Ricardo Wurmus [Wed, 29 Apr 2020 11:38:22 +0000 (13:38 +0200)]
gnu: Add python-port-for.
* gnu/packages/python-web.scm (python-port-for): New variable.
Ricardo Wurmus [Wed, 29 Apr 2020 11:37:22 +0000 (13:37 +0200)]
gnu: Add python-restructuredtext-lint.
* gnu/packages/python-xyz.scm (python-restructuredtext-lint): New variable.
Raghav Gururajan [Fri, 10 Jan 2020 13:49:02 +0000 (08:49 -0500)]
gnu: gnome-calendar: Propagate evolution-data-server.
* gnu/packages/gnome.scm (gnome-calendar)[inputs]: Move evolution-data-server
from here...
[propagated-inputs]: ...to here.
Fixes <https://bugs.gnu.org/40686>.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Ricardo Wurmus [Tue, 28 Apr 2020 11:35:51 +0000 (13:35 +0200)]
gnu: Remove python2-ws4py-for-kaldi-gstreamer-server.
* gnu/packages/python-web.scm (python2-ws4py-for-kaldi-gstreamer-server):
Remove variable.
Ricardo Wurmus [Tue, 28 Apr 2020 11:34:22 +0000 (13:34 +0200)]
gnu: kaldi-gstreamer-server: Update to 0-2.
f68cab4.
* gnu/packages/machine-learning.scm (kaldi-gstreamer-server): Update to
0-2.
f68cab4.
[inputs]: Replace python-2 with python-wrapper, python2-pygobject with
python-pygobject, python2-pyyaml with python-pyyaml, and python2-tornado with
python-tornado; remove python2-ws4py-for-kaldi-gstreamer-server and
python2-futures.
Brice Waegeneire [Tue, 28 Apr 2020 09:53:23 +0000 (11:53 +0200)]
gnu: Add edid-decode.
* gnu/packages/hardware.scm (edid-decode): New variable.
Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
Alexandros Theodotou [Tue, 28 Apr 2020 14:55:13 +0000 (15:55 +0100)]
gnu: zrythm: Update to 0.8.333.
* gnu/packages/music.scm (zrythm): Update to 0.8.333.
[inputs]: Add new dependencies graphviz and gtksourceview.
Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
Paul Garlick [Tue, 28 Apr 2020 20:32:56 +0000 (21:32 +0100)]
gnu: ikiwiki: Update to 3.
20200202.3.
* gnu/packages/web.scm (ikiwiki): Update to 3.
20200202.3.
Paul Garlick [Tue, 28 Apr 2020 16:52:21 +0000 (17:52 +0100)]
gnu: ikiwiki: Translate documentation.
* gnu/packages/web.scm (ikiwiki)[inputs]: Add po4a.
[arguments]<#:phases>[patch-Makefile]: Rename to...
[arguments]<#:phases>[patch-Makefiles]: ...this. Add build environment
paths to the PERL5LIB environment variable that is used by the 'po2wiki'
script.
Paul Garlick [Tue, 28 Apr 2020 15:13:55 +0000 (16:13 +0100)]
gnu: ikiwiki: Add missing inputs.
* gnu/packages/web.scm (ikiwiki)[inputs]: Add perl-authen-passphrase,
perl-file-mimeinfo, perl-mail-sendmail and perl-xml-twig.
Paul Garlick [Mon, 27 Apr 2020 10:07:23 +0000 (11:07 +0100)]
gnu: ikiwiki: Propagate some inputs.
* gnu/packages/web.scm (ikiwiki)[inputs]: Move perl-html-parser,
perl-html-scrubber, perl-html-template, perl-json,
perl-text-markdown-discount, perl-uri and perl-yaml-libyaml to...
[propagated-inputs]: ...here. New field.
Paul Garlick [Fri, 24 Apr 2020 19:46:15 +0000 (20:46 +0100)]
gnu: ikiwiki: Build perl inputs for target architecture.
* gnu/packages/web.scm (ikiwiki)[native-inputs]: Move perl dependencies ...
[inputs]: ...to here.
