jackhill/guix/guix.git
8 years agobuild: 'make assert-binaries-available' shows the list of systems.
Ludovic Courtès [Wed, 27 Apr 2016 13:00:49 +0000 (15:00 +0200)]
build: 'make assert-binaries-available' shows the list of systems.

* build-aux/check-available-binaries.scm: Display %HYDRA-SUPPORTED-SYSTEMS.

8 years agognu: blender: Build against ffmpeg 2.8.
Ludovic Courtès [Wed, 27 Apr 2016 12:15:46 +0000 (14:15 +0200)]
gnu: blender: Build against ffmpeg 2.8.

Reported by Danny Milosavljevic <dannym@scratchpost.org>.

* gnu/packages/graphics.scm (blender)[inputs]: Use FFMPEG-2.8 instead of
FFMPEG.

8 years agognu: Add missing synopses and descriptions.
Ludovic Courtès [Wed, 27 Apr 2016 08:08:00 +0000 (10:08 +0200)]
gnu: Add missing synopses and descriptions.

* gnu/packages/bootstrap.scm (package-from-tarball)
(%bootstrap-glibc, %bootstrap-gcc): Set 'description' field.
* gnu/packages/make-bootstrap.scm (%bootstrap-tarballs): Set 'synopsis'
and 'description'.

8 years agolint: Report synopses/descriptions that are not strings.
Ludovic Courtès [Wed, 27 Apr 2016 08:05:45 +0000 (10:05 +0200)]
lint: Report synopses/descriptions that are not strings.

Suggested by John Darrington.

* guix/scripts/lint.scm (check-description-style): Emit a warning when
DESCRIPTION is not a string.
(check-synopsis-style): Likewise.
(check-gnu-synopsis+description): Likewise.
* tests/lint.scm ("description: not a string", "synopsis: not a
string"): New tests.

8 years agognu: Add java-xz.
Roel Janssen [Tue, 26 Apr 2016 22:00:44 +0000 (00:00 +0200)]
gnu: Add java-xz.

* gnu/packages/java.scm (java-xz): New variable.

8 years agognu: python-ly: Update to 0.9.4.
Ricardo Wurmus [Wed, 27 Apr 2016 08:38:55 +0000 (10:38 +0200)]
gnu: python-ly: Update to 0.9.4.

* gnu/packages/python.scm (python-ly): Update to 0.9.4.

8 years agognu: ruby-2.2: Update to 2.2.5.
Ben Woodcroft [Wed, 27 Apr 2016 07:39:05 +0000 (17:39 +1000)]
gnu: ruby-2.2: Update to 2.2.5.

* gnu/packages/ruby.scm (ruby-2.2): Update to 2.2.5.
[origin]: Remove snippet.

8 years agognu: icedtea-8: Update to 3.0.1.
Leo Famulari [Wed, 27 Apr 2016 04:26:19 +0000 (00:26 -0400)]
gnu: icedtea-8: Update to 3.0.1.

Fixes CVE-2016-0686, CVE-2016-0687, CVE-2016-0695, CVE-2016-3425,
CVE-2016-3426, CVE-2016-3427.

* gnu/packages/java.scm (icedtea-8): Update to 3.0.1.

8 years agognu: icedtea-7: Update to 2.6.6.
Leo Famulari [Wed, 27 Apr 2016 04:15:33 +0000 (00:15 -0400)]
gnu: icedtea-7: Update to 2.6.6.

Fixes CVE-2016-0686, CVE-2016-0687, CVE-2016-0695, CVE-2016-3425, CVE-2016-3427.

* gnu/packages/java.scm (icedtea-7): Update to 2.6.6.

8 years agognu: Add gimp-fourier.
Ricardo Wurmus [Sat, 2 Apr 2016 06:12:32 +0000 (08:12 +0200)]
gnu: Add gimp-fourier.

* gnu/packages/gimp.scm (gimp-fourier): New variable.

8 years agognu: Add Aria Maestosa.
Ricardo Wurmus [Mon, 28 Mar 2016 14:52:50 +0000 (16:52 +0200)]
gnu: Add Aria Maestosa.

* gnu/packages/music.scm (aria-maestosa): New variable.

8 years agognu: wxwidgets: Enable webview support.
Ricardo Wurmus [Mon, 28 Mar 2016 11:19:18 +0000 (13:19 +0200)]
gnu: wxwidgets: Enable webview support.

