jackhill/guix/guix.git
3 years agognu: rust-wayland-egl-0.28: Adapt for new build system.
Efraim Flashner [Mon, 15 Mar 2021 12:36:55 +0000 (14:36 +0200)]
gnu: rust-wayland-egl-0.28: Adapt for new build system.

* gnu/packages/crates-graphics.scm (rust-wayland-egl-0.28)
[arguments]: Don't skip build. Remove cargo-inputs.
[inputs]: Add rust-wayland-client-0.28, rust-wayland-sys-0.28.
[native-inputs]: Add pkg-config.

3 years agognu: rust-wayland-cursor-0.28: Adapt for new build system.
Efraim Flashner [Mon, 15 Mar 2021 12:35:39 +0000 (14:35 +0200)]
gnu: rust-wayland-cursor-0.28: Adapt for new build system.

* gnu/packages/crates-graphics.scm (rust-wayland-cursor-0.28)
[arguments]: Don't skip build. Remove rust-wayland-client-0.28 from
cargo-inputs.
[inputs]: Add rust-nix-0.18, rust-wayland-client-0.28, rust-xcursor-0.3.

3 years agognu: rust-wayland-client-0.28: Adapt for new build system.
Efraim Flashner [Mon, 15 Mar 2021 12:34:08 +0000 (14:34 +0200)]
gnu: rust-wayland-client-0.28: Adapt for new build system.

* gnu/packages/crates-graphics.scm (rust-wayland-client-0.28)
[arguments]: Don't skip build. Remove rust-wayland-commons-0.28,
rust-wayland-scanner-0.28, rust-wayland-sys-0.28 from cargo-inputs.
[inputs]: Add rust-bitflags-1, rust-downcast-rs-1, rust-libc-0.2,
rust-nix-0.18, rust-scoped-tls-1, rust-wayland-commons-0.28,
rust-wayland-scanner-0.28, rust-wayland-sys-0.28.
(rust-wayland-client-0.23): Adjust accordingly.

3 years agognu: rust-wayland-commons-0.28: Adapt for new build system.
Efraim Flashner [Mon, 15 Mar 2021 12:31:12 +0000 (14:31 +0200)]
gnu: rust-wayland-commons-0.28: Adapt for new build system.

* gnu/packages/crates-graphics.scm (rust-wayland-commons-0.28)
[arguments]: Don't skip build. Remove rust-wayland-sys-0.28 from
cargo-inputs.
[inputs]: Add rust-nix-0.18, rust-once-cell-1, rust-smallvec-1,
rust-wayland-sys-0.28.
(rust-wayland-commons-0.23): Adjust accordingly.

3 years agognu: rust-libloading-0.6: Update to 0.6.7.
Efraim Flashner [Mon, 15 Mar 2021 12:28:27 +0000 (14:28 +0200)]
gnu: rust-libloading-0.6: Update to 0.6.7.

* gnu/packages/crates-io.scm (rust-libloading-0.6): Update to 0.6.
[arguments]: Replace rust-cfg-if-0.1 with 1.
[inputs]: Add rust-cfg-if-1, rust-winapi-0.3.

3 years agognu: dlib-0.4: Update to 0.4.2.
Efraim Flashner [Mon, 15 Mar 2021 12:27:08 +0000 (14:27 +0200)]
gnu: dlib-0.4: Update to 0.4.2.

* gnu/packages/crates-io.scm (rust-dlib-0.4): Update to 0.4.2.
[arguments]: Replace rust-libloading-0.5 with 0.6.
[inputs]: Add rust-libloading-0.6.

3 years agognu: rust-proc-macro2-1: Adapt for new build system.
Efraim Flashner [Mon, 15 Mar 2021 12:25:03 +0000 (14:25 +0200)]
gnu: rust-proc-macro2-1: Adapt for new build system.

* gnu/packages/crates-io.scm (rust-proc-macro2-1)[inputs]: Add
rust-unicode-xid-0.2.

3 years agognu: rust-winapi-0.3: Adjust for new build system.
Efraim Flashner [Mon, 15 Mar 2021 12:24:08 +0000 (14:24 +0200)]
gnu: rust-winapi-0.3: Adjust for new build system.

