jackhill/guix/guix.git
5 years agognu: Add texlive-latex-pdfx.
Ricardo Wurmus [Fri, 8 Mar 2019 20:49:25 +0000 (21:49 +0100)]
gnu: Add texlive-latex-pdfx.

* gnu/packages/tex.scm (texlive-latex-pdfx): New variable.

5 years agognu: Add texlive-latex-xmpincl.
Ricardo Wurmus [Fri, 8 Mar 2019 20:48:19 +0000 (21:48 +0100)]
gnu: Add texlive-latex-xmpincl.

* gnu/packages/tex.scm (texlive-latex-xmpincl): New variable.

5 years agognu: Add translate2geda.
Ricardo Wurmus [Fri, 8 Mar 2019 20:45:29 +0000 (21:45 +0100)]
gnu: Add translate2geda.

* gnu/packages/engineering.scm (translate2geda): New variable.

5 years agognu: Add rkrlv2.
Ricardo Wurmus [Fri, 8 Mar 2019 19:59:37 +0000 (20:59 +0100)]
gnu: Add rkrlv2.

* gnu/packages/music.scm (rkrlv2): New variable.

5 years agognu: fc-host-tools: Update to 10.
Danny Milosavljevic [Fri, 8 Mar 2019 18:33:04 +0000 (19:33 +0100)]
gnu: fc-host-tools: Update to 10.

* gnu/packages/embedded.scm (fc-host-tools): Update to 10.
[arguments]<:make-flags>: Change INSTBIN to INSTALL_PREFIX.

5 years agognu: crawl: Find all the included headers.
Efraim Flashner [Fri, 8 Mar 2019 13:36:31 +0000 (15:36 +0200)]
gnu: crawl: Find all the included headers.

* gnu/packages/games.scm (crawl)[arguments]: Add a custom phase to
change the path for some headers.

5 years agognu: crawl: Don't assume system architecture.
Efraim Flashner [Fri, 8 Mar 2019 13:27:29 +0000 (15:27 +0200)]
gnu: crawl: Don't assume system architecture.

This allows crawl to build on non-Intel architectures.

* gnu/packages/games.scm (crawl)[arguments]: Add a custom phase to
remove x86* specific CFLAGS.

5 years agognu: crawl: Build with python3-wrapper.
Efraim Flashner [Fri, 8 Mar 2019 13:25:57 +0000 (15:25 +0200)]
gnu: crawl: Build with python3-wrapper.

* gnu/packages/games.scm (crawl)[native-inputs replace python with
python-wrapper.
[arguments]: Remove custom 'patch-python phase.

5 years agochannels: Do not fail when the inferior lacks 'guix repl'.
Ludovic Courtès [Fri, 8 Mar 2019 11:25:25 +0000 (12:25 +0100)]
channels: Do not fail when the inferior lacks 'guix repl'.

Fixes <https://bugs.gnu.org/34637>.
Reported by Martin Flack <martin.flack@gmail.com>.

Previously we'd fail to build the package cache for old versions of Guix
that lack 'guix repl'.  Now we simply ignore the issue and keep going
without a cache.

* guix/inferior.scm (gexp->derivation-in-inferior): Add
 #:silent-failure? and honor it.
[drop-extra-keyword]: New procedure.
Use it.
* guix/channels.scm (package-cache-file): Pass #:silent-failure? #t.

5 years agodoc: Document references.
Ludovic Courtès [Fri, 8 Mar 2019 10:47:00 +0000 (11:47 +0100)]
doc: Document references.

Suggested by "pelzflorian (Florian Pelz)" <pelzflorian@pelzflorian.de>.
Fixes <https://bugs.gnu.org/34574>.

* doc/guix.texi (Derivations): Document references.

5 years agognu: u-boot: Remove openssl input.
Vagrant Cascadian [Thu, 7 Mar 2019 21:50:58 +0000 (21:50 +0000)]
gnu: u-boot: Remove openssl input.

