jackhill/guix/guix.git
4 years agognu: r-atacseqqc: Update to 1.10.3.
Ricardo Wurmus [Sun, 8 Mar 2020 14:57:29 +0000 (15:57 +0100)]
gnu: r-atacseqqc: Update to 1.10.3.

* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.10.3.
[native-inputs]: Add r-knitr.

4 years agognu: Reword and extend descriptions for some KDE packages.
Hartmut Goebel [Sun, 1 Mar 2020 16:13:49 +0000 (17:13 +0100)]
gnu: Reword and extend descriptions for some KDE packages.

* gnu/packages/kde-multimedia.scm (libkcompatdisc)[description]: Extend.
* gnu/packages/kde-pim.scm (akonadi-search, kalarmcal, kdemailimporter,
  kdepim-apps-libs, kidentitymanagement, kldap, kmailtransport, kmbox, kmime,
  kontactinterface, kpimtextedit)[description]: Reword and extend.
  (ktnef, kpimcommon, libkdepim)[synopsis, description]: Reword and extend.
  (kmailtransport)[synopsis]: Fix space.
* gnu/packages/kde-systemtools.scm (khelpcenter)[description]: Extend.

4 years agognu: Add emacs-org-journal.
Martin Becze [Sun, 8 Mar 2020 10:19:16 +0000 (11:19 +0100)]
gnu: Add emacs-org-journal.

* gnu/packages/emacs-xyz.scm (emacs-org-journal): New Variable.

4 years agognu: python-umap-learn: Fix build.
Roel Janssen [Sun, 8 Mar 2020 09:18:39 +0000 (10:18 +0100)]
gnu: python-umap-learn: Fix build.

* gnu/packages/machine-learning.scm (python-umap-learn): Add python-joblib to
  run the test suite.

4 years agoservices: nfs: Run rpc.mountd in foreground.
Maxim Cournoyer [Sun, 8 Mar 2020 04:58:39 +0000 (23:58 -0500)]
services: nfs: Run rpc.mountd in foreground.

Fixes <https://bugs.gnu.org/39708>.

Shepherd doesn't keep track of processes that fork themselves and would
disable the process after restarting it a couple times.

* gnu/services/nfs.scm (nfs-shepherd-services): Invoke rpc.mountd with the
'--foreground' option.

4 years agognu: QEMU: Fix CVE-2020-8608.
Leo Famulari [Sat, 7 Mar 2020 13:30:52 +0000 (08:30 -0500)]
gnu: QEMU: Fix CVE-2020-8608.

* gnu/packages/patches/qemu-CVE-2020-8608.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/virtualization.scm (qemu)[source]: Use it.

4 years agognu: brotli: Remove package
Lars-Dominik Braun [Wed, 4 Mar 2020 09:48:45 +0000 (10:48 +0100)]
gnu: brotli: Remove package

Same package is provided by google-brotli.

* gnu/packages/compression.scm (brotli): Redefine as a deprecated alias
for "google-brotli".

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
4 years agognu: woff2: Update to 1.0.2
Lars-Dominik Braun [Wed, 4 Mar 2020 09:46:36 +0000 (10:46 +0100)]
gnu: woff2: Update to 1.0.2

* gnu/packages/fontutils.scm (woff2): Update to 1.0.2 and switch to cmake
* gnu/packages/patches/woff2-libbrotli.patch: Remove
* gnu/local.mk (dist_patch_DATA): Remove patch

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
4 years agognu: ccache: Fix indentation
Vincent Legoll [Wed, 4 Mar 2020 17:38:59 +0000 (18:38 +0100)]
gnu: ccache: Fix indentation

* gnu/packages/ccache.scm (ccache): Fix indentation

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
4 years agognu: ccache: Update to 3.7.7.
Vincent Legoll [Wed, 4 Mar 2020 17:29:00 +0000 (18:29 +0100)]
gnu: ccache: Update to 3.7.7.

gnu/packages/ccache.scm (ccache): Update to 3.7.7, update homepage
to ccache.dev, get source code from github, remove fortran 77 from
description.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
4 years agognu: eudev: Add variant with corrected Btrfs rules.
Ludovic Courtès [Sat, 7 Mar 2020 20:57:03 +0000 (21:57 +0100)]
gnu: eudev: Add variant with corrected Btrfs rules.

