From a6fedf1f37dd031829caae0b743016cd5d52f06c Mon Sep 17 00:00:00 2001 From: zimoun Date: Wed, 24 Jul 2019 20:21:57 +0200 Subject: [PATCH] gnu: Add r-flowcore. * gnu/packages/bioconductor.scm (r-flowcore): New variable. Signed-off-by: Ricardo Wurmus --- gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++ 1 file changed, 30 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 649b64a4d7..93dec5bd1d 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -4797,3 +4797,33 @@ read mapping, read counting, SNP calling, structural variant detection and gene fusion discovery. It can be applied to all major sequencing techologies and to both short and long sequence reads.") (license license:gpl3))) + +(define-public r-flowcore + (package + (name "r-flowcore") + (version "1.50.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "flowCore" version)) + (sha256 + (base32 + "0pvcyzycsmgc8iw60q9xnhllfan6ihwpz3gvk8h1n9jmhpxzylan")))) + (properties `((upstream-name . "flowCore"))) + (build-system r-build-system) + (propagated-inputs + `(("r-bh" ,r-bh) + ("r-biobase" ,r-biobase) + ("r-biocgenerics" ,r-biocgenerics) + ("r-corpcor" ,r-corpcor) + ("r-graph" ,r-graph) + ("r-mass" ,r-mass) + ("r-matrixstats" ,r-matrixstats) + ("r-rcpp" ,r-rcpp) + ("r-rrcov" ,r-rrcov))) + (home-page "https://bioconductor.org/packages/flowCore") + (synopsis "Basic structures for flow cytometry data") + (description + "This package provides S4 data structures and basic functions to deal +with flow cytometry data.") + (license license:artistic2.0))) -- 2.20.1