jackhill/guix/guix.git
5 years agognu: Add gnu-efi.
Danny Milosavljevic [Wed, 23 Jan 2019 00:03:01 +0000 (01:03 +0100)]
gnu: Add gnu-efi.

* gnu/packages/efi.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

5 years agostore: 'log-file' honors 'GUIX_LOG_DIRECTORY'.
Ludovic Courtès [Sun, 3 Feb 2019 21:32:13 +0000 (22:32 +0100)]
store: 'log-file' honors 'GUIX_LOG_DIRECTORY'.

* guix/store.scm (derivation-log-file): Use %LOCALSTATEDIR or
"GUIX_LOG_DIRECTORY" instead of (dirname %STATE-DIRECTORY).

5 years agodaemon: Remove unused 'NIX_DATA_DIR' environment variable.
Ludovic Courtès [Sun, 3 Feb 2019 21:30:18 +0000 (22:30 +0100)]
daemon: Remove unused 'NIX_DATA_DIR' environment variable.

* nix/libstore/globals.hh (Settings)[nixDataDir]: Remove.
* nix/libstore/globals.cc (Settings:processEnvironment): Remove setting
of 'nixDataDir'.
* nix/local.mk (libstore_a_CPPFLAGS): Remove '-DNIX_DATA_DIR'.

5 years agoself: Ensure the daemon refers to the right 'guix' command.
Ludovic Courtès [Sun, 3 Feb 2019 21:13:55 +0000 (22:13 +0100)]
self: Ensure the daemon refers to the right 'guix' command.

Previously it would refer to
/var/guix/profiles/per-user/root/current-guix/bin/guix, which would fail
when that profile does not exist.  This is notably the case when using
'channel-instance->package' as done in commit
7e6d8d366a61f951936ed83371877ce006f679f6.

* gnu/packages/package-management.scm (guix-daemon)[arguments]: In
'install phase, honor environment variable 'GUIX'.
* guix/self.scm (whole-package)[wrap]: New procedure.
Use it.

5 years agodaemon: Rename 'NIX_STATE_DIR' and 'NIX_DB_DIR' environment variables.
Ludovic Courtès [Sun, 3 Feb 2019 21:10:06 +0000 (22:10 +0100)]
daemon: Rename 'NIX_STATE_DIR' and 'NIX_DB_DIR' environment variables.

Fixes <https://bugs.gnu.org/22459>.
Reported by Jeff Mickey <j@codemac.net>.

* guix/config.scm.in (%state-directory): Change NIX_STATE_DIR to
GUIX_STATE_DIRECTORY.
(%store-database-directory): Change NIX_DB_DIR to
GUIX_DATABASE_DIRECTORY.
* nix/libstore/globals.cc (Settings::processEnvironment): Likewise.
* guix/self.scm (make-config.scm): Likewise.
* build-aux/build-self.scm (make-config.scm): Likewise.
* build-aux/test-env.in: Likewise.
* tests/derivations.scm ("derivation #:leaked-env-vars"): Likewise.
* tests/guix-build.sh (GUIX_DAEMON_SOCKET): Likewise.
* tests/guix-daemon.sh (socket): Likewise.

5 years agodoc: Show how to install Emacs, Guile, and Geiser.
Ludovic Courtès [Sun, 3 Feb 2019 17:35:51 +0000 (18:35 +0100)]
doc: Show how to install Emacs, Guile, and Geiser.

* doc/contributing.texi (The Perfect Setup): Show "guix package -i"
command line.

5 years agognu: Add guile-picture-language.
Ricardo Wurmus [Sun, 3 Feb 2019 00:37:12 +0000 (01:37 +0100)]
gnu: Add guile-picture-language.

* gnu/packages/guile-xyz.scm (guile-picture-language): New variable.

5 years agoUpdate copyright header.
Nicolas Goaziou [Sat, 2 Feb 2019 21:54:12 +0000 (22:54 +0100)]
Update copyright header.

5 years agognu: giac-xcas: Update to 1.5.0-37.
Nicolas Goaziou [Sat, 2 Feb 2019 21:52:05 +0000 (22:52 +0100)]
gnu: giac-xcas: Update to 1.5.0-37.

* gnu/packages/algebra.scm (giac-xcas): Update to 1.5.0-37.

5 years agognu: milkytracker: Add LHA decompression support.
Kei Kebreau [Sat, 2 Feb 2019 14:18:05 +0000 (09:18 -0500)]
gnu: milkytracker: Add LHA decompression support.