Discussed at <https://bugs.gnu.org/39926>.

* gnu/packages/linux.scm (eudev/btrfs-fix): New variable.
* gnu/services/base.scm (<udev-configuration>)[udev]: Default to it.
(udev-service): Likewise for #:udev.

4 years agognu: guile: Add 2.2.7.
Ludovic Courtès [Sat, 7 Mar 2020 20:42:34 +0000 (21:42 +0100)]
gnu: guile: Add 2.2.7.

* gnu/packages/guile.scm (guile-2.2.7): New variable.
(guile-2.2/bug-fix): Redefine as a deprecated alias for GUILE-2.2.7.
* gnu/packages/admin.scm (shepherd)[native-inputs, inputs]: Use GUILE-2.2.7.
* gnu/packages/patches/guile-finalization-crash.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove it.

4 years agognu: emacs-xr: Update to 1.17.
Nicolas Goaziou [Sat, 7 Mar 2020 20:42:45 +0000 (21:42 +0100)]
gnu: emacs-xr: Update to 1.17.

* gnu/packages/emacs-xyz.scm (emacs-xr): Update to 1.17.

4 years agognu: emacs-relint: Update to 1.15.
Nicolas Goaziou [Sat, 7 Mar 2020 20:41:06 +0000 (21:41 +0100)]
gnu: emacs-relint: Update to 1.15.

* gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.15.

4 years agognu: r-dplyr: Update to 0.8.5.
Ricardo Wurmus [Sat, 7 Mar 2020 19:03:55 +0000 (20:03 +0100)]
gnu: r-dplyr: Update to 0.8.5.

* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.5.
[native-inputs]: Add r-knitr.

4 years agognu: r-survival: Update to 3.1-11.
Ricardo Wurmus [Sat, 7 Mar 2020 19:03:43 +0000 (20:03 +0100)]
gnu: r-survival: Update to 3.1-11.

* gnu/packages/statistics.scm (r-survival): Update to 3.1-11.

4 years agognu: r-lifecycle: Update to 0.2.0.
Ricardo Wurmus [Sat, 7 Mar 2020 19:03:32 +0000 (20:03 +0100)]
gnu: r-lifecycle: Update to 0.2.0.

* gnu/packages/cran.scm (r-lifecycle): Update to 0.2.0.
[native-inputs]: Add r-knitr.

4 years agognu: r-covr: Update to 3.5.0.
Ricardo Wurmus [Sat, 7 Mar 2020 19:03:21 +0000 (20:03 +0100)]
gnu: r-covr: Update to 3.5.0.

* gnu/packages/cran.scm (r-covr): Update to 3.5.0.
[native-inputs]: Add r-knitr.

4 years agognu: r-pscl: Update to 1.5.5.
Ricardo Wurmus [Sat, 7 Mar 2020 19:03:11 +0000 (20:03 +0100)]
gnu: r-pscl: Update to 1.5.5.

* gnu/packages/cran.scm (r-pscl): Update to 1.5.5.

4 years agognu: r-mosaic: Add r-knitr.
Ricardo Wurmus [Sat, 7 Mar 2020 19:02:52 +0000 (20:02 +0100)]
gnu: r-mosaic: Add r-knitr.

* gnu/packages/cran.scm (r-mosaic)[native-inputs]: Add r-knitr.

4 years agognu: r-insight: Update to 0.8.2.
Ricardo Wurmus [Sat, 7 Mar 2020 19:02:35 +0000 (20:02 +0100)]
gnu: r-insight: Update to 0.8.2.

* gnu/packages/cran.scm (r-insight): Update to 0.8.2.
[native-inputs]: Add r-knitr.

4 years agognu: r-heatmaply: Add r-knitr.
Ricardo Wurmus [Sat, 7 Mar 2020 19:02:14 +0000 (20:02 +0100)]
gnu: r-heatmaply: Add r-knitr.

* gnu/packages/cran.scm (r-heatmaply)[native-inputs]: Add r-knitr.

4 years agognu: r-methylkit: Add r-knitr.
Ricardo Wurmus [Sat, 7 Mar 2020 18:42:34 +0000 (19:42 +0100)]
gnu: r-methylkit: Add r-knitr.

