git-file-name name version))
1700 (base32 "1vb46x8mcn61g1l14qrk22c043khg2ml4q1ci7h4k2v34f2ak5fs"))))
1701 (build-system julia-build-system)
1702 (inputs ;required for tests
1703 `(("julia-calculus" ,julia-calculus)
1704 ("julia-difftests" ,julia-difftests)))
1706 `(("julia-commonsubexpressions" ,julia-commonsubexpressions)
1707 ("julia-diffresults" ,julia-diffresults)
1708 ("julia-diffrules" ,julia-diffrules)
1709 ("julia-nanmath" ,julia-nanmath)
1710 ("julia-specialfunctions" ,julia-specialfunctions)
1711 ("julia-staticarrays" ,julia-staticarrays)))
1712 (home-page "https://github.com/JuliaDiff/ForwardDiff.jl")
1713 (synopsis "Methods to take multidimensional derivatives")
1714 (description "This package implements methods to take derivatives,
1715 gradients, Jacobians, Hessians, and higher-order derivatives of native Julia
1716 functions (or any callable object, really) using forward mode automatic
1717 differentiation (AD).")
1718 (license license:expat)))
1720 (define-public julia-functionwrappers
1722 (name "julia-functionwrappers")
1728 (url "https://github.com/yuyichao/FunctionWrappers.jl")
1729 (commit (string-append "v" version))))
1730 (file-name (git-file-name name version))
1732 (base32 "02jilpjr7px6138dx2w7ixricvfgsxqdk84d9dgviranibhnjcxa"))))
1733 (build-system julia-build-system)
1736 (modify-phases %standard-phases
1737 (add-after 'unpack 'adjust-tests
1739 (substitute* "test/runtests.jl"
1740 (("testset \\\"Abstract.*" all)
1741 (string-append all "return\n"))))))))
1742 (home-page "https://github.com/yuyichao/FunctionWrappers.jl")
1743 (synopsis "Type stable and efficient wrapper of arbitrary functions")
1744 (description "This package provides a type stable and efficient wrapper of
1745 arbitrary functions.")
1746 (license license:expat)))
1748 (define-public julia-fuzzycompletions
1750 (name "julia-fuzzycompletions")
1756 (url "https://github.com/JunoLab/FuzzyCompletions.jl")
1757 (commit (string-append "v" version))))
1758 (file-name (git-file-name name version))
1760 (base32 "07sv88c472n6w4x7diy952igbcfm1s104ysnnvprld83312siw06"))))
1761 (build-system julia-build-system)
1764 (modify-phases %standard-phases
1765 (add-after 'unpack 'skip-failing-test
1767 (substitute* "test/runtests.jl"
1768 ((".*RPLE.*") "")))))))
1769 (home-page "https://github.com/JunoLab/FuzzyCompletions.jl")
1770 (synopsis "Fuzzy completion provider for Julia")
1772 "FuzzyCompletions provides fuzzy completions for a Julia runtime session.")
1773 (license license:expat)))
1775 (define-public julia-genericlinearalgebra
1777 (name "julia-genericlinearalgebra")
1783 (url "https://github.com/JuliaLinearAlgebra/GenericLinearAlgebra.jl")
1784 (commit (string-append "v" version))))
1785 (file-name (git-file-name name version))
1787 (base32 "0ndwypa397z3pwzdgc3s9plaqlqf63g3d4px5pvym5psgr6lnm3l"))))
1788 (build-system julia-build-system)
1791 (modify-phases %standard-phases
1792 (add-after 'unpack 'adjust-test-suite
1794 (substitute* "test/runtests.jl"
1795 ((".*lapack.*") "")))))))
1797 `(("julia-quaternions" ,julia-quaternions)))
1798 (home-page "https://github.com/JuliaLinearAlgebra/GenericLinearAlgebra.jl")
1799 (synopsis "Generic numerical linear algebra")
1800 (description "The purpose of this package is partly to extend linear algebra
1801 functionality in base to cover generic element types, e.g. @code{BigFloat} and
1802 @code{Quaternion}, and partly to be a place to experiment with fast linear
1803 algebra routines written in Julia (except for optimized BLAS).")
1804 (license license:expat)))
1806 (define-public julia-genericschur
1808 (name "julia-genericschur")
1814 (url "https://github.com/RalphAS/GenericSchur.jl")
1815 (commit (string-append "v" version))))
1816 (file-name (git-file-name name version))
1818 (base32 "12x6lxzxm91y3k6s9dam46dq5hrby5sr0gy0fdfnp0xhjzdy2j0d"))))
1819 (build-system julia-build-system)
1822 (modify-phases %standard-phases
1823 (add-after 'unpack 'adjust-test-suite
1825 (substitute* "test/complex.jl"
1826 ;; expected Array{Int32,1}, got a value of type Array{Int64,1}
1827 (("A = _example") "#A = _example")
1828 (("schurtest\\(A,20\\)") ""))
1829 (substitute* "test/runtests.jl"
1830 ;; Test errors relating to liblapack.so
1831 ((".*complex\\.jl.*") "")
1832 ((".*real\\.jl.*") "")
1833 ;; GenericSVD is deprecated upstream
1834 ((".*gordschur\\.jl.*") "")))))))
1835 (home-page "https://github.com/RalphAS/GenericSchur.jl")
1836 (synopsis "Schur decomposition of matrices with generic element types")
1837 (description "The Schur decomposition is the workhorse for eigensystem
1838 analysis of dense matrices. The diagonal eigen-decomposition of normal
1839 (especially Hermitian) matrices is an important special case, but for non-normal
1840 matrices the Schur form is often more useful.")
1841 (license license:expat)))
1843 (define-public julia-graphics
1845 (name "julia-graphics")
1851 (url "https://github.com/JuliaGraphics/Graphics.jl")
1852 (commit (string-append "v" version))))
1853 (file-name (git-file-name name version))
1855 (base32 "10h1s09v7qkvrjr6l678zamb1p248n8jv4rrwkf8g7d2bpfz9amn"))))
1856 (build-system julia-build-system)
1858 `(("julia-colors" ,julia-colors)
1859 ("julia-nanmath" ,julia-nanmath)))
1860 (home-page "https://github.com/JuliaGraphics/Graphics.jl")
1861 (synopsis "Base graphics in Julia")
1862 (description "@code{Graphics.jl} is an abstraction layer for graphical
1863 operations in Julia.")
1864 (license license:expat)))
1866 (define-public julia-gumbo
1868 (name "julia-gumbo")
1874 (url "https://github.com/JuliaWeb/Gumbo.jl")
1875 (commit (string-append "v" version))))
1876 (file-name (git-file-name name version))
1878 (base32 "1g22dv3v7caakspv3pdahnqn937fzzsg9y87rj72hid9g8lxl1gm"))))
1879 (build-system julia-build-system)
1881 `(("julia-abstracttrees" ,julia-abstracttrees)
1882 ("julia-gumbo-jll" ,julia-gumbo-jll)))
1883 (home-page "https://github.com/JuliaWeb/Gumbo.jl")
1884 (synopsis "Julia wrapper around Google's gumbo C library for parsing HTML")
1885 (description "@code{Gumbo.jl} is a Julia wrapper around Google's gumbo
1886 library for parsing HTML.")
1887 (license license:expat)))
1889 (define-public julia-http
1897 (url "https://github.com/JuliaWeb/HTTP.jl")
1898 (commit (string-append "v" version))))
1899 (file-name (git-file-name name version))
1901 (base32 "1jsyk3mhnwj4h19cxclx26igdqdrw51fd3k1hgav0nm67dy4cxyk"))))
1902 (build-system julia-build-system)
1905 (modify-phases %standard-phases
1906 (add-before 'install 'disable-network-tests
1908 (substitute* "test/runtests.jl"
1909 (("\"async.jl") "# \"async.jl")
1910 (("\"client.jl") "# \"client.jl"))
1911 (substitute* "test/aws4.jl"
1912 (("@testset.*HTTP.request with AWS authentication.*" all)
1913 (string-append all "return\n")))
1914 (substitute* "test/insert_layers.jl"
1915 (("@testset.*Inserted final layer runs handler.*" all)
1916 (string-append all "return\n")))
1917 (substitute* "test/multipart.jl"
1918 (("@testset \"Setting of Content-Type.*" all)
1919 (string-append all "return\n"))
1920 (("@testset \"Deprecation of .*" all)
1921 (string-append all "return\n")))
1922 (substitute* "test/websockets.jl"
1923 (("@testset.*External Host.*" all)
1924 (string-append all "return\n")))
1925 (substitute* "test/messages.jl"
1926 (("@testset.*Read methods.*" all)
1927 (string-append all "return\n"))
1928 (("@testset.*Body - .*" all)
1929 (string-append all "return\n"))
1930 (("@testset.*Write to file.*" all)
1931 (string-append all "return\n")))
1934 `(("julia-inifile" ,julia-inifile)
1935 ("julia-mbedtls" ,julia-mbedtls)
1936 ("julia-uris" ,julia-uris)))
1937 ;; required for tests
1939 `(("julia-json" ,julia-json)
1940 ("julia-bufferedstreams" ,julia-bufferedstreams)))
1941 (home-page "https://juliaweb.github.io/HTTP.jl/")
1942 (synopsis "HTTP support for Julia")
1943 (description "@code{HTTP.jl} is a Julia library for HTTP Messages,
1944 implementing both a client and a server.")
1945 (license license:expat)))
1947 (define-public julia-identityranges
1949 (name "julia-identityranges")
1955 (url "https://github.com/JuliaArrays/IdentityRanges.jl")
1956 (commit (string-append "v" version))))
1957 (file-name (git-file-name name version))
1959 (base32 "0jvl4xn8f8k70sn473li5q62wbiycl5qi25b5k456h3a0j1lbiml"))))
1960 (build-system julia-build-system)
1962 `(("julia-offsetarrays" ,julia-offsetarrays)))
1963 (home-page "https://github.com/JuliaArrays/IdentityRanges.jl")
1964 (synopsis "Ranges that preserve indices of views")
1965 (description "@code{IdentityRanges} are Julia-language a helper type for
1966 creating \"views\" of arrays. They are a custom type of AbstractUnitRange that
1967 makes it easy to preserve the indices of array views. The key property of an
1968 @code{IdentityRange r} is that @code{r[i] == i} (hence the name of the
1969 type/package), and that they support arbitrary start/stop indices (i.e., not
1970 just starting at 1).")
1971 (license license:expat)))
1973 (define-public julia-ifelse
1975 (name "julia-ifelse")
1981 (url "https://github.com/sciml/ifelse.jl")
1982 (commit (string-append "v" version))))
1983 (file-name (git-file-name name version))
1985 (base32 "1wrw842r8708fryf2ihp9mkmdrg27saa9nix2c31vs995k2fgr9w"))))
1986 (build-system julia-build-system)
1987 (home-page "https://github.com/sciml/ifelse.jl")
1988 (synopsis "Function form of the if-else conditional statement")
1989 (description "This package provides a convenient function form of the
1990 conditional ifelse. It is similar to @code{Core.ifelse} but it is extendable.")
1991 (license license:expat)))
1993 (define-public julia-imageaxes
1995 (name "julia-imageaxes")
2001 (url "https://github.com/JuliaImages/ImageAxes.jl")
2002 (commit (string-append "v" version))))
2003 (file-name (git-file-name name version))
2005 (base32 "15zqxani1jjh8849s7rdps6b6prqdwv8yxx893y536vkpk7i07qd"))))
2006 (build-system julia-build-system)
2008 `(("julia-axisarrays" ,julia-axisarrays)
2009 ("julia-imagecore" ,julia-imagecore)
2010 ("julia-reexport" ,julia-reexport)
2011 ("julia-simpletraits" ,julia-simpletraits)))
2013 `(("julia-unitful" ,julia-unitful)))
2014 (home-page "https://github.com/JuliaImages/ImageAxes.jl")
2015 (synopsis "Julia package for giving \"meaning\" to the axes of an image")
2016 (description "This small package supports the representation of images as
2017 @code{AxisArrays} to endow the axes with \"meaning,\" and makes programming with
2018 such arrays easy via traits.")
2019 (license license:expat)))
2021 (define-public julia-imagebase
2023 (name "julia-imagebase")
2029 (url "https://github.com/JuliaImages/ImageBase.jl")
2030 (commit (string-append "v" version))))
2031 (file-name (git-file-name name version))
2033 (base32 "1n63f2zs6ail9pcl7rzgv3l0z8v1idjsaza3zgvgy7iacxsdpcj2"))))
2034 (build-system julia-build-system)
2036 `(#:tests? #f)) ; Cycle with ImageMagick.jl.
2038 `(("julia-imagecore" ,julia-imagecore)
2039 ("julia-reexport" ,julia-reexport)))
2041 ; `(("julia-imagemagick" ,julia-imagemagick)
2042 ; ("julia-offsetarrays" ,julia-offsetarrays)
2043 ; ("julia-testimages" ,julia-testimages)))
2044 (home-page "https://github.com/JuliaImages/ImageBase.jl")
2045 (synopsis "Wrapper package around ImageCore")
2046 (description "This is a twin package to @code{ImageCore} with functions that
2047 are used among many of the packages in JuliaImages. The main purpose of this
2048 package is to reduce unnecessary compilation overhead from external
2050 (license license:expat)))
2052 (define-public julia-imagecore
2054 (name "julia-imagecore")
2060 (url "https://github.com/JuliaImages/ImageCore.jl")
2061 (commit (string-append "v" version))))
2062 (file-name (git-file-name name version))
2064 (base32 "0h9m3pl3wic1jrgaqkdifz24cya5vxd3m6qdmm37pxg2y2ii2vcq"))))
2065 (build-system julia-build-system)
2067 `(#:tests? #f)) ; Cycle with ImageMagick.jl.
2069 `(("julia-abstractffts" ,julia-abstractffts)
2070 ("julia-colors" ,julia-colors)
2071 ("julia-colorvectorspace" ,julia-colorvectorspace)
2072 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
2073 ("julia-graphics" ,julia-graphics)
2074 ("julia-mappedarrays" ,julia-mappedarrays)
2075 ("julia-mosaicviews" ,julia-mosaicviews)
2076 ("julia-offsetarrays" ,julia-offsetarrays)
2077 ("julia-paddedviews" ,julia-paddedviews)
2078 ("julia-reexport" ,julia-reexport)))
2080 ; `(("julia-aqua" ,julia-aqua)
2081 ; ("julia-colorvectorspace" ,julia-colorvectorspace)
2082 ; ("julia-documenter" ,julia-documenter)
2083 ; ("julia-fftw" ,julia-fftw)
2084 ; ("julia-imageinterminal" ,julia-imageinterminal)
2085 ; ("julia-imagemagick" ,julia-imagemagick)
2086 ; ("julia-referencetests" ,julia-referencetests)
2087 ; ("julia-statistics" ,julia-statistics)))
2088 (home-page "https://github.com/JuliaImages/ImageCore.jl")
2089 (synopsis "Julia types for representing images")
2090 (description "@code{ImageCore} is the lowest-level component of the system
2091 of packages designed to support image processing and computer vision.")
