zimoun [Fri, 30 Oct 2020 14:52:35 +0000 (15:52 +0100)]
gnu: r-massspecwavelet: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.56.0.
zimoun [Fri, 30 Oct 2020 14:52:32 +0000 (15:52 +0100)]
gnu: r-xbseq: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-xbseq): Update to 1.22.0.
zimoun [Fri, 30 Oct 2020 14:52:29 +0000 (15:52 +0100)]
gnu: r-roar: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-roar): Update to 1.26.0.
zimoun [Fri, 30 Oct 2020 14:52:20 +0000 (15:52 +0100)]
gnu: r-yaqcaffy: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-yaqcaffy): Update to 1.50.0.
zimoun [Fri, 30 Oct 2020 14:52:17 +0000 (15:52 +0100)]
gnu: r-simpleaffy: Update to 2.66.0.
* gnu/packages/bioconductor.scm (r-simpleaffy): Update to 2.66.0.
zimoun [Fri, 30 Oct 2020 14:52:13 +0000 (15:52 +0100)]
gnu: r-gcrma: Update to 2.62.0.
* gnu/packages/bioconductor.scm (r-gcrma): Update to 2.62.0.
zimoun [Fri, 30 Oct 2020 14:52:07 +0000 (15:52 +0100)]
gnu: r-somaticsignatures: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-somaticsignatures): Update to 2.26.0.
zimoun [Fri, 30 Oct 2020 14:52:04 +0000 (15:52 +0100)]
gnu: r-gtrellis: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.22.0.
zimoun [Fri, 30 Oct 2020 14:52:01 +0000 (15:52 +0100)]
gnu: r-yamss: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-yamss): Update to 1.16.0.
zimoun [Fri, 30 Oct 2020 14:51:58 +0000 (15:51 +0100)]
gnu: r-ebimage: Update to 4.32.0.
* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.32.0.
zimoun [Fri, 30 Oct 2020 14:51:55 +0000 (15:51 +0100)]
gnu: r-aucell: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.12.0.
zimoun [Fri, 30 Oct 2020 14:51:52 +0000 (15:51 +0100)]
gnu: r-allelicimbalance: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-allelicimbalance): Update to 1.28.0.
zimoun [Fri, 30 Oct 2020 14:51:49 +0000 (15:51 +0100)]
gnu: r-annotationtools: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-annotationtools): Update to 1.64.0.
zimoun [Fri, 30 Oct 2020 14:51:46 +0000 (15:51 +0100)]
gnu: r-annotationfuncs: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-annotationfuncs): Update to 1.40.0.
zimoun [Fri, 30 Oct 2020 14:51:43 +0000 (15:51 +0100)]
gnu: r-abaenrichment: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-abaenrichment): Update to 1.20.0.
zimoun [Fri, 30 Oct 2020 14:51:39 +0000 (15:51 +0100)]
gnu: r-gofuncr: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.10.0.
zimoun [Fri, 30 Oct 2020 14:51:36 +0000 (15:51 +0100)]
gnu: r-atacseqqc: Update to 1.14.4.
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.14.4.
zimoun [Fri, 30 Oct 2020 14:51:33 +0000 (15:51 +0100)]
gnu: r-genomicscores: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.2.0.
zimoun [Fri, 30 Oct 2020 14:51:31 +0000 (15:51 +0100)]
gnu: r-motifstack: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.34.0.
zimoun [Fri, 30 Oct 2020 14:51:27 +0000 (15:51 +0100)]
gnu: r-motifbreakr: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.4.0.
zimoun [Fri, 30 Oct 2020 14:51:24 +0000 (15:51 +0100)]
gnu: r-motifdb: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-motifdb): Update to 1.32.0.
zimoun [Fri, 30 Oct 2020 14:51:21 +0000 (15:51 +0100)]
gnu: r-rgadem: Update to 2.38.0.