Fixes <https://bugs.gnu.org/34717>.

* gnu/packages/bootloaders (u-boot): Remove openssl from native-inputs.
  (u-boot-tools): Disable FIT_SIGNATURES in tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
5 years agognu: flatpak: Add more dependencies.
Rutger Helling [Fri, 8 Mar 2019 10:48:18 +0000 (11:48 +0100)]
gnu: flatpak: Add more dependencies.

* gnu/packages/package-management.scm (flatpak)[propagated-inputs]: Add
"glib-networking", "gnupg" and "gsettings-desktop-schemas".

5 years agognu: r-genelendatabase: Update to 1.18.0.
Ricardo Wurmus [Fri, 8 Mar 2019 08:30:00 +0000 (09:30 +0100)]
gnu: r-genelendatabase: Update to 1.18.0.

* gnu/packages/bioconductor.scm (r-genelendatabase): Update to 1.18.0.

5 years agognu: r-mzr: Update to 2.16.2.
Ricardo Wurmus [Fri, 8 Mar 2019 08:13:19 +0000 (09:13 +0100)]
gnu: r-mzr: Update to 2.16.2.

* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.16.2.
[inputs]: Replace "boost" with "boost-for-mysql".

5 years agognu: r-gviz: Update to 1.26.5.
Ricardo Wurmus [Thu, 7 Mar 2019 23:40:10 +0000 (00:40 +0100)]
gnu: r-gviz: Update to 1.26.5.

* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.26.5.

5 years agognu: r-ensembldb: Update to 2.6.7.
Ricardo Wurmus [Thu, 7 Mar 2019 23:40:03 +0000 (00:40 +0100)]
gnu: r-ensembldb: Update to 2.6.7.

* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.7.

5 years agognu: r-annotationhub: Update to 2.14.4.
Ricardo Wurmus [Thu, 7 Mar 2019 23:39:53 +0000 (00:39 +0100)]
gnu: r-annotationhub: Update to 2.14.4.

* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.14.4.

5 years agognu: r-rhtslib: Update to 1.14.1.
Ricardo Wurmus [Thu, 7 Mar 2019 23:39:39 +0000 (00:39 +0100)]
gnu: r-rhtslib: Update to 1.14.1.

* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.14.1.

5 years agognu: r-genomicfeatures: Update to 1.34.4.
Ricardo Wurmus [Thu, 7 Mar 2019 23:39:32 +0000 (00:39 +0100)]
gnu: r-genomicfeatures: Update to 1.34.4.

* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.4.

5 years agognu: r-rtracklayer: Update to 1.42.2.
Ricardo Wurmus [Thu, 7 Mar 2019 23:39:26 +0000 (00:39 +0100)]
gnu: r-rtracklayer: Update to 1.42.2.

* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.42.2.

5 years agognu: r-rsamtools: Update to 1.34.1.
Ricardo Wurmus [Thu, 7 Mar 2019 23:39:20 +0000 (00:39 +0100)]
gnu: r-rsamtools: Update to 1.34.1.

* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.34.1.

5 years agognu: r-biocparallel: Update to 1.16.6.
Ricardo Wurmus [Thu, 7 Mar 2019 23:39:13 +0000 (00:39 +0100)]
gnu: r-biocparallel: Update to 1.16.6.

* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.16.6.

5 years agognu: r-variantannotation: Update to 1.28.11.
Ricardo Wurmus [Thu, 7 Mar 2019 23:39:07 +0000 (00:39 +0100)]
gnu: r-variantannotation: Update to 1.28.11.

* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.11.

5 years agognu: r-genomeinfodb: Update to 1.18.2.
Ricardo Wurmus [Thu, 7 Mar 2019 23:38:59 +0000 (00:38 +0100)]
gnu: r-genomeinfodb: Update to 1.18.2.

* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.18.2.