* gnu/packages/music.scm (milkytracker)[inputs]: Add lhasa.

5 years agoUpdate some copyright headers
Nicolas Goaziou [Sat, 2 Feb 2019 12:41:46 +0000 (13:41 +0100)]
Update some copyright headers

5 years agognu: wireshark: Update to 2.6.6.
Nicolas Goaziou [Sat, 2 Feb 2019 12:39:58 +0000 (13:39 +0100)]
gnu: wireshark: Update to 2.6.6.

* gnu/packages/networking.scm (wireshark): Update to 2.6.6.

5 years agognu: Fix syntax error in emacs-xyz.scm.
Clément Lassieur [Sat, 2 Feb 2019 11:50:13 +0000 (12:50 +0100)]
gnu: Fix syntax error in emacs-xyz.scm.

* gnu/packages/emacs-xyz.scm (emacs-repo): Add missing parentheses and
license.

5 years agognu: Add emacs-google-c-style.
Mathieu Othacehe [Sat, 2 Feb 2019 10:21:18 +0000 (11:21 +0100)]
gnu: Add emacs-google-c-style.

* gnu/packages/emacs-xyz.scm (emacs-google-c-style): New variable.

5 years agognu: Add emacs-alect-themes.
Mathieu Othacehe [Sat, 2 Feb 2019 10:20:11 +0000 (11:20 +0100)]
gnu: Add emacs-alect-themes.

* gnu/packages/emacs-xyz.scm (emacs-alect-themes): New variable.

5 years agognu: silkaj: Update to 0.6.5.
Nicolas Goaziou [Sat, 2 Feb 2019 10:38:28 +0000 (11:38 +0100)]
gnu: silkaj: Update to 0.6.5.

* gnu/packages/finance.scm (silkaj): Update to 0.6.5.
[inputs]: Add python-click, python-dunitpery.  Remove python-pyaes,
python-scrypt, and python-commandlines.

5 years agognu: python-duniterpy: Update to 0.52.0.
Nicolas Goaziou [Sat, 2 Feb 2019 10:29:50 +0000 (11:29 +0100)]
gnu: python-duniterpy: Update to 0.52.0.

* gnu/packages/finance.scm (python-duniterpy): Update to 0.52.0.
[propagated-inputs]: Add python-pyaes.

5 years agognu: Add emacs-repo.
Clément Lassieur [Sat, 2 Feb 2019 10:01:02 +0000 (11:01 +0100)]
gnu: Add emacs-repo.

* gnu/packages/emacs-xyz.scm (emacs-repo): New variable.

5 years agognu: Add emacs-dtrt-indent.
Clément Lassieur [Sat, 2 Feb 2019 10:00:49 +0000 (11:00 +0100)]
gnu: Add emacs-dtrt-indent.

* gnu/packages/emacs-xyz.scm (emacs-dtrt-indent): New variable.

5 years agognu: Add emacs-mkmcc-gnuplot-mode.
Arun Isaac [Fri, 25 Jan 2019 11:22:40 +0000 (16:52 +0530)]
gnu: Add emacs-mkmcc-gnuplot-mode.

* gnu/packages/emacs-xyz.scm (emacs-mkmcc-gnuplot-mode): New variable.

5 years agoprofiles: 'manual-database' hook reports progress.
Ludovic Courtès [Fri, 1 Feb 2019 18:25:38 +0000 (19:25 +0100)]
profiles: 'manual-database' hook reports progress.

* guix/profiles.scm (manual-database)[build](compute-entries): Write a
progress report.

5 years agoguix package: '-A' no longer lists deprecated packages.
Ludovic Courtès [Fri, 1 Feb 2019 11:43:42 +0000 (12:43 +0100)]
guix package: '-A' no longer lists deprecated packages.

Fixes a regression introduced in
0ea939fb796fdd4f0d46d3534b2ec6135e0f3dc7.

* guix/scripts/package.scm (process-query) <'list-available>: Change
 #:superseded? to #:deprecated? since that's what
 'fold-available-packages' passes.

5 years agognu: znc: Update to 1.7.2.
Tobias Geerinckx-Rice [Fri, 1 Feb 2019 13:41:50 +0000 (14:41 +0100)]
gnu: znc: Update to 1.7.2.

* gnu/packages/messaging.scm (znc): Update to 1.7.2.