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.38.0.
zimoun [Fri, 30 Oct 2020 14:51:17 +0000 (15:51 +0100)]
gnu: r-bacon: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-bacon): Update to 1.18.0.
zimoun [Fri, 30 Oct 2020 14:51:14 +0000 (15:51 +0100)]
gnu: r-abseqr: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-abseqr): Update to 1.8.0.
zimoun [Fri, 30 Oct 2020 14:51:11 +0000 (15:51 +0100)]
gnu: r-a4: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-a4): Update to 1.38.0.
zimoun [Fri, 30 Oct 2020 14:51:08 +0000 (15:51 +0100)]
gnu: r-a4base: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-a4base): Update to 1.38.0.
zimoun [Fri, 30 Oct 2020 14:51:05 +0000 (15:51 +0100)]
gnu: r-a4reporting: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-a4reporting): Update to 1.38.0.
zimoun [Fri, 30 Oct 2020 14:51:02 +0000 (15:51 +0100)]
gnu: r-a4preproc: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-a4preproc): Update to 1.38.0.
zimoun [Fri, 30 Oct 2020 14:50:59 +0000 (15:50 +0100)]
gnu: r-a4classif: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-a4classif): Update to 1.38.0.
zimoun [Fri, 30 Oct 2020 14:50:56 +0000 (15:50 +0100)]
gnu: r-a4core: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-a4core): Update to 1.38.0.
zimoun [Fri, 30 Oct 2020 14:50:50 +0000 (15:50 +0100)]
gnu: r-mlinterfaces: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.70.0.
zimoun [Fri, 30 Oct 2020 14:50:46 +0000 (15:50 +0100)]
gnu: r-clusterprofiler: Update to 3.18.0.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.18.0.
Roel Janssen [Wed, 18 Nov 2020 15:59:45 +0000 (16:59 +0100)]
gnu: r-enrichplot: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.10.1.
[propagated-inputs]: Remove r-annotationdbi, r-europepmc, r-ggplotify,
r-ggridges, and r-gridextra; add r-magrittr and r-shadowtext.
Roel Janssen [Wed, 18 Nov 2020 15:59:15 +0000 (16:59 +0100)]
gnu: Add r-shadowtext.
* gnu/packages/cran.scm (r-shadowtext): New variable.
zimoun [Fri, 30 Oct 2020 14:50:40 +0000 (15:50 +0100)]
gnu: r-dose: Update to 3.16.0.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.16.0.
zimoun [Fri, 30 Oct 2020 14:50:37 +0000 (15:50 +0100)]
gnu: r-fgsea: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.16.0.
zimoun [Fri, 30 Oct 2020 14:50:34 +0000 (15:50 +0100)]
gnu: r-sigpathway: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.58.0.
zimoun [Fri, 30 Oct 2020 14:50:31 +0000 (15:50 +0100)]
gnu: r-anota: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-anota): Update to 1.38.0.
zimoun [Fri, 30 Oct 2020 14:50:28 +0000 (15:50 +0100)]
gnu: r-gosemsim: Update to 2.16.1.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.16.1.
zimoun [Fri, 30 Oct 2020 14:50:25 +0000 (15:50 +0100)]
gnu: r-heatplus: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.36.0.
zimoun [Fri, 30 Oct 2020 14:50:22 +0000 (15:50 +0100)]
gnu: r-varianttools: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-varianttools): Update to 1.32.0.
zimoun [Fri, 30 Oct 2020 14:50:19 +0000 (15:50 +0100)]
gnu: r-ioniser: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-ioniser): Update to 2.14.0.
zimoun [Fri, 30 Oct 2020 14:50:16 +0000 (15:50 +0100)]
gnu: r-linnorm: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.14.0.
zimoun [Fri, 30 Oct 2020 14:50:03 +0000 (15:50 +0100)]
gnu: r-bumphunter: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-bumphunter): Update to 1.32.0.
zimoun [Fri, 30 Oct 2020 14:50:00 +0000 (15:50 +0100)]
gnu: r-siggenes: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-siggenes): Update to 1.64.0.
zimoun [Fri, 30 Oct 2020 14:49:57 +0000 (15:49 +0100)]
gnu: r-illuminaio: Update to 0.32.0.
* gnu/packages/bioconductor.scm (r-illuminaio): Update to 0.32.0.
zimoun [Fri, 30 Oct 2020 14:49:54 +0000 (15:49 +0100)]
gnu: r-geoquery: Update to 2.58.0.
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.58.0.
zimoun [Fri, 30 Oct 2020 14:49:51 +0000 (15:49 +0100)]
gnu: r-scone: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-scone): Update to 1.14.0.
zimoun [Fri, 30 Oct 2020 14:49:45 +0000 (15:49 +0100)]
gnu: r-noiseq: Update to 2.34.0.