5 years agognu: r-dexseq: Update to 1.28.2.
Ricardo Wurmus [Thu, 7 Mar 2019 23:38:46 +0000 (00:38 +0100)]
gnu: r-dexseq: Update to 1.28.2.

* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.28.2.

5 years agognu: man-pages: Update to 5.00.
Tobias Geerinckx-Rice [Thu, 7 Mar 2019 15:40:33 +0000 (16:40 +0100)]
gnu: man-pages: Update to 5.00.

* gnu/packages/man.scm (man-pages): Update to 5.00.
[source]: Re-format.

5 years agognu: dovecot: Update to 2.3.5.
Tobias Geerinckx-Rice [Fri, 8 Mar 2019 00:09:29 +0000 (01:09 +0100)]
gnu: dovecot: Update to 2.3.5.

* gnu/packages/mail.scm (dovecot): Update to 2.3.5.
[arguments]: Patch more tests in ‘patch-file-names’ phase, renamed from
‘patch-other-file-names’.

5 years agognu: dovecot: Don't use NAME in source URI.
Tobias Geerinckx-Rice [Thu, 7 Mar 2019 23:28:35 +0000 (00:28 +0100)]
gnu: dovecot: Don't use NAME in source URI.

* gnu/packages/mail.scm (dovecot)[source]: Hard-code NAME.

5 years agoetc: snippets: Prefill package name.
Ricardo Wurmus [Thu, 7 Mar 2019 23:17:30 +0000 (00:17 +0100)]
etc: snippets: Prefill package name.

* etc/snippets/text-mode/guix-commit-message-add-package: Extract package
name from diff.

5 years agognu: Add mruby.
Ricardo Wurmus [Thu, 7 Mar 2019 23:04:33 +0000 (00:04 +0100)]
gnu: Add mruby.

* gnu/packages/ruby.scm (mruby): New variable.

5 years agoetc: snippets: Prefill package name and version.
Ricardo Wurmus [Thu, 7 Mar 2019 22:55:24 +0000 (23:55 +0100)]
etc: snippets: Prefill package name and version.

* etc/snippets/text-mode/guix-commit-message-update-package: Extract package
name and version from git diff output.

5 years agognu: r-ggmap: Update to 3.0.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:51:00 +0000 (23:51 +0100)]
gnu: r-ggmap: Update to 3.0.0.

* gnu/packages/cran.scm (r-ggmap): Update to 3.0.0.
[propagated-inputs]: Add r-bitops, r-dplyr, r-glue, r-httr, r-magrittr,
r-purrr, r-stringr, r-tibble, and r-tidyr; remove r-geosphere, r-mapproj,
r-proto, and r-reshape2.

5 years agognu: r-readxl: Update to 1.3.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:50:51 +0000 (23:50 +0100)]
gnu: r-readxl: Update to 1.3.0.

* gnu/packages/cran.scm (r-readxl): Update to 1.3.0.

5 years agognu: r-sys: Update to 3.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:50:39 +0000 (23:50 +0100)]
gnu: r-sys: Update to 3.0.

* gnu/packages/cran.scm (r-sys): Update to 3.0.

5 years agognu: r-servr: Update to 0.13.
Ricardo Wurmus [Thu, 7 Mar 2019 22:50:28 +0000 (23:50 +0100)]
gnu: r-servr: Update to 0.13.

* gnu/packages/cran.scm (r-servr): Update to 0.13.

5 years agognu: r-flextable: Update to 0.5.1.
Ricardo Wurmus [Thu, 7 Mar 2019 22:49:45 +0000 (23:49 +0100)]
gnu: r-flextable: Update to 0.5.1.

* gnu/packages/cran.scm (r-flextable): Update to 0.5.1.
[propagated-inputs]: Add r-data-table, r-magick, and r-rlang; remove r-r6 and
r-stringr.