5 years agodoc: Update left-over references to lsh.
Tobias Geerinckx-Rice [Fri, 1 Feb 2019 13:40:31 +0000 (14:40 +0100)]
doc: Update left-over references to lsh.

* doc/guix.texi (Using the Configuration System, Defining Services):
Refer to OpenSSH instead of lsh.

5 years agognu: direnv: Update to 2.15.2.
Leo Famulari [Fri, 1 Feb 2019 11:22:05 +0000 (12:22 +0100)]
gnu: direnv: Update to 2.15.2.

* gnu/packages/shellutils.scm (direnv): Update to 2.15.2.
[inputs]: Use the default Go compiler. Add go-github-com-burntsushi-toml
and go-github-com-direnv-go-dotenv.
[arguments]: Add a 'setup-go-environment' phase.

5 years agognu: Add go-github-com-direnv-go-dotenv.
Leo Famulari [Fri, 1 Feb 2019 11:21:38 +0000 (12:21 +0100)]
gnu: Add go-github-com-direnv-go-dotenv.

* gnu/packages/golang.scm (go-github-com-direnv-go-dotenv): New variable.

5 years agognu: emacs-slime: Update to 2.23.
Pierre Neidhardt [Fri, 1 Feb 2019 16:12:44 +0000 (17:12 +0100)]
gnu: emacs-slime: Update to 2.23.

* gnu/packages/emacs-xyz.scm (emacs-slime): Update to 2.23.

5 years agognu: certbot, python-acme: Update to 0.30.2.
Leo Famulari [Fri, 1 Feb 2019 08:29:20 +0000 (09:29 +0100)]
gnu: certbot, python-acme: Update to 0.30.2.

* gnu/packages/tls.scm (certbot, python-acme): Update to 0.30.2.

5 years agognu: linux-libre: Update to 4.20.6.
Mark H Weaver [Fri, 1 Feb 2019 04:59:06 +0000 (23:59 -0500)]
gnu: linux-libre: Update to 4.20.6.

* gnu/packages/linux.scm (%linux-libre-version): Update to 4.20.6.
(%linux-libre-hash): Update hash.

5 years agognu: linux-libre@4.19: Update to 4.19.19.
Mark H Weaver [Fri, 1 Feb 2019 04:57:57 +0000 (23:57 -0500)]
gnu: linux-libre@4.19: Update to 4.19.19.

* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.19.
(%linux-libre-4.19-hash): Update hash.

5 years agognu: linux-libre@4.14: Update to 4.14.97.
Mark H Weaver [Fri, 1 Feb 2019 04:57:06 +0000 (23:57 -0500)]
gnu: linux-libre@4.14: Update to 4.14.97.

* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.97.
(%linux-libre-4.14-hash): Update hash.

5 years agognu: linux-libre@4.9: Update to 4.9.154.
Mark H Weaver [Fri, 1 Feb 2019 04:56:15 +0000 (23:56 -0500)]
gnu: linux-libre@4.9: Update to 4.9.154.

* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.154.

5 years agognu: imb: Update to 2019.1.
Eric Bavier [Wed, 30 Jan 2019 23:05:03 +0000 (17:05 -0600)]
gnu: imb: Update to 2019.1.

* gnu/packages/benchmark.scm (imb)[source]: Update to 2019.1.  Use
git-download.
[arguments]: Adjust build and install phases for new source organization.  Let
the standard 'install-license-files' phase do its thing.

5 years agognu: r-rmpi: Setup MPI for tests.
Eric Bavier [Wed, 30 Jan 2019 06:48:39 +0000 (00:48 -0600)]
gnu: r-rmpi: Setup MPI for tests.

* gnu/packages/cran.scm (r-rmpi)[arguments]: Add 'mpi-setup phase.

5 years agognu: fftw-openmpi: Setup MPI for tests.
Eric Bavier [Wed, 30 Jan 2019 06:25:22 +0000 (00:25 -0600)]
gnu: fftw-openmpi: Setup MPI for tests.

* gnu/packages/algebra.scm (fftw-openmpi)[arguments]: Add 'mpi-setup phase.

5 years agognu: Add xclock.
Yoshinori Arai [Thu, 31 Jan 2019 02:55:01 +0000 (11:55 +0900)]
gnu: Add xclock.

* gnu/packages/xorg.scm (xclock): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
5 years agognu: Add python-isrcsubmit.
Gabriel Hondet [Wed, 30 Jan 2019 15:40:55 +0000 (16:40 +0100)]
gnu: Add python-isrcsubmit.