* gnu/packages/wxwidgets.scm (wxwidgets)[inputs]: Add webkitgtk-2.4.
[arguments]: Add configure flags to enable webview via the webkitgtk
backend.

8 years agognu: java-swt: Update to 4.5.
Ricardo Wurmus [Tue, 26 Apr 2016 19:20:02 +0000 (21:20 +0200)]
gnu: java-swt: Update to 4.5.

* gnu/packages/java.scm (java-swt): Update to 4.5.

8 years agognu: frescobaldi: Update to 2.19.0.
Ricardo Wurmus [Tue, 26 Apr 2016 19:11:07 +0000 (21:11 +0200)]
gnu: frescobaldi: Update to 2.19.0.

* gnu/packages/music.scm (frescobaldi): Update to 2.19.0.

8 years agognu: r-rcpparmadillo: Update to 0.6.700.3.0.
Ricardo Wurmus [Wed, 20 Apr 2016 12:41:40 +0000 (14:41 +0200)]
gnu: r-rcpparmadillo: Update to 0.6.700.3.0.

* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 6.700.3.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.6.700.3.0.

8 years agognu: r-plotly: Update to 3.4.13.
Ricardo Wurmus [Wed, 20 Apr 2016 12:40:35 +0000 (14:40 +0200)]
gnu: r-plotly: Update to 3.4.13.

* gnu/packages/statistics.scm (r-plotly): Update to 3.4.13.
[propagated-inputs]: Add r-hexbin, r-scales, and r-tidyr.

8 years agognu: r-httr: Update to 1.1.0.
Ricardo Wurmus [Wed, 20 Apr 2016 12:39:55 +0000 (14:39 +0200)]
gnu: r-httr: Update to 1.1.0.

* gnu/packages/statistics.scm (r-httr): Update to 1.1.0.
[propagated-inputs]: Add r-openssl.

8 years agognu: r-r6: Update to 2.1.2.
Ricardo Wurmus [Wed, 20 Apr 2016 12:39:12 +0000 (14:39 +0200)]
gnu: r-r6: Update to 2.1.2.

* gnu/packages/statistics.scm (r-r6): Update to 2.1.2.
[propagated-inputs]: Remove.

8 years agognu: r-testthat: Update to 1.0.0.
Ricardo Wurmus [Wed, 20 Apr 2016 12:38:13 +0000 (14:38 +0200)]
gnu: r-testthat: Update to 1.0.0.

* gnu/packages/statistics.scm (r-testthat): Update to 1.0.0.
[propagated-inputs]: Add r-magrittr, r-praise, and r-r6.

8 years agognu: r-viridis: Update to 0.3.4.
Ricardo Wurmus [Wed, 20 Apr 2016 12:37:38 +0000 (14:37 +0200)]
gnu: r-viridis: Update to 0.3.4.

* gnu/packages/statistics.scm (r-viridis): Update to 0.3.4.

8 years agognu: r-matrixstats: Update to 0.50.1.
Ricardo Wurmus [Wed, 20 Apr 2016 12:37:01 +0000 (14:37 +0200)]
gnu: r-matrixstats: Update to 0.50.1.

* gnu/packages/statistics.scm (r-matrixstats): Update to 0.50.1.

8 years agognu: r-r-rsp: Update to 0.21.0.
Ricardo Wurmus [Wed, 20 Apr 2016 12:36:35 +0000 (14:36 +0200)]
gnu: r-r-rsp: Update to 0.21.0.

* gnu/packages/statistics.scm (r-r-rsp): Update to 0.21.0.

8 years agognu: r-r-utils: Update to 2.3.0.
Ricardo Wurmus [Wed, 20 Apr 2016 12:35:55 +0000 (14:35 +0200)]
gnu: r-r-utils: Update to 2.3.0.

* gnu/packages/statistics.scm (r-r-utils): Update to 2.3.0.

8 years agognu: r-r-oo: Update to 1.20.0.
Ricardo Wurmus [Wed, 20 Apr 2016 12:35:29 +0000 (14:35 +0200)]
gnu: r-r-oo: Update to 1.20.0.

* gnu/packages/statistics.scm (r-r-oo): Update to 1.20.0.