5 years agognu: r-proxy: Update to 0.4-23.
Ricardo Wurmus [Thu, 7 Mar 2019 22:49:28 +0000 (23:49 +0100)]
gnu: r-proxy: Update to 0.4-23.

* gnu/packages/cran.scm (r-proxy): Update to 0.4-23.

5 years agognu: r-haven: Update to 2.1.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:49:16 +0000 (23:49 +0100)]
gnu: r-haven: Update to 2.1.0.

* gnu/packages/cran.scm (r-haven): Update to 2.1.0.

5 years agognu: r-emdbook: Update to 1.3.11.
Ricardo Wurmus [Thu, 7 Mar 2019 22:49:09 +0000 (23:49 +0100)]
gnu: r-emdbook: Update to 1.3.11.

* gnu/packages/cran.scm (r-emdbook): Update to 1.3.11.

5 years agognu: r-rmysql: Update to 0.10.17.
Ricardo Wurmus [Thu, 7 Mar 2019 22:48:54 +0000 (23:48 +0100)]
gnu: r-rmysql: Update to 0.10.17.

* gnu/packages/cran.scm (r-rmysql): Update to 0.10.17.
[native-inputs]: Remove pkg-config.

5 years agognu: r-gower: Update to 0.2.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:48:40 +0000 (23:48 +0100)]
gnu: r-gower: Update to 0.2.0.

* gnu/packages/cran.scm (r-gower): Update to 0.2.0.
[native-inputs]: Remove r-knitr.

5 years agognu: r-ggsignif: Update to 0.5.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:48:32 +0000 (23:48 +0100)]
gnu: r-ggsignif: Update to 0.5.0.

* gnu/packages/cran.scm (r-ggsignif): Update to 0.5.0.

5 years agognu: r-jomo: Update to 2.6-7.
Ricardo Wurmus [Thu, 7 Mar 2019 22:48:23 +0000 (23:48 +0100)]
gnu: r-jomo: Update to 2.6-7.

* gnu/packages/cran.scm (r-jomo): Update to 2.6-7.

5 years agognu: r-mice: Update to 3.4.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:48:16 +0000 (23:48 +0100)]
gnu: r-mice: Update to 3.4.0.

* gnu/packages/cran.scm (r-mice): Update to 3.4.0.

5 years agognu: r-xfun: Update to 0.5.
Ricardo Wurmus [Thu, 7 Mar 2019 22:48:09 +0000 (23:48 +0100)]
gnu: r-xfun: Update to 0.5.

* gnu/packages/cran.scm (r-xfun): Update to 0.5.

5 years agognu: r-metap: Update to 1.1.
Ricardo Wurmus [Thu, 7 Mar 2019 22:48:02 +0000 (23:48 +0100)]
gnu: r-metap: Update to 1.1.

* gnu/packages/cran.scm (r-metap): Update to 1.1.

5 years agognu: r-ifultools: Update to 2.0-5.
Ricardo Wurmus [Thu, 7 Mar 2019 22:47:53 +0000 (23:47 +0100)]
gnu: r-ifultools: Update to 2.0-5.

* gnu/packages/cran.scm (r-ifultools): Update to 2.0-5.

5 years agognu: r-radiant-data: Update to 0.9.9.
Ricardo Wurmus [Thu, 7 Mar 2019 22:47:34 +0000 (23:47 +0100)]
gnu: r-radiant-data: Update to 0.9.9.

* gnu/packages/cran.scm (r-radiant-data): Update to 0.9.9.
[propagated-inputs]: Add r-stringi; remove r-summarytools.

5 years agognu: r-later: Update to 0.8.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:47:12 +0000 (23:47 +0100)]
gnu: r-later: Update to 0.8.0.

* gnu/packages/cran.scm (r-later): Update to 0.8.0.

5 years agognu: r-vim: Update to 4.8.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:46:56 +0000 (23:46 +0100)]
gnu: r-vim: Update to 4.8.0.