* gnu/packages/music.scm (python-isrcsubmit): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
5 years agognu: Add python-discid.
Gabriel Hondet [Wed, 30 Jan 2019 15:36:44 +0000 (16:36 +0100)]
gnu: Add python-discid.

* gnu/packages/music.scm (python-discid): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
5 years agognu: lookingglass: Download from git.
Marius Bakke [Thu, 31 Jan 2019 15:10:03 +0000 (16:10 +0100)]
gnu: lookingglass: Download from git.

* gnu/packages/virtualization.scm (lookingglass)[source]: Change to GIT-FETCH.

5 years agognu: hwloc: Update to 2.0.3.
Marius Bakke [Wed, 30 Jan 2019 19:06:59 +0000 (20:06 +0100)]
gnu: hwloc: Update to 2.0.3.

* gnu/packages/mpi.scm (hwloc-2.0): Update to 2.0.3.

5 years agognu: hwloc@1: Update to 1.11.12.
Marius Bakke [Wed, 30 Jan 2019 19:06:36 +0000 (20:06 +0100)]
gnu: hwloc@1: Update to 1.11.12.

* gnu/packages/mpi.scm (hwloc): Update to 1.11.12.

5 years agognu: VTK: Update to 8.2.0.
Marius Bakke [Wed, 30 Jan 2019 19:59:22 +0000 (20:59 +0100)]
gnu: VTK: Update to 8.2.0.

* gnu/packages/image-processing.scm (vtk): Update to 8.2.0.

5 years agognu: VTK: Use HTTPS URLs.
Marius Bakke [Wed, 30 Jan 2019 19:58:54 +0000 (20:58 +0100)]
gnu: VTK: Use HTTPS URLs.

* gnu/packages/image-processing.scm (vtk)[source, home-page]: Use HTTPS.

5 years agognu: whois: Update to 5.4.1.
Marius Bakke [Wed, 30 Jan 2019 19:56:58 +0000 (20:56 +0100)]
gnu: whois: Update to 5.4.1.

* gnu/packages/networking.scm (whois): Update to 5.4.1.

5 years agognu: json-modern-cxx: Fetch from git.
Marius Bakke [Wed, 30 Jan 2019 19:08:52 +0000 (20:08 +0100)]
gnu: json-modern-cxx: Fetch from git.

* gnu/packages/cpp.scm (json-modern-cxx)[source]: Use GIT-FETCH.
[source](snippet): End on #t.

5 years agognu: httpd: Update to 2.4.38.
Marius Bakke [Tue, 29 Jan 2019 15:02:42 +0000 (16:02 +0100)]
gnu: httpd: Update to 2.4.38.

* gnu/packages/web.scm (httpd): Update to 2.4.38.

5 years agognu: libwebp: Update to 1.0.2.
Marius Bakke [Tue, 29 Jan 2019 14:59:52 +0000 (15:59 +0100)]
gnu: libwebp: Update to 1.0.2.

* gnu/packages/image.scm (libwebp): Update to 1.0.2.

5 years agognu: p11-kit: Update to 0.23.15.
Marius Bakke [Mon, 28 Jan 2019 19:36:21 +0000 (20:36 +0100)]
gnu: p11-kit: Update to 0.23.15.

* gnu/packages/patches/p11-kit-jks-timestamps.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/tls.scm (p11-kit): Update to 0.23.15.
[source](patches): New field.

5 years agognu: i3-wm: Update to 4.16.1.
Marius Bakke [Mon, 28 Jan 2019 19:32:51 +0000 (20:32 +0100)]
gnu: i3-wm: Update to 4.16.1.

* gnu/packages/wm.scm (i3-wm): Update to 4.16.1.

5 years agognu: msmtp: Update to 1.8.2.
Marius Bakke [Tue, 15 Jan 2019 13:49:14 +0000 (14:49 +0100)]
gnu: msmtp: Update to 1.8.2.

* gnu/packages/mail.scm (msmtp): Update to 1.8.2.

5 years agognu: tcc: Fix building on armhf-linux.
Efraim Flashner [Thu, 31 Jan 2019 16:39:06 +0000 (18:39 +0200)]
gnu: tcc: Fix building on armhf-linux.

* gnu/packages/c.scm (tcc)[arguments]: Add 'configure-flag to set the
triplet when building for armhf-linux.