8 years agognu: r-r-methodss3: Update to 1.7.1.
Ricardo Wurmus [Wed, 20 Apr 2016 12:35:00 +0000 (14:35 +0200)]
gnu: r-r-methodss3: Update to 1.7.1.

* gnu/packages/statistics.scm (r-r-methodss3): Update to 1.7.1.

8 years agognu: r-xml: Update to 3.98-1.4.
Ricardo Wurmus [Wed, 20 Apr 2016 12:34:28 +0000 (14:34 +0200)]
gnu: r-xml: Update to 3.98-1.4.

* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.4.

8 years agognu: r-gridextra: Update to 2.2.1.
Ricardo Wurmus [Wed, 20 Apr 2016 12:34:00 +0000 (14:34 +0200)]
gnu: r-gridextra: Update to 2.2.1.

* gnu/packages/statistics.scm (r-gridextra): Update to 2.2.1.

8 years agognu: r-gtable: Update to 0.2.0.
Ricardo Wurmus [Wed, 20 Apr 2016 12:33:33 +0000 (14:33 +0200)]
gnu: r-gtable: Update to 0.2.0.

* gnu/packages/statistics.scm (r-gtable): Update to 0.2.0.

8 years agognu: r-rmarkdown: Update to 0.9.5.
Ricardo Wurmus [Wed, 20 Apr 2016 12:32:57 +0000 (14:32 +0200)]
gnu: r-rmarkdown: Update to 0.9.5.

* gnu/packages/statistics.scm (r-rmarkdown): Update to 0.9.5.

8 years agognu: r-plotrix: Update to 3.6-1.
Ricardo Wurmus [Wed, 20 Apr 2016 12:32:28 +0000 (14:32 +0200)]
gnu: r-plotrix: Update to 3.6-1.

* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-1.

8 years agognu: r-devtools: Update to 1.11.0.
Ricardo Wurmus [Wed, 20 Apr 2016 12:31:58 +0000 (14:31 +0200)]
gnu: r-devtools: Update to 1.11.0.

* gnu/packages/statistics.scm (r-devtools): Update to 1.11.0.

8 years agognu: r-rstudioapi: Update to 0.5.
Ricardo Wurmus [Wed, 20 Apr 2016 12:31:30 +0000 (14:31 +0200)]
gnu: r-rstudioapi: Update to 0.5.

* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.5.

8 years agognu: r-git2r: Update to 0.14.0.
Ricardo Wurmus [Wed, 20 Apr 2016 12:30:56 +0000 (14:30 +0200)]
gnu: r-git2r: Update to 0.14.0.

* gnu/packages/statistics.scm (r-git2r): Update to 0.14.0.

8 years agognu: r-roxygen2: Update to 5.0.1.
Ricardo Wurmus [Wed, 20 Apr 2016 12:30:04 +0000 (14:30 +0200)]
gnu: r-roxygen2: Update to 5.0.1.

* gnu/packages/statistics.scm (r-roxygen2): Update to 5.0.1.

8 years agognu: r-cluster: Update to 2.0.4.
Ricardo Wurmus [Wed, 20 Apr 2016 12:29:35 +0000 (14:29 +0200)]
gnu: r-cluster: Update to 2.0.4.

* gnu/packages/statistics.scm (r-cluster): Update to 2.0.4.

8 years agognu: r-memoise: Update to 1.0.0.
Ricardo Wurmus [Wed, 20 Apr 2016 12:28:59 +0000 (14:28 +0200)]
gnu: r-memoise: Update to 1.0.0.

* gnu/packages/statistics.scm (r-memoise): Update to 1.0.0.

8 years agognu: r-microbenchmark: Update to 1.4-2.1.
Ricardo Wurmus [Wed, 20 Apr 2016 12:28:20 +0000 (14:28 +0200)]
gnu: r-microbenchmark: Update to 1.4-2.1.

* gnu/packages/statistics.scm (r-microbenchmark): Update to 1.4-2.1.

8 years agognu: r-knitr: Update to 1.12.3.
Ricardo Wurmus [Wed, 20 Apr 2016 12:27:52 +0000 (14:27 +0200)]
gnu: r-knitr: Update to 1.12.3.

* gnu/packages/statistics.scm (r-knitr): Update to 1.12.3.

8 years agognu: r-formatr: Update to 1.3.
Ricardo Wurmus [Wed, 20 Apr 2016 12:27:29 +0000 (14:27 +0200)]
gnu: r-formatr: Update to 1.3.