* gnu/packages/cran.scm (r-vim): Update to 4.8.0.
[propagated-inputs]: Add r-ranger.

5 years agognu: r-fnn: Update to 1.1.3.
Ricardo Wurmus [Thu, 7 Mar 2019 22:46:37 +0000 (23:46 +0100)]
gnu: r-fnn: Update to 1.1.3.

* gnu/packages/cran.scm (r-fnn): Update to 1.1.3.

5 years agognu: r-arules: Update to 1.6-3.
Ricardo Wurmus [Thu, 7 Mar 2019 22:46:26 +0000 (23:46 +0100)]
gnu: r-arules: Update to 1.6-3.

* gnu/packages/cran.scm (r-arules): Update to 1.6-3.

5 years agognu: r-zip: Update to 2.0.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:46:14 +0000 (23:46 +0100)]
gnu: r-zip: Update to 2.0.0.

* gnu/packages/cran.scm (r-zip): Update to 2.0.0.

5 years agognu: r-maptools: Update to 0.9-5.
Ricardo Wurmus [Thu, 7 Mar 2019 22:45:57 +0000 (23:45 +0100)]
gnu: r-maptools: Update to 0.9-5.

* gnu/packages/cran.scm (r-maptools): Update to 0.9-5.

5 years agognu: r-reticulate: Update to 1.11.1.
Ricardo Wurmus [Thu, 7 Mar 2019 22:45:39 +0000 (23:45 +0100)]
gnu: r-reticulate: Update to 1.11.1.

* gnu/packages/cran.scm (r-reticulate): Update to 1.11.1.

5 years agognu: r-officer: Update to 0.3.3.
Ricardo Wurmus [Thu, 7 Mar 2019 22:45:26 +0000 (23:45 +0100)]
gnu: r-officer: Update to 0.3.3.

* gnu/packages/cran.scm (r-officer): Update to 0.3.3.
[propagated-inputs]: Add r-rlang.

5 years agognu: r-prediction: Update to 0.3.6.2.
Ricardo Wurmus [Thu, 7 Mar 2019 22:45:15 +0000 (23:45 +0100)]
gnu: r-prediction: Update to 0.3.6.2.

* gnu/packages/cran.scm (r-prediction): Update to 0.3.6.2.

5 years agognu: r-abjutils: Update to 0.2.3.
Ricardo Wurmus [Thu, 7 Mar 2019 22:44:41 +0000 (23:44 +0100)]
gnu: r-abjutils: Update to 0.2.3.

* gnu/packages/cran.scm (r-abjutils): Update to 0.2.3.
[propagated-inputs]: Add r-furrr, r-future, r-readr, and r-rlang; remove
r-plyr.

5 years agognu: r-slam: Update to 0.1-45.
Ricardo Wurmus [Thu, 7 Mar 2019 22:44:27 +0000 (23:44 +0100)]
gnu: r-slam: Update to 0.1-45.

* gnu/packages/cran.scm (r-slam): Update to 0.1-45.

5 years agognu: r-hash: Update to 2.2.6.1.
Ricardo Wurmus [Thu, 7 Mar 2019 22:44:12 +0000 (23:44 +0100)]
gnu: r-hash: Update to 2.2.6.1.

* gnu/packages/cran.scm (r-hash): Update to 2.2.6.1.

5 years agognu: r-dvmisc: Update to 1.1.3.
Ricardo Wurmus [Thu, 7 Mar 2019 22:43:19 +0000 (23:43 +0100)]
gnu: r-dvmisc: Update to 1.1.3.

* gnu/packages/cran.scm (r-dvmisc): Update to 1.1.3.
[propagated-inputs]: Add r-cubature, r-data-table, r-dplyr, r-ggplot2,
r-mvtnorm, r-pracma, r-purrr, and r-survey.

5 years agognu: r-summarytools: Update to 0.9.2.
Ricardo Wurmus [Thu, 7 Mar 2019 22:42:43 +0000 (23:42 +0100)]
gnu: r-summarytools: Update to 0.9.2.