5 years agognu: tcc: Mark aarch64-linux as supported.
Efraim Flashner [Thu, 31 Jan 2019 14:41:24 +0000 (16:41 +0200)]
gnu: tcc: Mark aarch64-linux as supported.

* gnu/packages/c.scm (tcc)[supported-systems]: Remove aarch64.

5 years agognu: Remove xboing.
Ricardo Wurmus [Thu, 31 Jan 2019 15:29:53 +0000 (16:29 +0100)]
gnu: Remove xboing.

* gnu/packages/games.scm (xboing): Remove variable.

5 years agognu: guile-hall: Wrap with guile-config.
Ricardo Wurmus [Thu, 31 Jan 2019 15:21:43 +0000 (16:21 +0100)]
gnu: guile-hall: Wrap with guile-config.

* gnu/packages/guile-xyz.scm (guile-hall)[arguments]: Extend
"hall-wrap-binaries" phase to include guile-config in the load path.

5 years agognu: Add python-cypari2 and python2-cypari2.
Andreas Enge [Thu, 31 Jan 2019 13:55:22 +0000 (14:55 +0100)]
gnu: Add python-cypari2 and python2-cypari2.

* gnu/packages/sagemath.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register new module.

5 years agognu: QEMU: Fix CVE-2018-16872 and CVE-2019-6778.
Leo Famulari [Tue, 29 Jan 2019 19:57:29 +0000 (14:57 -0500)]
gnu: QEMU: Fix CVE-2018-16872 and CVE-2019-6778.

* gnu/packages/patches/qemu-CVE-2018-16872.patch,
gnu/packages/patches/qemu-CVE-2019-6778.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/virtualization.scm (qemu)[source]: Use them.

5 years agognu: rss-bridge: Update to 2019-01-13.
Arun Isaac [Thu, 31 Jan 2019 10:38:17 +0000 (16:08 +0530)]
gnu: rss-bridge: Update to 2019-01-13.

* gnu/packages/web.scm (rss-bridge): Update to 2019-01-13.
[source]: Use git-fetch.
[native-inputs]: Remove gzip and tar.

5 years agognu: scdoc: Update to 1.8.1.
Rutger Helling [Thu, 31 Jan 2019 09:08:19 +0000 (10:08 +0100)]
gnu: scdoc: Update to 1.8.1.

* gnu/packages/man.scm (scdoc): Update to 1.8.1.

5 years agognu: mame: Update to 0.206.
Nicolas Goaziou [Wed, 30 Jan 2019 21:59:44 +0000 (22:59 +0100)]
gnu: mame: Update to 0.206.

* gnu/packages/emulators.scm (mame): Update to 0.206.

5 years agognu: Add lhasa.
Kei Kebreau [Sat, 26 Jan 2019 16:12:07 +0000 (11:12 -0500)]
gnu: Add lhasa.

* gnu/packages/compression.scm (lhasa): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
5 years agognu: star: Update to 2.7.0a.
Ricardo Wurmus [Wed, 30 Jan 2019 14:43:56 +0000 (15:43 +0100)]
gnu: star: Update to 2.7.0a.

* gnu/packages/bioinformatics.scm (star): Update to 2.7.0a.

5 years agognu: icecat: Update to 60.5.0-guix1 [security-fixes].
Mark H Weaver [Wed, 30 Jan 2019 02:21:20 +0000 (21:21 -0500)]
gnu: icecat: Update to 60.5.0-guix1 [security-fixes].

Includes fixes for CVE-2018-18500, CVE-2018-18501, and CVE-2018-18505.

* gnu/packages/gnuzilla.scm (icecat): Update to 60.5.0-guix1.
[version]: Use %icecat-version.
[source]: Inherit from 'icecat-source'.  Remove obsolete patches.
* gnu/packages/patches/icecat-avoid-bundled-libraries.patch,
gnu/packages/patches/icecat-use-system-graphite2+harfbuzz.patch,
gnu/packages/patches/icecat-use-system-media-libs.patch: Adapt to 60.5.0.

5 years agognu: icecat: Add icecat-source.
Mark H Weaver [Wed, 30 Jan 2019 02:15:36 +0000 (21:15 -0500)]
gnu: icecat: Add icecat-source.

* gnu/packages/gnuzilla.scm (computed-origin-method): New variable.
(%icecat-version, icecat-source): New variables.
* gnu/packages/patches/icecat-makeicecat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

5 years agognu: clang-runtime@3.5: Fix compilation on glibc 2.28.
Ludovic Courtès [Tue, 29 Jan 2019 22:28:55 +0000 (23:28 +0100)]
gnu: clang-runtime@3.5: Fix compilation on glibc 2.28.