* gnu/packages/bioinformatics.scm (r-methylkit)[native-inputs]: Add r-knitr.

4 years agognu: r-ggrepel: Add r-knitr.
Ricardo Wurmus [Sat, 7 Mar 2020 18:38:31 +0000 (19:38 +0100)]
gnu: r-ggrepel: Add r-knitr.

* gnu/packages/cran.scm (r-ggrepel)[native-inputs]: Add r-knitr.

4 years agoimport/cran: Add vignette builder to native inputs.
Ricardo Wurmus [Sat, 7 Mar 2020 18:30:51 +0000 (19:30 +0100)]
import/cran: Add vignette builder to native inputs.

* guix/import/cran.scm (needs-knitr?): New procedure.
(description->package): Use it.

4 years agognu: r-multiassayexperiment: Update to 1.12.4.
Ricardo Wurmus [Sat, 7 Mar 2020 18:30:27 +0000 (19:30 +0100)]
gnu: r-multiassayexperiment: Update to 1.12.4.

* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.4.

4 years agognu: r-depecher: Update to 1.2.2.
Ricardo Wurmus [Sat, 7 Mar 2020 18:30:10 +0000 (19:30 +0100)]
gnu: r-depecher: Update to 1.2.2.

* gnu/packages/bioconductor.scm (r-depecher): Update to 1.2.2.
[native-inputs]: Add r-knitr.

4 years agognu: r-xcms: Update to 3.8.2.
Ricardo Wurmus [Sat, 7 Mar 2020 18:29:59 +0000 (19:29 +0100)]
gnu: r-xcms: Update to 3.8.2.

* gnu/packages/bioconductor.scm (r-xcms): Update to 3.8.2.

4 years agognu: r-yamss: Update to 1.12.1.
Ricardo Wurmus [Sat, 7 Mar 2020 18:29:52 +0000 (19:29 +0100)]
gnu: r-yamss: Update to 1.12.1.

* gnu/packages/bioconductor.scm (r-yamss): Update to 1.12.1.

4 years agognu: r-viridis: Add r-knitr.
Ricardo Wurmus [Sat, 7 Mar 2020 18:29:29 +0000 (19:29 +0100)]
gnu: r-viridis: Add r-knitr.

* gnu/packages/statistics.scm (r-viridis)[native-inputs]: Add r-knitr.

4 years agognu: r-vsn: Add r-knitr.
Ricardo Wurmus [Sat, 7 Mar 2020 18:28:59 +0000 (19:28 +0100)]
gnu: r-vsn: Add r-knitr.

* gnu/packages/bioinformatics.scm (r-vsn)[native-inputs]: Add r-knitr.

4 years agofd: Install bash completion properly.
Michael Rohleder [Sat, 7 Mar 2020 17:32:27 +0000 (18:32 +0100)]
fd: Install bash completion properly.

* gnu/packages/rust-apps.scm (fd)[arguments]: Replace
  the dash in "bash-completion.d" with an underscore.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
4 years agognu: anki: Fix mpv audio playback
Robert Smith [Fri, 6 Mar 2020 16:00:19 +0000 (17:00 +0100)]
gnu: anki: Fix mpv audio playback

* gnu/packages/patches/anki-mpv-args.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/education.scm (anki): Adjust accordingly, wrap anki's
  PATH to include mpv executable.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
4 years agognu: next: Fix build with SBCL 2.0.2.
Pierre Neidhardt [Sat, 7 Mar 2020 16:11:49 +0000 (17:11 +0100)]
gnu: next: Fix build with SBCL 2.0.2.

* gnu/packages/web-browsers.scm (next)[arguments]: Fix lambda-list type error
  on SBCL 2.0.2.

4 years agognu: s6-rc: Update to 0.5.1.2.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 14:31:50 +0000 (15:31 +0100)]
gnu: s6-rc: Update to 0.5.1.2.

* gnu/packages/skarnet.scm (s6-rc): Update to 0.5.1.2.

4 years agognu: s6-portable-utils: Update to 2.2.2.2.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 14:30:49 +0000 (15:30 +0100)]
gnu: s6-portable-utils: Update to 2.2.2.2.