* gnu/packages/crates-io.scm (rust-winapi-0.3)[inputs]: Add
rust-winapi-i686-pc-windows-gnu, rust-winapi-x86-64-pc-windows-gnu.

3 years agognu: rust-pkg-config-0.3: Hardcode location of pkg-config.
Efraim Flashner [Mon, 15 Mar 2021 12:22:52 +0000 (14:22 +0200)]
gnu: rust-pkg-config-0.3: Hardcode location of pkg-config.

* gnu/packages/crates-io.scm (rust-pkg-config-0.3)[arguments]: Add phase
to hardcode location of pkg-config binary.

3 years agognu: rust-pkg-config-0.3: Update to 0.3.19.
Efraim Flashner [Mon, 15 Mar 2021 12:21:49 +0000 (14:21 +0200)]
gnu: rust-pkg-config-0.3: Update to 0.3.19.

* gnu/packages/crates-io.scm (rust-pkg-config-0.3): Update to 0.3.19.

3 years agognu: rust-wayland-sys-0.28: Adapt for new build system.
Efraim Flashner [Mon, 15 Mar 2021 11:09:12 +0000 (13:09 +0200)]
gnu: rust-wayland-sys-0.28: Adapt for new build system.

* gnu/packages/crates-graphics.scm (rust-wayland-sys-0.28)[arguments]:
Don't skip build. Add phase to refer explicitly to wayland libraries.
[inputs]: Add rust-dlib-0.4, rust-lazy-static-1, rust-libc-0.2,
rust-pkg-config-0.3.
[propagated-inputs]: Add wayland.
(rust-wayland-sys-0.23): Adjust accordingly.

3 years agognu: rust-quote-1: Update to 1.0.9.
Efraim Flashner [Mon, 15 Mar 2021 11:05:17 +0000 (13:05 +0200)]
gnu: rust-quote-1: Update to 1.0.9.

* gnu/packages/crates-io.scm (rust-quote-1): Update to 1.0.9.

3 years agobuild-system/cargo: Don't clobber packaged crates while building.
Efraim Flashner [Mon, 15 Mar 2021 11:04:46 +0000 (13:04 +0200)]
build-system/cargo: Don't clobber packaged crates while building.

This fixes an issue where two packages share a common dependent.

* guix/build/cargo-build-system.scm (unpack-rust-crates): Only copy rust
crates into the target directory if there isn't one already there with
the same name.

3 years agognu: r-variantannotation: Move to (gnu packages bioconductor).
zimoun [Mon, 15 Mar 2021 13:01:58 +0000 (14:01 +0100)]
gnu: r-variantannotation: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-variantannotation): Move from here...
* gnu/packages/bioconductor.scm (r-variantannotation): ...to here.

3 years agognu: r-edger: Move to (gnu packages bioconductor).
zimoun [Mon, 15 Mar 2021 13:01:34 +0000 (14:01 +0100)]
gnu: r-edger: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-edger): Move from here...
* gnu/packages/bioconductor.scm (r-edger): ...to here.

3 years agognu: r-genomeinfodb: Move to (gnu packages bioconductor).
zimoun [Mon, 15 Mar 2021 13:01:33 +0000 (14:01 +0100)]
gnu: r-genomeinfodb: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-genomeinfodb): Move from here...
* gnu/packages/bioconductor.scm (r-genomeinfodb): ...to here.

3 years agognu: r-genomeinfodbdata: Move to (gnu packages bioconductor).
zimoun [Mon, 15 Mar 2021 13:01:32 +0000 (14:01 +0100)]
gnu: r-genomeinfodbdata: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-genomeinfodbdata): Move from here...
* gnu/packages/bioconductor.scm (r-genomeinfodbdata): ...to here.
[source]: Use 'bioconductor-uri'.

3 years agognu: r-iranges: Move to (gnu packages bioconductor).
zimoun [Mon, 15 Mar 2021 13:01:31 +0000 (14:01 +0100)]
gnu: r-iranges: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-iranges): Move from here...
* gnu/packages/bioconductor.scm (r-iranges): ...to here.

3 years agognu: r-s4vectors: Move to (gnu packages bioconductor).
zimoun [Mon, 15 Mar 2021 13:01:30 +0000 (14:01 +0100)]
gnu: r-s4vectors: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-s4vectors): Move from here...
* gnu/packages/bioconductor.scm (r-s4vectors): ...to here.

