jackhill/guix/guix.git
4 years agognu: tzdata-for-tests: Update to 2019c.
Marius Bakke [Mon, 20 Jan 2020 17:08:09 +0000 (18:08 +0100)]
gnu: tzdata-for-tests: Update to 2019c.

* gnu/packages/base.scm (tzdata-for-tests): Inherit all of TZDATA.

4 years agognu: guile@3.0: Do not inherit all patches from guile@2.2.
Marius Bakke [Mon, 20 Jan 2020 17:05:47 +0000 (18:05 +0100)]
gnu: guile@3.0: Do not inherit all patches from guile@2.2.

* gnu/packages/guile.scm (guile-3.0)[source](patches): New field.

4 years agognu: gmp: Update to 6.2.0.
Marius Bakke [Sun, 19 Jan 2020 10:03:49 +0000 (11:03 +0100)]
gnu: gmp: Update to 6.2.0.

* gnu/packages/multiprecision.scm (gmp): Update to 6.2.0.

4 years agognu: libcap: Enable tests.
Marius Bakke [Mon, 20 Jan 2020 17:06:58 +0000 (18:06 +0100)]
gnu: libcap: Enable tests.

* gnu/packages/linux.scm (libcap)[arguments]: Remove #:tests?.  Add #:test-target.

4 years agognu: libcap: Update to 2.31.
Marius Bakke [Sun, 19 Jan 2020 10:00:26 +0000 (11:00 +0100)]
gnu: libcap: Update to 2.31.

* gnu/packages/linux.scm (libcap): Update to 2.31.
[inputs]: Remove ATTR.

4 years agognu: Remove texinfo@6.6
Marius Bakke [Tue, 14 Jan 2020 19:17:46 +0000 (20:17 +0100)]
gnu: Remove texinfo@6.6

* gnu/packages/texinfo.scm (texinfo): Update to 6.7.
(texinfo-6.7): Remove variable.

4 years agoMerge branch 'staging' into core-updates
Marius Bakke [Tue, 21 Jan 2020 21:39:42 +0000 (22:39 +0100)]
Merge branch 'staging' into core-updates

4 years agoMerge branch 'master' into staging
Marius Bakke [Tue, 21 Jan 2020 20:34:41 +0000 (21:34 +0100)]
Merge branch 'master' into staging

4 years agognu: gst-plugins-good: Disable failing tests on armhf-linux.
Marius Bakke [Tue, 21 Jan 2020 20:13:35 +0000 (21:13 +0100)]
gnu: gst-plugins-good: Disable failing tests on armhf-linux.

* gnu/packages/gstreamer.scm (gst-plugins-good)[arguments]: Add phase when
building for armhf-linux.

4 years agognu: gst-plugins-bad: Disable failing test on armhf-linux.
Marius Bakke [Tue, 21 Jan 2020 20:12:48 +0000 (21:12 +0100)]
gnu: gst-plugins-bad: Disable failing test on armhf-linux.

* gnu/packages/gstreamer.scm (gst-plugins-bad)[arguments]: Add phase when
building for armhf-linux.

4 years agognu: gstreamer: Disable two tests on i686.
Marius Bakke [Tue, 21 Jan 2020 20:10:49 +0000 (21:10 +0100)]
gnu: gstreamer: Disable two tests on i686.

* gnu/packages/gstreamer.scm (gstreamer)[arguments]: Add phase when building
for i686 systems.

4 years agognu: nim: Fix /bin/sh substitution in C code.
Jakub Kądziołka [Thu, 16 Jan 2020 22:14:41 +0000 (23:14 +0100)]
gnu: nim: Fix /bin/sh substitution in C code.

* gnu/packages/nim.scm (nim)[arguments]: Patch the string length too.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
4 years agognu: ungoogled-chromium: Update to 79.0.3945.130-0.e2fae99.
Marius Bakke [Tue, 21 Jan 2020 20:18:11 +0000 (21:18 +0100)]
gnu: ungoogled-chromium: Update to 79.0.3945.130-0.e2fae99.

* gnu/packages/chromium.scm (%chromium-version): Set to 79.0.3945.130.
(%ungoogled-revision): Set to e2fae99.
(%debian-revision): Set to debian/79.0.3945.130-2.
(%chromium-origin, %ungoogled-origin, %debian-origin): Update hashes.
(ungoogled-chromium-source): Ignore comments in debian/patches/series.
(libvpx/chromium, gentoo-patch): Remove variables.
(ungoogled-chromium)[inputs]: Change from LIBVPX/CHROMIUM to LIBVPX.
(ungoogled-chromium/wayland): Add 'ozone_platform="wayland"' in #:configure-flags.