* gnu/packages/statistics.scm (r-formatr): Update to 1.3.

8 years agognu: r-evaluate: Update to 0.8.3.
Ricardo Wurmus [Wed, 20 Apr 2016 12:26:51 +0000 (14:26 +0200)]
gnu: r-evaluate: Update to 0.8.3.

* gnu/packages/statistics.scm (r-evaluate): Update to 0.8.3.

8 years agognu: r-bh: Update to 1.60.0-1.
Ricardo Wurmus [Wed, 20 Apr 2016 12:26:06 +0000 (14:26 +0200)]
gnu: r-bh: Update to 1.60.0-1.

* gnu/packages/statistics.scm (r-bh): Update to 1.60.0-1.

8 years agognu: r-ggplot2: Update to 2.1.0.
Ricardo Wurmus [Wed, 20 Apr 2016 12:25:33 +0000 (14:25 +0200)]
gnu: r-ggplot2: Update to 2.1.0.

* gnu/packages/statistics.scm (r-ggplot2): Update to 2.1.0.

8 years agognu: r-scales: Update to 0.4.0.
Ricardo Wurmus [Wed, 20 Apr 2016 12:25:05 +0000 (14:25 +0200)]
gnu: r-scales: Update to 0.4.0.

* gnu/packages/statistics.scm (r-scales): Update to 0.4.0.

8 years agognu: r-stringi: Update to 1.0-1.
Ricardo Wurmus [Wed, 20 Apr 2016 12:24:32 +0000 (14:24 +0200)]
gnu: r-stringi: Update to 1.0-1.

* gnu/packages/statistics.scm (r-stringi): Update to 1.0-1.

8 years agognu: r-munsell: Update to 0.4.3.
Ricardo Wurmus [Wed, 20 Apr 2016 12:23:48 +0000 (14:23 +0200)]
gnu: r-munsell: Update to 0.4.3.

* gnu/packages/statistics.scm (r-munsell): Update to 0.4.3.

8 years agognu: r-digest: Update to 0.6.9.
Ricardo Wurmus [Wed, 20 Apr 2016 12:22:56 +0000 (14:22 +0200)]
gnu: r-digest: Update to 0.6.9.

* gnu/packages/statistics.scm (r-digest): Update to 0.6.9.
[arguments]: Disable tests and vignettes.

8 years agognu: Add r-hexbin.
Ricardo Wurmus [Wed, 20 Apr 2016 12:14:41 +0000 (14:14 +0200)]
gnu: Add r-hexbin.

* gnu/packages/statistics.scm (r-hexbin): New variable.

8 years agognu: Add r-tidyr.
Ricardo Wurmus [Wed, 20 Apr 2016 12:14:17 +0000 (14:14 +0200)]
gnu: Add r-tidyr.

* gnu/packages/statistics.scm (r-tidyr): New variable.

8 years agognu: Add r-openssl.
Ricardo Wurmus [Wed, 20 Apr 2016 12:13:06 +0000 (14:13 +0200)]
gnu: Add r-openssl.

* gnu/packages/statistics.scm (r-openssl): New variable.

8 years agognu: Add r-praise.
Ricardo Wurmus [Wed, 20 Apr 2016 12:12:40 +0000 (14:12 +0200)]
gnu: Add r-praise.

* gnu/packages/statistics.scm (r-praise): New variable.

8 years agognu: r-acsnminer: Update to 0.16.01.29.
Ricardo Wurmus [Tue, 19 Apr 2016 15:46:27 +0000 (17:46 +0200)]
gnu: r-acsnminer: Update to 0.16.01.29.

* gnu/packages/bioinformatics.scm (r-acsnminer): Update to 0.16.01.29.

8 years agognu: r-qtl: Update to 1.39-5.
Ricardo Wurmus [Tue, 19 Apr 2016 15:45:55 +0000 (17:45 +0200)]
gnu: r-qtl: Update to 1.39-5.

* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.39-5.

8 years agognu: r-curl: Update to 0.9.7.
Ricardo Wurmus [Tue, 19 Apr 2016 15:45:12 +0000 (17:45 +0200)]
gnu: r-curl: Update to 0.9.7.

* gnu/packages/web.scm (r-curl): Update to 0.9.7.