2092 (license license:expat)))
2094 (define-public julia-imageinterminal
2096 (name "julia-imageinterminal")
2102 (url "https://github.com/JuliaImages/ImageInTerminal.jl")
2103 (commit (string-append "v" version))))
2104 (file-name (git-file-name name version))
2106 (base32 "0bbpzi7bv8jdiggq1wmcn67vnf96qagvwg0fk95s125wy5980xsl"))))
2107 (build-system julia-build-system)
2109 `(#:tests? #f)) ; Cycle with ReferenceTests.jl.
2111 `(("julia-crayons" ,julia-crayons)
2112 ("julia-imagebase" ,julia-imagebase)
2113 ("julia-imagecore" ,julia-imagecore)
2114 ("julia-requires" ,julia-requires)))
2116 ; `(("julia-coordinatetransformations" ,julia-coordinatetransformations)
2117 ; ("julia-imagemagick" ,julia-imagemagick)
2118 ; ("julia-imagetransformations" ,julia-imagetransformations)
2119 ; ("julia-offsetarrays" ,julia-offsetarrays)
2120 ; ("julia-referencetests" ,julia-referencetests)
2121 ; ("julia-rotations" ,julia-rotations)
2122 ; ("julia-sparsearrays" ,julia-sparsearrays)
2123 ; ("julia-testimages" ,julia-testimages)))
2124 (home-page "https://github.com/JuliaImages/ImageInTerminal.jl")
2125 (synopsis "Julia package for displaying images in the terminal")
2126 (description "@code{ImageInTerminal.jl} is a drop-in package that once
2127 imported changes a how a single @code{Colorant} and whole @code{Colorant} arrays
2128 (i.e. Images) are displayed in the interactive REPL. The displayed images will
2129 be downscaled to fit into the size of your active terminal session.")
2130 (license license:expat)))
2132 (define-public julia-imagemagick
2134 (name "julia-imagemagick")
2140 (url "https://github.com/JuliaIO/ImageMagick.jl")
2141 (commit (string-append "v" version))))
2142 (file-name (git-file-name name version))
2144 (base32 "05vzv4jsj3l9pv6yrix28hlw7wnag0mqdfjwv8shn4x71hcfxl1p"))))
2145 (build-system julia-build-system)
2148 (modify-phases %standard-phases
2149 (add-after 'unpack 'skip-failing-test
2151 ;; These tests try to download from the imagemagick.org
2152 (substitute* "test/runtests.jl"
2153 ((".*readremote\\.jl.*") ""))
2154 ;; Tests with the color gray are hard.
2155 (substitute* "test/constructed_images.jl"
2156 (("test (b == aa)" _ test) (string-append "test_nowarn " test))
2157 (("test (B == map)" _ test) (string-append "test_nowarn " test)))
2160 `(("julia-fileio" ,julia-fileio)
2161 ("julia-imagecore" ,julia-imagecore)
2162 ("julia-imagemagick-jll" ,julia-imagemagick-jll)))
2164 `(("julia-colors" ,julia-colors)
2165 ("julia-colorvectorspace" ,julia-colorvectorspace)
2166 ("julia-imagemetadata" ,julia-imagemetadata)
2167 ("julia-imageshow" ,julia-imageshow)
2168 ("julia-imagetransformations" ,julia-imagetransformations)
2169 ("julia-indirectarrays" ,julia-indirectarrays)
2170 ("julia-offsetarrays" ,julia-offsetarrays)
2171 ("julia-zipfile" ,julia-zipfile)))
2172 (home-page "https://github.com/JuliaIO/ImageMagick.jl")
2173 (synopsis "Thin wrapper for ImageMagick")
2174 (description "This package provides a wrapper around ImageMagick version 6.
2175 It was split off from @code{Images.jl} to make image I/O more modular.")
2176 (license license:expat)))
2178 (define-public julia-imagemetadata
2180 (name "julia-imagemetadata")
2186 (url "https://github.com/JuliaImages/ImageMetadata.jl")
2187 (commit (string-append "v" version))))
2188 (file-name (git-file-name name version))
2190 (base32 "0iv154ms370xgcr56bwsjl13iwmy671cbxjl9ld5yfj85pclcwi1"))))
2191 (build-system julia-build-system)
2193 `(("julia-axisarrays" ,julia-axisarrays)
2194 ("julia-imageaxes" ,julia-imageaxes)
2195 ("julia-imagecore" ,julia-imagecore)
2196 ("julia-indirectarrays" ,julia-indirectarrays)))
2198 `(("julia-offsetarrays" ,julia-offsetarrays)
2199 ("julia-simpletraits" ,julia-simpletraits)
2200 ("julia-unitful" ,julia-unitful)))
2201 (home-page "https://github.com/JuliaImages/ImageMetadata.jl")
2202 (synopsis "Julia package for images having metadata")
2203 (description "@code{ImageMetadata} is a simple package providing utilities
2204 for working with images that have metadata attached. For example, you might
2205 want to associate an image with the date on which the picture was taken, or an
2206 MRI scan with patient data, or an astronomical image with sky coordinates and
2207 information about the detector used to acquire the image.")
2208 (license license:expat)))
2210 (define-public julia-imageshow
2212 (name "julia-imageshow")
2218 (url "https://github.com/JuliaImages/ImageShow.jl")
2219 (commit (string-append "v" version))))
2220 (file-name (git-file-name name version))
2222 (base32 "00wq3ab8y6nyhxwc5lpz9dnslsmcr1vg3cjdkh7wb7k6a8bw98mh"))))
2223 (build-system julia-build-system)
2225 `(#:tests? #f)) ; cycle with ImageMagick.jl.
2227 `(("julia-fileio" ,julia-fileio)
2228 ("julia-imagebase" ,julia-imagebase)
2229 ("julia-imagecore" ,julia-imagecore)
2230 ("julia-offsetarrays" ,julia-offsetarrays)
2231 ("julia-stackviews" ,julia-stackviews)))
2233 ; `(("julia-imagedistances" ,julia-imagedistances)
2234 ; ("julia-imagemagick" ,julia-imagemagick)
2235 ; ("julia-suppressor" ,julia-suppressor)
2236 ; ("julia-testimages" ,julia-testimages)))
2237 (home-page "https://github.com/JuliaImages/ImageShow.jl")
2239 "Inline graphical display of images in Julia graphical environments")
2240 (description "This package implements image @code{show} methods suitable
2241 for graphical platforms such as IJulia. It is intended to provide convenient
2242 inline presentation of greyscale or color images.")
2243 (license license:expat)))
2245 (define-public julia-imagetransformations
2247 (name "julia-imagetransformations")
2253 (url "https://github.com/JuliaImages/ImageTransformations.jl")
2254 (commit (string-append "v" version))))
2255 (file-name (git-file-name name version))
2257 (base32 "0i8gw68hljshsy9wdl5mrpbb31irhmayqyglsxi7jwm88iy9pxhm"))))
2258 (build-system julia-build-system)
2260 `(#:tests? #f)) ; Cycle with ImageMagick.jl.
2262 `(("julia-axisalgorithms" ,julia-axisalgorithms)
2263 ("julia-colorvectorspace" ,julia-colorvectorspace)
2264 ("julia-coordinatetransformations" ,julia-coordinatetransformations)
2265 ("julia-identityranges" ,julia-identityranges)
2266 ("julia-imagecore" ,julia-imagecore)
2267 ("julia-interpolations" ,julia-interpolations)
2268 ("julia-offsetarrays" ,julia-offsetarrays)
2269 ("julia-rotations" ,julia-rotations)
2270 ("julia-staticarrays" ,julia-staticarrays)))
2272 ; `(("julia-imagemagick" ,julia-imagemagick)
2273 ; ("julia-referencetests" ,julia-referencetests)
2274 ; ("julia-testimages" ,julia-testimages)))
2275 (home-page "https://github.com/JuliaImages/ImageTransformations.jl")
2276 (synopsis "Geometric transformations on images for Julia")
2277 (description "This package provides support for image resizing, image
2278 rotation, and other spatial transformations of arrays.")
2279 (license license:expat)))
2281 (define-public julia-indexing
2283 (name "julia-indexing")
2289 (url "https://github.com/andyferris/Indexing.jl")
2290 (commit (string-append "v" version))))
2291 (file-name (git-file-name name version))
2293 (base32 "1s7bz5aaj9sx753pcaixq83jgbk33adxgybpinjgzb9lzdv1ddgx"))))
2294 (build-system julia-build-system)
2295 (home-page "https://github.com/andyferris/Indexing.jl")
2296 (synopsis "Generalized indexing for Julia")
2297 (description "This package defines functions for getting multiple indices
2298 out of dictionaries, tuples, etc, extending this ability beyond
2299 @code{AbstractArray}.")
2300 (license license:expat)))
2302 (define-public julia-indirectarrays
2304 (name "julia-indirectarrays")
2310 (url "https://github.com/JuliaArrays/IndirectArrays.jl")
2311 (commit (string-append "v" version))))
2312 (file-name (git-file-name name version))
2314 (base32 "0l0jq0jnr9z3k431ni82xycq7mqapgxrbrx4yyk6lycvi41ipm4s"))))
2315 (build-system julia-build-system)
2317 `(("julia-colors" ,julia-colors)
2318 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
2319 ("julia-mappedarrays" ,julia-mappedarrays)))
2320 (home-page "https://github.com/JuliaArrays/IndirectArrays.jl")
2321 (synopsis "Julia implementation of indexed arrays")
2322 (description "An @code{IndirectArray} is one that encodes data using a
2323 combination of an @code{index} and a @code{value} table. Each element is
2324 assigned its own index, which is used to retrieve the value from the
2325 @code{value} table. Among other uses, @code{IndirectArrays} can represent
2326 indexed images, sometimes called \"colormap images\" or \"paletted images.\"")
2327 (license license:expat)))
2329 (define-public julia-inifile
2331 (name "julia-inifile")
2337 (url "https://github.com/JuliaIO/IniFile.jl")
2338 (commit "8ba59958495fa276d6489d2c3903e765d75e0bc0")))
2339 (file-name (git-file-name name version))
2341 (base32 "11h6f99jpbg729lplw841m68jprka7q3n8yw390bndlmcdsjabpd"))))
2342 (build-system julia-build-system)
2343 (home-page "https://github.com/JuliaIO/IniFile.jl")
2344 (synopsis "Reading Windows-style INI files")
2345 (description "This is a Julia package that defines an IniFile type that
2346 interfaces with @file{.ini} files.")
2347 (license license:expat)))
2349 (define-public julia-interpolations
2351 (name "julia-interpolations")
2357 (url "https://github.com/JuliaMath/Interpolations.jl")
2358 (commit (string-append "v" version))))
2359 (file-name (git-file-name name version))
2361 (base32 "1236c20k388qlh7k74mhf7hkbn0vf7ss8b1rgh1a6aj0234ayfnc"))))
2362 (build-system julia-build-system)
2364 `(("julia-axisalgorithms" ,julia-axisalgorithms)
2365 ("julia-offsetarrays" ,julia-offsetarrays)
2366 ("julia-ratios" ,julia-ratios)
2367 ("julia-requires" ,julia-requires)
2368 ("julia-staticarrays" ,julia-staticarrays)
2369 ("julia-woodburymatrices" ,julia-woodburymatrices)))
2371 `(("julia-dualnumbers" ,julia-dualnumbers)
2372 ("julia-forwarddiff" ,julia-forwarddiff)
2373 ("julia-offsetarrays" ,julia-offsetarrays)
2374 ("julia-unitful" ,julia-unitful)
2375 ("julia-zygote" ,julia-zygote)))
2376 (home-page "https://github.com/JuliaMath/Interpolations.jl")
2377 (synopsis "Continuous interpolation of discrete datasets")
2378 (description "This package implements a variety of interpolation schemes for
2379 the Julia language. It has the goals of ease-of-use, broad algorithmic support,
2380 and exceptional performance.")
2381 (license license:expat)))
2383 (define-public julia-intervalsets
2385 (name "julia-intervalsets")
2391 (url "https://github.com/JuliaMath/IntervalSets.jl")
2392 (commit (string-append "v" version))))
2393 (file-name (git-file-name name version))
2395 (base32 "0gsz89cd3iygbl5qr389k9vwpg7w1nk0s90g25nsmk34y9hifxag"))))
2396 (build-system julia-build-system)
2398 `(("julia-ellipsisnotation" ,julia-ellipsisnotation)))
2400 `(("julia-offsetarrays" ,julia-offsetarrays)))
2401 (home-page "https://github.com/JuliaMath/IntervalSets.jl")
2402 (synopsis "Interval Sets for Julia")
2403 (description "This package is intended to implement a \"minimal\" foundation
2404 for intervals upon which other packages might build. In particular, we
2405 encourage type-piracy for the reason that only one interval package can
2406 unambiguously define the @code{..} and @code{±} operators.")
2407 (license license:expat)))
2409 (define-public julia-invertedindices
2411 (name "julia-invertedindices")
2417 (url "https://github.com/mbauman/InvertedIndices.jl")
2418 (commit (string-append "v" version))))
2419 (file-name (git-file-name name version))
2421 (base32 "1179z20yxnkyziip7gn26wr1g3k3ssl1ci7pig3khc900f62di46"))))
2422 (build-system julia-build-system)
2424 `(("julia-offsetarrays" ,julia-offsetarrays)))
2425 (home-page "https://github.com/mbauman/InvertedIndices.jl")
2426 (synopsis "Index type that allows for inverted selections")
2427 (description "This package just exports one type: the @code{InvertedIndex},
2428 or @code{Not} for short. It can wrap any supported index type and may be used
2429 as an index into any @code{AbstractArray} subtype, including OffsetArrays.")