Paul Garlick [Fri, 24 Apr 2020 12:07:07 +0000 (13:07 +0100)]
gnu: ikiwiki: Fetch sources from git repository.
* gnu/packages/web.scm (ikiwiki)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
[source](snippet): New field.
[arguments]<#:phases>[set-modification-times]: New phase.
Guillaume Le Vaillant [Wed, 29 Apr 2020 08:15:57 +0000 (10:15 +0200)]
gnu: gnuradio: Fix search paths for third-party blocks.
* gnu/packages/radio.scm (gnuradio)[native-search-paths]: Add definition of
the GRC_BLOCKS_PATH variable.
Mathieu Othacehe [Wed, 29 Apr 2020 07:24:31 +0000 (09:24 +0200)]
tests: install: Fix gui-installed-os test.
This is a follow-up of
a860eddbbddeae5d3b6fe084e29ac9fafd2d6f02. If using an
ISO, the main disk is vda and not vdb anymore.
* gnu/tests/install.scm (installation-target-os-for-gui-tests): Use vda2 as
swap partition.
Mathieu Othacehe [Wed, 29 Apr 2020 07:11:24 +0000 (09:11 +0200)]
tests: install: Increase virtual machine RAM.
It seems that 'guix system init' is consuming more than the 800M of RAM
currently allocated. Until this is understood, bump the limit to 1.2G.
Reported here:
https://lists.gnu.org/archive/html/bug-guix/2020-04/msg00519.html
* gnu/tests/install.scm (run-install): Bump RAM to 1.2G.
Guillaume Le Vaillant [Tue, 28 Apr 2020 23:11:53 +0000 (01:11 +0200)]
gnu: Add xnec2c.
* gnu/packages/radio.scm (xnec2c): New variable.
Diego Nicola Barbato [Sat, 25 Apr 2020 09:32:07 +0000 (11:32 +0200)]
doc: Mention that PulseAudio service overrides user configuration.
* doc/guix.texi (Sound Services): Add a warning that 'pulseaudio-service-type'
overrides per-user configuration files in '~/.config/pulse'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Ludovic Courtès [Tue, 28 Apr 2020 20:32:06 +0000 (22:32 +0200)]
gnu: guile-json: Update to 3.5.0.
* gnu/packages/guile.scm (guile-json-3): Update to 3.5.0.
Ludovic Courtès [Tue, 28 Apr 2020 20:31:32 +0000 (22:31 +0200)]
gnu: guix: Update to
619f918.
* gnu/packages/package-management.scm (guix): Update to
619f918.
Efraim Flashner [Tue, 28 Apr 2020 19:52:20 +0000 (22:52 +0300)]
gnu: openldap: Fix CVE-2020-12243.
* gnu/packages/openldap.scm (openldap)[replacement]: New field.
(openldap/fixed): New variable.
* gnu/packages/patches/openldap-CVE-2020-12243.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
Efraim Flashner [Tue, 28 Apr 2020 18:07:14 +0000 (21:07 +0300)]
gnu: valgrind: Update source uri.
* gnu/packages/valgrind.scm (valgrind)[source]: Remove valgrind host,
add sourceware host.
[home-page]: Use https.
Pierre Neidhardt [Tue, 28 Apr 2020 19:07:23 +0000 (21:07 +0200)]
gnu: sbcl: Update to 2.0.4.
* gnu/packages/lisp.scm (sbcl): Update to 2.0.4.
Pierre Neidhardt [Tue, 28 Apr 2020 12:48:58 +0000 (14:48 +0200)]
gnu: sbcl-parenscript: Update to 2.7.1.
* gnu/packages/lisp-xyz.scm (sbcl-parenscript): Update to 2.7.1.
Diego Nicola Barbato [Fri, 7 Feb 2020 16:59:31 +0000 (17:59 +0100)]
gnu: emacs-telega: Test Emacs environment on startup.
Print a more helpful error message when someone attempts to run Telega on an
incompatible Emacs (e.g a 32-bit Emacs without wide ints).