* gnu/packages/cran.scm (r-summarytools): Update to 0.9.2.
[propagated-inputs]: Add r-checkmate, r-dplyr, r-magick, and r-tidyr.

5 years agognu: r-multcomp: Update to 1.4-10.
Ricardo Wurmus [Thu, 7 Mar 2019 22:42:28 +0000 (23:42 +0100)]
gnu: r-multcomp: Update to 1.4-10.

* gnu/packages/cran.scm (r-multcomp): Update to 1.4-10.

5 years agognu: r-emmeans: Update to 1.3.3.
Ricardo Wurmus [Thu, 7 Mar 2019 22:42:10 +0000 (23:42 +0100)]
gnu: r-emmeans: Update to 1.3.3.

* gnu/packages/cran.scm (r-emmeans): Update to 1.3.3.
[propagated-inputs]: Add r-numderiv.

5 years agognu: r-afex: Update to 0.23-0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:41:57 +0000 (23:41 +0100)]
gnu: r-afex: Update to 0.23-0.

* gnu/packages/cran.scm (r-afex): Update to 0.23-0.

5 years agognu: r-lmertest: Update to 3.1-0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:41:43 +0000 (23:41 +0100)]
gnu: r-lmertest: Update to 3.1-0.

* gnu/packages/cran.scm (r-lmertest): Update to 3.1-0.

5 years agognu: r-ks: Update to 1.11.4.
Ricardo Wurmus [Thu, 7 Mar 2019 22:41:21 +0000 (23:41 +0100)]
gnu: r-ks: Update to 1.11.4.

* gnu/packages/cran.scm (r-ks): Update to 1.11.4.
[propagated-inputs]: Remove r-misc3d.

5 years agognu: r-tidytree: Update to 0.2.4.
Ricardo Wurmus [Thu, 7 Mar 2019 22:40:52 +0000 (23:40 +0100)]
gnu: r-tidytree: Update to 0.2.4.

* gnu/packages/cran.scm (r-tidytree): Update to 0.2.4.

5 years agognu: r-bigrquery: Update to 1.1.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:40:26 +0000 (23:40 +0100)]
gnu: r-bigrquery: Update to 1.1.0.

* gnu/packages/cran.scm (r-bigrquery): Update to 1.1.0.
[propagated-inputs]: Add r-bit64.

5 years agognu: r-gmp: Update to 0.5-13.4.
Ricardo Wurmus [Thu, 7 Mar 2019 22:40:09 +0000 (23:40 +0100)]
gnu: r-gmp: Update to 0.5-13.4.

* gnu/packages/cran.scm (r-gmp): Update to 0.5-13.4.

5 years agognu: r-huge: Update to 1.3.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:39:35 +0000 (23:39 +0100)]
gnu: r-huge: Update to 1.3.0.

* gnu/packages/cran.scm (r-huge): Update to 1.3.0.
[propagated-inputs]: Add r-rcpp and r-rcppeigen; remove r-lattice.

5 years agognu: r-igraph: Update to 1.2.4.
Ricardo Wurmus [Thu, 7 Mar 2019 22:39:07 +0000 (23:39 +0100)]
gnu: r-igraph: Update to 1.2.4.

* gnu/packages/graph.scm (r-igraph): Update to 1.2.4.

5 years agognu: r-dplyr: Update to 0.8.0.1.
Ricardo Wurmus [Thu, 7 Mar 2019 22:37:47 +0000 (23:37 +0100)]
gnu: r-dplyr: Update to 0.8.0.1.

* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.0.1.
[native-inputs]: Move r-rcpp and r-bh from here...
[propagated-inputs]: ...to here; remove r-bindrcpp.

5 years agognu: r-lme4: Update to 1.1-21.
Ricardo Wurmus [Thu, 7 Mar 2019 22:36:44 +0000 (23:36 +0100)]
gnu: r-lme4: Update to 1.1-21.