2430 (license license:expat)))
2432 (define-public julia-iocapture
2434 (name "julia-iocapture")
2440 (url "https://github.com/JuliaDocs/IOCapture.jl")
2441 (commit (string-append "v" version))))
2442 (file-name (git-file-name name version))
2444 (base32 "0v76wbvg80g9nx0rjbcna82zk61krly1y9yhyfrjv2pf7mcr4idb"))))
2445 (build-system julia-build-system)
2446 (home-page "https://github.com/JuliaDocs/IOCapture.jl")
2447 (synopsis "Capture standard output and error streams")
2448 (description "This package provides the @code{IOCapture.capture(f)}
2449 function, which captures the standard output and standard error, and returns it
2450 as a string together with the return value.")
2451 (license license:expat)))
2453 (define-public julia-irtools
2455 (name "julia-irtools")
2461 (url "https://github.com/FluxML/IRTools.jl")
2462 (commit (string-append "v" version))))
2463 (file-name (git-file-name name version))
2465 (base32 "11334fcg2slpwcj0raxf457brhf7pxglgxc6cy8q58ggrpxqfqql"))))
2467 '(#:tests? #f)) ;require Documenter, not packaged yet
2468 (build-system julia-build-system)
2470 `(("julia-macrotools" ,julia-macrotools)))
2471 (home-page "https://github.com/FluxML/IRTools.jl")
2472 (synopsis "Simple and flexible IR format")
2473 (description "This package provides a simple and flexible IR format,
2474 expressive enough to work with both lowered and typed Julia code, as well as
2475 external IRs. It can be used with Julia metaprogramming tools such as
2477 (license license:expat)))
2479 (define-public julia-iteratorinterfaceextensions
2481 (name "julia-iteratorinterfaceextensions")
2487 (url "https://github.com/queryverse/IteratorInterfaceExtensions.jl")
2488 (commit (string-append "v" version))))
2489 (file-name (git-file-name name version))
2491 (base32 "1slpay1dhja8f9gy6z7b3psgvgcknn963dvfqqakvg1grk9ppa09"))))
2492 (build-system julia-build-system)
2493 (home-page "https://github.com/queryverse/IteratorInterfaceExtensions.jl")
2494 (synopsis "Traits for Julia iterators")
2495 (description "IteratorInterfaceExtensions defines a small number of
2496 extensions to the iterator interface.")
2497 (license license:expat)))
2499 (define-public julia-itertools
2501 (name "julia-itertools")
2507 (url "https://github.com/JuliaCollections/IterTools.jl")
2508 (commit (string-append "v" version))))
2509 (file-name (git-file-name name version))
2511 (base32 "0haf974kcqj6arv4if97ahs4w3dmvslh6ab3hl57r9s41ic36xdq"))))
2512 (build-system julia-build-system)
2513 (home-page "https://github.com/JuliaCollections/IterTools.jl")
2514 (synopsis "Common functional iterator patterns")
2516 "Common functional iterator patterns (formerly @code{Iterators.jl}).")
2517 (license license:expat)))
2519 (define-public julia-json
2527 (url "https://github.com/JuliaIO/JSON.jl")
2528 (commit (string-append "v" version))))
2529 (file-name (git-file-name name version))
2531 (base32 "1f9k613kbknmp4fgjxvjaw4d5sfbx8a5hmcszmp1w9rqfqngjx9m"))))
2532 (build-system julia-build-system)
2534 `(("julia-datastructures" ,julia-datastructures)
2535 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
2536 ("julia-parsers" ,julia-parsers)
2537 ("julia-offsetarrays" ,julia-offsetarrays)))
2538 (home-page "https://github.com/JuliaIO/JSON.jl")
2539 (synopsis "JSON parsing and printing library for Julia")
2540 (description "@code{JSON.jl} is a pure Julia module which supports parsing
2541 and printing JSON documents.")
2542 (license license:expat)))
2544 (define-public julia-json3
2546 (name "julia-json3")
2552 (url "https://github.com/quinnj/JSON3.jl")
2553 (commit (string-append "v" version))))
2554 (file-name (git-file-name name version))
2556 (base32 "11z5maz7v50wd99id8z7838higza0cllh2amkdkrlskbri3v2f17"))))
2557 (build-system julia-build-system)
2559 `(("julia-parsers" ,julia-parsers)
2560 ("julia-structtypes" ,julia-structtypes)))
2561 (home-page "https://github.com/quinnj/JSON3.jl")
2562 (synopsis "JSON package for Julia")
2563 (description "This package provides another JSON package for Julia, with a
2564 focus on speed and slick struct mapping.")
2565 (license license:expat)))
2567 (define-public julia-latexstrings
2569 (name "julia-latexstrings")
2575 (url "https://github.com/stevengj/LaTeXStrings.jl")
2576 (commit (string-append "v" version))))
2577 (file-name (git-file-name name version))
2579 (base32 "117z27krcf8fydgp6mb0pgn75r4gng9qs7v90qb4bqzsry3faadp"))))
2580 (build-system julia-build-system)
2582 `(("julia-documenter" ,julia-documenter)))
2583 (home-page "https://github.com/stevengj/LaTeXStrings.jl")
2584 (synopsis "Input and display of LaTeX equation strings")
2585 (description "This is a small package to make it easier to type LaTeX
2586 equations in string literals in the Julia language.")
2587 (license license:expat)))
2589 (define-public julia-lazyarrays
2591 (name "julia-lazyarrays")
2597 (url "https://github.com/JuliaArrays/LazyArrays.jl")
2598 (commit (string-append "v" version))))
2599 (file-name (git-file-name name version))
2601 (base32 "17rhlrmgfvdw8w62pg32ikr9j4xy2ylr7mx7ar0hnpzryv929rp5"))))
2602 (build-system julia-build-system)
2604 `(("julia-arraylayouts" ,julia-arraylayouts)
2605 ("julia-fillarrays" ,julia-fillarrays)
2606 ("julia-macrotools" ,julia-macrotools)
2607 ("julia-matrixfactorizations" ,julia-matrixfactorizations)
2608 ("julia-staticarrays" ,julia-staticarrays)))
2610 `(("julia-tracker" ,julia-tracker)))
2611 (home-page "https://github.com/JuliaArrays/LazyArrays.jl")
2612 (synopsis "Lazy arrays and linear algebra")
2613 (description "This package supports lazy analogues of array operations like
2614 @code{vcat}, @code{hcat}, and multiplication. This helps with the
2615 implementation of matrix-free methods for iterative solvers.")
2616 (license license:expat)))
2618 (define-public julia-logexpfunctions
2620 (name "julia-logexpfunctions")
2626 (url "https://github.com/JuliaStats/LogExpFunctions.jl")
2627 (commit (string-append "v" version))))
2628 (file-name (git-file-name name version))
2630 (base32 "0rvms3mmq8a1viqlyzdgs2ccddcy6j0c677dlb8m5nk6hkiwr16n"))))
2631 (build-system julia-build-system)
2633 `(("julia-docstringextensions" ,julia-docstringextensions)))
2635 `(("julia-offsetarrays" ,julia-offsetarrays)))
2636 (home-page "https://github.com/JuliaStats/LogExpFunctions.jl")
2637 (synopsis "Special functions based on @code{log} and @code{exp}")
2638 (description "Various special functions based on log and exp moved from
2639 @code{StatsFuns.jl} into a separate package, to minimize dependencies. These
2640 functions only use native Julia code, so there is no need to depend on
2641 @code{librmath} or similar libraries.")
2642 (license license:expat)))
2644 (define-public julia-macrotools
2646 (name "julia-macrotools")
2652 (url "https://github.com/FluxML/MacroTools.jl")
2653 (commit (string-append "v" version))))
2654 (file-name (git-file-name name version))
2656 (base32 "0k4z2hyasd9cwxf4l61zk3w4ajs44k69wx6z1ghdn8f5p8xy217f"))))
2657 (build-system julia-build-system)
2658 (home-page "https://fluxml.ai/MacroTools.jl")
2659 (synopsis "Tools for working with Julia code and expressions")
2660 (description "This library provides tools for working with Julia code and
2661 expressions. This includes a template-matching system and code-walking tools
2662 that let you do deep transformations of code.")
2663 (license license:expat)))
2665 (define-public julia-mappedarrays
2667 (name "julia-mappedarrays")
2673 (url "https://github.com/JuliaArrays/MappedArrays.jl")
2674 (commit (string-append "v" version))))
2675 (file-name (git-file-name name version))
2677 (base32 "0l5adird8m1cmnsxwhzi5hcr7q9bm1rf7a6018zc7kcn2yxdshy3"))))
2678 (build-system julia-build-system)
2680 `(("julia-fixedpointnumbers" ,julia-fixedpointnumbers)))
2682 `(("julia-colortypes" ,julia-colortypes)
2683 ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
2684 ("julia-offsetarrays" ,julia-offsetarrays)))
2685 (home-page "https://github.com/JuliaArrays/MappedArrays.jl")
2686 (synopsis "Lazy in-place transformations of arrays")
2687 (description "This package implements \"lazy\" in-place elementwise
2688 transformations of arrays for the Julia programming language. Explicitly, it
2689 provides a \"view\" M of an array A so that @code{M[i] = f(A[i])} for a
2690 specified (but arbitrary) function f, without ever having to compute M
2691 explicitly (in the sense of allocating storage for M). The name of the package
2692 comes from the fact that @code{M == map(f, A)}.")
2693 (license license:expat)))
2695 (define-public julia-matrixfactorizations
2697 (name "julia-matrixfactorizations")
2703 (url "https://github.com/JuliaMatrices/MatrixFactorizations.jl")
2704 (commit (string-append "v" version))))
2705 (file-name (git-file-name name version))
2707 (base32 "15zvcv2l4iqmjpnqjyx2kry7a85p652nbjy9pj3wq0piksqcz4jb"))))
2708 (build-system julia-build-system)
2711 (modify-phases %standard-phases
2712 (add-after 'unpack 'skip-failing-test
2714 ;; Tests with math functions are hard.
2715 (substitute* "test/test_ul.jl"
2716 (("@test @inferred\\(logdet") "@test @test_nowarn(logdet")
2717 ;; Also skip the REPL test.
2718 (("test String") "test_nowarn String"))
2721 `(("julia-arraylayouts" ,julia-arraylayouts)))
2722 (home-page "https://github.com/JuliaMatrices/MatrixFactorizations.jl")
2723 (synopsis "Julia package to contain non-standard matrix factorizations")
2724 (description "A Julia package to contain non-standard matrix factorizations.
2725 At the moment it implements the QL, RQ, and UL factorizations, a combined
2726 Cholesky factorization with inverse, and polar decompositions. In the future it
2727 may include other factorizations such as the LQ factorization.")
2728 (license license:expat)))
2730 (define-public julia-mbedtls
2732 (name "julia-mbedtls")
2738 (url "https://github.com/JuliaLang/MbedTLS.jl")
2739 (commit (string-append "v" version))))
2740 (file-name (git-file-name name version))
2742 (base32 "0zjzf2r57l24n3k0gcqkvx3izwn5827iv9ak0lqix0aa5967wvfb"))))
2743 (build-system julia-build-system)
2746 (modify-phases %standard-phases
2747 (add-before 'install 'disable-network-tests
2748 ;; Tries to connect to httpbin.org
2750 (substitute* "test/runtests.jl"
2751 (("testhost =") "return #"))
2753 (propagated-inputs `(("julia-mbedtls-jll" ,julia-mbedtls-jll)))
2754 (home-page "https://github.com/JuliaLang/MbedTLS.jl")
2755 (synopsis "Apache's mbed TLS library wrapper")
2756 (description "@code{MbedTLS.jl} provides a wrapper around the @code{mbed
2757 TLS} and cryptography C library for Julia.")
2758 (license license:expat)))
2760 (define-public julia-measurements
2762 (name "julia-measurements")
2768 (url "https://github.com/JuliaPhysics/Measurements.jl")
2769 (commit (string-append "v" version))))
2770 (file-name (git-file-name name version))
2772 (base32 "05p3f0gr4sv4maq8cix5fi8ldq0zagswqsd43xn6fhy046f936mz"))))
2773 (build-system julia-build-system)
2775 `(("julia-calculus" ,julia-calculus)
2776 ("julia-recipesbase" ,julia-recipesbase)
2777 ("julia-requires" ,julia-requires)))
2779 `(("julia-quadgk" ,julia-quadgk)
2780 ("julia-specialfunctions" ,julia-specialfunctions)
2781 ("julia-unitful" ,julia-unitful)))
2782 (home-page "https://juliaphysics.github.io/Measurements.jl/stable/")
2783 (synopsis "Error propagation calculator and library")
2784 (description "@code{Measurements.jl} is an error propagation calculator and
2785 library for physical measurements. It supports real and complex numbers with
2786 uncertainty, arbitrary precision calculations, operations with arrays, and
2787 numerical integration. The linear error propagation theory is employed to
2788 propagate the errors.")
2789 (license license:expat)))
2791 (define-public julia-measures
2793 (name "julia-measures")
2799 (url "https://github.com/JuliaGraphics/Measures.jl")
2800 (commit (string-append "v" version))))
2801 (file-name (git-file-name name version))
2803 (base32 "0j34psrdijnqqn9zv0r2sknr1p9q0mmbjvjhmjra37bb5fh2gk8l"))))
2804 (build-system julia-build-system)
2805 (home-page "https://github.com/JuliaGraphics/Measures.jl")
2806 (synopsis "Unified measure and coordinates types")
2807 (description "This library generalizes and unifies the notion of measures
2808 used in Compose, Compose3D, and Escher. It allows building up and representing
2809 expressions involving differing types of units that are then evaluated,
2810 resolving them into absolute units.")
2811 (license license:expat)))
2813 (define-public julia-missings
2815 (name "julia-missings")
2821 (url "https://github.com/JuliaData/Missings.jl")
2822 (commit (string-append "v" version))))
2823 (file-name (git-file-name name version))
2825 (base32 "1k481rm5lahmjyh34j177d4n10svgr0wm7ps5m3ar3xx6nr26ad5"))))
2826 (build-system julia-build-system)
2828 `(("julia-dataapi" ,julia-dataapi)))
2829 (home-page "https://github.com/JuliaData/Missings.jl")
2830 (synopsis "Additional missing value support for Julia")
2831 (description "This package provides additional functionality for working
2832 with @code{missing} values in Julia.")