* gnu/packages/patches/emacs-telega-test-env.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/emacs-xyz.scm (emacs-telega)[source]: Use it.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Diego Nicola Barbato [Sun, 29 Dec 2019 00:03:38 +0000 (01:03 +0100)]
gnu: emacs-telega: Build with emacs-wide-int on 32-bit systems.
Fixes <https://bugs.gnu.org/39406>.
Reported by <lmedeiros@riseup.net>.
* gnu/packages/emacs-xyz.scm (emacs-telega)[native-inputs]: Replace emacs with
emacs-wide-int on 32-bit systems. This is needed because Telega requires
64-bit wide ints.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Diego Nicola Barbato [Sat, 28 Dec 2019 23:41:48 +0000 (00:41 +0100)]
gnu: Add emacs-wide-int.
* gnu/packages/emacs.scm (emacs-wide-int): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Christopher Lemmer Webber [Thu, 2 Apr 2020 19:03:27 +0000 (15:03 -0400)]
gnu: Add emacs-magit-annex.
* gnu/packages/emacs-xyz.scm (emacs-magit-annex): New variable.
Alexandros Theodotou [Tue, 28 Apr 2020 14:30:04 +0000 (15:30 +0100)]
gnu: lv2: Update to 1.18.0.
* gnu/packages/audio.scm (lv2): Update to 1.18.0.
Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
Nicolas Goaziou [Tue, 28 Apr 2020 16:18:44 +0000 (18:18 +0200)]
gnu: kakoune: Update to 2020.01.16.
* gnu/packages/text-editors.scm (kakoune): Update to 2020.01.16.
John Soo [Mon, 27 Apr 2020 23:27:04 +0000 (16:27 -0700)]
gnu: emacs-evil-org: Update to 1.0.2.
* gnu/packages/emacs-xyz.scm (emacs-evil-org): Update to 1.0.2.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
Joseph LaFreniere [Sun, 26 Apr 2020 21:10:20 +0000 (16:10 -0500)]
gnu: emacs-sx: Update to
20191229.
* gnu/packages/emacs-xyz.scm (emacs-sx): Update to
20191229.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
Joseph LaFreniere [Sun, 26 Apr 2020 16:24:32 +0000 (11:24 -0500)]
gnu: Add emacs-toml-mode.
* gnu/packages/emacs-xyz.scm (emacs-toml-mode): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
Marius Bakke [Tue, 28 Apr 2020 12:38:38 +0000 (14:38 +0200)]
gnu: ungoogled-chromium: Update to 81.0.4044.129-0.
c2a89fb [security fixes].
This fixes CVE-2020-6462 and CVE-2020-6461.
* gnu/packages/chromium.scm (%chromium-version): Set to 81.0.4044.129.
(%ungoogled-revision): Set to
c2a89fb6b5b559c826796c811741fa8ed3e11de8.
(%chromium-origin, %ungoogled-origin): Update hashes.
Ricardo Wurmus [Tue, 28 Apr 2020 10:23:13 +0000 (12:23 +0200)]
gnu: Add variant-tools.
* gnu/packages/bioinformatics.scm (variant-tools): New variable.
Ricardo Wurmus [Tue, 28 Apr 2020 10:20:18 +0000 (12:20 +0200)]
gnu: Add hdf5-blosc.
* gnu/packages/maths.scm (hdf5-blosc): New variable.
Ricardo Wurmus [Tue, 28 Apr 2020 09:22:47 +0000 (11:22 +0200)]
gnu: Add c-blosc.
* gnu/packages/compression.scm (c-blosc): New variable.
Boris A. Dekshteyn [Tue, 28 Apr 2020 02:09:19 +0000 (14:09 +1200)]
gnu: Add kbdd-0.7.1
* gnu/packages/xdisorg.scm (kbdd): New variable.
Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
Pierre Neidhardt [Tue, 28 Apr 2020 09:46:45 +0000 (11:46 +0200)]
gnu: ecl: Update to 20.4.24.
* gnu/packages/lisp.scm (ecl): Update to 20.4.24.
[native-inputs]: Add texinfo to make the manual.