4 years agognu: mrustc: Update to 0.9.
Danny Milosavljevic [Tue, 21 Jan 2020 19:30:06 +0000 (20:30 +0100)]
gnu: mrustc: Update to 0.9.

* gnu/packages/rust.scm (mrustc): update to 0.9.
[arguments]<#:test-target]: Change to "test".
<#:phases>[unpack-target-compiler]: Modify.
[install]: Modify.
(rust-1.19)[arguments]<#:phases>[build]: Modify.

4 years agognu: rust-pcre2-sys-0.2: Unbundle vendored source.
Efraim Flashner [Tue, 21 Jan 2020 16:49:10 +0000 (18:49 +0200)]
gnu: rust-pcre2-sys-0.2: Unbundle vendored source.

* gnu/packages/crates-io.scm (rust-pcre2-sys-0.2)[arguments]: Don't skip
build. Add custom phase to delete vendored sources.
[native-inputs]: Add pcre2, pkg-config.

4 years agognu: mrustc: Clean up.
Danny Milosavljevic [Tue, 21 Jan 2020 15:47:10 +0000 (16:47 +0100)]
gnu: mrustc: Clean up.

* gnu/packages/rust.scm (mrust)[native-inputs]: Remove zlib.
[inputs]: Remove llvm.  Add zlib.
[arguments]<#:make-flags>: Remove LLVM_CONFIG.  Add RUSTC_TARGET.
[patch-date]: Modify.
[unpack-target-compiler]: Modify.
[configure]: Add CXX.
[build-minicargo]: Modify.
[install]: Install run_rustc.

4 years agognu: rust-jemalloc-sys-0.3: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 16:32:03 +0000 (18:32 +0200)]
gnu: rust-jemalloc-sys-0.3: Don't hide package.

* gnu/packages/crates-io.scm (rust-jemalloc-sys-0.3)[arguments]: Add
rust-libc-0.2, rust-cc-1.0, rust-fs-extra-1.1 to cargo-inputs. Add
custom phase to delete vendored sources.
[native-inputs]: Add jemalloc.
[properties]: Remove field.

4 years agognu: rust-num-cpus-1.10: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 16:19:39 +0000 (18:19 +0200)]
gnu: rust-num-cpus-1.10: Don't hide package.

* gnu/packages/crates-io.scm (rust-num-cpus-1.10)[arguments]: Skip
build. Add rust-libc-0.2 to cargo-inputs. Add rust-doc-comment-0.3 to
cargo-development-inputs.
[properties]: Remove field.

4 years agognu: rust-libz-sys-1.0: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 16:15:50 +0000 (18:15 +0200)]
gnu: rust-libz-sys-1.0: Don't hide package.

* gnu/packages/crates-io.scm (rust-libz-sys-1.0)[arguments]: Add
rust-libc-0.2, rust-cc-1.0, rust-pkg-config-0.3, rust-vcpkg-0.2 to
cargo-inputs. Add custom phase to delete vendored source.
[native-inputs]: Add pkg-config, zlib.
[properties]: Remove field.

4 years agognu: rust-net2-0.2: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 16:09:23 +0000 (18:09 +0200)]
gnu: rust-net2-0.2: Don't hide package.

* gnu/packages/crates-io.scm (rust-net2-0.2)[arguments]: Skip build. Add
rust-cfg-if-0.1, rust-libc-0.2, rust-winapi-0.3 to cargo-inputs.
[properties]: Remove field.

4 years agognu: rust-miow-0.2: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 16:07:11 +0000 (18:07 +0200)]
gnu: rust-miow-0.2: Don't hide package.

* gnu/packages/crates-io.scm (rust-miow-0.2)[arguments]: Skip build. Add
rust-kernel32-sys-0.2, rust-net2-0.2, rust-winapi-0.2, rust-ws2-32-sys-0.2
to cargo-inputs. Add rust-rand-0.3 to cargo-development-inputs.
[properties]: Remove field.

4 years agognu: rust-miow-0.3: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 16:03:12 +0000 (18:03 +0200)]
gnu: rust-miow-0.3: Don't hide package.

* gnu/packages/crates-io.scm (rust-miow-0.3)[arguments]: Skip build. Add
rust-socket2-0.3, rust-winapi-0.3 to cargo-inputs. Add rust-rand-0.4 to
cargo-development-inputs.
[properties]: Remove field.