* gnu/packages/statistics.scm (r-lme4): Update to 1.1-21.
[native-inputs]: Move r-rcpp and r-rcppeigen from here...
[propagated-inputs]: ...to here; add r-boot.

5 years agognu: r-forcats: Update to 0.4.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:36:10 +0000 (23:36 +0100)]
gnu: r-forcats: Update to 0.4.0.

* gnu/packages/statistics.scm (r-forcats): Update to 0.4.0.
[propagated-inputs]: Add r-ellipsis.

5 years agognu: r-r6: Update to 2.4.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:35:54 +0000 (23:35 +0100)]
gnu: r-r6: Update to 2.4.0.

* gnu/packages/statistics.scm (r-r6): Update to 2.4.0.

5 years agognu: r-formatr: Update to 1.6.
Ricardo Wurmus [Thu, 7 Mar 2019 22:35:41 +0000 (23:35 +0100)]
gnu: r-formatr: Update to 1.6.

* gnu/packages/statistics.scm (r-formatr): Update to 1.6.

5 years agognu: r-evaluate: Update to 0.13.
Ricardo Wurmus [Thu, 7 Mar 2019 22:35:28 +0000 (23:35 +0100)]
gnu: r-evaluate: Update to 0.13.

* gnu/packages/statistics.scm (r-evaluate): Update to 0.13.

5 years agognu: r-mgcv: Update to 1.8-27.
Ricardo Wurmus [Thu, 7 Mar 2019 22:35:09 +0000 (23:35 +0100)]
gnu: r-mgcv: Update to 1.8-27.

* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-27.

5 years agognu: r-stringi: Update to 1.3.1.
Ricardo Wurmus [Thu, 7 Mar 2019 22:34:57 +0000 (23:34 +0100)]
gnu: r-stringi: Update to 1.3.1.

* gnu/packages/statistics.scm (r-stringi): Update to 1.3.1.

5 years agognu: r-stringr: Update to 1.4.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:34:46 +0000 (23:34 +0100)]
gnu: r-stringr: Update to 1.4.0.

* gnu/packages/statistics.scm (r-stringr): Update to 1.4.0.

5 years agognu: r-ranger: Update to 0.11.2.
Ricardo Wurmus [Thu, 7 Mar 2019 22:34:31 +0000 (23:34 +0100)]
gnu: r-ranger: Update to 0.11.2.

* gnu/packages/statistics.scm (r-ranger): Update to 0.11.2.

5 years agognu: r-openssl: Update to 1.2.2.
Ricardo Wurmus [Thu, 7 Mar 2019 22:34:18 +0000 (23:34 +0100)]
gnu: r-openssl: Update to 1.2.2.

* gnu/packages/statistics.scm (r-openssl): Update to 1.2.2.

5 years agognu: r-catools: Update to 1.17.1.2.
Ricardo Wurmus [Thu, 7 Mar 2019 22:34:04 +0000 (23:34 +0100)]
gnu: r-catools: Update to 1.17.1.2.

* gnu/packages/statistics.scm (r-catools): Update to 1.17.1.2.

5 years agognu: r-xml: Update to 3.98-1.19.
Ricardo Wurmus [Thu, 7 Mar 2019 22:33:51 +0000 (23:33 +0100)]
gnu: r-xml: Update to 3.98-1.19.

* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.19.

5 years agognu: r-flexmix: Update to 2.3-15.
Ricardo Wurmus [Thu, 7 Mar 2019 22:33:34 +0000 (23:33 +0100)]
gnu: r-flexmix: Update to 2.3-15.

* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-15.

5 years agognu: r-irlba: Update to 2.3.3.
Ricardo Wurmus [Thu, 7 Mar 2019 22:33:20 +0000 (23:33 +0100)]
gnu: r-irlba: Update to 2.3.3.