8 years agognu: r-htmlwidgets: Update to 0.6.
Ricardo Wurmus [Tue, 19 Apr 2016 15:44:35 +0000 (17:44 +0200)]
gnu: r-htmlwidgets: Update to 0.6.

* gnu/packages/web.scm (r-htmlwidgets): Update to 0.6.

8 years agognu: r-servr: Update to 0.4.
Ricardo Wurmus [Tue, 19 Apr 2016 15:44:04 +0000 (17:44 +0200)]
gnu: r-servr: Update to 0.4.

* gnu/packages/web.scm (r-servr): Update to 0.4.

8 years agognu: r-jsonlite: Update to 0.9.19.
Ricardo Wurmus [Tue, 19 Apr 2016 15:43:38 +0000 (17:43 +0200)]
gnu: r-jsonlite: Update to 0.9.19.

* gnu/packages/web.scm (r-jsonlite): Update to 0.9.19.

8 years agognu: r-rcpp: Update to 0.12.4.
Ricardo Wurmus [Tue, 19 Apr 2016 15:43:02 +0000 (17:43 +0200)]
gnu: r-rcpp: Update to 0.12.4.

* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.4.

8 years agognu: Add filevercmp.
Roel Janssen [Mon, 25 Apr 2016 09:17:21 +0000 (11:17 +0200)]
gnu: Add filevercmp.

* gnu/packages/bioinformatics.scm (filevercmp): New variable.

8 years agognu: pinentry: Update to 0.9.7.
Efraim Flashner [Tue, 26 Apr 2016 12:28:54 +0000 (15:28 +0300)]
gnu: pinentry: Update to 0.9.7.

* gnu/packages/gnupg.scm (pinentry): Update to 0.9.7.

8 years agognu: manaplus: Update to 1.6.4.23.
Alex Kost [Mon, 25 Apr 2016 17:38:24 +0000 (20:38 +0300)]
gnu: manaplus: Update to 1.6.4.23.

* gnu/packages/games.scm (manaplus): Update to 1.6.4.23.

8 years agognu: git-modes: Update to 1.2.2.
Alex Kost [Mon, 25 Apr 2016 16:16:52 +0000 (19:16 +0300)]
gnu: git-modes: Update to 1.2.2.

* gnu/packages/emacs.scm (git-modes): Update to 1.2.2.

8 years agognu: emacs-with-editor: Update to 2.5.1.
Alex Kost [Mon, 25 Apr 2016 16:16:01 +0000 (19:16 +0300)]
gnu: emacs-with-editor: Update to 2.5.1.

* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.5.1.

8 years agognu: magit: Update to 2.6.1.
Alex Kost [Tue, 19 Apr 2016 10:52:05 +0000 (13:52 +0300)]
gnu: magit: Update to 2.6.1.

* gnu/packages/emacs.scm (magit): Update to 2.6.1.

8 years agoemacs: Add "edit" command to a list of licenses.
Alex Kost [Sat, 9 Apr 2016 10:26:33 +0000 (13:26 +0300)]
emacs: Add "edit" command to a list of licenses.

* emacs/guix-ui-license.el (guix-license-list-edit): New command.
(guix-license-list-mode-map): Bind it to "e" key.

8 years agoemacs: Add license definition button to License Info buffer.
Alex Kost [Fri, 8 Apr 2016 08:51:54 +0000 (11:51 +0300)]
emacs: Add license definition button to License Info buffer.

* emacs/guix-ui-license.el (guix-license-insert-file): New procedure.
(guix-license-info-format): Use it.

8 years agoemacs: Add 'guix-find-license-definition' command.
Alex Kost [Fri, 8 Apr 2016 08:49:39 +0000 (11:49 +0300)]
emacs: Add 'guix-find-license-definition' command.

* emacs/guix-license.el (guix-license-file): New procedure.
(guix-find-license-definition): New command.
* doc/emacs.texi (Emacs Licenses): Document it.

8 years agognu: Add xfce4-taskmanager.
Kei Yamashita [Mon, 25 Apr 2016 21:33:06 +0000 (17:33 -0400)]
gnu: Add xfce4-taskmanager.

* gnu/packages/xfce.scm (xfce4-taskmanager): Add variable.

8 years agognu: woff2: Fix build parallelism.
Eric Bavier [Mon, 25 Apr 2016 23:38:50 +0000 (18:38 -0500)]
gnu: woff2: Fix build parallelism.