4 years agognu: rust-miniz-sys-0.1: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 15:59:58 +0000 (17:59 +0200)]
gnu: rust-miniz-sys-0.1: Don't hide package.

* gnu/packages/crates-io.scm (rust-miniz-sys-0.1)[arguments]: Add
rust-libc-0.2, rust-cc-1.0 to cargo-inputs.
[properties]: Remove field.

4 years agognu: rust-mime-0.3: Update to 0.3.16.
Efraim Flashner [Tue, 21 Jan 2020 15:57:40 +0000 (17:57 +0200)]
gnu: rust-mime-0.3: Update to 0.3.16.

* gnu/packages/crates-io.scm (rust-mime-0.3): Update to 0.3.16.
[arguments]: Remove rust-unicase-2.4 from cargo-inputs.

4 years agognu: rust-mime-0.3: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 15:56:45 +0000 (17:56 +0200)]
gnu: rust-mime-0.3: Don't hide package.

* gnu/packages/crates-io.scm (rust-mime-0.3)[arguments]: Skip build. Add
rust-unicase-2.4 to cargo-inputs.
[properties]: Remove field.

4 years agognu: rust-memmap-0.7: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 15:53:49 +0000 (17:53 +0200)]
gnu: rust-memmap-0.7: Don't hide package.

* gnu/packages/crates-io.scm (rust-memmap-0.7)[arguments]: Skip build.
Add rust-libc-0.2, rust-winapi-0.3 to cargo-inputs. Add rust-tempdir-0.3
to cargo-development-inputs.
[properties]: Remove field.

4 years agognu: rust-md5-0.6: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 15:51:01 +0000 (17:51 +0200)]
gnu: rust-md5-0.6: Don't hide package.

* gnu/packages/crates-io.scm (rust-md5-0.6)[arguments]: Skip build.
[properties]: Remove field.

4 years agognu: mrustc: Update to 0.8.1.
Danny Milosavljevic [Tue, 21 Jan 2020 15:44:18 +0000 (16:44 +0100)]
gnu: mrustc: Update to 0.8.1.

* gnu/packages/patches/mrustc-0.8.0-fix-variable-length-integer-receiving.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/rust.scm (mrustc): Update to 0.8.1.
[source](patches): Remove it.
[native-inputs]: Add zlib.

4 years agognu: rust-matches-0.1: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 15:49:00 +0000 (17:49 +0200)]
gnu: rust-matches-0.1: Don't hide package.

* gnu/packages/crates-io.scm (rust-matches-0.1)[arguments]: Skip build.
[properties]: Remove field.

4 years agognu: rust-maplit-1.0: Upgrade to 1.0.2.
Efraim Flashner [Tue, 21 Jan 2020 15:46:33 +0000 (17:46 +0200)]
gnu: rust-maplit-1.0: Upgrade to 1.0.2.

* gnu/packages/crates-io.scm (rust-maplit-1.0): Upgrade to 1.0.2.

4 years agognu: rust-maplit-1.0: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 15:45:53 +0000 (17:45 +0200)]
gnu: rust-maplit-1.0: Don't hide package.

* gnu/packages/crates-io.scm (rust-maplit-1.0)[arguments]: Skip build.
[properties]: Remove field.

4 years agognu: rust-lzma-sys-0.1: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 15:44:06 +0000 (17:44 +0200)]
gnu: rust-lzma-sys-0.1: Don't hide package.

* gnu/packages/crates-io.scm (rust-lzma-sys-0.1)[arguments]: Add
rust-libc-0.2, rust-cc-1.0, rust-pkg-config-0.3 to cargo-inputs. Add
custom phase to delete vendored code.
[native-inputs]: Add pkg-config, xz.
[properties]: Remove field.

4 years agognu: rust-permutohedron-0.2: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 15:28:18 +0000 (17:28 +0200)]
gnu: rust-permutohedron-0.2: Don't hide package.

* gnu/packages/crates-io.scm (rust-permutohedron-0.2)[arguments]: Skip
build.
[properties]: Remove field.

4 years agognu: Add rust-matrixmultiply-0.1.
Efraim Flashner [Tue, 21 Jan 2020 15:26:30 +0000 (17:26 +0200)]
gnu: Add rust-matrixmultiply-0.1.

* gnu/packages/crates-io.scm (rust-matrixmultiply-0.1): New variable.

4 years agognu: Add rust-heck-0.3.
Efraim Flashner [Tue, 21 Jan 2020 15:24:31 +0000 (17:24 +0200)]
gnu: Add rust-heck-0.3.