2833 (license license:expat)))
2835 (define-public julia-mlstyle
2837 (name "julia-mlstyle")
2843 (url "https://github.com/thautwarm/MLStyle.jl")
2844 (commit (string-append "v" version))))
2845 (file-name (git-file-name name version))
2847 (base32 "0h1cd7cr4c4cnpqyj3180113gdbvcc047lqphp8a8gq5smp3c059"))))
2848 (build-system julia-build-system)
2850 `(("julia-datastructures" ,julia-datastructures)))
2851 (home-page "https://thautwarm.github.io/MLStyle.jl/latest/")
2852 (synopsis "Julia functional programming infrastructures")
2853 (description "This package provides consistent and extensible functional
2854 programming infrastructures, and metaprogramming facilities.")
2855 (license license:expat)))
2857 (define-public julia-mocking
2859 (name "julia-mocking")
2865 (url "https://github.com/invenia/Mocking.jl")
2866 (commit (string-append "v" version))))
2867 (file-name (git-file-name name version))
2869 (base32 "1cg2is83bjmrchmmxcgx57k8c9b9vlamrw38v4fdhbb6d4six5cg"))))
2870 (build-system julia-build-system)
2872 `(("julia-compat" ,julia-compat)
2873 ("julia-exprtools" ,julia-exprtools)))
2874 (home-page "https://github.com/invenia/Mocking.jl")
2875 (synopsis "Overload Julia function calls")
2876 (description "The purpose of this package is to allow Julia function calls
2877 to be temporarily overloaded for the purpose of testing.")
2878 (license license:expat)))
2880 (define-public julia-mosaicviews
2882 (name "julia-mosaicviews")
2888 (url "https://github.com/JuliaArrays/MosaicViews.jl")
2889 (commit (string-append "v" version))))
2890 (file-name (git-file-name name version))
2892 (base32 "04fgxghyb7n2ji76xkb1r1fjhzsdbgmp5wsfyyn3yjcsdqbyp8pz"))))
2893 (build-system julia-build-system)
2895 `(#:tests? #f)) ; Cycle with ImageCore.jl
2897 `(("julia-mappedarrays" ,julia-mappedarrays)
2898 ("julia-paddedviews" ,julia-paddedviews)
2899 ("julia-stackviews" ,julia-stackviews)))
2901 ; `(("julia-colorvectorspace" ,julia-colorvectorspace)
2902 ; ("julia-imagecore" ,julia-imagecore)))
2903 (home-page "https://github.com/JuliaArrays/MosaicViews.jl")
2905 "Lazily view a 3D or 4D array as an expanded 2D array as a matrix of slices")
2906 (description "When visualizing images, it is not uncommon to provide a 2D
2907 view of different image sources. For example, comparing multiple images of
2908 different sizes, getting a preview of machine learning dataset. This package
2909 aims to provide easy-to-use tools for such tasks.")
2910 (license license:expat)))
2912 (define-public julia-msgpack
2914 (name "julia-msgpack")
2920 (url "https://github.com/JuliaIO/MsgPack.jl")
2921 (commit (string-append "v" version))))
2922 (file-name (git-file-name name version))
2924 (base32 "1layiqjf9si38pfdcszppgcy4zbfqgld7jlw8x645sm9b17b19fg"))))
2925 (build-system julia-build-system)
2926 (home-page "https://github.com/JuliaIO/MsgPack.jl")
2927 (synopsis "Julia MsgPack implementation")
2928 (description "@code{MsgPack.jl} is a MessagePack implementation in pure
2929 Julia, with type-driven, overloadable packing/unpacking functionality.")
2930 (license license:expat)))
2932 (define-public julia-mutablearithmetics
2934 (name "julia-mutablearithmetics")
2940 (url "https://github.com/jump-dev/MutableArithmetics.jl")
2941 (commit (string-append "v" version))))
2942 (file-name (git-file-name name version))
2944 (base32 "1isyj8h4nx96cr6892d154v8pw1nhr7mjyz5bd6ffr2mkzb2bq4f"))))
2945 (build-system julia-build-system)
2947 `(("julia-offsetarrays" ,julia-offsetarrays)))
2948 (home-page "https://github.com/jump-dev/MutableArithmetics.jl")
2949 (synopsis "Interface for arithmetics on mutable types in Julia")
2950 (description "MutableArithmetics is a Julia package which allows:
2952 @item mutable types to implement mutable arithmetics
2953 @item algorithms that could exploit mutable arithmetics to exploit them while
2954 still being completely generic
2956 (license license:mpl2.0)))
2958 (define-public julia-nanmath
2960 (name "julia-nanmath")
2966 (url "https://github.com/mlubin/NaNMath.jl")
2967 (commit (string-append "v" version))))
2968 (file-name (git-file-name name version))
2970 (base32 "1hczhz00qj99w63vp627kwk02l2sr2qmzc2rkwwkdwvzy670p25q"))))
2971 (build-system julia-build-system)
2972 (home-page "https://github.com/mlubin/NaNMath.jl")
2973 (synopsis "Implementations of basic math functions")
2974 (description "Implementations of basic math functions which return
2975 @code{NaN} instead of throwing a @code{DomainError}.")
2976 (license license:expat)))
2978 (define-public julia-nlsolversbase
2980 (name "julia-nlsolversbase")
2986 (url "https://github.com/JuliaNLSolvers/NLSolversBase.jl")
2987 (commit (string-append "v" version))))
2988 (file-name (git-file-name name version))
2990 (base32 "0n8qh5a2ghjx1j70zxn0hmh8gzpa46kmjg8di879y9974bfk0f98"))))
2991 (build-system julia-build-system)
2993 `(("julia-diffresults" ,julia-diffresults)
2994 ("julia-finitediff" ,julia-finitediff)
2995 ("julia-forwarddiff" ,julia-forwarddiff)))
2997 `(("julia-optimtestproblems" ,julia-optimtestproblems)
2998 ("julia-recursivearraytools" ,julia-recursivearraytools)))
2999 (home-page "https://github.com/JuliaNLSolvers/NLSolversBase.jl")
3000 (synopsis "Optimization and equation solver software in JuliaNLSolvers")
3001 (description "This package aims at establishing common ground for Optim.jl,
3002 LineSearches.jl, and NLsolve.jl. The common ground is mainly the types used to
3003 hold objective related callables, information about the objectives, and an
3004 interface to interact with these types.")
3005 (license license:expat)))
3007 (define-public julia-nnlib
3009 (name "julia-nnlib")
3015 (url "https://github.com/FluxML/NNlib.jl")
3016 (commit (string-append "v" version))))
3017 (file-name (git-file-name name version))
3019 (base32 "16vn5w5274kcywh1xp0zqjk5q10xrk125aznz5av6wifwrvghk8s"))))
3020 (build-system julia-build-system)
3023 (modify-phases %standard-phases
3024 (add-after 'unpack 'skip-cuda-tests
3026 (substitute* "test/runtests.jl"
3028 (("&& CUDA\\.functional\\(\\)") ""))
3029 (setenv "NNLIB_TEST_CUDA" "false"))))))
3031 `(("julia-adapt" ,julia-adapt)
3032 ("julia-chainrulescore" ,julia-chainrulescore)
3033 ("julia-requires" ,julia-requires)))
3035 `(("julia-chainrulestestutils" ,julia-chainrulestestutils)
3036 ("julia-stablerngs" ,julia-stablerngs)
3037 ("julia-zygote" ,julia-zygote)))
3038 (home-page "https://github.com/FluxML/NNlib.jl")
3039 (synopsis "Neural Network primitives with multiple backends")
3040 (description "This package will provide a library of functions useful for
3041 machine learning, such as softmax, sigmoid, convolutions and pooling. It
3042 doesn't provide any other \"high-level\" functionality like layers or AD.")
3043 (license license:expat)))
3045 (define-public julia-optimtestproblems
3047 (name "julia-optimtestproblems")
3053 (url "https://github.com/JuliaNLSolvers/OptimTestProblems.jl")
3054 (commit (string-append "v" version))))
3055 (file-name (git-file-name name version))
3057 (base32 "10h47x5ws42pkqjccimaz0yxfvz41w0yazq6inamfk4lg5g2g3d9"))))
3058 (build-system julia-build-system)
3060 `(#:julia-package-name "OptimTestProblems"))
3061 (home-page "https://github.com/JuliaNLSolvers/OptimTestProblems.jl")
3062 (synopsis "Collection of optimization test problems")
3063 (description "The purpose of this package is to provide test problems for
3064 JuliaNLSolvers packages.")
3065 (license license:expat)))
3067 (define-public julia-orderedcollections
3069 (name "julia-orderedcollections")
3075 (url "https://github.com/JuliaCollections/OrderedCollections.jl")
3076 (commit (string-append "v" version))))
3077 (file-name (git-file-name name version))
3079 (base32 "0jaxcmvkp8zpqrz101yikdigz90s70i7in5wn8kybwzf0na3lhwf"))))
3080 (build-system julia-build-system)
3081 (home-page "https://github.com/JuliaCollections/OrderedCollections.jl")
3082 (synopsis "Associative containers that preserve insertion order")
3083 (description "This package implements @code{OrderedDicts} and
3084 @code{OrderedSets}, which are similar to containers in base Julia. However,
3085 during iteration the @code{Ordered*} containers return items in the order in
3086 which they were added to the collection.")
3087 (license license:expat)))
3089 (define-public julia-offsetarrays
3091 (name "julia-offsetarrays")
3097 (url "https://github.com/JuliaArrays/OffsetArrays.jl")
3098 (commit (string-append "v" version))))
3099 (file-name (git-file-name name version))
3101 (base32 "0j5a8ar8yc0j9h87gwfyrcqm23wpyv5yv5gn8vzilpg4vr0fiasc"))))
3102 (build-system julia-build-system)
3104 `(("julia-adapt" ,julia-adapt)))
3105 ;; CatIndices depends on OffsetArrays, introducing a recursive dependency
3106 (arguments '(#:tests? #f))
3107 (home-page "https://juliaarrays.github.io/OffsetArrays.jl/stable/")
3108 (synopsis "Fortran-like arrays with arbitrary, zero or negative indices")
3109 (description "@code{OffsetArrays.jl} provides Julia users with arrays that
3110 have arbitrary indices, similar to those found in some other programming
3111 languages like Fortran.")
3112 (license license:expat)))
3114 (define-public julia-paddedviews
3116 (name "julia-paddedviews")
3122 (url "https://github.com/JuliaArrays/PaddedViews.jl")
3123 (commit (string-append "v" version))))
3124 (file-name (git-file-name name version))
3126 (base32 "0ran2vj6ahlzib0g77y7g0jhavy3k9s2mqq23ybpgp9z677wf26h"))))
3127 (build-system julia-build-system)
3129 '(#:tests? #f)) ;require Documenter, not packaged yet
3131 `(("julia-offsetarrays" ,julia-offsetarrays)))
3132 (home-page "https://github.com/JuliaArrays/PaddedViews.jl")
3133 (synopsis "Add virtual padding to the edges of an array")
3134 (description "@code{PaddedViews} provides a simple wrapper type,
3135 @code{PaddedView}, to add \"virtual\" padding to any array without copying data.
3136 Edge values not specified by the array are assigned a @code{fillvalue}.
3137 Multiple arrays may be \"promoted\" to have common indices using the
3138 @code{paddedviews} function.")
3139 (license license:expat)))
3141 (define-public julia-parameters
3143 (name "julia-parameters")
3149 (url "https://github.com/mauro3/Parameters.jl")
3150 (commit (string-append "v" version))))
3151 (file-name (git-file-name name version))
3153 (base32 "0b8lawi7kcws4axfsdf023gyxca15irl648ciyi1kw3wghz3pfi2"))))
3154 (build-system julia-build-system)
3156 `(("julia-orderedcollections" ,julia-orderedcollections)
3157 ("julia-unpack" ,julia-unpack)))
3158 (home-page "https://github.com/mauro3/Parameters.jl")
3159 (synopsis "Numerical-model parameter helpers")
3160 (description "This package contains types with default field values, keyword
3161 constructors and (un-)pack macros. Keyword functions can be slow in Julia,
3162 however, the normal positional constructor is also provided and could be used in
3163 performance critical code.")
3164 (license license:expat)))
3166 (define-public julia-parsers
3168 (name "julia-parsers")
3174 (url "https://github.com/JuliaData/Parsers.jl")
3175 (commit (string-append "v" version))))
3176 (file-name (git-file-name name version))
3178 (base32 "1gz3drd5334xrbx2ms33hiifkd0q1in4ywc92xvrkq3xgzdjqjdk"))))
3179 (build-system julia-build-system)
3180 (home-page "https://github.com/JuliaData/Parsers.jl")
3181 (synopsis "Fast parsing machinery for basic types in Julia")
3182 (description "@code{Parsers.jl} is a collection of type parsers and
3183 utilities for Julia.")
3184 (license license:expat)))
3186 (define-public julia-pdmats
3188 (name "julia-pdmats")
3194 (url "https://github.com/JuliaStats/PDMats.jl")
3195 (commit (string-append "v" version))))
3196 (file-name (git-file-name name version))
3198 (base32 "0bc2gmpd30rkclvxyfnssjllp0pk63h0vvgr8862phm5ia83r8j0"))))
3199 (build-system julia-build-system)
3200 (home-page "https://github.com/JuliaStats/PDMats.jl")
3202 "Uniform Interface for positive definite matrices of various structures")
3203 (description "PDMats.jl supports efficient computation on positive definite
3204 matrices of various structures. In particular, it provides uniform interfaces
3205 to use positive definite matrices of various structures for writing generic
3206 algorithms, while ensuring that the most efficient implementation is used in
3207 actual computation.")
3208 (license license:expat)))
3210 (define-public julia-plotthemes
3212 (name "julia-plotthemes")
3218 (url "https://github.com/JuliaPlots/PlotThemes.jl")
3219 (commit (string-append "v" version))))
3220 (file-name (git-file-name name version))
3222 (base32 "1fd27w9z1vhz0d1bzrs5vcavpb5r5jviyh27d9c4ka37phz4xvmh"))))
3223 (build-system julia-build-system)
3225 `(("julia-plotutils" ,julia-plotutils)
3226 ("julia-requires" ,julia-requires)))
3227 (home-page "https://github.com/JuliaPlots/PlotThemes.jl")
3228 (synopsis "Themes for the Julia plotting package Plots.jl")
3230 "PlotThemes is a package to spice up the plots made with @code{Plots.jl}.")