[license]: Set to lgpl2.1+.
Pierre Neidhardt [Tue, 28 Apr 2020 08:46:05 +0000 (10:46 +0200)]
gnu: sbcl-cl-cffi-gtk: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
Pierre Neidhardt [Tue, 28 Apr 2020 08:45:47 +0000 (10:45 +0200)]
gnu: sbcl-cl-cffi-gtk-gdk: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gdk)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
Pierre Neidhardt [Tue, 28 Apr 2020 08:45:32 +0000 (10:45 +0200)]
gnu: sbcl-cl-cffi-gtk-gdk-pixbuf: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gdk-pixbuf)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
Pierre Neidhardt [Tue, 28 Apr 2020 08:45:18 +0000 (10:45 +0200)]
gnu: sbcl-cl-cffi-gtk-pango: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-pango)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
Pierre Neidhardt [Tue, 28 Apr 2020 08:45:05 +0000 (10:45 +0200)]
gnu: sbcl-cl-cffi-gtk-cairo: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-cairo)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
Pierre Neidhardt [Tue, 28 Apr 2020 08:44:47 +0000 (10:44 +0200)]
gnu: sbcl-cl-cffi-gtk-gio: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gio)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
Pierre Neidhardt [Tue, 28 Apr 2020 08:42:44 +0000 (10:42 +0200)]
gnu: sbcl-cl-cffi-gtk-gobject: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gobject)[arguments]: Replace source
folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
Pierre Neidhardt [Tue, 28 Apr 2020 08:37:10 +0000 (10:37 +0200)]
gnu: Add emacs-trashed.
* gnu/packages/emacs-xyz.scm (emacs-trashed): New variable.
Guillaume Le Vaillant [Tue, 28 Apr 2020 08:10:16 +0000 (10:10 +0200)]
gnu: gnuradio-osmosdr: Add hackrf support.
* gnu/packages/radio.scm (gnuradio-osmosdr)[inputs]: Add hackrf.
Christopher Howard [Tue, 28 Apr 2020 08:06:34 +0000 (10:06 +0200)]
gnu: Add hackrf.
* gnu/packages/radio.scm (hackrf): New variable.
Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
Roel Janssen [Tue, 28 Apr 2020 08:11:22 +0000 (10:11 +0200)]
gnu: hpcguix-web: Use guile3.0-guix.
* gnu/packages/web.scm (hpcguix-web): Update to latest revision and use
guile3.0 inputs.
Konrad Hinsen [Fri, 24 Apr 2020 12:36:20 +0000 (14:36 +0200)]
gnu: python-scikit-learn: Make python-joblib a propagated input.
* gnu/packages/machine-learning.scm (python-scikit-learn)
[native-inputs]: Move 'python-joblib' to ...
[propagated-inputs]: ... here.
Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
Ricardo Wurmus [Tue, 28 Apr 2020 06:42:39 +0000 (08:42 +0200)]
gnu: gst-kaldi-nnet2-online: Update to 0-2.
cb227ef.
* gnu/packages/machine-learning.scm (gst-kaldi-nnet2-online): Update to
0-2.
cb227ef.
Ricardo Wurmus [Mon, 27 Apr 2020 22:24:38 +0000 (00:24 +0200)]
gnu: kaldi: Update to 0-2.
d4791c0.
* gnu/packages/machine-learning.scm (kaldi): Update to 0-2.
d4791c0.
Ricardo Wurmus [Mon, 27 Apr 2020 15:31:56 +0000 (17:31 +0200)]
gnu: r-hdf5array: Update to 1.14.4.
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.14.4.
Ricardo Wurmus [Mon, 27 Apr 2020 15:31:42 +0000 (17:31 +0200)]
gnu: r-seurat: Update to 3.1.5.
* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.1.5.
[propagated-inputs]: Remove r-metap.
Ricardo Wurmus [Mon, 27 Apr 2020 15:31:35 +0000 (17:31 +0200)]
gnu: r-topicmodels: Update to 0.2-11.
* gnu/packages/cran.scm (r-topicmodels): Update to 0.2-11.