* gnu/packages/crates-io.scm (rust-heck-0.3): New variable.

4 years agognu: rust-unicode-segmentation-1.3: Fix inputs.
Efraim Flashner [Tue, 21 Jan 2020 15:06:40 +0000 (17:06 +0200)]
gnu: rust-unicode-segmentation-1.3: Fix inputs.

* gnu/packages/crates-io.scm (rust-unicode-segmentation-1.3)[arguments]:
Replace rust-quickcheck-0.8 with 0.7 in cargo-development-inputs.

4 years agognu: Add rust-quickcheck-0.5.
Efraim Flashner [Tue, 21 Jan 2020 15:04:07 +0000 (17:04 +0200)]
gnu: Add rust-quickcheck-0.5.

* gnu/packages/crates-io.scm (rust-quickcheck-0.5): New variable.

4 years agognu: librsvg-next-source: Replace and update some dependencies.
John Soo [Tue, 21 Jan 2020 08:42:32 +0000 (00:42 -0800)]
gnu: librsvg-next-source: Replace and update some dependencies.

* gnu/packages/gnome.scm (librsvg-next-source): Update vendored replacements.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-libssh2-sys-0.2: Update to 0.2.14.
Efraim Flashner [Tue, 21 Jan 2020 12:48:34 +0000 (14:48 +0200)]
gnu: rust-libssh2-sys-0.2: Update to 0.2.14.

* gnu/packages/crates-io.scm (rust-libssh2-sys-0.2): Update to 0.2.14.

4 years agognu: rust-openssl-sys-0.9: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 11:20:00 +0000 (13:20 +0200)]
gnu: rust-openssl-sys-0.9: Don't hide package.

* gnu/packages/crates-io.scm (rust-openssl-sys-0.9)[arguments]: Add
rust-libc-0.2, rust-autocfg-0.1, rust-cc-1.0, rust-pkg-config-0.3,
rust-vcpkg-0.2 to cargo-inputs. Add custom phase to find packaged
openssl.
[native-inputs]: Add openssl, pkg-config.
[properties]: Remove field.

4 years agognu: rust-libssh2-sys-0.2: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 11:13:08 +0000 (13:13 +0200)]
gnu: rust-libssh2-sys-0.2: Don't hide package.

* gnu/packages/crates-io.scm (rust-libssh2-sys-0.2)[arguments]: Add
rust-libc-0.2, rust-libz-sys-1.0, rust-openssl-sys-0.9, rust-cc-1.0,
rust-pkg-config-0.3, rust-vcpkg-0.2 to cargo-inputs. Add custom phase to
unbundle vendored sources and set environment variables.
[native-inputs]: Add libssh2, openssl, pkg-config, zlib.
[properties]: Remove field.

4 years agognu: rust-libgit2-sys-0.10: Don't hide package.
Efraim Flashner [Tue, 21 Jan 2020 11:07:11 +0000 (13:07 +0200)]
gnu: rust-libgit2-sys-0.10: Don't hide package.

* gnu/packages/crates-io.scm (rust-libgit2-sys-0.10)[arguments]: Add
rust-libc-0.2, rust-libz-sys-1.0, rust-libssh2-sys-0.2,
rust-openssl-sys-0.9, rust-cc-1.0, rust-pkg-config-0.3 to cargo-inputs.
Add custom phase to unbundle vendored sources and set environment
variables.
[native-inputs]: Add libgit2, openssl, pkg-config, zlib.
[properties]: Remove field.

4 years agognu: tokei: Unbundle some dependencies.
Efraim Flashner [Tue, 21 Jan 2020 10:52:11 +0000 (12:52 +0200)]
gnu: tokei: Unbundle some dependencies.

* gnu/packages/rust-apps.scm (tokei)[arguments]: Add custom phase to
delete vendored sources and set environment variables. Remove
rust-cc-1.0, rust-pkg-config-0.3, rust-toml-0.5 from cargo-inputs.
[native-inputs]: Add libgit2, openssl, pkg-config, zlib.

4 years agognu: rust-failure-derive-0.1: Fix inputs.
Efraim Flashner [Tue, 21 Jan 2020 10:10:50 +0000 (12:10 +0200)]
gnu: rust-failure-derive-0.1: Fix inputs.

* gnu/packages/crates-io.scm (rust-failure-derive-0.1)[arguments]:
Replace rust-quote-1.0 with 0.6 in cargo-inputs.

4 years agognu: Add tokei.
John Soo [Wed, 15 Jan 2020 18:02:38 +0000 (10:02 -0800)]
gnu: Add tokei.