* gnu/packages/statistics.scm (r-irlba): Update to 2.3.3.

5 years agognu: r-registry: Update to 0.5-1.
Ricardo Wurmus [Thu, 7 Mar 2019 22:33:07 +0000 (23:33 +0100)]
gnu: r-registry: Update to 0.5-1.

* gnu/packages/statistics.scm (r-registry): Update to 0.5-1.

5 years agognu: r-r-utils: Update to 2.8.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:32:51 +0000 (23:32 +0100)]
gnu: r-r-utils: Update to 2.8.0.

* gnu/packages/statistics.scm (r-r-utils): Update to 2.8.0.

5 years agognu: r-r-rsp: Update to 0.43.1.
Ricardo Wurmus [Thu, 7 Mar 2019 22:32:38 +0000 (23:32 +0100)]
gnu: r-r-rsp: Update to 0.43.1.

* gnu/packages/statistics.scm (r-r-rsp): Update to 0.43.1.

5 years agognu: r-mvtnorm: Update to 1.0-10.
Ricardo Wurmus [Thu, 7 Mar 2019 22:32:18 +0000 (23:32 +0100)]
gnu: r-mvtnorm: Update to 1.0-10.

* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-10.

5 years agognu: r-tidyr: Update to 0.8.3.
Ricardo Wurmus [Thu, 7 Mar 2019 22:31:58 +0000 (23:31 +0100)]
gnu: r-tidyr: Update to 0.8.3.

* gnu/packages/statistics.scm (r-tidyr): Update to 0.8.3.

5 years agognu: r-purrr: Update to 0.3.1.
Ricardo Wurmus [Thu, 7 Mar 2019 22:31:40 +0000 (23:31 +0100)]
gnu: r-purrr: Update to 0.3.1.

* gnu/packages/statistics.scm (r-purrr): Update to 0.3.1.

5 years agognu: r-pbapply: Update to 1.4-0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:24:13 +0000 (23:24 +0100)]
gnu: r-pbapply: Update to 1.4-0.

* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-0.

5 years agognu: r-vgam: Update to 1.1-1.
Ricardo Wurmus [Thu, 7 Mar 2019 22:23:22 +0000 (23:23 +0100)]
gnu: r-vgam: Update to 1.1-1.

* gnu/packages/statistics.scm (r-vgam): Update to 1.1-1.

5 years agognu: r-ggthemes: Update to 4.1.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:22:54 +0000 (23:22 +0100)]
gnu: r-ggthemes: Update to 4.1.0.

* gnu/packages/statistics.scm (r-ggthemes): Update to 4.1.0.

5 years agognu: r-shiny: Update to 1.2.0.
Ricardo Wurmus [Thu, 7 Mar 2019 22:09:56 +0000 (23:09 +0100)]
gnu: r-shiny: Update to 1.2.0.

* gnu/packages/cran.scm (r-shiny): Update to 1.2.0.
[arguments]: Adjust processing of minified JavaScript.

5 years agognu: r-epi: Update to 2.35.
Ricardo Wurmus [Thu, 7 Mar 2019 22:03:22 +0000 (23:03 +0100)]
gnu: r-epi: Update to 2.35.

* gnu/packages/cran.scm (r-epi): Update to 2.35.

5 years agognu: r-network: Update to 1.14-377.
Ricardo Wurmus [Thu, 7 Mar 2019 22:02:46 +0000 (23:02 +0100)]
gnu: r-network: Update to 1.14-377.

* gnu/packages/cran.scm (r-network): Update to 1.14-377.
[propagated-inputs]: Add r-magrittr and r-tibble.

5 years agognu: r-vegan: Update to 2.5-4.
Ricardo Wurmus [Thu, 7 Mar 2019 21:25:22 +0000 (22:25 +0100)]
gnu: r-vegan: Update to 2.5-4.

* gnu/packages/cran.scm (r-vegan): Update to 2.5-4.