* gnu/packages/patches/woff2-libbrotli.patch: Add dependency of
executables on object files.

8 years agoimport: cpan: check version bounds on core modules.
Eric Bavier [Sat, 16 Apr 2016 04:52:19 +0000 (23:52 -0500)]
import: cpan: check version bounds on core modules.

Modules may be removed from Perl's core, so we must check for a removal
version.

* guix/import/cpan.scm (cpan-module->sexp)[core-module?]: Also check
version upper bound.

8 years agosyscalls: 'terminal-columns' catches EINVAL on the TIOCGWINSZ ioctl.
Ludovic Courtès [Mon, 25 Apr 2016 21:22:45 +0000 (23:22 +0200)]
syscalls: 'terminal-columns' catches EINVAL on the TIOCGWINSZ ioctl.

Reported by Mark H Weaver <mhw@netris.org>.

* guix/build/syscalls.scm (terminal-columns): Tolerate EINVAL.
* tests/syscalls.scm ("terminal-window-size ENOTTY"): Likewise.

8 years agoguix gc: Add '--free-space'.
Ludovic Courtès [Mon, 25 Apr 2016 20:19:33 +0000 (22:19 +0200)]
guix gc: Add '--free-space'.

* guix/scripts/gc.scm (show-help, %options): Add '--free-space'.
(guix-gc)[ensure-free-space]: New procedure.
Handle '--free-space'.

8 years agosyscalls: Add 'statfs'.
Ludovic Courtès [Mon, 25 Apr 2016 15:18:58 +0000 (17:18 +0200)]
syscalls: Add 'statfs'.

* guix/build/syscalls.scm (<file-system>): New record type.
(fsword): New macro.
(%statfs): New C struct.
(statfs): New procedure.

8 years agosyscalls: 'define-c-struct' computes the struct size.
Ludovic Courtès [Mon, 25 Apr 2016 14:47:23 +0000 (16:47 +0200)]
syscalls: 'define-c-struct' computes the struct size.

* guix/build/syscalls.scm (struct-alignment, struct-size): New macros.
(define-c-struct): Add 'size' parameter and honor it.
(sockaddr-in, sockaddr-in6, ifaddrs, winsize): Adjust accordingly.
(%struct-ifaddrs-type, %sizeof-ifaddrs, winsize-struct): Remove.
(terminal-window-size): Use 'make-bytevector' instead of 'make-c-struct'.

8 years agosyscalls: Second argument of packed-struct read is now optional.
Ludovic Courtès [Mon, 25 Apr 2016 13:41:59 +0000 (15:41 +0200)]
syscalls: Second argument of packed-struct read is now optional.

* guix/build/syscalls.scm (define-c-struct)[read]: OFFSET defaults to 0.
(unfold-interface-list): Remove second argument to 'read-ifaddrs'.
(terminal-window-size): Remove second argument to 'read-winsize'.

8 years agosyscalls: Move code around [NFC].
Ludovic Courtès [Mon, 25 Apr 2016 12:57:26 +0000 (14:57 +0200)]
syscalls: Move code around [NFC].

* guix/build/syscalls.scm: Move packed structure handling to the top.

8 years agoAdd "TasksMax=1024" in 'guix-daemon.service'.
Ludovic Courtès [Mon, 25 Apr 2016 12:49:58 +0000 (14:49 +0200)]
Add "TasksMax=1024" in 'guix-daemon.service'.

Suggested by Joram Schrijver <i+guix-devel@joram.io>.

* etc/guix-daemon.service.in (TasksMax): New value.

8 years agognu: python2-pysnptools: Update to 0.3.9.
Efraim Flashner [Mon, 25 Apr 2016 20:33:36 +0000 (23:33 +0300)]
gnu: python2-pysnptools: Update to 0.3.9.

* gnu/packages/python.scm (python2-pysnptools): Update to 0.3.9.
[propagated-inputs]: Add python2-pytz. Move python2-pandas ...
[inputs]: ... to here. Add python2-dateutil-2, python2-six.

8 years agognu: python-terminado: Update to 0.6.
Efraim Flashner [Mon, 25 Apr 2016 14:19:54 +0000 (17:19 +0300)]
gnu: python-terminado: Update to 0.6.