3 years agognu: r-bioccheck: Move to (gnu packages bioconductor).
zimoun [Mon, 15 Mar 2021 13:01:29 +0000 (14:01 +0100)]
gnu: r-bioccheck: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-bioccheck): Move from here...
* gnu/packages/bioconductor.scm (r-bioccheck): ...to here.

3 years agognu: r-grohmm: Move to (gnu packages bioconductor).
zimoun [Mon, 15 Mar 2021 13:01:26 +0000 (14:01 +0100)]
gnu: r-grohmm: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-grohmm): Move from here...
* gnu/packages/bioconductor.scm (r-grohmm): ...to here.

3 years agognu: r-biocstyle: Move to (gnu packages bioconductor).
zimoun [Mon, 15 Mar 2021 13:01:28 +0000 (14:01 +0100)]
gnu: r-biocstyle: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-biocstyle): Move from here...
* gnu/packages/bioconductor.scm (r-biocstyle): ...to here.

3 years agognu: r-biocviews: Move to (gnu packages bioconductor).
zimoun [Mon, 15 Mar 2021 13:01:27 +0000 (14:01 +0100)]
gnu: r-biocviews: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-biocviews): Move from here...
* gnu/packages/bioconductor.scm (r-biocviews): ...to here.

3 years agognu: r-rsqlite: Update to 2.2.4.
Ricardo Wurmus [Mon, 15 Mar 2021 12:42:24 +0000 (13:42 +0100)]
gnu: r-rsqlite: Update to 2.2.4.

* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.4.

3 years agognu: r-rcpparmadillo: Update to 0.10.2.2.0.
Ricardo Wurmus [Mon, 15 Mar 2021 12:42:20 +0000 (13:42 +0100)]
gnu: r-rcpparmadillo: Update to 0.10.2.2.0.

* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.10.2.2.0.

3 years agognu: r-formatr: Update to 1.8.
Ricardo Wurmus [Mon, 15 Mar 2021 12:42:17 +0000 (13:42 +0100)]
gnu: r-formatr: Update to 1.8.

* gnu/packages/statistics.scm (r-formatr): Update to 1.8.
[native-inputs]: Add r-knitr.

3 years agognu: r-survival: Update to 3.2-9.
Ricardo Wurmus [Mon, 15 Mar 2021 12:42:13 +0000 (13:42 +0100)]
gnu: r-survival: Update to 3.2-9.

* gnu/packages/statistics.scm (r-survival): Update to 3.2-9.

3 years agognu: r-textshaping: Update to 0.3.2.
Ricardo Wurmus [Mon, 15 Mar 2021 12:42:10 +0000 (13:42 +0100)]
gnu: r-textshaping: Update to 0.3.2.

* gnu/packages/cran.scm (r-textshaping): Update to 0.3.2.

3 years agognu: r-mlr3tuning: Update to 0.8.0.
Ricardo Wurmus [Mon, 15 Mar 2021 12:42:07 +0000 (13:42 +0100)]
gnu: r-mlr3tuning: Update to 0.8.0.

* gnu/packages/cran.scm (r-mlr3tuning): Update to 0.8.0.

3 years agognu: r-bbotk: Update to 0.3.1.
Ricardo Wurmus [Mon, 15 Mar 2021 12:42:04 +0000 (13:42 +0100)]
gnu: r-bbotk: Update to 0.3.1.

* gnu/packages/cran.scm (r-bbotk): Update to 0.3.1.

3 years agognu: r-workflows: Update to 0.2.2.
Ricardo Wurmus [Mon, 15 Mar 2021 12:42:00 +0000 (13:42 +0100)]
gnu: r-workflows: Update to 0.2.2.

* gnu/packages/cran.scm (r-workflows): Update to 0.2.2.
[propagated-inputs]: Add r-vctrs.

3 years agognu: r-spatstat: Update to 2.0-1.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:56 +0000 (13:41 +0100)]
gnu: r-spatstat: Update to 2.0-1.

* gnu/packages/cran.scm (r-spatstat): Update to 2.0-1.
[propagated-inputs]: Remove r-abind, r-deldir, r-goftest, r-matrix, r-mgcv,
r-nlme, r-polyclip, r-rpart, and r-tensor; add r-spatstat-core,
r-spatstat-geom, and r-spatstat-linnet.