Reported by zimoun <zimon.toutoune@gmail.com>.

* gnu/packages/llvm.scm (clang-runtime-3.5): Add
"clang-3.5-libsanitizer-ustat-fix.patch".

5 years agognu: guile-commonmark: Update to 0.1.2.
Ludovic Courtès [Tue, 29 Jan 2019 21:49:58 +0000 (22:49 +0100)]
gnu: guile-commonmark: Update to 0.1.2.

* gnu/packages/guile-xyz.scm (guile-commonmark): Update to 0.1.2.
[source](modules, snippet): Remove.

5 years agognu: guile-git: Update to 0.2.0.
Ludovic Courtès [Tue, 29 Jan 2019 21:44:32 +0000 (22:44 +0100)]
gnu: guile-git: Update to 0.2.0.

* gnu/packages/guile.scm (guile-git): Update to 0.2.0.

5 years agognu: Mutt: Update to 1.11.2.
Leo Famulari [Tue, 29 Jan 2019 20:50:54 +0000 (15:50 -0500)]
gnu: Mutt: Update to 1.11.2.

* gnu/packages/mail.scm (mutt): Update to 1.11.2.

5 years agognu: Add texlive-latex-beamer.
Ricardo Wurmus [Tue, 29 Jan 2019 16:18:23 +0000 (17:18 +0100)]
gnu: Add texlive-latex-beamer.

* gnu/packages/tex.scm (texlive-latex-beamer): New variable.

5 years agognu: texlive-latex-seminar: Copy files to output.
Ricardo Wurmus [Tue, 29 Jan 2019 13:05:47 +0000 (14:05 +0100)]
gnu: texlive-latex-seminar: Copy files to output.

* gnu/packages/tex.scm (texlive-latex-seminar)[build-system]: Use
trivial-build-system.
[arguments]: Copy files to output.

5 years agopull: Default to verbosity level 1.
Ludovic Courtès [Sun, 27 Jan 2019 17:16:25 +0000 (18:16 +0100)]
pull: Default to verbosity level 1.

* guix/scripts/pull.scm (%default-options): Change 'verbosity to 1.

5 years agoself: Produce progress reports compatible with (guix status).
Ludovic Courtès [Sun, 27 Jan 2019 17:15:05 +0000 (18:15 +0100)]
self: Produce progress reports compatible with (guix status).

* guix/self.scm (compiled-modules)[build](report-load)
(report-compilation): Write "[M/N]" progress reports.
Use line-buffering.

5 years agostatus: Print a progress bar for on-going builds when possible.
Ludovic Courtès [Sun, 27 Jan 2019 21:44:34 +0000 (22:44 +0100)]
status: Print a progress bar for on-going builds when possible.

* guix/status.scm (print-build-event)[report-build-progress]: New
procedure.
[print-log-line]: Add ID parameter.  Call 'report-build-progress' when
appropriate.
Adjust callers.

5 years agostatus: Keep track of build completion as reported by build tools.
Ludovic Courtès [Sun, 27 Jan 2019 21:33:16 +0000 (22:33 +0100)]
status: Keep track of build completion as reported by build tools.

* guix/status.scm (<build>)[completion]: New field.
(build): Add #:completion parameter.
(%percentage-line-rx, %fraction-line-rx): New variables.
(update-build): New procedure.
(compute-status): Add 'build-log' case.
* tests/status.scm ("compute-status, build completion"): New test.

5 years agostatus: Record more information about builds.
Ludovic Courtès [Sun, 27 Jan 2019 21:10:13 +0000 (22:10 +0100)]
status: Record more information about builds.

* guix/status.scm (<build>): New record type.
(build, matching-build): New procedures.
(compute-status): Adjust to manipulate <build> records instead of
derivation file names in 'build-status-builds-completed' and
'build-status-building'.
(build-event-output-port)[process-line]: Use 'string-split' to preserve
spaces.
* tests/status.scm ("compute-status, builds + substitutes")
("compute-status, missing events"): Adjust to expect <build> records.
Produce complete "build-started" events.
("compute-status, multiplexed build output"): Likewise, and remove
"bar.drv" from 'builds-completed'.