* gnu/packages/python.scm (python-terminado): Update to 0.6.
[inputs]: Remove python-setuptools. Move python-nose ...
[native-inputs]: ... to here.
[properties]: Define python2-variant.
(python2-terminado): Build with 'strip-python2-variant'.
[native-inputs]: Add python2-setuptools.

8 years agognu: python-singledispatch: Rearrange inputs.
Efraim Flashner [Mon, 25 Apr 2016 13:29:17 +0000 (16:29 +0300)]
gnu: python-singledispatch: Rearrange inputs.

* gnu/packages/python.scm (python-singledispatch)[propagated-inputs]:
Move python-six ...
[inputs]: ... to here.

8 years agognu: python-tornado: Rearrange inputs.
Efraim Flashner [Mon, 25 Apr 2016 12:48:12 +0000 (15:48 +0300)]
gnu: python-tornado: Rearrange inputs.

* gnu/packages/python.scm (python-tornado)[properties]: Define
python2-variant.
[inputs]: Remove python-certifi, move python-backports-abc here from
native-inputs.
[native-inputs]: Remove python-setuptools.
(python2-tornado): Build with 'strip-python2-variant'.
[native-inputs]: Add python2-setuptools.

8 years agognu: python-seaborn: Update to 0.7.0.
Efraim Flashner [Mon, 25 Apr 2016 12:17:14 +0000 (15:17 +0300)]
gnu: python-seaborn: Update to 0.7.0.

* gnu/packages/python.scm (python-seaborn): Update to 0.7.0.
[native-inputs]: Remove python-setuptools.
(python2-seaborn): Build with 'strip-python2-variant'.
[propagated-inputs]: Add python2-pytz.
[native-inputs]: Add python2-setuptools.

8 years agognu: python-pandas: Rearrange inputs.
Efraim Flashner [Mon, 25 Apr 2016 02:17:27 +0000 (05:17 +0300)]
gnu: python-pandas: Rearrange inputs.

* gnu/packages/python.scm (python-pandas)[propagated-inputs]: Move
python-pytz, python-dateutil-2 ...
[inputs]: ... to here.

8 years agognu: xfce: Add ristretto.
宋文武 [Mon, 25 Apr 2016 00:30:54 +0000 (08:30 +0800)]
gnu: xfce: Add ristretto.

* gnu/packages/xfce.scm (xfce)[propagated-inputs]: Add ristretto.

8 years agognu: Add ristretto.
Kei Yamashita [Sun, 24 Apr 2016 20:50:36 +0000 (16:50 -0400)]
gnu: Add ristretto.

* gnu/packages/xfce.scm (ristretto): Add variable.

8 years agognu: ncmpcpp: Update to 0.7.4.
Leo Famulari [Sun, 24 Apr 2016 23:04:00 +0000 (19:04 -0400)]
gnu: ncmpcpp: Update to 0.7.4.

* gnu/packages/mpd.scm (ncmpcpp): Update to 0.7.4.

8 years agognu: borg: Update to 1.0.2.
Leo Famulari [Sun, 17 Apr 2016 18:53:18 +0000 (14:53 -0400)]
gnu: borg: Update to 1.0.2.

* gnu/packages/backup.scm (borg): Update to 1.0.2.

8 years agognu: haunt: Update to 0.2.
David Thompson [Sun, 24 Apr 2016 18:01:15 +0000 (14:01 -0400)]
gnu: haunt: Update to 0.2.

* gnu/packages/guile.scm (haunt): Update to 0.2.
[native-inputs]: Add pkg-config and texinfo.
[propagated-inputs]: Add guile-reader.

8 years agognu: guile-minikanren: Remove extra .scm on files.
Erik Edrosa [Wed, 20 Apr 2016 20:22:36 +0000 (16:22 -0400)]
gnu: guile-minikanren: Remove extra .scm on files.

* gnu/packages/guile.scm (guile-minikanren): Remove extra .scm appended
to files.

8 years agognu: guix: Update development snapshot.
Ludovic Courtès [Sun, 24 Apr 2016 21:46:06 +0000 (23:46 +0200)]
gnu: guix: Update development snapshot.

* gnu/packages/package-management.scm (guix-devel): Update to 80627f5.