* gnu/packages/rust-apps.scm (tokei): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-rust-argon2-0.5.
John Soo [Fri, 17 Jan 2020 04:42:34 +0000 (20:42 -0800)]
gnu: Add rust-rust-argon2-0.5.

* gnu/packages/crates-io.scm (rust-rust-argon2-0.5): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-blake2b-simd-0.5.
John Soo [Fri, 17 Jan 2020 04:41:54 +0000 (20:41 -0800)]
gnu: Add rust-blake2b-simd-0.5.

* gnu/packages/crates-io.scm (rust-blake2b-simd-0.5): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-arrayvec-0.5.
John Soo [Fri, 17 Jan 2020 04:40:00 +0000 (20:40 -0800)]
gnu: Add rust-arrayvec-0.5.

* gnu/packages/crates-io.scm (rust-arrayvec-0.5): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-thread-local-1.0: Don't hide package.
Efraim Flashner [Mon, 20 Jan 2020 20:21:13 +0000 (22:21 +0200)]
gnu: rust-thread-local-1.0: Don't hide package.

* gnu/packages/crates-io.scm (rust-thread-local-1.0)[arguments]: Skip
build. Add rust-lazy-static-1.4 to cargo-inputs.
[properties]: Remove field.

4 years agognu: rust-thread-local-0.3: Don't hide package.
John Soo [Fri, 17 Jan 2020 03:57:17 +0000 (19:57 -0800)]
gnu: rust-thread-local-0.3: Don't hide package.

* gnu/packages/crates-io.scm (rust-thread-local-0.3)[arguments]: Skip build.
Add rust-lazy-static-1.4 to cargo-inputs.
[properties]: Don't inherit field.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-thread-local-1.0.
John Soo [Fri, 17 Jan 2020 03:59:26 +0000 (19:59 -0800)]
gnu: Add rust-thread-local-1.0.

* gnu/packages/crates-io.scm (rust-thread-local-1.0): New variable.
(rust-thread-local-0.3): Inherit from rust-thread-local-1.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-arrayref-0.3.
John Soo [Fri, 17 Jan 2020 04:36:53 +0000 (20:36 -0800)]
gnu: Add rust-arrayref-0.3.

* gnu/packages/crates-io.scm (rust-arrayref-0.3): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-kernel32-sys-0.2: Update dependencies.
John Soo [Thu, 16 Jan 2020 07:48:33 +0000 (23:48 -0800)]
gnu: rust-kernel32-sys-0.2: Update dependencies.

* gnu/packages/crates-io.scm (rust-kernel32-sys-0.2)[arguments]: Move
rust-winapi-build-0.1 from cargo-development-inputs to cargo-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-pest-generator-2.1: Update to 2.1.1.
John Soo [Fri, 17 Jan 2020 03:46:25 +0000 (19:46 -0800)]
gnu: rust-pest-generator-2.1: Update to 2.1.1.

* gnu/packages/crates-io.scm (rust-pest-generator-2.1): Update to 2.1.1.
[arguments]: In cargo-inputs replace rust-proc-macro2-0.4 with 1.0,
rust-quote-0.6 with 1.0, rust-syn-0.15 with 1.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-pest-meta-2.1: Update to 2.1.2.
John Soo [Fri, 17 Jan 2020 03:48:27 +0000 (19:48 -0800)]
gnu: rust-pest-meta-2.1: Update to 2.1.2.

* gnu/packages/crates-io.scm (rust-pest-meta-2.1): Update to 2.1.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-pest-meta-2.1: Update dependencies.
John Soo [Thu, 16 Jan 2020 06:43:45 +0000 (22:43 -0800)]
gnu: rust-pest-meta-2.1: Update dependencies.

* gnu/packages/crates-io.scm (rust-pest-meta-2.1)[arguments]: Move
rust-sha-1-0.8 from cargo-development-inputs to cargo-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-pest-generator-2.1: Update dependencies.
John Soo [Thu, 16 Jan 2020 06:39:28 +0000 (22:39 -0800)]
gnu: rust-pest-generator-2.1: Update dependencies.

* gnu/packages/crates-io.scm (rust-pest-generator-2.1)[arguments]:
Replace rust-quote-1.0 with 0.6 in cargo-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-jobserver-0.1.
John Soo [Thu, 16 Jan 2020 06:30:20 +0000 (22:30 -0800)]
gnu: Add rust-jobserver-0.1.