Ricardo Wurmus [Mon, 27 Apr 2020 15:31:17 +0000 (17:31 +0200)]
gnu: r-stopwords: Update to 2.0.
* gnu/packages/cran.scm (r-stopwords): Update to 2.0.
[propagated-inputs]: Add r-desc and r-usethis.
Ricardo Wurmus [Mon, 27 Apr 2020 15:31:09 +0000 (17:31 +0200)]
gnu: r-fda: Update to 5.1.4.
* gnu/packages/cran.scm (r-fda): Update to 5.1.4.
Ricardo Wurmus [Mon, 27 Apr 2020 15:30:46 +0000 (17:30 +0200)]
gnu: r-abtest: Update to 0.2.1.
* gnu/packages/cran.scm (r-abtest): Update to 0.2.1.
[propagated-inputs]: Add r-qgam; remove r-vgam.
Ricardo Wurmus [Mon, 27 Apr 2020 15:30:40 +0000 (17:30 +0200)]
gnu: Add r-qgam.
* gnu/packages/cran.scm (r-qgam): New variable.
Ricardo Wurmus [Mon, 27 Apr 2020 15:30:10 +0000 (17:30 +0200)]
gnu: r-systemfonts: Update to 0.2.0.
* gnu/packages/cran.scm (r-systemfonts): Update to 0.2.0.
[inputs]: Remove freetype.
[native-inputs]: Add r-knitr.
Ricardo Wurmus [Mon, 27 Apr 2020 15:29:48 +0000 (17:29 +0200)]
gnu: r-dalex: Update to 1.2.0.
* gnu/packages/cran.scm (r-dalex): Update to 1.2.0.
[propagated-inputs]: Add r-ibreakdown and r-ingredients.
Ricardo Wurmus [Mon, 27 Apr 2020 15:29:23 +0000 (17:29 +0200)]
gnu: r-rex: Update to 1.2.0.
* gnu/packages/cran.scm (r-rex): Update to 1.2.0.
[propagated-inputs]: Remove r-magrittr.
[native-inputs]: Add r-knitr.
Ricardo Wurmus [Mon, 27 Apr 2020 15:29:09 +0000 (17:29 +0200)]
gnu: r-optparse: Update to 1.6.6.
* gnu/packages/cran.scm (r-optparse): Update to 1.6.6.
[native-inputs]: Add r-knitr.
Ricardo Wurmus [Mon, 27 Apr 2020 15:29:05 +0000 (17:29 +0200)]
gnu: r-sf: Update to 0.9-2.
* gnu/packages/cran.scm (r-sf): Update to 0.9-2.
Ricardo Wurmus [Mon, 27 Apr 2020 15:29:00 +0000 (17:29 +0200)]
gnu: r-future-apply: Update to 1.5.0.
* gnu/packages/cran.scm (r-future-apply): Update to 1.5.0.
Ricardo Wurmus [Mon, 27 Apr 2020 15:28:55 +0000 (17:28 +0200)]
gnu: r-etm: Update to 1.1.
* gnu/packages/cran.scm (r-etm): Update to 1.1.
Ricardo Wurmus [Mon, 27 Apr 2020 15:28:50 +0000 (17:28 +0200)]
gnu: r-future: Update to 1.17.0.
* gnu/packages/cran.scm (r-future): Update to 1.17.0.
Ricardo Wurmus [Mon, 27 Apr 2020 15:28:40 +0000 (17:28 +0200)]
gnu: r-protviz: Update to 0.6.4.
* gnu/packages/cran.scm (r-protviz): Update to 0.6.4.
Ricardo Wurmus [Mon, 27 Apr 2020 15:28:33 +0000 (17:28 +0200)]
gnu: r-rgl: Update to 0.100.54.
* gnu/packages/cran.scm (r-rgl): Update to 0.100.54.
Ricardo Wurmus [Mon, 27 Apr 2020 15:28:26 +0000 (17:28 +0200)]
gnu: r-ggeffects: Update to 0.14.3.
* gnu/packages/cran.scm (r-ggeffects): Update to 0.14.3.