3231 (license license:expat)))
3233 (define-public julia-plotutils
3235 (name "julia-plotutils")
3241 (url "https://github.com/JuliaPlots/PlotUtils.jl")
3242 (commit (string-append "v" version))))
3243 (file-name (git-file-name name version))
3245 (base32 "12aw5gkkcfhpczv2w510k65w1j0hjnh825ihimi223v8plsi5105"))))
3246 (build-system julia-build-system)
3248 `(("julia-colors" ,julia-colors)
3249 ("julia-colorschemes" ,julia-colorschemes)
3250 ("julia-reexport" ,julia-reexport)))
3252 `(("julia-stablerngs" ,julia-stablerngs)))
3253 (home-page "https://github.com/JuliaPlots/PlotUtils.jl")
3254 (synopsis "Helper algorithms for building plotting components")
3255 (description "This package contains generic helper algorithms for building
3256 plotting components.")
3257 (license license:expat)))
3259 (define-public julia-pooledarrays
3261 (name "julia-pooledarrays")
3267 (url "https://github.com/JuliaData/PooledArrays.jl")
3268 (commit (string-append "v" version))))
3269 (file-name (git-file-name name version))
3271 (base32 "0qdwvf1p5z6z0q4s4hn85ysd8wq47zy6hlzddc5ijvhk86ccqlrr"))))
3272 (build-system julia-build-system)
3274 `(("julia-dataapi" ,julia-dataapi)))
3275 (home-page "https://github.com/JuliaData/PooledArrays.jl")
3276 (synopsis "Pooled representation of arrays in Julia")
3277 (description "This package provides a pooled representation of arrays for
3278 purposes of compression when there are few unique elements.")
3279 (license license:expat)))
3281 (define-public julia-positivefactorizations
3283 (name "julia-positivefactorizations")
3289 (url "https://github.com/timholy/PositiveFactorizations.jl")
3290 (commit (string-append "v" version))))
3291 (file-name (git-file-name name version))
3293 (base32 "1wxy6ak7f3hvibcgc8q88cgkf9zvi649mmjy1zlkx1qk80hgvz23"))))
3294 (build-system julia-build-system)
3296 `(("julia-forwarddiff" ,julia-forwarddiff)
3297 ("julia-reversediff" ,julia-reversediff)))
3298 (home-page "https://github.com/timholy/PositiveFactorizations.jl")
3299 (synopsis "Positive-definite \"approximations\" to matrices")
3300 (description "@code{PositiveFactorizations} is a package for computing a
3301 positive definite matrix decomposition (factorization) from an arbitrary
3302 symmetric input. The motivating application is optimization (Newton or
3303 quasi-Newton methods), in which the canonical search direction -H/g (H being the
3304 Hessian and g the gradient) may not be a descent direction if H is not positive
3306 (license license:expat)))
3308 (define-public julia-preferences
3310 (name "julia-preferences")
3316 (url "https://github.com/JuliaPackaging/Preferences.jl")
3317 (commit (string-append "v" version))))
3318 (file-name (git-file-name name version))
3320 (base32 "1cail43iqzbi6m9v6981rhz47zf2lcvhs5ds5gdqvc9nx5frghxq"))))
3321 (build-system julia-build-system)
3323 `(#:tests? #f)) ; Tests try to mkdir /.julia
3324 (home-page "https://github.com/JuliaPackaging/Preferences.jl")
3325 (synopsis "Store configuration switches to TOML files")
3326 (description "The @code{Preferences} package provides an integrated way for
3327 packages to store configuration switches to persistent TOML files, and use those
3328 pieces of information at both run time and compile time in Julia. This enables
3329 the user to modify the behavior of a package, and have that choice reflected in
3330 everything from run time algorithm choice to code generation at compile time.")
3331 (license license:expat)))
3333 (define-public julia-prettytables
3335 (name "julia-prettytables")
3341 (url "https://github.com/ronisbr/PrettyTables.jl")
3342 (commit (string-append "v" version))))
3343 (file-name (git-file-name name version))
3345 (base32 "1d1sd87kkwbar3l608h0adzws42cwdrmp1idxx7an6mfqcsdrijw"))))
3346 (build-system julia-build-system)
3349 (modify-phases %standard-phases
3350 (add-after 'unpack 'skip-color-tests
3352 (substitute* "test/text_backend.jl"
3353 ((".*colors\\.jl.*") ""))
3356 `(("julia-crayons" ,julia-crayons)
3357 ("julia-formatting" ,julia-formatting)
3358 ("julia-reexport" ,julia-reexport)
3359 ("julia-tables" ,julia-tables)))
3360 (home-page "https://github.com/ronisbr/PrettyTables.jl")
3361 (synopsis "Print data in formatted tables")
3362 (description "This package has the purpose to print data in matrices in a
3363 human-readable format.")
3364 (license license:expat)))
3366 (define-public julia-pycall
3368 (name "julia-pycall")
3374 (url "https://github.com/JuliaPy/PyCall.jl")
3375 (commit (string-append "v" version))))
3376 (file-name (git-file-name name version))
3379 "07r99ni6nkxpyrp3wsb5qg4jxz7i2r08dyqbiffy2zm3g0bn88jq"))))
3380 (build-system julia-build-system)
3382 `(#:imported-modules ((guix build python-build-system)
3383 ,@%julia-build-system-modules)
3384 #:modules ((guix build julia-build-system)
3386 ((guix build python-build-system) #:prefix python:))
3388 (modify-phases %standard-phases
3389 (add-after 'unpack 'remove-conda
3391 (substitute* "Project.toml"
3393 (substitute* (list "src/PyCall.jl"
3395 (("import Conda") ""))
3396 (substitute* "deps/depsutils.jl"
3397 (("Conda.PYTHONDIR") "\"/\""))
3399 (add-after 'unpack 'set-python
3400 (lambda* (#:key inputs outputs #:allow-other-keys)
3401 (let ((python (assoc-ref inputs "python")))
3402 (setenv "PYCALL_JL_RUNTIME_PYTHON"
3403 (string-append python "/bin/python3"))
3404 (with-output-to-file "deps/deps.jl"
3407 "const python = \"~a/bin/python3\"~@
3408 const pyprogramname = \"~a/bin/python3\"~@
3409 const libpython = \"~a/lib/libpython~a.so.1.0\"~@
3410 const PYTHONHOME = \"~a\"~@
3411 const pyversion_build = v\"~a\"~@
3412 const conda = false~%"
3416 (python:python-version python)
3418 ,(package-version python))))
3420 (add-before 'check 'pre-check
3422 (setenv "CI" "true")
3423 (setenv "JULIA_PKGEVAL" "true")
3426 `(("julia-macrotools" ,julia-macrotools)
3427 ("julia-versionparsing" ,julia-versionparsing)))
3429 `(("python" ,python)))
3431 `(("python-numpy" ,python-numpy)))
3432 (home-page "https://github.com/JuliaPy/PyCall.jl")
3433 (synopsis "Call Python functions from the Julia language")
3434 (description "This package provides the ability to directly call and fully
3435 interoperate with Python from the Julia language. You can import arbitrary
3436 Python modules from Julia, call Python functions (with automatic conversion of
3437 types between Julia and Python), define Python classes from Julia methods, and
3438 share large data structures between Julia and Python without copying them.")
3439 (license license:expat)))
3441 (define-public julia-pyplot
3443 (name "julia-pyplot")
3449 (url "https://github.com/JuliaPy/PyPlot.jl")
3450 (commit (string-append "v" version))))
3451 (file-name (git-file-name name version))
3453 (base32 "007zs0imfgs69f30pp2a3rc93kl0qiq7qjx6ig35z4wzkmps4skd"))))
3454 (build-system julia-build-system)
3456 `(("julia-colors" ,julia-colors)
3457 ("julia-latexstrings" ,julia-latexstrings)
3458 ("julia-pycall" ,julia-pycall)
3459 ("julia-versionparsing" ,julia-versionparsing)
3460 ;; python-matplotlib is expected to be available at runtime.
3461 ("python-matplotlib" ,python-matplotlib)))
3462 (home-page "https://github.com/JuliaPy/PyPlot.jl")
3463 (synopsis "Plotting for Julia based on matplotlib.pyplot")
3464 (description "This package provides a Julia interface to the Matplotlib
3465 plotting library from Python, and specifically to the @code{matplotlib.pyplot}
3466 module. PyPlot uses the Julia PyCall package to call Matplotlib directly from
3467 Julia with little or no overhead (arrays are passed without making a copy).")
3468 (license license:expat)))
3470 (define-public julia-quadgk
3472 (name "julia-quadgk")
3478 (url "https://github.com/JuliaMath/QuadGK.jl")
3479 (commit (string-append "v" version))))
3480 (file-name (git-file-name name version))
3482 (base32 "1hy0629yai6xflgxaflk9764lzr1lzhlghimxk1aqi212q9c6n33"))))
3483 (build-system julia-build-system)
3485 `(("julia-datastructures" ,julia-datastructures)))
3486 (home-page "https://github.com/JuliaMath/QuadGK.jl")
3487 (synopsis "Adaptive 1d numerical Gauss–Kronrod integration")
3488 (description "This package provides support for one-dimensional numerical
3489 integration in Julia using adaptive Gauss-Kronrod quadrature. The code was
3490 originally part of Base Julia. It supports integration of arbitrary numeric
3491 types, including arbitrary precision (@code{BigFloat}), and even integration of
3492 arbitrary normed vector spaces (e.g. matrix-valued integrands).")
3493 (license license:expat)))
3495 (define-public julia-quadmath
3497 (name "julia-quadmath")
3503 (url "https://github.com/JuliaMath/Quadmath.jl")
3504 (commit (string-append "v" version))))
3505 (file-name (git-file-name name version))
3507 (base32 "051biw4b9zni7cmh2f1yzifp1v8wazlfxrdz4p44lyd1wba6379w"))))
3508 (build-system julia-build-system)
3511 (modify-phases %standard-phases
3512 (add-after 'unpack 'hardcode-libmath-location
3513 (lambda* (#:key inputs #:allow-other-keys)
3514 (let ((gcclib (assoc-ref inputs "gcc:lib")))
3515 (substitute* "src/Quadmath.jl"
3516 (("libgcc_s.so.1" lib) (string-append gcclib "/lib/" lib))
3517 (("libquadmath.so.0" lib) (string-append gcclib "/lib/" lib)))
3520 `(("julia-requires" ,julia-requires)))
3522 `(("gcc:lib" ,gcc "lib")))
3524 `(("julia-specialfunctions" ,julia-specialfunctions)))
3525 (home-page "https://github.com/JuliaMath/Quadmath.jl")
3526 (synopsis "Float128 and libquadmath for the Julia language")
3527 (description "This is a Julia interface to @code{libquadmath}, providing a
3528 @code{Float128} type corresponding to the IEEE754 binary128 floating point
3530 (license license:expat)))
3532 (define-public julia-quaternions
3534 (name "julia-quaternions")
3540 (url "https://github.com/JuliaGeometry/Quaternions.jl")
3541 (commit (string-append "v" version))))
3542 (file-name (git-file-name name version))
3544 (base32 "1zhynyvchc50hywws2jznpkwydr3njh8cv84d2ylyabhcwwmil9s"))))
3545 (build-system julia-build-system)
3547 `(("julia-dualnumbers" ,julia-dualnumbers)))
3548 (home-page "https://github.com/JuliaGeometry/Quaternions.jl")
3549 (synopsis "Quaternion and dual-quaternion functionality")
3550 (description "Quaternions are best known for their suitability as
3551 representations of 3D rotational orientation. They can also be viewed as an
3552 extension of complex numbers.")
3553 (license license:expat)))
3555 (define-public julia-queryoperators
3557 (name "julia-queryoperators")
3563 (url "https://github.com/queryverse/QueryOperators.jl")
3564 (commit (string-append "v" version))))
3565 (file-name (git-file-name name version))
3567 (base32 "06zm4cbn3x49lbpgshhdfvvmgz066qkc8q0d57igm5p8bcp6js22"))))
3568 (build-system julia-build-system)
3570 `(("julia-datastructures" ,julia-datastructures)
3571 ("julia-iteratorinterfaceextensions" ,julia-iteratorinterfaceextensions)
3572 ("julia-tableshowutils" ,julia-tableshowutils)))
3573 (home-page "https://github.com/queryverse/QueryOperators.jl")
3574 (synopsis "Query operators for Julia")
3575 (description "This package contains the underlying query operators that are
3576 exposed to users in @code{Query.jl}.")
3577 (license license:expat)))
3579 (define-public julia-rangearrays
3581 (name "julia-rangearrays")
3587 (url "https://github.com/JuliaArrays/RangeArrays.jl")
3588 (commit (string-append "v" version))))
3589 (file-name (git-file-name name version))
3591 (base32 "1ihzfyfq1xihkjcvn7xmzfbn6igzidb4fkzdcxwfr5qkvi52gnmg"))))
3592 (build-system julia-build-system)
3593 (home-page "https://github.com/JuliaArrays/RangeArrays.jl")
3594 (synopsis "Array data structures with autogenerated columns")
3595 (description "The goal of RangeArrays is to provide efficient and convenient
3596 array data structures where the columns of the arrays are generated (on the fly)
3598 (license license:expat)))
3600 (define-public julia-ratios
3602 (name "julia-ratios")
3608 (url "https://github.com/timholy/Ratios.jl")
3609 (commit (string-append "v" version))))
3610 (file-name (git-file-name name version))
3612 (base32 "1a4fd4jq4qjply29rkwg3m1clfndjsbckj1b1dab1bc35h2c6yxh"))))
3613 (build-system julia-build-system)
3614 (home-page "https://github.com/timholy/Ratios.jl")
3615 (synopsis "Faster Rational-like types for Julia")
3616 (description "This package provides types similar to Julia's @code{Rational}
3617 type, which make some sacrifices but have better computational performance.")
3618 (license license:expat)))
3620 (define-public julia-recipesbase
3622 (name "julia-recipesbase")
3628 (url "https://github.com/JuliaPlots/RecipesBase.jl")
3629 (commit (string-append "v" version))))
3630 (file-name (git-file-name name version))
3632 (base32 "1b6m5rz6wprj30rwvlxz4r1jv5gl0ay0f52kfmy2w7lqly7zhap5"))))
3633 (build-system julia-build-system)
3634 (home-page "https://github.com/JuliaPlots/RecipesBase.jl")
3635 (synopsis "Define transformation recipes on user types")
3636 (description "This package implements handy macros @code{@@recipe} and
3637 @code{@@series} which will define a custom transformation and attach attributes
3638 for user types. Its design is an attempt to simplify and generalize the summary
3639 and display of types and data from external packages. With this package it is
3640 possible to describe visualization routines that can be used as components in
3641 more complex visualizations.")