3 years agognu: r-brms: Update to 2.15.0.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:51 +0000 (13:41 +0100)]
gnu: r-brms: Update to 2.15.0.

* gnu/packages/cran.scm (r-brms): Update to 2.15.0.

3 years agognu: r-forecast: Update to 8.14.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:48 +0000 (13:41 +0100)]
gnu: r-forecast: Update to 8.14.

* gnu/packages/cran.scm (r-forecast): Update to 8.14.

3 years agognu: r-lavaan: Update to 0.6-8.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:45 +0000 (13:41 +0100)]
gnu: r-lavaan: Update to 0.6-8.

* gnu/packages/cran.scm (r-lavaan): Update to 0.6-8.

3 years agognu: r-parallelly: Update to 1.24.0.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:41 +0000 (13:41 +0100)]
gnu: r-parallelly: Update to 1.24.0.

* gnu/packages/cran.scm (r-parallelly): Update to 1.24.0.

3 years agognu: r-effectsize: Update to 0.4.4.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:38 +0000 (13:41 +0100)]
gnu: r-effectsize: Update to 0.4.4.

* gnu/packages/cran.scm (r-effectsize): Update to 0.4.4.

3 years agognu: r-magick: Update to 2.7.0.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:35 +0000 (13:41 +0100)]
gnu: r-magick: Update to 2.7.0.

* gnu/packages/cran.scm (r-magick): Update to 2.7.0.

3 years agognu: r-blockfest: Update to 2.0.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:32 +0000 (13:41 +0100)]
gnu: r-blockfest: Update to 2.0.

* gnu/packages/cran.scm (r-blockfest): Update to 2.0.

3 years agognu: r-flextable: Update to 0.6.4.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:29 +0000 (13:41 +0100)]
gnu: r-flextable: Update to 0.6.4.

* gnu/packages/cran.scm (r-flextable): Update to 0.6.4.

3 years agognu: r-maptools: Update to 1.1-1.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:25 +0000 (13:41 +0100)]
gnu: r-maptools: Update to 1.1-1.

* gnu/packages/cran.scm (r-maptools): Update to 1.1-1.

3 years agognu: r-utf8: Update to 1.2.1.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:22 +0000 (13:41 +0100)]
gnu: r-utf8: Update to 1.2.1.

* gnu/packages/cran.scm (r-utf8): Update to 1.2.1.
[native-inputs]: Add r-knitr.

3 years agognu: r-xfun: Update to 0.22.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:18 +0000 (13:41 +0100)]
gnu: r-xfun: Update to 0.22.

* gnu/packages/cran.scm (r-xfun): Update to 0.22.

3 years agognu: r-ipred: Update to 0.9-11.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:15 +0000 (13:41 +0100)]
gnu: r-ipred: Update to 0.9-11.

* gnu/packages/cran.scm (r-ipred): Update to 0.9-11.

3 years agognu: r-lava: Update to 1.6.9.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:12 +0000 (13:41 +0100)]
gnu: r-lava: Update to 1.6.9.

* gnu/packages/cran.scm (r-lava): Update to 1.6.9.

3 years agognu: r-rvest: Update to 1.0.0.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:08 +0000 (13:41 +0100)]
gnu: r-rvest: Update to 1.0.0.

* gnu/packages/cran.scm (r-rvest): Update to 1.0.0.
[propagated-inputs]: Add r-lifecycle, r-rlang, and r-tibble.

3 years agognu: r-zoo: Update to 1.8-9.
Ricardo Wurmus [Mon, 15 Mar 2021 12:41:02 +0000 (13:41 +0100)]
gnu: r-zoo: Update to 1.8-9.

* gnu/packages/cran.scm (r-zoo): Update to 1.8-9.

3 years agognu: Add r-spatstat-linnet.
Ricardo Wurmus [Mon, 15 Mar 2021 12:39:48 +0000 (13:39 +0100)]
gnu: Add r-spatstat-linnet.

* gnu/packages/cran.scm (r-spatstat-linnet): New variable.

3 years agognu: Add r-spatstat-core.
Ricardo Wurmus [Mon, 15 Mar 2021 12:39:25 +0000 (13:39 +0100)]
gnu: Add r-spatstat-core.