5 years agochannels: Do not offload package cache derivation.
Ludovic Courtès [Tue, 29 Jan 2019 10:58:50 +0000 (11:58 +0100)]
channels: Do not offload package cache derivation.

* guix/channels.scm (package-cache-file): Pass #:local-build? to
'gexp->derivation-in-inferior'.

5 years agognu: clojure: Update to 1.10.0.
Mathieu Lirzin [Thu, 24 Jan 2019 12:48:31 +0000 (13:48 +0100)]
gnu: clojure: Update to 1.10.0.

* gnu/packages/clojure.scm (clojure): Update to 1.10.0.
[source]: Use 'git-fetch'.

5 years agognu: kitty: Update to 0.13.3.
Rutger Helling [Tue, 29 Jan 2019 09:05:00 +0000 (10:05 +0100)]
gnu: kitty: Update to 0.13.3.

* gnu/packages/terminals.scm (kitty): Update to 0.13.3.
[inputs]: Replace python2-pygments with python-pygments. Add wayland.
[arguments]: Add 'hard-code-libegl phase.

5 years agognu: x265: Update to 3.0.
Efraim Flashner [Tue, 29 Jan 2019 07:47:25 +0000 (09:47 +0200)]
gnu: x265: Update to 3.0.

* gnu/packages/video.scm (x265): Update to 3.0.
[source]: Remove patch.
* gnu/packages/patches/x265-detect512-all-arches.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.

5 years agognu: guix: Update to 4bddd12.
Ludovic Courtès [Mon, 28 Jan 2019 22:51:39 +0000 (23:51 +0100)]
gnu: guix: Update to 4bddd12.

* gnu/packages/package-management.scm (guix): Update to 4bddd12.

5 years agognu: Add missing file.
Ricardo Wurmus [Mon, 28 Jan 2019 22:27:41 +0000 (23:27 +0100)]
gnu: Add missing file.

* gnu/local.mk (GNU_SYSTEM_MODULES): Add gnu/installer/newt/user.scm.

5 years agognu: Add openjdk 11.
Gábor Boskovits [Mon, 28 Jan 2019 07:50:30 +0000 (08:50 +0100)]
gnu: Add openjdk 11.

* gnu/packages/java.scm (openjdk11): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
5 years agognu: fish: Use fish-foreign-env to source /etc/profile.
Meiyo Peng [Sun, 20 Jan 2019 13:42:15 +0000 (21:42 +0800)]
gnu: fish: Use fish-foreign-env to source /etc/profile.

* gnu/packages/shells.scm (fish): Use fish-foreign-env to source /etc/profile
  when user logs in.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
5 years agognu: Add fish-foreign-env.
Meiyo Peng [Sun, 20 Jan 2019 13:41:21 +0000 (21:41 +0800)]
gnu: Add fish-foreign-env.

* gnu/packages/shells.scm (fish-foreign-env): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
5 years agognu: fish: Update to 3.0.0.
Meiyo Peng [Sun, 6 Jan 2019 14:11:36 +0000 (22:11 +0800)]
gnu: fish: Update to 3.0.0.

* gnu/packages/shells.scm (fish): Update to 3.0.0.
  [source]: Remove dead URL.
  [inputs]: Remove bc.  Replace python-wrapper with python.
  [arguments]: Remove configure-flags.  Enable fish to source
  /etc/fish/config.fish.  Enable completions, functions and configurations
  in user's and system's guix profiles.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
5 years agopull: Don't trigger 'hash guix' hint needlessly.
Ludovic Courtès [Mon, 28 Jan 2019 22:03:38 +0000 (23:03 +0100)]
pull: Don't trigger 'hash guix' hint needlessly.

Previously if ~/.config/guix/current/bin was in $PATH, we'd still
suggest to run 'hash guix' because we'd compare (which "guix") against
/var/guix/profiles/per-user/….

* guix/scripts/pull.scm (build-and-install): Check whether (which
"guix") matches PROFILE or its user-friendly variant.

5 years agochannels: Turn off deprecation warnings when loading 'build-self.scm'.
Ludovic Courtès [Mon, 28 Jan 2019 21:42:48 +0000 (22:42 +0100)]
channels: Turn off deprecation warnings when loading 'build-self.scm'.

* guix/channels.scm (build-from-source): Parameterize
DEPRECATION-WARNING-PORT when loading SCRIPT.

5 years agoupstream: Temporarily skip failing test.
Ludovic Courtès [Mon, 28 Jan 2019 21:20:20 +0000 (22:20 +0100)]
upstream: Temporarily skip failing test.