* gnu/packages/skarnet.scm (s6-portable-utils): Update to 2.2.2.2.

4 years agognu: s6-networking: Update to 2.3.1.2.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 14:28:45 +0000 (15:28 +0100)]
gnu: s6-networking: Update to 2.3.1.2.

* gnu/packages/skarnet.scm (s6-networking): Update to 2.3.1.2.

4 years agognu: s6-linux-utils: Update to 2.5.1.2.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 14:12:38 +0000 (15:12 +0100)]
gnu: s6-linux-utils: Update to 2.5.1.2.

* gnu/packages/skarnet.scm (s6-linux-utils): Update to 2.5.1.2.

4 years agognu: scm: Update to 5f3.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 14:06:59 +0000 (15:06 +0100)]
gnu: scm: Update to 5f3.

* gnu/packages/scheme.scm (scm): Update to 5f3.

4 years agognu: ntp: Update to 4.2.8p14 [fixes Sec 3610, Sec 3596, Sec 3592].
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 14:55:34 +0000 (15:55 +0100)]
gnu: ntp: Update to 4.2.8p14 [fixes Sec 3610, Sec 3596, Sec 3592].

https://support.ntp.org/bin/view/Main/SecurityNotice#Recent_Vulnerabilities

* gnu/packages/ntp.scm (ntp): Update to 4.2.8p14.

4 years agognu: ntp: Use HTTPS in metadata URIs
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 14:55:02 +0000 (15:55 +0100)]
gnu: ntp: Use HTTPS in metadata URIs

* gnu/packages/ntp.scm (ntp)[home-page, license]: Use HTTPS.

4 years agognu: unbound: Update to 1.10.0.
Vincent Legoll [Thu, 5 Mar 2020 15:43:06 +0000 (16:43 +0100)]
gnu: unbound: Update to 1.10.0.

* gnu/packages/dns.scm (unbound): Update to 1.10.0.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
4 years agognu: ppp: Update to 2.4.8-1.8d45443 [fixes CVE-2020-8597].
Vincent Legoll [Sat, 7 Mar 2020 13:10:37 +0000 (14:10 +0100)]
gnu: ppp: Update to 2.4.8-1.8d45443 [fixes CVE-2020-8597].

* gnu/packages/samba.scm (ppp): Update to 2.4.8-1.8d45443.
Use GIT-FETCH and GIT-FILE-NAME.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
4 years agognu: Use HTTPS for commons.apache.org home pages.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:50:33 +0000 (22:50 +0100)]
gnu: Use HTTPS for commons.apache.org home pages.

* gnu/packages/java.scm (java-commons-io, java-commons-logging-minimal)
(java-commons-math3, java-commons-jxpath, java-commons-daemon)
(java-commons-net, java-commons-vfs, java-commons-beanutils)
(java-commons-lang, java-commons-lang3)[home-page]:Use HTTPS.

4 years agognu: java-joda-convert: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:21:10 +0000 (22:21 +0100)]
gnu: java-joda-convert: Use HTTPS home page.

* gnu/packages/java.scm (java-joda-convert)[home-page]: Use HTTPS.

4 years agognu: java-log4j-1.2-api: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:19:56 +0000 (22:19 +0100)]
gnu: java-log4j-1.2-api: Use HTTPS home page.

* gnu/packages/java.scm (java-log4j-1.2-api)[home-page]: Use HTTPS.

4 years agognu: java-testng: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:17:21 +0000 (22:17 +0100)]
gnu: java-testng: Use HTTPS home page.

* gnu/packages/java.scm (java-testng)[home-page]: Use HTTPS.

4 years agognu: java-junit: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:12:45 +0000 (22:12 +0100)]
gnu: java-junit: Use HTTPS home page.

* gnu/packages/java.scm (java-junit)[home-page]: Use HTTPS.

4 years agognu: java-openchart2: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:24:47 +0000 (22:24 +0100)]
gnu: java-openchart2: Use HTTPS home page.

* gnu/packages/java.scm (java-openchart2)[home-page]: Use HTTPS.

4 years agognu: raincat: Update home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:41:06 +0000 (22:41 +0100)]
gnu: raincat: Update home page.