Ricardo Wurmus [Mon, 27 Apr 2020 15:28:18 +0000 (17:28 +0200)]
gnu: r-bayestestr: Update to 0.6.0.
* gnu/packages/cran.scm (r-bayestestr): Update to 0.6.0.
Ricardo Wurmus [Mon, 27 Apr 2020 15:28:03 +0000 (17:28 +0200)]
gnu: r-emmeans: Update to 1.4.6.
* gnu/packages/cran.scm (r-emmeans): Update to 1.4.6.
[native-inputs]: Add r-knitr.
Ricardo Wurmus [Mon, 27 Apr 2020 15:27:54 +0000 (17:27 +0200)]
gnu: r-raster: Update to 3.1-5.
* gnu/packages/cran.scm (r-raster): Update to 3.1-5.
Ricardo Wurmus [Mon, 27 Apr 2020 15:27:50 +0000 (17:27 +0200)]
gnu: r-insight: Update to 0.8.3.
* gnu/packages/cran.scm (r-insight): Update to 0.8.3.
Ricardo Wurmus [Mon, 27 Apr 2020 15:27:42 +0000 (17:27 +0200)]
gnu: r-tinytex: Update to 0.22.
* gnu/packages/cran.scm (r-tinytex): Update to 0.22.
Ricardo Wurmus [Mon, 27 Apr 2020 15:27:31 +0000 (17:27 +0200)]
gnu: r-tsp: Update to 1.1-10.
* gnu/packages/cran.scm (r-tsp): Update to 1.1-10.
Ricardo Wurmus [Mon, 27 Apr 2020 15:27:15 +0000 (17:27 +0200)]
gnu: r-broom: Update to 0.5.6.
* gnu/packages/cran.scm (r-broom): Update to 0.5.6.
[native-inputs]: Add r-knitr.
Ricardo Wurmus [Mon, 27 Apr 2020 15:27:07 +0000 (17:27 +0200)]
gnu: r-distillery: Update to 1.0-7.
* gnu/packages/cran.scm (r-distillery): Update to 1.0-7.
Ricardo Wurmus [Mon, 27 Apr 2020 15:27:01 +0000 (17:27 +0200)]
gnu: r-ff: Update to 2.2-14.2.
* gnu/packages/cran.scm (r-ff): Update to 2.2-14.2.
Ricardo Wurmus [Mon, 27 Apr 2020 15:26:32 +0000 (17:26 +0200)]
gnu: r-powerlaw: Update to 0.70.6.
* gnu/packages/cran.scm (r-powerlaw): Update to 0.70.6.
[propagated-inputs]: Remove r-vgam; add r-pracma.
[native-inputs]: Add r-knitr.
Ricardo Wurmus [Mon, 27 Apr 2020 15:26:21 +0000 (17:26 +0200)]
gnu: r-shinyfiles: Update to 0.8.0.
* gnu/packages/cran.scm (r-shinyfiles): Update to 0.8.0.
Ricardo Wurmus [Mon, 27 Apr 2020 14:22:32 +0000 (16:22 +0200)]
gnu: Add r-ibreakdown.
* gnu/packages/cran.scm (r-ibreakdown): New variable.
Ricardo Wurmus [Mon, 27 Apr 2020 14:22:21 +0000 (16:22 +0200)]
gnu: Add r-ingredients.
* gnu/packages/cran.scm (r-ingredients): New variable.
Ricardo Wurmus [Mon, 27 Apr 2020 12:41:04 +0000 (14:41 +0200)]
gnu: r-purrr: Update to 0.3.4.
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.4.
[native-inputs]: Add r-knitr.
Ricardo Wurmus [Mon, 27 Apr 2020 12:40:58 +0000 (14:40 +0200)]
gnu: r-plotrix: Update to 3.7-8.
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-8.
Ricardo Wurmus [Mon, 27 Apr 2020 12:40:41 +0000 (14:40 +0200)]
gnu: r-withr: Update to 2.2.0.
* gnu/packages/statistics.scm (r-withr): Update to 2.2.0.