* tests/upstream.scm ("coalesce-sources same version"): Skip.

5 years agognu: youtube-dl: Update to 2019.01.27.
Ludovic Courtès [Mon, 28 Jan 2019 21:04:06 +0000 (22:04 +0100)]
gnu: youtube-dl: Update to 2019.01.27.

* gnu/packages/video.scm (youtube-dl): Update to 2019.01.27.

5 years agognu: fastcap: Fix build and use INVOKE.
Ricardo Wurmus [Mon, 28 Jan 2019 19:30:20 +0000 (20:30 +0100)]
gnu: fastcap: Fix build and use INVOKE.

* gnu/packages/engineering.scm (fastcap)[native-inputs]: Replace texlive-tiny
with a texlive-union including texlive-fonts-amsfonts.
[arguments]: Use INVOKE in build phases.

5 years agognu: scons: Update to 3.0.3.
Ricardo Wurmus [Mon, 28 Jan 2019 19:09:51 +0000 (20:09 +0100)]
gnu: scons: Update to 3.0.3.

Fixes <https://bugs.gnu.org/34236>.

* gnu/packages/python-xyz.scm (scons): Update to 3.0.3.
[arguments]: Add "bootstrap" phase.

5 years agognu: r-genomicfeatures: Update to 1.34.2.
Ricardo Wurmus [Mon, 28 Jan 2019 15:24:25 +0000 (16:24 +0100)]
gnu: r-genomicfeatures: Update to 1.34.2.

* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.2.

5 years agognu: r-variantannotation: Update to 1.28.10.
Ricardo Wurmus [Mon, 28 Jan 2019 15:24:14 +0000 (16:24 +0100)]
gnu: r-variantannotation: Update to 1.28.10.

* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.10.

5 years agognu: r-rmpfr: Update to 0.7-2.
Ricardo Wurmus [Mon, 28 Jan 2019 15:21:10 +0000 (16:21 +0100)]
gnu: r-rmpfr: Update to 0.7-2.

* gnu/packages/cran.scm (r-rmpfr): Update to 0.7-2.

5 years agognu: r-waveslim: Update to 1.7.5.1.
Ricardo Wurmus [Mon, 28 Jan 2019 15:21:00 +0000 (16:21 +0100)]
gnu: r-waveslim: Update to 1.7.5.1.

* gnu/packages/cran.scm (r-waveslim): Update to 1.7.5.1.

5 years agognu: r-activity: Update to 1.2.
Ricardo Wurmus [Mon, 28 Jan 2019 15:20:46 +0000 (16:20 +0100)]
gnu: r-activity: Update to 1.2.

* gnu/packages/cran.scm (r-activity): Update to 1.2.
[propagated-inputs]: Remove r-overlap.

5 years agognu: r-emmeans: Update to 1.3.2.
Ricardo Wurmus [Mon, 28 Jan 2019 15:20:38 +0000 (16:20 +0100)]
gnu: r-emmeans: Update to 1.3.2.

* gnu/packages/cran.scm (r-emmeans): Update to 1.3.2.

5 years agognu: r-th-data: Update to 1.0-10.
Ricardo Wurmus [Mon, 28 Jan 2019 15:20:28 +0000 (16:20 +0100)]
gnu: r-th-data: Update to 1.0-10.

* gnu/packages/cran.scm (r-th-data): Update to 1.0-10.

5 years agognu: r-acceptancesampling: Update to 1.0-6.
Ricardo Wurmus [Mon, 28 Jan 2019 15:20:19 +0000 (16:20 +0100)]
gnu: r-acceptancesampling: Update to 1.0-6.

* gnu/packages/cran.scm (r-acceptancesampling): Update to 1.0-6.

5 years agognu: r-vioplot: Update to 0.3.0.
Ricardo Wurmus [Mon, 28 Jan 2019 15:20:04 +0000 (16:20 +0100)]
gnu: r-vioplot: Update to 0.3.0.

* gnu/packages/cran.scm (r-vioplot): Update to 0.3.0.
[propagated-inputs]: Add r-zoo.

5 years agognu: r-jomo: Update to 2.6-6.
Ricardo Wurmus [Mon, 28 Jan 2019 15:19:55 +0000 (16:19 +0100)]
gnu: r-jomo: Update to 2.6-6.

* gnu/packages/cran.scm (r-jomo): Update to 2.6-6.