* gnu/packages/haskell-apps.scm (raincat)[home-page]: Update.

4 years agognu: instantmusic: Update home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:39:33 +0000 (22:39 +0100)]
gnu: instantmusic: Update home page.

* gnu/packages/music.scm (instantmusic)[home-page]: Update.

4 years agognu: openblas: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:38:41 +0000 (22:38 +0100)]
gnu: openblas: Use HTTPS home page.

* gnu/packages/maths.scm (openblas)[home-page]: Use HTTPS.

4 years agognu: python-execnet: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:35:13 +0000 (22:35 +0100)]
gnu: python-execnet: Use HTTPS home page.

* gnu/packages/python-xyz.scm (python-execnet)[home-page]: Use HTTPS.

4 years agognu: emacs-ffap-rfc-space: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:33:11 +0000 (22:33 +0100)]
gnu: emacs-ffap-rfc-space: Use HTTPS home page.

* gnu/packages/emacs-xyz.scm (emacs-ffap-rfc-space)[home-page]: Use HTTPS.

4 years agognu: librecad: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:10:47 +0000 (22:10 +0100)]
gnu: librecad: Use HTTPS home page.

* gnu/packages/engineering.scm (librecad)[home-page]: Use HTTPS.

4 years agognu: spice: Update to 0.14.3.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 11:02:22 +0000 (12:02 +0100)]
gnu: spice: Update to 0.14.3.

* gnu/packages/spice.scm (spice): Update to 0.14.3.
[source]: Remove obsolete patch.
* gnu/packages/patches/spice-fix-test-armhf.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

4 years agognu: xfce4-weather-plugin: Update to 0.10.1.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 10:54:00 +0000 (11:54 +0100)]
gnu: xfce4-weather-plugin: Update to 0.10.1.

* gnu/packages/xfce.scm (xfce4-weather-plugin): Update to 0.10.1.

4 years agognu: xfce4-clipman-plugin: Update to 1.4.4.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 10:52:57 +0000 (11:52 +0100)]
gnu: xfce4-clipman-plugin: Update to 1.4.4.

* gnu/packages/xfce.scm (xfce4-clipman-plugin): Update to 1.4.4.

4 years agognu: xfce4-clipman-plugin: Don't use NAME in source URI.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 10:52:42 +0000 (11:52 +0100)]
gnu: xfce4-clipman-plugin: Don't use NAME in source URI.

* gnu/packages/xfce.scm (xfce4-clipman-plugin)[source]: Hard-code NAME.

4 years agognu: fmt: Switch back to url-fetch.
Pierre Neidhardt [Sat, 7 Mar 2020 11:35:32 +0000 (12:35 +0100)]
gnu: fmt: Switch back to url-fetch.

* gnu/packages/pretty-print.scm (fmt)[source]: Use url-fetch instead of
  git-fetch since upstream uploads releases.  Both approaches produce the
  same package, but git-fetch requires more bandwidth.

4 years agognu: cl-dbus: Remove unneeded inputs.
Pierre Neidhardt [Sat, 7 Mar 2020 10:30:11 +0000 (11:30 +0100)]
gnu: cl-dbus: Remove unneeded inputs.

* gnu/packages/lisp-xyz.scm (cl-dbus)[propagated-inputs]: Remove iolib
  subpackages now that iolib properly references them.

4 years agognu: sbcl-iolib: Fix build to refer to its subpackages properly.
Pierre Neidhardt [Sat, 7 Mar 2020 10:28:32 +0000 (11:28 +0100)]
gnu: sbcl-iolib: Fix build to refer to its subpackages properly.

* gnu/packages/lisp-xyz.scm (sbcl-iolib): Inherit from its subpackages instead
  of the other way around, so that they are automatically referenced in the
  generated .asd.

4 years agognu: go-golang.org-x-sync-errgroup: Fix spelling of "cancellation".
Vagrant Cascadian [Sat, 7 Mar 2020 04:05:50 +0000 (20:05 -0800)]
gnu: go-golang.org-x-sync-errgroup: Fix spelling of "cancellation".

* gnu/packages/golang (go-golang.org-x-sync-errgroup)[synopsis]: Fix typo.