* gnu/packages/crates-io.scm (rust-jobserver-0.1): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-tokio-core-0.1.
John Soo [Thu, 16 Jan 2020 06:08:50 +0000 (22:08 -0800)]
gnu: Add rust-tokio-core-0.1.

* gnu/packages/crates-io.scm (rust-tokio-core-0.1): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-quickcheck-0.6.
Efraim Flashner [Mon, 20 Jan 2020 19:49:03 +0000 (21:49 +0200)]
gnu: Add rust-quickcheck-0.6.

* gnu/packages/crates-io.scm (rust-quickcheck-0.6): New variable.

4 years agognu: Add rust-regex-syntax-0.5.
Efraim Flashner [Mon, 20 Jan 2020 19:47:19 +0000 (21:47 +0200)]
gnu: Add rust-regex-syntax-0.5.

* gnu/packages/crates-io.scm (rust-regex-syntax-0.5): New variable.

4 years agognu: Add rust-rand-core-0.2.
Efraim Flashner [Mon, 20 Jan 2020 19:44:57 +0000 (21:44 +0200)]
gnu: Add rust-rand-core-0.2.

* gnu/packages/crates-io.scm (rust-rand-core-0.2): New variable.

4 years agognu: Add rust-env-logger-0.5.
Efraim Flashner [Mon, 20 Jan 2020 19:42:42 +0000 (21:42 +0200)]
gnu: Add rust-env-logger-0.5.

* gnu/packages/crates-io.scm (rust-env-logger-0.5): New variable.

4 years agognu: Add rust-quickcheck-0.7.
Efraim Flashner [Mon, 20 Jan 2020 19:40:27 +0000 (21:40 +0200)]
gnu: Add rust-quickcheck-0.7.

* gnu/packages/crates-io.scm (rust-quickcheck-0.7): New variable.

4 years agognu: Add rust-aho-corasick-0.6.
Efraim Flashner [Mon, 20 Jan 2020 19:38:20 +0000 (21:38 +0200)]
gnu: Add rust-aho-corasick-0.6.

* gnu/packages/crates-io.scm (rust-aho-corasick-0.6.): New variable.

4 years agognu: Add rust-regex-0.2.
Efraim Flashner [Mon, 20 Jan 2020 19:35:21 +0000 (21:35 +0200)]
gnu: Add rust-regex-0.2.

* gnu/packages/crates-io.scm (rust-regex-0.2): New variable.

4 years agognu: Add rust-env-logger-0.4.
Efraim Flashner [Mon, 20 Jan 2020 19:32:49 +0000 (21:32 +0200)]
gnu: Add rust-env-logger-0.4.

* gnu/packages/crates-io.scm (rust-env-logger-0.4): New variable.

4 years agognu: Add rust-mio-named-pipes-0.1.
John Soo [Thu, 16 Jan 2020 06:21:51 +0000 (22:21 -0800)]
gnu: Add rust-mio-named-pipes-0.1.

* gnu/packages/crates-io.scm (rust-mio-named-pipes-0.1): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-tokio-process-0.2.
John Soo [Thu, 16 Jan 2020 06:29:35 +0000 (22:29 -0800)]
gnu: Add rust-tokio-process-0.2.

* gnu/packages/crates-io.scm (rust-tokio-process-0.2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-tokio-signal-0.2.
John Soo [Thu, 16 Jan 2020 06:28:54 +0000 (22:28 -0800)]
gnu: Add rust-tokio-signal-0.2.

* gnu/packages/crates-io.scm (rust-tokio-signal-0.2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-cc-1.0: Update to 1.0.50.
John Soo [Thu, 16 Jan 2020 05:42:07 +0000 (21:42 -0800)]
gnu: rust-cc-1.0: Update to 1.0.50.

* gnu/packages/crates-io.scm (rust-cc-1.0): Update to 1.0.50.
[arguments]: Remove rust-rayon-1.1 from cargo-inputs, add
rust-jobserver-0.1. Remove rust-tempdir-0.3 from
cargo-development-inputs, add rust-tempfile-3.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-quick-error-1.2: Don't hide package.
John Soo [Thu, 16 Jan 2020 04:25:35 +0000 (20:25 -0800)]
gnu: rust-quick-error-1.2: Don't hide package.

* gnu/packages/crates-io.scm (rust-quick-error-1.2)[arguments]: Skip build.
[properties] Remove field.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-quick-error-1.2: Update to 1.2.3.
John Soo [Thu, 16 Jan 2020 04:26:32 +0000 (20:26 -0800)]
gnu: rust-quick-error-1.2: Update to 1.2.3.