* gnu/packages/bioconductor.scm (r-noiseq): Update to 2.34.0.
zimoun [Fri, 30 Oct 2020 14:49:42 +0000 (15:49 +0100)]
gnu: r-monocle: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.18.0.
zimoun [Fri, 30 Oct 2020 14:49:39 +0000 (15:49 +0100)]
gnu: r-mast: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-mast): Update to 1.16.0.
zimoun [Fri, 30 Oct 2020 14:49:36 +0000 (15:49 +0100)]
gnu: r-icobra: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.18.0.
zimoun [Fri, 30 Oct 2020 14:49:33 +0000 (15:49 +0100)]
gnu: r-ihw: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-ihw): Update to 1.18.0.
zimoun [Fri, 30 Oct 2020 14:49:29 +0000 (15:49 +0100)]
gnu: r-lpsymphony: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.18.0.
zimoun [Fri, 30 Oct 2020 14:49:26 +0000 (15:49 +0100)]
gnu: r-karyoploter: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.16.0.
zimoun [Fri, 30 Oct 2020 14:49:23 +0000 (15:49 +0100)]
gnu: r-ebseq: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-ebseq): Update to 1.30.0.
zimoun [Fri, 30 Oct 2020 14:49:20 +0000 (15:49 +0100)]
gnu: r-dnacopy: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.64.0.
zimoun [Fri, 30 Oct 2020 14:49:17 +0000 (15:49 +0100)]
gnu: r-copynumber: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.30.0.
zimoun [Fri, 30 Oct 2020 14:49:14 +0000 (15:49 +0100)]
gnu: r-chipexoqual: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.14.0.
zimoun [Fri, 30 Oct 2020 14:49:11 +0000 (15:49 +0100)]
gnu: r-savr: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-savr): Update to 1.28.0.
zimoun [Fri, 30 Oct 2020 14:49:07 +0000 (15:49 +0100)]
gnu: r-destiny: Update to 3.4.0.
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.4.0.
[propagated-inputs]: Remove r-nbconvertr.
zimoun [Fri, 30 Oct 2020 14:49:01 +0000 (15:49 +0100)]
gnu: r-biocneighbors: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.8.0.
zimoun [Fri, 30 Oct 2020 14:48:58 +0000 (15:48 +0100)]
gnu: r-ruvseq: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.24.0.
zimoun [Fri, 30 Oct 2020 14:48:55 +0000 (15:48 +0100)]
gnu: r-dnabarcodes: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.20.0.
zimoun [Fri, 30 Oct 2020 14:48:52 +0000 (15:48 +0100)]
gnu: r-inspect: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.20.0.
zimoun [Fri, 30 Oct 2020 14:48:48 +0000 (15:48 +0100)]
gnu: r-plgem: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-plgem): Update to 1.62.0.
zimoun [Fri, 30 Oct 2020 14:48:45 +0000 (15:48 +0100)]
gnu: r-rots: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.18.0.
zimoun [Fri, 30 Oct 2020 14:48:42 +0000 (15:48 +0100)]
gnu: r-glimma: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 2.0.0.
zimoun [Fri, 30 Oct 2020 14:48:39 +0000 (15:48 +0100)]
gnu: r-goseq: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.42.0.
zimoun [Fri, 30 Oct 2020 14:48:36 +0000 (15:48 +0100)]
gnu: r-ctc: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-ctc): Update to 1.64.0.
zimoun [Fri, 30 Oct 2020 14:48:27 +0000 (15:48 +0100)]
gnu: r-riboseqr: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.24.0.
zimoun [Fri, 30 Oct 2020 14:48:24 +0000 (15:48 +0100)]
gnu: r-riboprofiling: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.20.0.
zimoun [Fri, 30 Oct 2020 14:48:18 +0000 (15:48 +0100)]
gnu: r-bayseq: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.24.0.
zimoun [Fri, 30 Oct 2020 14:48:14 +0000 (15:48 +0100)]
gnu: r-qdnaseq: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.26.0.
zimoun [Fri, 30 Oct 2020 14:48:11 +0000 (15:48 +0100)]
gnu: r-cghcall: Update to 2.52.0.