4 years agognu: rust-named-pipe-0.4: Fix spelling of "asynchronous"
Vagrant Cascadian [Sat, 7 Mar 2020 04:03:00 +0000 (20:03 -0800)]
gnu: rust-named-pipe-0.4: Fix spelling of "asynchronous"

* gnu/packages/crates-io (rust-named-pipe-0.4)[synopsis]: Fix typo.
  [description]: Fix typo.

4 years agognu: r-d3network: Fix typo "This package".
Vagrant Cascadian [Sat, 7 Mar 2020 03:58:28 +0000 (19:58 -0800)]
gnu: r-d3network: Fix typo "This package".

* gnu/packages/cran (r-d3network)[description]: Fix typo.

4 years agognu: ksystemlog: Fix spelling of "occurring".
Vagrant Cascadian [Sat, 7 Mar 2020 03:55:38 +0000 (19:55 -0800)]
gnu: ksystemlog: Fix spelling of "occurring".

* gnu/packages/kde-sytemtools (ksystemlog)[description]: Fix typo.

4 years agognu: unicode-cldr-common: Fix spelling of "information".
Vagrant Cascadian [Sat, 7 Mar 2020 03:49:10 +0000 (19:49 -0800)]
gnu: unicode-cldr-common: Fix spelling of "information".

* gnu/packages/unicode (unicode-cldr-common)[description]: Fix typo.

4 years agognu: sdl-pango: Rename patch to fix guix lint warning about patch filename size.
Vagrant Cascadian [Sat, 7 Mar 2020 00:50:23 +0000 (16:50 -0800)]
gnu: sdl-pango: Rename patch to fix guix lint warning about patch filename size.

* gnu/packages/patches/sdl-pango-fix-explicit-SDLPango_CopyFTBitmapToSurface.patch:
  Rename to ...
* gnu/packages/patches/sdl-pango-fix-explicit-SDLPango_CopyFTBitmapTo.patch:
  ... this.
* gnu/local.mk: Update accordingly.
* gnu/packages/sdl.scm: Update accordingly.

4 years agognu: akonadi: Rename patch to fix guix lint warning about patch filename size.
Vagrant Cascadian [Sat, 7 Mar 2020 00:43:18 +0000 (16:43 -0800)]
gnu: akonadi: Rename patch to fix guix lint warning about patch filename size.

* gnu/packages/patches/akonadi-Revert-Make-installation-properly-relocatabl.patch:
  Rename to ...
* gnu/packages/patches/akonadi-Revert-Make-installation-properly-relo.patch:
  ... this.
* gnu/packages/kde-pim (akonadi) Update accordingly.
* gnu/local.mk: Update accordingly.

4 years agognu: yasm: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:01:23 +0000 (22:01 +0100)]
gnu: yasm: Use HTTPS home page.

* gnu/packages/assembly.scm (yasm)[home-page]: Use HTTPS.

4 years agognu: jq: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 20:59:22 +0000 (21:59 +0100)]
gnu: jq: Use HTTPS home page.

* gnu/packages/web.scm (jq)[home-page]: Use HTTPS.

4 years agognu: xerces-c: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:36:01 +0000 (22:36 +0100)]
gnu: xerces-c: Use HTTPS home page.

* gnu/packages/xml.scm (xerces-c)[home-page]: Use HTTPS.

4 years agognu: ytalk: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:15:47 +0000 (22:15 +0100)]
gnu: ytalk: Use HTTPS home page.

* gnu/packages/messaging.scm (ytalk)[home-page]: Use HTTPS.

4 years agognu: re2c: Use HTTPS home page.
Tobias Geerinckx-Rice [Sat, 18 Jan 2020 21:09:27 +0000 (22:09 +0100)]
gnu: re2c: Use HTTPS home page.

* gnu/packages/re2c.scm (re2c)[home-page]: Use HTTPS.

4 years agognu: zimg: Update to 2.9.3.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 00:37:17 +0000 (01:37 +0100)]
gnu: zimg: Update to 2.9.3.

* gnu/packages/image.scm (zimg): Update to 2.9.3.

4 years agognu: bluefish: Update to 2.2.11.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 00:36:30 +0000 (01:36 +0100)]
gnu: bluefish: Update to 2.2.11.