[native-inputs]: Add r-knitr.
Ricardo Wurmus [Mon, 27 Apr 2020 12:39:41 +0000 (14:39 +0200)]
gnu: r-xml2: Update to 1.3.2.
* gnu/packages/statistics.scm (r-xml2): Update to 1.3.2.
Ricardo Wurmus [Mon, 27 Apr 2020 12:39:14 +0000 (14:39 +0200)]
gnu: r-dbplyr: Update to 1.4.3.
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.4.3.
[propagated-inputs]: Add r-lifecycle.
[native-inputs]: Add r-knitr.
Ricardo Wurmus [Mon, 27 Apr 2020 12:39:02 +0000 (14:39 +0200)]
gnu: r-tibble: Update to 3.0.1.
* gnu/packages/statistics.scm (r-tibble): Update to 3.0.1.
Ricardo Wurmus [Mon, 27 Apr 2020 12:38:56 +0000 (14:38 +0200)]
gnu: r-foreign: Update to 0.8-78.
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-78.
Ricardo Wurmus [Mon, 27 Apr 2020 12:37:07 +0000 (14:37 +0200)]
gnu: r-with-tests, r-minimal: Update to 4.0.0.
* gnu/packages/statistics.scm (r-with-tests, r-minimal): Update to 4.0.0.
(r-with-tests)[arguments]: Add phase "set-locales".
[native-inputs]: Add texlive-ae, texlive-inconsolata, and
texlive-latex-xkeyval to texlive-union.
[inputs]: Replace pcre with pcre2.
Björn Höfling [Mon, 27 Apr 2020 22:15:34 +0000 (00:15 +0200)]
gnu: stellarium: Update to 0.20.1.
* gnu/packages/astronomy.scm (stellarium): Update to 0.20.1.
operator.name [Wed, 22 Apr 2020 18:57:07 +0000 (19:57 +0100)]
doc: Update url to singularity before link rot occurs.
* doc/guix.texi: Update url to singularity before link rot occurs.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Raghav Gururajan [Thu, 23 Apr 2020 00:55:40 +0000 (20:55 -0400)]
guix: edit: Make nano the default editor.
* guix/scripts/edit.scm: Make nano the default editor.
Nano is sensible default, as it is installed by base system.
For development, user can set custom value for $EDITOR.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Ludovic Courtès [Mon, 27 Apr 2020 20:17:53 +0000 (22:17 +0200)]
import: crate: Gracefully handle non-existent crates.
Fixes <https://bugs.gnu.org/40891>.
Reported by Hartmut Goebel <h.goebel@crazy-compilers.com>.
* guix/import/crate.scm (crate->guix-package): Wrap value of
'version-number' and 'version*' in (and crate ...).
Ludovic Courtès [Mon, 27 Apr 2020 20:12:59 +0000 (22:12 +0200)]
tests: Remove trailing commas in JSON tests.
These commas are rejected by Guile-JSON 3.5.0.
* tests/crate.scm (test-foo-dependencies)
(test-root-dependencies, test-intermediate-1-dependencies)
(test-intermediate-2-dependencies): Remove trailing commas.
* tests/gem.scm (test-bar-json): Likewise.
* tests/pypi.scm (test-json): Likewise.
Roel Janssen [Mon, 27 Apr 2020 19:34:10 +0000 (21:34 +0200)]
gnu: Update minimap2 to 2.17.
* gnu/packages/bioinformatics.scm (minimap2): Update to 2.17.
Oleg Pykhalov [Mon, 27 Apr 2020 19:21:11 +0000 (22:21 +0300)]
gnu: Add sbcl-stumpwm-swm-gaps.
* gnu/packages/wm.scm (sbcl-stumpwm-swm-gaps): New variable.
Vincent Legoll [Sun, 26 Apr 2020 21:10:10 +0000 (23:10 +0200)]
gnu: tarsplitter: Fix typo in description (spilt/split).
* gnu/packages/compression.scm (tarsplitter)[description]: Fix typo.
HCoop / jackhill / guix / guix.git / log