* gnu/packages/crates-io.scm (rust-quick-error-1.2): Update to 1.2.3.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-rand-0.5.
Efraim Flashner [Mon, 20 Jan 2020 19:23:07 +0000 (21:23 +0200)]
gnu: Add rust-rand-0.5.

* gnu/packages/crates-io.scm (rust-rand-0.5): New variable.

4 years agognu: Add rust-hashbrown-0.5.
John Soo [Thu, 16 Jan 2020 04:08:32 +0000 (20:08 -0800)]
gnu: Add rust-hashbrown-0.5.

* gnu/packages/crates-io.scm (rust-hashbrown-0.5): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-rustc-std-workspace-alloc-1.0.
John Soo [Thu, 16 Jan 2020 04:01:01 +0000 (20:01 -0800)]
gnu: Add rust-rustc-std-workspace-alloc-1.0.

* gnu/packages/crates-io.scm (rust-rustc-std-workspace-alloc-1.0): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-regex-syntax-0.6: Update to 0.6.13.
John Soo [Wed, 15 Jan 2020 18:38:13 +0000 (10:38 -0800)]
gnu: rust-regex-syntax-0.6: Update to 0.6.13.

* gnu/packages/crates-io.scm (rust-regex-syntax-0.6): Update to 0.6.13.
[arguments]: Remove rust-ucd-util-0.1 from cargo-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-serde-derive-1.0: Update to 1.0.104.
John Soo [Wed, 15 Jan 2020 17:58:32 +0000 (09:58 -0800)]
gnu: rust-serde-derive-1.0: Update to 1.0.104.

* gnu/packages/crates-io.scm (rust-serde-derive-1.0): Update it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-argon2rs-0.2.
John Soo [Wed, 15 Jan 2020 18:14:43 +0000 (10:14 -0800)]
gnu: Add rust-argon2rs-0.2.

* gnu/packages/crates-io.scm (rust-argon2rs-0.2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-term-size-0.3.
John Soo [Wed, 15 Jan 2020 18:29:33 +0000 (10:29 -0800)]
gnu: Add rust-term-size-0.3.

* gnu/packages/crates-io.scm (rust-term-size-0.3): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-term-size-1.0.
John Soo [Wed, 15 Jan 2020 18:29:08 +0000 (10:29 -0800)]
gnu: Add rust-term-size-1.0.

* gnu/packages/crates-io.scm (rust-term-size-1.0): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-redox-users-0.3.
John Soo [Wed, 15 Jan 2020 18:19:58 +0000 (10:19 -0800)]
gnu: Add rust-redox-users-0.3.

* gnu/packages/crates-io.scm (rust-redox-users-0.3): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-blake2-rfc-0.2.
John Soo [Wed, 15 Jan 2020 18:22:30 +0000 (10:22 -0800)]
gnu: Add rust-blake2-rfc-0.2.

* gnu/packages/crates-io.scm (rust-blake2-rfc-0.2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-dirs-sys-0.3.
John Soo [Wed, 15 Jan 2020 18:14:17 +0000 (10:14 -0800)]
gnu: Add rust-dirs-sys-0.3.

* gnu/packages/crates-io.scm (rust-dirs-sys-0.3): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-serde-yaml-0.8: Update to 0.8.11.
John Soo [Wed, 15 Jan 2020 18:01:02 +0000 (10:01 -0800)]
gnu: rust-serde-yaml-0.8: Update to 0.8.11.

* gnu/packages/crates-io.scm (rust-serde-yaml-0.8): Update to 0.8.11.
[arguments]: Remove rust-version-sync-0.8 from cargo-development-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-serde-json-1.0: Update to 1.0.44.
John Soo [Wed, 15 Jan 2020 17:59:34 +0000 (09:59 -0800)]
gnu: rust-serde-json-1.0: Update to 1.0.44.

* gnu/packages/crates-io.scm (rust-serde-json-1.0): Update to 1.0.44.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-serde-cbor-0.10: Update to 0.10.2.
John Soo [Wed, 15 Jan 2020 17:56:41 +0000 (09:56 -0800)]
gnu: rust-serde-cbor-0.10: Update to 0.10.2.

* gnu/packages/crates-io.scm (rust-serde-cbor-0.10): Update 0.10.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: rust-serde-1.0: Update to 1.0.104.
John Soo [Wed, 15 Jan 2020 17:55:46 +0000 (09:55 -0800)]
gnu: rust-serde-1.0: Update to 1.0.104.