* gnu/packages/gnome.scm (bluefish): Update to 2.2.11.
[inputs]: Replace python-2 with python-wrapper.

4 years agognu: bluefish: Don't use NAME in source URI.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 00:36:18 +0000 (01:36 +0100)]
gnu: bluefish: Don't use NAME in source URI.

* gnu/packages/gnome.scm (bluefish)[source]: Hard-code NAME.

4 years agognu: rhythmbox: Update to 3.4.4.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 00:36:06 +0000 (01:36 +0100)]
gnu: rhythmbox: Update to 3.4.4.

* gnu/packages/gnome.scm (rhythmbox): Update to 3.4.4.

4 years agognu: rhythmbox: Don't use NAME in source URI.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 00:35:24 +0000 (01:35 +0100)]
gnu: rhythmbox: Don't use NAME in source URI.

* gnu/packages/gnome.scm (rhythmbox)[source]: Hard-code NAME.

4 years agognu: knot: Update to 2.9.3.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 00:34:57 +0000 (01:34 +0100)]
gnu: knot: Update to 2.9.3.

* gnu/packages/dns.scm (knot): Update to 2.9.3.

4 years agognu: hplip: Update to 3.20.2.
Tobias Geerinckx-Rice [Sat, 7 Mar 2020 00:34:46 +0000 (01:34 +0100)]
gnu: hplip: Update to 3.20.2.

* gnu/packages/cups.scm (hplip): Update to 3.20.2.

4 years agognu: gkrellm: Update to 2.3.11.
Tobias Geerinckx-Rice [Fri, 6 Mar 2020 23:39:33 +0000 (00:39 +0100)]
gnu: gkrellm: Update to 2.3.11.

* gnu/packages/gkrellm.scm (gkrellm): Update to 2.3.11.

4 years agodoc: Fix build of German Cookbook translation.
Florian Pelz [Fri, 6 Mar 2020 20:32:59 +0000 (21:32 +0100)]
doc: Fix build of German Cookbook translation.

This is a follow-up to f98e83a17fa30587520e858231ec9c61f3624ecd.
See <https://lists.gnu.org/archive/html/guix-devel/2020-03/msg00095.html>.
Reported there by Vagrant Cascadian <vagrant@debian.org>.

* po/doc/local.mk (DOC_COOKBOOK_PO_FILES): Use correct file name.
(doc-po-update-cookbook-%): Use correct PO file name.

4 years agognu: wxmaxima: Update to 20.02.4.
Kei Kebreau [Mon, 2 Mar 2020 15:18:52 +0000 (10:18 -0500)]
gnu: wxmaxima: Update to 20.02.4.

* gnu/packages/maths.scm (wxmaxima): Update to 20.02.4.
[arguments]: Enable tests and set #:test-target to "test".
[native-inputs]: Add xorg-server-for-tests.

4 years agognu: linux-libre: Update to 5.4.24.
Mark H Weaver [Fri, 6 Mar 2020 19:20:30 +0000 (14:20 -0500)]
gnu: linux-libre: Update to 5.4.24.

* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.24.
(linux-libre-5.4-pristine-source): Update hash.

4 years agognu: linux-libre@4.19: Update to 4.19.108.
Mark H Weaver [Fri, 6 Mar 2020 19:19:34 +0000 (14:19 -0500)]
gnu: linux-libre@4.19: Update to 4.19.108.

* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.108.
(linux-libre-4.19-pristine-source): Update hash.

4 years agognu: ungoogled-chromium: Increase max-silent-time.
Marius Bakke [Fri, 6 Mar 2020 13:37:39 +0000 (14:37 +0100)]
gnu: ungoogled-chromium: Increase max-silent-time.

* gnu/packages/chromium.scm (ungoogled-chromium)[properties]: Add
'max-silent-time'.

4 years agognu: mercurial: Update to 5.3.1.
Marius Bakke [Fri, 6 Mar 2020 10:14:28 +0000 (11:14 +0100)]
gnu: mercurial: Update to 5.3.1.

* gnu/packages/version-control.scm (mercurial): Update to 5.3.1.
[native-inputs]: Add WHICH.

4 years agoDo not record store file name in cpp.scm.
Vagrant Cascadian [Fri, 6 Mar 2020 16:22:15 +0000 (08:22 -0800)]
Do not record store file name in cpp.scm.