3642 (license license:expat)))
3644 (define-public julia-recipespipeline
3646 (name "julia-recipespipeline")
3652 (url "https://github.com/JuliaPlots/RecipesPipeline.jl")
3653 (commit (string-append "v" version))))
3654 (file-name (git-file-name name version))
3656 (base32 "0zq4bzxvq36zr0va6iip3x97mgq5b4fwza8avszx1ryfqm3lg1f7"))))
3657 (build-system julia-build-system)
3659 `(#:tests? #f)) ; Cycle with Plots.jl.
3661 `(("julia-nanmath" ,julia-nanmath)
3662 ("julia-plotutils" ,julia-plotutils)
3663 ("julia-recipesbase" ,julia-recipesbase)))
3664 (home-page "http://juliaplots.org/RecipesPipeline.jl/dev/")
3665 (synopsis "Utilities for processing recipes")
3666 (description "This package was factored out of @code{Plots.jl} to allow any
3667 other plotting package to use the recipe pipeline. In short, the extremely
3668 lightweight @code{RecipesBase.jl} package can be depended on by any package to
3669 define \"recipes\": plot specifications of user-defined types, as well as custom
3670 plot types. @code{RecipePipeline.jl} contains the machinery to translate these
3671 recipes to full specifications for a plot.")
3672 (license license:expat)))
3674 (define-public julia-recursivearraytools
3676 (name "julia-recursivearraytools")
3682 (url "https://github.com/SciML/RecursiveArrayTools.jl")
3683 (commit (string-append "v" version))))
3684 (file-name (git-file-name name version))
3686 (base32 "0vx8ndxrii53na7jsc2lki47wfpi77rn3y2r6xhiysx1qwr14msf"))))
3687 (build-system julia-build-system)
3689 `(#:tests? #f)) ; Cycle with OrdinaryDiffEq.jl.
3691 `(("julia-arrayinterface" ,julia-arrayinterface)
3692 ("julia-chainrulescore" ,julia-chainrulescore)
3693 ("julia-docstringextensions" ,julia-docstringextensions)
3694 ("julia-recipesbase" ,julia-recipesbase)
3695 ("julia-requires" ,julia-requires)
3696 ("julia-staticarrays" ,julia-staticarrays)
3697 ("julia-zygoterules" ,julia-zygoterules)))
3699 ; `(("julia-forwarddiff" ,julia-forwarddiff)
3700 ; ("julia-nlsolve" ,julia-nlsolve)
3701 ; ("julia-ordinarydiffeq" ,julia-ordinarydiffeq)
3702 ; ("julia-structarrays" ,julia-structarrays)
3703 ; ("julia-zygote" ,julia-zygote)))
3704 (home-page "https://github.com/SciML/RecursiveArrayTools.jl")
3705 (synopsis "Tools for handling objects like arrays of arrays and deeper nestings")
3706 (description "@code{RecursiveArrayTools.jl} is a set of tools for dealing with
3707 recursive arrays like arrays of arrays.")
3708 (license license:expat)))
3710 (define-public julia-reexport
3712 (name "julia-reexport")
3718 (url "https://github.com/simonster/Reexport.jl")
3719 (commit (string-append "v" version))))
3720 (file-name (git-file-name name version))
3722 (base32 "0inf5q6f01ncd5c5wm8mwzv2hs627ng6xlh8dhrlflp321hbamwf"))))
3723 (build-system julia-build-system)
3724 (home-page "https://github.com/simonster/Reexport.jl")
3725 (synopsis "Re-export modules and symbols")
3726 (description "This package provides tools to re-export modules and symbols.")
3727 (license license:expat)))
3729 (define-public julia-referencetests
3731 (name "julia-referencetests")
3737 (url "https://github.com/JuliaTesting/ReferenceTests.jl")
3738 (commit (string-append "v" version))))
3739 (file-name (git-file-name name version))
3741 (base32 "0mm6bjhs8a21pippww6b08b5frmnb9m6k8xrszrwq9zhc879zpc9"))))
3742 (build-system julia-build-system)
3744 `(#:tests? #f)) ; Cycle with ImageCore.jl through ImageMagick.jl.
3746 `(("julia-deepdiffs" ,julia-deepdiffs)
3747 ("julia-distances" ,julia-distances)
3748 ("julia-fileio" ,julia-fileio)
3749 ("julia-imagecore" ,julia-imagecore)
3750 ("julia-imageinterminal" ,julia-imageinterminal)))
3752 ; `(("julia-csvfiles" ,julia-csvfiles)
3753 ; ("julia-dataframes" ,julia-dataframes)
3754 ; ("julia-gr" ,julia-gr)
3755 ; ("julia-imagemagick" ,julia-imagemagick)
3756 ; ("julia-imagetransformations" ,julia-imagetransformations)
3757 ; ("julia-plots" ,julia-plots)
3758 ; ("julia-testimages" ,julia-testimages)))
3759 (home-page "https://juliatesting.github.io/ReferenceTests.jl/latest/")
3760 (synopsis "Utility package for comparing data against reference files")
3761 (description "@code{ReferenceTests.jl} is a Julia package that adds a couple
3762 of additional macros to your testing toolbox. In particular, it focuses on
3763 functionality for testing values against reference files, which in turn the
3764 package can help create and update if need be.")
3765 (license license:expat)))
3767 (define-public julia-requires
3769 (name "julia-requires")
3775 (url "https://github.com/JuliaPackaging/Requires.jl/")
3776 (commit (string-append "v" version))))
3777 (file-name (git-file-name name version))
3779 (base32 "03hyfy7c0ma45b0y756j76awi3az2ii4bz4s8cxm3xw9yy1z7b01"))))
3780 (build-system julia-build-system)
3781 (inputs ;required for test
3782 `(("julia-example" ,julia-example)))
3784 `(("julia-colors" ,julia-colors)))
3785 (home-page "https://github.com/JuliaPackaging/Requires.jl/")
3786 (synopsis "Faster package loader")
3787 (description "This package make loading packages faster, maybe. It
3788 supports specifying glue code in packages which will load automatically when
3789 another package is loaded, so that explicit dependencies (and long load times)
3791 (license license:expat)))
3793 (define-public julia-reversediff
3795 (name "julia-reversediff")
3801 (url "https://github.com/JuliaDiff/ReverseDiff.jl")
3802 (commit (string-append "v" version))))
3803 (file-name (git-file-name name version))
3805 (base32 "1wrr6sqj2xl9grkvdp88rw3manxy9vbx28zq2wssya5ns1xabsnl"))))
3806 (build-system julia-build-system)
3808 `(("julia-diffresults" ,julia-diffresults)
3809 ("julia-diffrules" ,julia-diffrules)
3810 ("julia-forwarddiff" ,julia-forwarddiff)
3811 ("julia-functionwrappers" ,julia-functionwrappers)
3812 ("julia-macrotools" ,julia-macrotools)
3813 ("julia-nanmath" ,julia-nanmath)
3814 ("julia-specialfunctions" ,julia-specialfunctions)
3815 ("julia-staticarrays" ,julia-staticarrays)))
3817 `(("julia-difftests" ,julia-difftests)
3818 ("julia-fillarrays" ,julia-fillarrays)))
3819 (home-page "https://github.com/JuliaDiff/ReverseDiff.jl")
3820 (synopsis "Reverse Mode Automatic Differentiation for Julia")
3821 (description "@code{ReverseDiff.jl} is a fast and compile-able tape-based
3822 reverse mode @acronym{AD, automatic differentiation}, that implements methods to
3823 take gradients, Jacobians, Hessians, and higher-order derivatives of native
3824 Julia functions (or any callable object, really).")
3825 (license license:expat)))
3827 (define-public julia-richardson
3829 (name "julia-richardson")
3835 (url "https://github.com/JuliaMath/Richardson.jl")
3836 (commit (string-append "v" version))))
3837 (file-name (git-file-name name version))
3839 (base32 "06v9ii3d7hh41fsrfklaa8ap55z5s017f888mrd1c18y4fx9i4nx"))))
3840 (build-system julia-build-system)
3841 (home-page "https://juliapackages.com/p/richardson")
3842 (synopsis "Extrapolate function using Richardson method")
3843 (description "This package provides a function extrapolate that
3844 extrapolates a given function @code{f(x)} to @code{f(x0)}, evaluating @code{f}
3845 only at a geometric sequence of points @code{> x0} (or optionally @code{<
3846 x0}). The key algorithm is Richardson extrapolation using a Neville–Aitken
3847 tableau, which adaptively increases the degree of an extrapolation polynomial
3848 until convergence is achieved to a desired tolerance (or convergence stalls
3849 due to e.g. floating-point errors). This allows one to obtain @code{f(x0)} to
3850 high-order accuracy, assuming that @code{f(x0+h)} has a Taylor series or some
3851 other power series in @code{h}.")
3852 (license license:expat)))
3854 (define-public julia-rotations
3855 ;; This is the first commit with support for julia-1.6.
3856 (let ((commit "b599102535bc3534252c76f3fd4cf521f4741788")
3859 (name "julia-rotations")
3860 (version (git-version "1.0.2" revision commit))
3865 (url "https://github.com/JuliaGeometry/Rotations.jl")
3867 (file-name (git-file-name name version))
3869 (base32 "01wwqbdmj61yiz7rkmams4xg7gb9hbmg325173846ky4b9x1wb19"))))
3870 (build-system julia-build-system)
3872 `(("julia-staticarrays" ,julia-staticarrays)))
3874 `(("julia-benchmarktools" ,julia-benchmarktools)
3875 ("julia-forwarddiff" ,julia-forwarddiff)
3876 ("julia-unitful" ,julia-unitful)))
3877 (home-page "https://github.com/JuliaGeometry/Rotations.jl")
3878 (synopsis "Julia implementations for different rotation parameterisations")
3879 (description "This package implements various 3D rotation parameterizations
3880 and defines conversions between them. At their heart, each rotation
3881 parameterization is a 3×3 unitary (orthogonal) matrix (based on the
3882 @code{StaticArrays.jl} package), and acts to rotate a 3-vector about the origin
3883 through matrix-vector multiplication.")
3884 (license license:expat))))
3886 (define-public julia-safetestsets
3887 ;; The only release tag is the first commit in the repository.
3888 (let ((commit "e553edc4c753344d38349304b9ff5483c3b8ff21")
3891 (name "julia-safetestsets")
3892 (version (git-version "0.0.1" revision commit))
3897 (url "https://github.com/YingboMa/SafeTestsets.jl")
3899 (file-name (git-file-name name version))
3901 (base32 "1fb1dfdmiw2ggx60hf70954xlps0r48fcb3k3dvxynlz7ylphp96"))))
3902 (build-system julia-build-system)
3904 `(#:julia-package-name "SafeTestsets"))
3906 `(("julia-staticarrays" ,julia-staticarrays)))
3907 (home-page "https://github.com/YingboMa/SafeTestsets.jl")
3908 (synopsis "Julia's testset in a module")
3909 (description "This package contains the testset from Julia, packaged into
3910 a loadable module.")
3911 (license license:expat))))
3913 (define-public julia-sass
3921 (url "https://github.com/piever/Sass.jl")
3922 (commit (string-append "v" version))))
3923 (file-name (git-file-name name version))
3925 (base32 "0y7kkkj717h5cj659ssry89i5r64symr6pvhr6vv4qmaxrnjxj92"))))
3926 (build-system julia-build-system)
3928 `(("julia-libsass-jll" ,julia-libsass-jll)))
3929 (home-page "https://github.com/piever/Sass.jl")
3930 (synopsis "Compile scss and sass file to css")
3931 (description "This package provides a simple Julian API to use the
3932 @code{libsass} library to compile scss and sass files to css.")
3933 (license license:expat)))
3935 (define-public julia-scratch
3937 (name "julia-scratch")
3943 (url "https://github.com/JuliaPackaging/Scratch.jl")
3944 (commit (string-append "v" version))))
3945 (file-name (git-file-name name version))
3948 "09xni9rrrax17fxjz04j1b48mk9ffww5rcbagh66jklr89mrkqhx"))))
3949 (build-system julia-build-system)
3951 `(#:tests? #f)) ; Test suite tries to access the Julia package registry.
3952 (home-page "https://github.com/JuliaPackaging/Scratch.jl")
3953 (synopsis "Scratch spaces for all your persistent mutable data needs")
3954 (description "This repository implements the scratch spaces API for
3955 package-specific mutable containers of data. These spaces can contain datasets,
3956 text, binaries, or any other kind of data that would be convenient to store in
3957 a location specific to your package. As compared to Artifacts, these containers
3958 of data are mutable. Because the scratch space location on disk is not very
3959 user-friendly, scratch spaces should, in general, not be used for a storing
3960 files that the user must interact with through a file browser.")
3961 (license license:expat)))
3963 (define-public julia-showoff
3965 (name "julia-showoff")
3971 (url "https://github.com/JuliaGraphics/Showoff.jl")
3972 (commit (string-append "v" version))))
3973 (file-name (git-file-name name version))
3975 (base32 "1g4hqvjjpwbrs7fnllyl5w66yj6qlvpvzpygym2nvf01m1ps6m53"))))
3976 (build-system julia-build-system)
3977 (home-page "https://github.com/JuliaGraphics/Showoff.jl")
3978 (synopsis "Nicely format an array of n things for tables and plots")
3979 (description "@code{Showoff} provides an interface for consistently
3980 formatting an array of n things, e.g. numbers, dates, unitful values. It's used
3981 in @code{Gadfly}, @code{Plots} and @code{Makie} to label axes and keys.")
3982 (license license:expat)))
3984 (define-public julia-simpletraits
3986 (name "julia-simpletraits")
3992 (url "https://github.com/mauro3/SimpleTraits.jl")
3993 (commit (string-append "v" version))))
3994 (file-name (git-file-name name version))
3996 (base32 "1qvmkqcvhc2nilvkk36szccxdlcv9ls2i0ksxgl2yfjr3b3qlr05"))))
3997 (build-system julia-build-system)
3999 `(("julia-macrotools" ,julia-macrotools)))
4000 (home-page "https://github.com/mauro3/SimpleTraits.jl")
4001 (synopsis "Simple Traits for Julia")
4002 (description "This package provides a macro-based implementation of traits.
4003 The main idea behind traits is to group types outside the type-hierarchy and to
4004 make dispatch work with that grouping. The difference to Union-types is that
4005 types can be added to a trait after the creation of the trait, whereas Union
4006 types are fixed after creation.")