* gnu/packages/cran.scm (r-spatstat-core): New variable.

3 years agognu: Add r-spatstat-geom.
Ricardo Wurmus [Mon, 15 Mar 2021 12:39:00 +0000 (13:39 +0100)]
gnu: Add r-spatstat-geom.

* gnu/packages/cran.scm (r-spatstat-geom): New variable.

3 years agognu: Add r-spatstat-sparse.
Ricardo Wurmus [Mon, 15 Mar 2021 12:36:57 +0000 (13:36 +0100)]
gnu: Add r-spatstat-sparse.

* gnu/packages/cran.scm (r-spatstat-sparse): New variable.

3 years agognu: python-sphobjinv: Fix build.
Léo Le Bouter [Mon, 15 Mar 2021 11:51:54 +0000 (12:51 +0100)]
gnu: python-sphobjinv: Fix build.

* gnu/packages/sphinx.scm (python-sphobjinv):
[patches]: Remove.
[propagated-inputs]: Add (uncomment) python-certifi.

3 years agognu: libcroco/fixed: Make private.
Léo Le Bouter [Mon, 15 Mar 2021 11:21:41 +0000 (12:21 +0100)]
gnu: libcroco/fixed: Make private.

* gnu/packages/gnome.scm (libcroco/fixed): Use define instead of
define-public.

3 years agognu: cyrus-sasl/fixed: Make private.
Léo Le Bouter [Mon, 15 Mar 2021 11:21:02 +0000 (12:21 +0100)]
gnu: cyrus-sasl/fixed: Make private.

* gnu/packages/cyrus-sasl.scm (cyrus-sasl/fixed): Use define instead of
define-public.

3 years agognu: unzip/fixed: Make private.
Léo Le Bouter [Mon, 15 Mar 2021 11:19:40 +0000 (12:19 +0100)]
gnu: unzip/fixed: Make private.

* gnu/packages/compression.scm (unzip/fixed): Use define instead of
define-public.

3 years agognu: poetry: Update to 1.1.5.
Tanguy Le Carrour [Fri, 12 Mar 2021 07:50:20 +0000 (08:50 +0100)]
gnu: poetry: Update to 1.1.5.

* gnu/packages/python-xyz.scm (poetry): Update to 1.1.5.

Signed-off-by: Christopher Baines <mail@cbaines.net>
3 years agognu: python-poetry-core: Update to 1.0.2.
Tanguy Le Carrour [Fri, 12 Mar 2021 07:50:19 +0000 (08:50 +0100)]
gnu: python-poetry-core: Update to 1.0.2.

* gnu/packages/python-build.scm (python-poetry-core): Update to 1.0.2.

Signed-off-by: Christopher Baines <mail@cbaines.net>
3 years agognu: r-gkmsvm: Move back to (gnu packages cran).
Ricardo Wurmus [Mon, 15 Mar 2021 11:15:18 +0000 (12:15 +0100)]
gnu: r-gkmsvm: Move back to (gnu packages cran).

* gnu/packages/bioconductor.scm (r-gkmsvm): Move this variable from here...
* gnu/packages/cran.scm (r-gkmsvm): ...to here.

3 years agognu: libusb-for-axoloti: Revert to 1.0.23.
Ricardo Wurmus [Mon, 15 Mar 2021 11:05:50 +0000 (12:05 +0100)]
gnu: libusb-for-axoloti: Revert to 1.0.23.

* gnu/packages/axoloti.scm (libusb-for-axoloti): Revert to 1.0.23, because the
patch does not apply to the latest version.

3 years agognu: guile-opengl: Fix linking with libGL.so.
Ricardo Wurmus [Mon, 15 Mar 2021 10:57:56 +0000 (11:57 +0100)]
gnu: guile-opengl: Fix linking with libGL.so.

* gnu/packages/gl.scm (guile-opengl)[arguments]: Fix reference to libGL.so.

3 years agognu: Add instrain.
Ricardo Wurmus [Mon, 15 Mar 2021 10:38:40 +0000 (11:38 +0100)]
gnu: Add instrain.

* gnu/packages/bioinformatics.scm (instrain): New variable.