* gnu/packages/crates-io.scm (rust-serde-1.0): Update to 1.0.104.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-dirs-2.0.
John Soo [Wed, 15 Jan 2020 17:52:36 +0000 (09:52 -0800)]
gnu: Add rust-dirs-2.0.

* gnu/packages/crates-io.scm (rust-dirs-2.0): New variable.
(rust-dirs-1.0): Inherit from rust-dirs-2.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-regex-1.3.
John Soo [Wed, 15 Jan 2020 17:42:35 +0000 (09:42 -0800)]
gnu: Add rust-regex-1.3.

* gnu/packages/crates-io.scm (rust-regex-1.3): New variable.
(rust-regex-1.1): Inherit from rust-regex-1.3.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: Add rust-handlebars-2.0.
John Soo [Wed, 15 Jan 2020 17:34:03 +0000 (09:34 -0800)]
gnu: Add rust-handlebars-2.0.

* gnu/packages/crates-io.scm (rust-handlebars-2.0): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agoservices: sane: Create the "scanner" account.
Ludovic Courtès [Tue, 21 Jan 2020 13:26:41 +0000 (14:26 +0100)]
services: sane: Create the "scanner" account.

* gnu/services/desktop.scm (%sane-accounts, sane-service-type): New
variables.
(%desktop-services): Use SANE-SERVICE-TYPE instead of 'simple-service'.
* doc/guix.texi (Desktop Services): Document 'sane-service-type'.

4 years agognu: upower: Install 'dbus-1/system.d/org.freedesktop.UPower.conf' to etc/.
Ludovic Courtès [Tue, 21 Jan 2020 12:56:06 +0000 (13:56 +0100)]
gnu: upower: Install 'dbus-1/system.d/org.freedesktop.UPower.conf' to etc/.

Fixes <https://bugs.gnu.org/39203>.
Reported by Jesse Gibbons <jgibbons2357@gmail.com>.

* gnu/packages/gnome.scm (upower)[source]: Add 'modules' and 'snippet'.

4 years agognu: Use HTTPS for (gnu packages bioinformatics) home pages.
Tobias Geerinckx-Rice [Tue, 21 Jan 2020 00:59:49 +0000 (01:59 +0100)]
gnu: Use HTTPS for (gnu packages bioinformatics) home pages.

* gnu/packages/bioinformatics (bamm, ribodiff, python-biopython)
(discrover, hisat, hisat2, htseq, fastqc, htslib, python2-pbcore, roary)
(sortmerna, r-qtl, multiqc, r-deseq, r-fastseg, sambamba, trim-galore)
(gess, kentutils, bismark, kallisto, sailfish, python-hicexplorer)
(pplacer, python2-checkm-genome, r-velocyto)[home-page]: Use HTTPS.

4 years agognu: r-gage: Update home page.
Tobias Geerinckx-Rice [Tue, 21 Jan 2020 00:47:30 +0000 (01:47 +0100)]
gnu: r-gage: Update home page.

* gnu/packages/bioinformatics.scm (r-gage)[home-page]: Update.

4 years agognu: sra-tools: Update home page.
Tobias Geerinckx-Rice [Tue, 21 Jan 2020 00:44:54 +0000 (01:44 +0100)]
gnu: sra-tools: Update home page.

* gnu/packages/bioinformatics.scm (sra-tools)[home-page]: Update.

4 years agognu: raxml: Update home page.
Tobias Geerinckx-Rice [Tue, 21 Jan 2020 00:43:36 +0000 (01:43 +0100)]
gnu: raxml: Update home page.

* gnu/packages/bioinformatics.scm (raxml)[home-page]: Update.

4 years agognu: prodigal: Update home page.
Tobias Geerinckx-Rice [Tue, 21 Jan 2020 00:41:59 +0000 (01:41 +0100)]
gnu: prodigal: Update home page.

* gnu/packages/bioinformatics.scm (prodigal)[home-page]: Use source code repository as home page.

4 years agognu: miso: Update home page.
Tobias Geerinckx-Rice [Tue, 21 Jan 2020 00:32:10 +0000 (01:32 +0100)]
gnu: miso: Update home page.

* gnu/packages/bioinformatics.scm (miso)[home-page]: Update.

4 years agognu: grit: Update home page.
Tobias Geerinckx-Rice [Tue, 21 Jan 2020 00:28:41 +0000 (01:28 +0100)]
gnu: grit: Update home page.

* gnu/packages/bioinformatics.scm (grit)[home-page]: Use source code
repository as home page.