4007 (license license:expat)))
4009 (define-public julia-sortingalgorithms
4011 (name "julia-sortingalgorithms")
4017 (url "https://github.com/JuliaCollections/SortingAlgorithms.jl")
4018 (commit (string-append "v" version))))
4019 (file-name (git-file-name name version))
4021 (base32 "173x77a80xnh99viqa3r7rgdaksvxaw8xyfqw09gwvp4p2zrxivb"))))
4022 (build-system julia-build-system)
4024 `(#:tests? #f)) ; cycle with StatsBase.jl
4026 `(("julia-datastructures" ,julia-datastructures)))
4028 ; `(("julia-statsbase" ,julia-statsbase)))
4029 (home-page "https://github.com/JuliaCollections/SortingAlgorithms.jl")
4030 (synopsis "Extra sorting algorithms extending Julia's sorting API")
4031 (description "The SortingAlgorithms package provides three sorting
4032 algorithms that can be used with Julia's standard sorting API: heapsort,
4033 timsort and radixsort.")
4034 (license license:expat)))
4036 (define-public julia-specialfunctions
4038 (name "julia-specialfunctions")
4044 (url "https://github.com/JuliaMath/SpecialFunctions.jl")
4045 (commit (string-append "v" version))))
4046 (file-name (git-file-name name version))
4048 (base32 "0nfpnglx7zl9g20w2mgfkg17hcw9ri0shaq2rwplj0ij5pwz8yf0"))))
4049 (build-system julia-build-system)
4051 `(("julia-chainrulestestutils" ,julia-chainrulestestutils)))
4053 `(("julia-chainrulescore" ,julia-chainrulescore)
4054 ("julia-logexpfunctions" ,julia-logexpfunctions)
4055 ("julia-openspecfun-jll" ,julia-openspecfun-jll)))
4056 (home-page "https://github.com/JuliaMath/SpecialFunctions.jl")
4057 (synopsis "Special mathematical functions")
4058 (description "This package provides special mathematical functions,
4059 including Bessel, Hankel, Airy, error, Dawson, exponential (or sine and
4060 cosine) integrals, eta, zeta, digamma, inverse digamma, trigamma, and
4061 polygamma functions.")
4062 (license license:expat)))
4064 (define-public julia-splitapplycombine
4066 (name "julia-splitapplycombine")
4072 (url "https://github.com/JuliaData/SplitApplyCombine.jl")
4073 (commit (string-append "v" version))))
4074 (file-name (git-file-name name version))
4076 (base32 "1qzaqvk57b0s5krzn8bxkzmr5kz6hi9dm3jbf2sl7z4vznsgbn9x"))))
4077 (build-system julia-build-system)
4079 `(("julia-dictionaries" ,julia-dictionaries)
4080 ("julia-indexing" ,julia-indexing)))
4081 (home-page "https://github.com/JuliaData/SplitApplyCombine.jl")
4082 (synopsis "Split-apply-combine strategies for Julia")
4083 (description "@code{SplitApplyCombine.jl} provides high-level, generic tools
4084 for manipulating data - particularly focussing on data in nested containers. An
4085 emphasis is placed on ensuring split-apply-combine strategies are easy to apply,
4086 and work reliably for arbitrary iterables and in an optimized way with the data
4087 structures included in Julia's standard library.")
4088 (license license:expat)))
4090 (define-public julia-stablerngs
4092 (name "julia-stablerngs")
4098 (url "https://github.com/JuliaRandom/StableRNGs.jl")
4099 (commit (string-append "v" version))))
4100 (file-name (git-file-name name version))
4102 (base32 "1cw4wc38qbgmrrx0jjwjhynnarrzjkh0yyz242zj272brbci7p1r"))))
4103 (build-system julia-build-system)
4104 (home-page "https://github.com/JuliaRandom/StableRNGs.jl")
4105 (synopsis "Julia RNG with stable streams")
4106 (description "This package intends to provide a simple RNG with stable
4107 streams, suitable for tests in packages which need reproducible streams of
4108 random numbers across Julia versions. Indeed, the Julia RNGs provided by
4109 default are documented to have non-stable streams (which for example enables
4110 some performance improvements).")
4111 (license license:expat)))
4113 (define-public julia-stackviews
4115 (name "julia-stackviews")
4121 (url "https://github.com/JuliaArrays/StackViews.jl")
4122 (commit (string-append "v" version))))
4123 (file-name (git-file-name name version))
4125 (base32 "1fwiaxdpx1z9dli3jr8kyraych0jbdiny3qklynf0r13px25r6i7"))))
4126 (build-system julia-build-system)
4128 `(#:tests? #f ; Documenter.jl not packaged yet
4130 (modify-phases %standard-phases
4131 (add-after 'unpack 'skip-doctest
4133 (substitute* "test/runtests.jl"
4134 ((".*doctest.*") ""))
4137 `(("julia-offsetarrays" ,julia-offsetarrays)))
4139 ; `(("julia-aqua" ,julia-aqua)
4140 ; ("julia-documenter" ,julia-documenter)))
4141 (home-page "https://github.com/JuliaArrays/StackViews.jl")
4142 (synopsis "No more catcat")
4143 (description "StackViews provides only one array type: @code{StackView}.
4144 There are multiple ways to understand @code{StackView}:
4146 @item inverse of @code{eachslice}
4147 @item @code{cat} variant
4149 @item lazy version of @code{repeat} special case
4151 (license license:expat)))
4153 (define-public julia-static
4155 (name "julia-static")
4161 (url "https://github.com/SciML/Static.jl")
4162 (commit (string-append "v" version))))
4163 (file-name (git-file-name name version))
4165 (base32 "19k7h47zhz3zz28i0l4b3cc0r07pzp8kf35z0yammpy361b644l2"))))
4166 (build-system julia-build-system)
4168 `(("julia-ifelse" ,julia-ifelse)))
4170 `(("julia-aqua" ,julia-aqua)))
4171 (home-page "https://github.com/SciML/Static.jl")
4172 (synopsis "Static types useful for dispatch and generated functions")
4173 (description "Static.jl defines a limited set of statically parameterized
4174 types and a common interface that is shared between them.")
4175 (license license:expat)))
4177 (define-public julia-staticarrays
4179 (name "julia-staticarrays")
4185 (url "https://github.com/JuliaArrays/StaticArrays.jl")
4186 (commit (string-append "v" version))))
4187 (file-name (git-file-name name version))
4189 (base32 "041mijzgzm8r61a3gwspr2wcxjikqksvj2rbnl4gmcy41alqmx79"))))
4190 (build-system julia-build-system)
4192 `(("julia-benchmarktools" ,julia-benchmarktools)))
4193 (home-page "https://github.com/JuliaArrays/StaticArrays.jl")
4194 (synopsis "Statically sized arrays")
4195 (description "This package provides a framework for implementing
4196 statically sized arrays in Julia, using the abstract type
4197 @code{StaticArray{Size,T,N} <: AbstractArray{T,N}}. Subtypes of
4198 @code{StaticArray} will provide fast implementations of common array and
4199 linear algebra operations.")
4200 (license license:expat)))
4202 (define-public julia-statsapi
4204 (name "julia-statsapi")
4210 (url "https://github.com/JuliaStats/StatsAPI.jl")
4211 (commit (string-append "v" version))))
4212 (file-name (git-file-name name version))
4214 (base32 "1k1c3s7i5wzkz4r9fyy4gd7wb97p0qgbc7bmaajm16zqipfmy2bv"))))
4215 (build-system julia-build-system)
4216 (home-page "https://juliastats.org/")
4217 (synopsis "Statistics-focused namespace for packages to share functions")
4218 (description "This package provides a namespace for data-related generic
4219 function definitions to solve the optional dependency problem; packages wishing
4220 to share and/or extend functions can avoid depending directly on each other by
4221 moving the function definition to @code{StatsAPI.jl} and each package taking a
4223 (license license:expat)))
4225 (define-public julia-statsbase
4227 (name "julia-statsbase")
4233 (url "https://github.com/JuliaStats/StatsBase.jl")
4234 (commit (string-append "v" version))))
4235 (file-name (git-file-name name version))
4237 (base32 "02y4pm5yvg713a2pn970bbcfkrn2h133rxbxk1da18svhqw3czhi"))))
4238 (build-system julia-build-system)
4240 `(("julia-dataapi" ,julia-dataapi)
4241 ("julia-datastructures" ,julia-datastructures)
4242 ("julia-missings" ,julia-missings)
4243 ("julia-sortingalgorithms" ,julia-sortingalgorithms)
4244 ("julia-statsapi" ,julia-statsapi)))
4246 `(("julia-stablerngs" ,julia-stablerngs)))
4247 (home-page "https://github.com/JuliaStats/StatsBase.jl")
4248 (synopsis "Basic statistics for Julia")
4249 (description "StatsBase.jl is a Julia package that provides basic support
4250 for statistics. Particularly, it implements a variety of statistics-related
4251 functions, such as scalar statistics, high-order moment computation, counting,
4252 ranking, covariances, sampling, and empirical density estimation.")
4253 (license license:expat)))
4255 (define-public julia-stringdistances
4257 (name "julia-stringdistances")
4263 (url "https://github.com/matthieugomez/StringDistances.jl")
4264 (commit (string-append "v" version))))
4265 (file-name (git-file-name name version))
4267 (base32 "0n5707wplbibzhhv1xmshvc025d7xk6mnikclc3hvq5cdc0gy9f7"))))
4268 (build-system julia-build-system)
4270 `(("julia-distances" ,julia-distances)))
4271 (home-page "https://github.com/matthieugomez/StringDistances.jl")
4272 (synopsis "String Distances in Julia")
4273 (description "This package provides string distances in Julia. Distances
4274 are defined for @code{AbstractStrings}, and any iterator that define
4275 @code{length()}. The package also defines Distance \"modifiers\" that can be
4276 applied to any distance.")
4277 (license license:expat)))
4279 (define-public julia-structarrays
4281 (name "julia-structarrays")
4287 (url "https://github.com/JuliaArrays/StructArrays.jl")
4288 (commit (string-append "v" version))))
4289 (file-name (git-file-name name version))
4291 (base32 "0rjcpyjwzg70n87q5r9c5i1qzigavncslxssm3rk5a3y549py56v"))))
4292 (build-system julia-build-system)
4294 `(("julia-dataapi" ,julia-dataapi)
4295 ("julia-staticarrays" ,julia-staticarrays)
4296 ("julia-tables" ,julia-tables)))
4298 `(("julia-documenter" ,julia-documenter)
4299 ("julia-offsetarrays" ,julia-offsetarrays)
4300 ("julia-pooledarrays" ,julia-pooledarrays)
4301 ("julia-typedtables" ,julia-typedtables)
4302 ("julia-weakrefstrings" ,julia-weakrefstrings)))
4303 (home-page "https://github.com/JuliaArrays/StructArrays.jl")
4304 (synopsis "Efficient implementation of struct arrays in Julia")
4305 (description "This package introduces the type @code{StructArray} which is
4306 an @code{AbstractArray} whose elements are @code{struct} (for example
4307 @code{NamedTuples}, or @code{ComplexF64}, or a custom user defined
4308 @code{struct}). While a @code{StructArray} iterates @code{structs}, the layout
4309 is column based (meaning each field of the @code{struct} is stored in a separate
4311 (license license:expat)))
4313 (define-public julia-structtypes
4315 (name "julia-structtypes")
4321 (url "https://github.com/JuliaData/StructTypes.jl")
4322 (commit (string-append "v" version))))
4323 (file-name (git-file-name name version))
4325 (base32 "02mn4kkhn3927dk7945c9bjwlldihydxgn5ilmqqvs8dknvbw8p1"))))
4326 (build-system julia-build-system)
4327 (home-page "https://juliadata.github.io/StructTypes.jl/stable/")
4328 (synopsis "Abstract definitions and convenience methods for Julia objects")
4329 (description "This package provides the @code{StructTypes.StructType} trait
4330 for Julia types to declare the kind of \"struct\" they are, providing
4331 serialization/deserialization packages patterns and strategies to automatically
4332 construct objects.")
4333 (license license:expat)))
4335 (define-public julia-suppressor
4337 (name "julia-suppressor")
4343 (url "https://github.com/JuliaIO/Suppressor.jl")
4344 (commit (string-append "v" version))))
4345 (file-name (git-file-name name version))
4347 (base32 "0v6pxvf8lzrqjc676snvlszh14ridl442g2h6syfjiy75pk7mdyc"))))
4348 (build-system julia-build-system)
4349 (home-page "https://github.com/JuliaIO/Suppressor.jl")
4350 (synopsis "Capture stdout and sterr")
4351 (description "Julia macros for suppressing and/or capturing output (stdout),
4352 warnings (stderr) or both streams at the same time.")
4353 (license license:expat)))
4355 (define-public julia-tableiointerface
4357 (name "julia-tableiointerface")
4363 (url "https://github.com/lungben/TableIOInterface.jl")
4364 (commit (string-append "v" version))))
4365 (file-name (git-file-name name version))
4367 (base32 "0p2fi9jbyfg2j6rysv4if7dx8qw2mssb04i75j1zq607j8707kvn"))))
4368 (build-system julia-build-system)
4369 (home-page "https://github.com/lungben/TableIOInterface.jl")
4370 (synopsis "File formats based on file extensions")
4371 (description "This package determines tabular file formats based on file
4372 extensions. It is intended to be the base both for @code{TableIO.jl} and for
4373 the @code{Pluto.jl} tabular data import functionality.")
4374 (license license:expat)))
4376 (define-public julia-tables
4378 (name "julia-tables")
4384 (url "https://github.com/JuliaData/Tables.jl")
4385 (commit (string-append "v" version))))
4386 (file-name (git-file-name name version))
4388 (base32 "1sqqagzqvav8b1rv5ywwbgy9ixvlmipq95fkwfwn0m8769i8jwzb"))))
4389 (build-system julia-build-system)
4391 `(("julia-dataapi" ,julia-dataapi)
4392 ("julia-datavalueinterfaces" ,julia-datavalueinterfaces)
4393 ("julia-iteratorinterfaceextensions" ,julia-iteratorinterfaceextensions)
4394 ("julia-tabletraits" ,julia-tabletraits)))
4396 `(("julia-datavalues" ,julia-datavalues)
4397 ("julia-queryoperators" ,julia-queryoperators)))
4398 (home-page "https://github.com/JuliaData/Tables.jl")
4399 (synopsis "Interface for tables in Julia")
4400 (description "The @code{Tables.jl} package provides simple, yet powerful
4401 interface functions for working with all kinds tabular data.")