* gnu/packages/cpp.scm (abseil-cpp): Replace full store file name with '...'

4 years agognu: carla: Fix start-up.
Tobias Geerinckx-Rice [Fri, 6 Mar 2020 15:28:32 +0000 (16:28 +0100)]
gnu: carla: Fix start-up.

This fixes <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=39942>,
properly.

* gnu/packages/audio.scm (carla)[arguments]: Add ‘wrap-executables’ phase.
[inputs]: Add guile-2.2.

4 years agognu: fmt: Fix home page.
Tobias Geerinckx-Rice [Fri, 6 Mar 2020 15:23:26 +0000 (16:23 +0100)]
gnu: fmt: Fix home page.

* gnu/packages/pretty-print.scm (fmt)[home-page]: Update.

4 years agognu: Order module imports in (gnu packages audio).
Tobias Geerinckx-Rice [Fri, 6 Mar 2020 14:39:20 +0000 (15:39 +0100)]
gnu: Order module imports in (gnu packages audio).

* gnu/packages/audio.scm: Order module imports alphabetically.

4 years agognu: carla: Partially fix start-up.
Tobias Geerinckx-Rice [Fri, 6 Mar 2020 14:01:08 +0000 (15:01 +0100)]
gnu: carla: Partially fix start-up.

This fixes <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=39942> but
carla still fails to start.

Reported by Nathan Dehnel <ncdehnel@gmail.com>.

* gnu/packages/audio.scm (carla)[arguments]: Add ‘make-carla-executable’ phase.

4 years agognu: dovecot: Update to 2.3.10.
Tobias Geerinckx-Rice [Fri, 6 Mar 2020 11:32:30 +0000 (12:32 +0100)]
gnu: dovecot: Update to 2.3.10.

* gnu/packages/mail.scm (dovecot): Update to 2.3.10.

4 years agognu: Add gnome-boxes.
Pierre Neidhardt [Fri, 6 Mar 2020 11:19:15 +0000 (12:19 +0100)]
gnu: Add gnome-boxes.

* gnu/packages/gnome.scm (gnome-boxes): New variable.

4 years agognu: tracker-miners: Update to 2.3.2.
Pierre Neidhardt [Fri, 6 Mar 2020 11:40:54 +0000 (12:40 +0100)]
gnu: tracker-miners: Update to 2.3.2.

* gnu/packages/gnome.scm (tracker-miners): Update to 2.3.2.

4 years agognu: tracker: Update to 2.3.2.
Pierre Neidhardt [Fri, 6 Mar 2020 11:45:12 +0000 (12:45 +0100)]
gnu: tracker: Update to 2.3.2.

* gnu/packages/gnome.scm (tracker): Update to 2.3.2.
[arguments]: Fix tests properly.
[native-inputs]: Remove unneeded native-inputs.
[inputs]: Remove unneeded inputs.
[description]: Replace unclear description with more down to earth use cases.
[license]: Replace lgpl2.0+ with bsd-3 to reflect update.

4 years agognu: libvirt-glib: Update to 3.0.0.
Pierre Neidhardt [Fri, 6 Mar 2020 10:40:34 +0000 (11:40 +0100)]
gnu: libvirt-glib: Update to 3.0.0.

* gnu/packages/virtualization.scm (libvirt-glib): Update to 3.0.0.

4 years agognu: python-pygit2: Update to 1.1.0.
Marius Bakke [Fri, 6 Mar 2020 10:24:41 +0000 (11:24 +0100)]
gnu: python-pygit2: Update to 1.1.0.

* gnu/packages/python-xyz.scm (python-pygit2): Update to 1.1.0.
[propagated-inputs]: Remove PYTHON-SIX and PYTHON-TOX.  Add PYTHON-CACHED-PROPERTY.
(python2-pygit2): Remove variable (Python 2 is no longer supported).

4 years agognu: gitg: Remove redundant input.
Marius Bakke [Fri, 6 Mar 2020 10:18:47 +0000 (11:18 +0100)]
gnu: gitg: Remove redundant input.

* gnu/packages/gnome.scm (gitg)[inputs]: Remove LIBGIT2.