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.52.0.
zimoun [Fri, 30 Oct 2020 14:48:08 +0000 (15:48 +0100)]
gnu: r-cghbase: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.50.0.
zimoun [Fri, 30 Oct 2020 14:48:05 +0000 (15:48 +0100)]
gnu: r-marray: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.68.0.
zimoun [Fri, 30 Oct 2020 14:48:02 +0000 (15:48 +0100)]
gnu: r-chippeakanno: Update to 3.24.0.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.24.0.
zimoun [Fri, 30 Oct 2020 14:47:59 +0000 (15:47 +0100)]
gnu: r-graph: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.68.0.
zimoun [Fri, 30 Oct 2020 14:47:56 +0000 (15:47 +0100)]
gnu: r-multtest: Update to 2.46.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.46.0.
Roel Janssen [Wed, 18 Nov 2020 15:48:25 +0000 (16:48 +0100)]
gnu: r-diffbind: Update to 3.0.7.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.7.
[propagated-inputs]: Add r-apeglm, r-ashr, and r-greylistchip; remove r-edger.
Roel Janssen [Wed, 18 Nov 2020 15:47:44 +0000 (16:47 +0100)]
gnu: Add r-greylistchip.
* gnu/packages/bioconductor.scm (r-greylistchip): New variable.
Roel Janssen [Wed, 18 Nov 2020 15:41:54 +0000 (16:41 +0100)]
gnu: Add r-ashr.
* gnu/packages/cran.scm (r-ashr): New variable.
Roel Janssen [Wed, 18 Nov 2020 15:40:13 +0000 (16:40 +0100)]
gnu: Add r-mixsqp.
* gnu/packages/cran.scm (r-mixsqp): New variable.
Roel Janssen [Wed, 18 Nov 2020 15:32:25 +0000 (16:32 +0100)]
gnu: Add r-etrunct.
* gnu/packages/cran.scm (r-etrunct): New variable.
Roel Janssen [Wed, 18 Nov 2020 15:34:45 +0000 (16:34 +0100)]
gnu: Add r-invgamma.
* gnu/packages/cran.scm (r-invgamma): New variable.
Roel Janssen [Wed, 18 Nov 2020 15:25:46 +0000 (16:25 +0100)]
gnu: Add r-apeglm.
* gnu/packages/bioconductor.scm (r-apeglm): New variable.
Roel Janssen [Wed, 18 Nov 2020 15:25:15 +0000 (16:25 +0100)]
gnu: Add r-rcppnumerical.
* gnu/packages/bioconductor.scm (r-rcppnumerical): New variable.
zimoun [Fri, 30 Oct 2020 14:47:50 +0000 (15:47 +0100)]
gnu: r-qvalue: Update to 2.22.0.
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.22.0.
zimoun [Fri, 30 Oct 2020 14:47:47 +0000 (15:47 +0100)]
gnu: r-oligo: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-oligo): Update to 1.54.0.
zimoun [Fri, 30 Oct 2020 14:47:44 +0000 (15:47 +0100)]
gnu: r-oligoclasses: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-oligoclasses): Update to 1.52.0.
zimoun [Fri, 30 Oct 2020 14:47:40 +0000 (15:47 +0100)]
gnu: r-geneplotter: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.68.0.
zimoun [Fri, 30 Oct 2020 14:47:37 +0000 (15:47 +0100)]
gnu: r-reportingtools: Update to 2.30.0.
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.30.0.
zimoun [Fri, 30 Oct 2020 14:47:34 +0000 (15:47 +0100)]
gnu: r-regioner: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.22.0.
zimoun [Fri, 30 Oct 2020 14:47:31 +0000 (15:47 +0100)]
gnu: r-hpar: Update to 1.32.1.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.32.1.
zimoun [Fri, 30 Oct 2020 14:47:28 +0000 (15:47 +0100)]
gnu: r-annotate: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.68.0.
[propagated-inputs]: Remove 'r-rcurl', add 'r-httr'.
zimoun [Fri, 30 Oct 2020 14:47:25 +0000 (15:47 +0100)]
gnu: r-affxparser: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.62.0.
zimoun [Fri, 30 Oct 2020 14:47:22 +0000 (15:47 +0100)]
gnu: r-affycoretools: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.62.0.
zimoun [Fri, 30 Oct 2020 14:47:19 +0000 (15:47 +0100)]
gnu: r-affycontam: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.48.0.
zimoun [Fri, 30 Oct 2020 14:47:16 +0000 (15:47 +0100)]
gnu: r-affycompatible: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.50.0.
HCoop / jackhill / guix / guix.git / log