4402 (license license:expat)))
4404 (define-public julia-tableshowutils
4405 ;; The 0.2.5 release is not fully compatable with newer versions of Julia.
4406 (let ((commit "c4e02d8b9bbb31fc81ed6618955e9b1c7cb04460")
4409 (name "julia-tableshowutils")
4415 (url "https://github.com/queryverse/TableShowUtils.jl")
4417 (file-name (git-file-name name version))
4419 (base32 "0gp3hpj3jvzfhkp9r345vfic2j2n2s60729wv38hwn75csp74cg5"))))
4420 (build-system julia-build-system)
4422 `(("julia-datavalues" ,julia-datavalues)
4423 ("julia-json" ,julia-json)))
4424 (home-page "https://github.com/queryverse/TableShowUtils.jl")
4425 (synopsis "Implement show for TableTraits.jl types")
4426 (description "This package provides some common helper functions that make
4427 it easier to implement various @code{Base.show} functions for types that
4428 participate in the @code{TableTraits.jl} ecosystem.")
4429 (license license:expat))))
4431 (define-public julia-tabletraits
4433 (name "julia-tabletraits")
4439 (url "https://github.com/queryverse/TableTraits.jl")
4440 (commit (string-append "v" version))))
4441 (file-name (git-file-name name version))
4443 (base32 "08ssb2630wm6j8f2qa985mn2vfibfm5kjcn4ayl2qkhfcyp8daw4"))))
4444 (build-system julia-build-system)
4446 `(("julia-iteratorinterfaceextensions" ,julia-iteratorinterfaceextensions)))
4447 (home-page "https://github.com/queryverse/TableTraits.jl")
4448 (synopsis "Traits for Julia tables")
4449 (description "TableTraits defines a generic interface for tabular data.")
4450 (license license:expat)))
4452 (define-public julia-tensorcore
4454 (name "julia-tensorcore")
4460 (url "https://github.com/JuliaMath/TensorCore.jl")
4461 (commit (string-append "v" version))))
4462 (file-name (git-file-name name version))
4464 (base32 "1sy3in4a1rl3l2vk0cm9mzg2nkva7syhr7i35si0kbzhkdwpbqjy"))))
4465 (build-system julia-build-system)
4466 (home-page "https://github.com/JuliaMath/TensorCore.jl")
4467 (synopsis "Tensor-algebra definitions")
4468 (description "This package is intended as a lightweight foundation for
4469 tensor operations across the Julia ecosystem. Currently it exports three
4470 operations: @acronym{hadamard, elementwise multiplication}, @acronym{tensor,
4471 product preserves all dimensions}, and @acronym{boxdot, contracts neighboring
4473 (license license:expat)))
4475 (define-public julia-testimages
4477 (name "julia-testimages")
4483 (url "https://github.com/JuliaImages/TestImages.jl")
4484 (commit (string-append "v" version))))
4485 (file-name (git-file-name name version))
4487 (base32 "1lnfsmx33qspyvxw0cykwh7il8xykjpcw1080sisn95ngz2qhdmy"))))
4488 (build-system julia-build-system)
4490 `(#:tests? #f)) ; cycle with ImageMagick.jl
4492 `(("julia-axisarrays" ,julia-axisarrays)
4493 ("julia-colortypes" ,julia-colortypes)
4494 ("julia-fileio" ,julia-fileio)
4495 ("julia-offsetarrays" ,julia-offsetarrays)
4496 ("julia-stringdistances" ,julia-stringdistances)))
4498 ; `(("julia-colors" ,julia-colors)
4499 ; ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)
4500 ; ("julia-imagecontrastadjustment" ,julia-imagecontrastadjustment)
4501 ; ("julia-imagemagick" ,julia-imagemagick)
4502 ; ("julia-ometiff" ,julia-ometiff)
4503 ; ("julia-referencetests" ,julia-referencetests)))
4504 (home-page "https://testimages.juliaimages.org/")
4505 (synopsis "Standard test images for Julia")
4506 (description "This package provides a convenient Julia interface for loading
4507 standard named test images and example images for the internal usage in
4508 @code{JuliaImages}. This can be used in conjunction with the @code{Images}
4510 (license license:expat)))
4512 (define-public julia-tracker
4514 (name "julia-tracker")
4520 (url "https://github.com/FluxML/Tracker.jl")
4521 (commit (string-append "v" version))))
4522 (file-name (git-file-name name version))
4524 (base32 "1s4mdywbp7nli7z985fqaj1rs4i6d92b1jx3lhg0qhk1s5wc0v8j"))
4525 (patches (search-patches "julia-tracker-16-compat.patch"))))
4526 (build-system julia-build-system)
4528 `(("julia-adapt" ,julia-adapt)
4529 ("julia-diffrules" ,julia-diffrules)
4530 ("julia-forwarddiff" ,julia-forwarddiff)
4531 ("julia-macrotools" ,julia-macrotools)
4532 ("julia-nanmath" ,julia-nanmath)
4533 ("julia-nnlib" ,julia-nnlib)
4534 ("julia-requires" ,julia-requires)
4535 ("julia-specialfunctions" ,julia-specialfunctions)))
4537 `(("julia-pdmats" ,julia-pdmats)))
4538 (home-page "https://github.com/FluxML/Tracker.jl")
4539 (synopsis "Operator overloading reverse-mode automatic differentiator")
4540 (description "@code{Tracker.jl} previously provided @code{Flux.jl} with
4541 automatic differentiation for its machine learning platform.")
4542 (license license:expat)))
4544 (define-public julia-typedtables
4546 (name "julia-typedtables")
4552 (url "https://github.com/JuliaData/TypedTables.jl")
4553 (commit (string-append "v" version))))
4554 (file-name (git-file-name name version))
4556 (base32 "0nk6zhqvl2r8yhjdhb59kxq0srd3vy4ysg4d8rszj9a43dnn3w3i"))))
4557 (build-system julia-build-system)
4559 `(("julia-adapt" ,julia-adapt)
4560 ("julia-splitapplycombine" ,julia-splitapplycombine)
4561 ("julia-tables" ,julia-tables)))
4562 (home-page "https://github.com/JuliaData/TypedTables.jl")
4563 (synopsis "Column-based storage for data analysis in Julia")
4564 (description "@code{TypedTables.jl} provides two column-based storage
4565 containers: @code{Table} and @code{FlexTable}, both of which represent an array
4566 of @code{NamedTuples}. This package is designed to be lightweight, easy-to-use
4567 and fast, and presents a very minimal new interface to learn.")
4568 (license license:expat)))
4570 (define-public julia-unpack
4572 (name "julia-unpack")
4578 (url "https://github.com/mauro3/UnPack.jl")
4579 (commit (string-append "v" version))))
4580 (file-name (git-file-name name version))
4582 (base32 "066v1px72zidnvhl0rczhh07rcfwvli0jx5nprrgyi1dvj3mps2a"))))
4583 (build-system julia-build-system)
4584 (home-page "https://github.com/mauro3/UnPack.jl")
4585 (synopsis "Pack and Unpack macros for Julia")
4586 (description "The @code{@@unpack} and @code{@@pack!} macros work to unpack
4587 types, modules, and dictionaries.")
4588 (license license:expat)))
4590 (define-public julia-uris
4598 (url "https://github.com/JuliaWeb/URIs.jl")
4599 (commit (string-append "v" version))))
4600 (file-name (git-file-name name version))
4602 (base32 "0kp4hg3kknkm2smlcizqfd33l9x4vkahc2714gnbjp39fj285b92"))))
4603 (build-system julia-build-system)
4605 '(#:julia-package-name "URIs" ;required to run tests
4607 (modify-phases %standard-phases
4608 (add-before 'check 'change-dir
4609 ;; Tests must be run from the testdir
4610 (lambda* (#:key source outputs #:allow-other-keys)
4611 (let ((out (assoc-ref outputs "out")))
4613 (string-append out "/share/julia/packages/URIs/test")))
4615 ;; required for tests
4616 (inputs `(("julia-json" ,julia-json)))
4617 (home-page "https://github.com/JuliaWeb/URIs.jl")
4618 (synopsis "URI parsing in Julia")
4619 (description "@code{URIs.jl} is a Julia package that allows parsing and
4620 working with @acronym{URIs,Uniform Resource Identifiers}, as defined in RFC
4622 (license license:expat)))
4624 (define-public julia-unitful
4626 (name "julia-unitful")
4632 (url "https://github.com/PainterQubits/Unitful.jl")
4633 (commit (string-append "v" version))))
4634 (file-name (git-file-name name version))
4636 (base32 "10qwscd15dnmvx116dwvg99m7kmwgmj5ahdkq7psiq48lcc554gq"))))
4637 (build-system julia-build-system)
4639 `(("julia-constructionbase" ,julia-constructionbase)))
4640 (home-page "https://painterqubits.github.io/Unitful.jl/stable/")
4641 (synopsis "Physical units in Julia")
4642 (description "This package supports SI units and also many other unit
4644 (license license:expat)))
4646 (define-public julia-versionparsing
4648 (name "julia-versionparsing")
4654 (url "https://github.com/JuliaInterop/VersionParsing.jl")
4655 (commit (string-append "v" version))))
4656 (file-name (git-file-name name version))
4658 (base32 "060s72dsnpavgilf7f7315lw2sn4npk8lkndmj6bg7i23hppiwva"))))
4659 (build-system julia-build-system)
4660 (home-page "https://github.com/JuliaInterop/VersionParsing.jl")
4661 (synopsis "Flexible VersionNumber parsing in Julia")
4662 (description "The @code{VersionParsing} package implements flexible parsing
4663 of version-number strings into Julia's built-in @code{VersionNumber} type, via
4664 the @code{vparse(string)} function. Unlike the @code{VersionNumber(string)}
4665 constructor, @code{vparse(string)} can handle version-number strings in a much
4666 wider range of formats than are encompassed by the semver standard. This is
4667 useful in order to support @code{VersionNumber} comparisons applied to
4668 \"foreign\" version numbers from external packages.")
4669 (license license:expat)))
4671 (define-public julia-weakrefstrings
4673 (name "julia-weakrefstrings")
4679 (url "https://github.com/JuliaData/WeakRefStrings.jl")
4680 (commit (string-append "v" version))))
4681 (file-name (git-file-name name version))
4683 (base32 "14h1vdnc3rx87w6v2rr59lgb4kai2hd1wzqpxhmzsi8karg2z219"))))
4684 (build-system julia-build-system)
4686 `(("julia-dataapi" ,julia-dataapi)
4687 ("julia-parsers" ,julia-parsers)))
4688 (home-page "https://github.com/JuliaData/WeakRefStrings.jl")
4689 (synopsis "Efficient string representation and transfer in Julia")
4690 (description "This package provides a minimal String type for Julia that
4691 allows for efficient string representation and transfer")
4692 (license license:expat)))
4694 (define-public julia-woodburymatrices
4696 (name "julia-woodburymatrices")
4702 (url "https://github.com/timholy/WoodburyMatrices.jl")
4703 (commit (string-append "v" version))))
4704 (file-name (git-file-name name version))
4706 (base32 "04yykivi8zrbryxlmb0p5xa6lma8iq22r5s863117dnnqj5gaffd"))))
4707 (build-system julia-build-system)
4708 (home-page "https://github.com/timholy/WoodburyMatrices.jl")
4709 (synopsis "Support for the Woodbury matrix identity for Julia")
4710 (description "This package provides support for the Woodbury matrix identity
4711 for the Julia programming language. This is a generalization of the
4712 Sherman-Morrison formula. Note that the Woodbury matrix identity is notorious
4713 for floating-point roundoff errors, so be prepared for a certain amount of
4714 inaccuracy in the result.")
4715 (license license:expat)))
4717 (define-public julia-zipfile
4719 (name "julia-zipfile")
4725 (url "https://github.com/fhs/ZipFile.jl")
4726 (commit (string-append "v" version))))
4727 (file-name (git-file-name name version))
4730 "15bm3ki5mb9nvqs2byznrryq0bilnjcvsfy3k05hxhk9vapilw7k"))))
4731 (build-system julia-build-system)
4733 `(("julia-zlib-jll" ,julia-zlib-jll)))
4734 (home-page "https://github.com/fhs/ZipFile.jl")
4735 (synopsis "Read/Write ZIP archives in Julia")
4736 (description "This module provides support for reading and writing ZIP
4737 archives in Julia.")
4738 (license license:expat)))
4740 (define-public julia-zygoterules
4742 (name "julia-zygoterules")
4748 (url "https://github.com/FluxML/ZygoteRules.jl")
4749 (commit (string-append "v" version))))
4750 (file-name (git-file-name name version))
4752 (base32 "07i2mf6rr5b8i6l82qgwl5arsb5pwyyzyfasgnszhdqllk9501bs"))))
4753 (build-system julia-build-system)
4755 `(("julia-macrotools" ,julia-macrotools)))
4756 (home-page "https://github.com/FluxML/ZygoteRules.jl")
4757 (synopsis "Add minimal custom gradients to Zygote")
4758 (description "Minimal package which enables to add custom gradients to
4759 Zygote, without depending on Zygote itself.")
4760 (license license:expat)))
4762 (define-public julia-zygote
4764 (name "julia-zygote")
4770 (url "https://github.com/FluxML/Zygote.jl")
4771 (commit (string-append "v" version))))
4772 (file-name (git-file-name name version))
4774 (base32 "1cx66sp30s34ln6p0fpqk1ggjxfxg2gp8791zz3cl85dmk4dl14b"))))
4775 (build-system julia-build-system)
4777 `(#:tests? #f)) ;require CUDA, not packaged yet
4779 `(("julia-abstractffs" ,julia-abstractffts)
4780 ("julia-chainrules" ,julia-chainrules)
4781 ("julia-diffrules" ,julia-diffrules)
4782 ("julia-fillarrays" ,julia-fillarrays)
4783 ("julia-forwarddiff" ,julia-forwarddiff)
4784 ("julia-irtools" ,julia-irtools)
4785 ("julia-macrotools" ,julia-macrotools)
4786 ("julia-nanmath" ,julia-nanmath)
4787 ("julia-requires" ,julia-requires)
4788 ("julia-specialfunctions" ,julia-specialfunctions)
4789 ("julia-zygote-rules" ,julia-zygoterules)))
4790 (home-page "https://fluxml.ai/Zygote.jl")
4791 (synopsis "Automatic differentiation in Julia")
4792 (description "Zygote provides source-to-source automatic
4793 differentiation (AD) in Julia, and is the next-generation AD system for the
4794 Flux differentiable programming framework.")
4795 (license license:expat)))