8 years agognu: openldap: Update to 2.4.44 [fixes CVE-2015-6908].
Leo Famulari [Thu, 21 Apr 2016 16:49:48 +0000 (12:49 -0400)]
gnu: openldap: Update to 2.4.44 [fixes CVE-2015-6908].

* gnu/packages/openldap.scm (openldap)[replacement]: New field.
(openldap-2.4.44): New variable.

8 years agognu: python-feedgenerator: Update to 1.8.
Efraim Flashner [Sun, 24 Apr 2016 18:49:42 +0000 (21:49 +0300)]
gnu: python-feedgenerator: Update to 1.8.

* gnu/packages/python.scm (python-feedgenerator): Update to 1.8.
[arguments]: Remove configure flags.
[inputs]: Move python-setuptools, python-pytz, python-six ...
[native-inputs]: ... to here.
[home-page]: Update project's home-page.

8 years agognu: pelican: Rearrange inputs.
Efraim Flashner [Sun, 24 Apr 2016 18:20:42 +0000 (21:20 +0300)]
gnu: pelican: Rearrange inputs.

* gnu/packages/python.scm (pelican)[native-inputs]: Remove
python-setuptools.
[propagated-inputs]: Move python-feedgenerator, python-jinja2,
python-pygments, python-docutils, python-pytz, python-blinker,
python-unidecode, python-six, python-dateutil-2 ...
[inputs]: ... to here.

8 years agognu: python2-itsdangerous: Use 'strip-python2-variant'.
Efraim Flashner [Sun, 24 Apr 2016 17:41:15 +0000 (20:41 +0300)]
gnu: python2-itsdangerous: Use 'strip-python2-variant'.

* gnu/packages/python.scm (python2-itsdangerous): Use
'strip-python2-variant'.
[native-inputs]: Add python2-setuptools.
(python-itsdangerous)[inputs]: Remove python-setuptools.
[properties]: Define python2-variant.

8 years agognu: python2-oauthlib: Use python2-variant.
Efraim Flashner [Sun, 24 Apr 2016 17:31:23 +0000 (20:31 +0300)]
gnu: python2-oauthlib: Use python2-variant.

* gnu/packages/python.scm (python2-oauthlib): Use 'strip-python2-variant'.
[native-inputs]: Add python2-setuptools.
(python-oauthlib)[inputs]: Remove python-setuptools.
[properties]: Define python2-variant for python2-oauthlib.

8 years agognu: samtools: Update to 1.3.1.
Ben Woodcroft [Sat, 23 Apr 2016 23:45:07 +0000 (09:45 +1000)]
gnu: samtools: Update to 1.3.1.

* gnu/packages/bioinformatics.scm (samtools): Update to 1.3.1.

8 years agoRevert "Merge branch 'gnome-updates'"
Mark H Weaver [Sat, 23 Apr 2016 17:13:53 +0000 (13:13 -0400)]
Revert "Merge branch 'gnome-updates'"

This reverts commit 63655d459e28b09cd8d58743dae14b3460f6c9da, reversing
changes made to 80627f51f0238b9450745f4e642172d059ca5bb5.

8 years agoRevert "gnu: inkscape: Fix build with glibmm-2.48."
Mark H Weaver [Sat, 23 Apr 2016 17:12:53 +0000 (13:12 -0400)]
Revert "gnu: inkscape: Fix build with glibmm-2.48."

This reverts commit 0118c6ab62ac90136fe877ded67869c104440ffd.

8 years agoRevert "gnu: geoclue: Update to 2.4.3."
Mark H Weaver [Sat, 23 Apr 2016 17:12:51 +0000 (13:12 -0400)]
Revert "gnu: geoclue: Update to 2.4.3."

This reverts commit 71a8d3b67c1e85372f0c329b64dbebf12e2b4612.

8 years agoRevert "gnu: gjs: Skip test_utf8_inout test."
Mark H Weaver [Sat, 23 Apr 2016 17:12:49 +0000 (13:12 -0400)]
Revert "gnu: gjs: Skip test_utf8_inout test."

This reverts commit 63e7796f626ee40b8259ce56b93f5596e8a1f8c5.

8 years agognu: gjs: Skip test_utf8_inout test.
宋文武 [Sat, 23 Apr 2016 12:10:01 +0000 (20:10 +0800)]
gnu: gjs: Skip test_utf8_inout test.

* gnu/packages/gnome.scm (gjs)[arguments]: Skip test_utf8_inout test.