3 years agognu: Add python-drep.
Ricardo Wurmus [Mon, 15 Mar 2021 10:38:29 +0000 (11:38 +0100)]
gnu: Add python-drep.

* gnu/packages/bioinformatics.scm (python-drep): New variable.

3 years agognu: Add python-lmfit.
Ricardo Wurmus [Mon, 15 Mar 2021 10:38:15 +0000 (11:38 +0100)]
gnu: Add python-lmfit.

* gnu/packages/python-xyz.scm (python-lmfit): New variable.

3 years agognu: Add python-asteval.
Ricardo Wurmus [Mon, 15 Mar 2021 10:38:06 +0000 (11:38 +0100)]
gnu: Add python-asteval.

* gnu/packages/python-xyz.scm (python-asteval): New variable.

3 years agognu: Add python-uncertainties.
Ricardo Wurmus [Mon, 15 Mar 2021 10:37:52 +0000 (11:37 +0100)]
gnu: Add python-uncertainties.

* gnu/packages/python-xyz.scm (python-uncertainties): New variable.

3 years agognu: guile-email-latest: Update to 0.2.2-1.ca0520a.
Ricardo Wurmus [Mon, 15 Mar 2021 09:34:24 +0000 (10:34 +0100)]
gnu: guile-email-latest: Update to 0.2.2-1.ca0520a.

* gnu/packages/guile-xyz.scm (guile-email-latest): Update to 0.2.2-1.ca0520a.

3 years agognu: Add r-textplot.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:51:41 +0000 (10:51 +0100)]
gnu: Add r-textplot.

* gnu/packages/cran.scm (r-textplot): New variable.

3 years agognu: Add r-btm.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:49:50 +0000 (10:49 +0100)]
gnu: Add r-btm.

* gnu/packages/cran.scm (r-btm): New variable.

3 years agognu: Add r-eyelinker.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:47:48 +0000 (10:47 +0100)]
gnu: Add r-eyelinker.

* gnu/packages/cran.scm (r-eyelinker): New variable.

3 years agognu: Add r-intervals.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:46:39 +0000 (10:46 +0100)]
gnu: Add r-intervals.

* gnu/packages/cran.scm (r-intervals): New variable.

3 years agognu: Add r-rtweet.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:42:29 +0000 (10:42 +0100)]
gnu: Add r-rtweet.

* gnu/packages/cran.scm (r-rtweet): New variable.

3 years agognu: Add r-rworldmap.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:40:21 +0000 (10:40 +0100)]
gnu: Add r-rworldmap.

* gnu/packages/cran.scm (r-rworldmap): New variable.

3 years agognu: Add r-tmaptools.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:38:48 +0000 (10:38 +0100)]
gnu: Add r-tmaptools.

* gnu/packages/cran.scm (r-tmaptools): New variable.

3 years agognu: Add r-stars.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:37:18 +0000 (10:37 +0100)]
gnu: Add r-stars.

* gnu/packages/cran.scm (r-stars): New variable.

3 years agognu: Add r-lwgeom.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:35:20 +0000 (10:35 +0100)]
gnu: Add r-lwgeom.

* gnu/packages/cran.scm (r-lwgeom): New variable.

3 years agognu: Add r-packcircles.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:31:20 +0000 (10:31 +0100)]
gnu: Add r-packcircles.

* gnu/packages/cran.scm (r-packcircles): New variable.

3 years agognu: Add r-readtext.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:29:26 +0000 (10:29 +0100)]
gnu: Add r-readtext.

* gnu/packages/cran.scm (r-readtext): New variable.

3 years agognu: Add r-antiword.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:24:07 +0000 (10:24 +0100)]
gnu: Add r-antiword.

* gnu/packages/cran.scm (r-antiword): New variable.

3 years agognu: Add r-pdftools.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:21:23 +0000 (10:21 +0100)]
gnu: Add r-pdftools.

* gnu/packages/cran.scm (r-pdftools): New variable.

3 years agognu: Add r-qpdf.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:19:00 +0000 (10:19 +0100)]
gnu: Add r-qpdf.

Cannot add to (gnu packages pdf) due to circular module dependency.

* gnu/packages/cran.scm (r-qpdf): New variable.

3 years agognu: Add r-readods.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:13:07 +0000 (10:13 +0100)]
gnu: Add r-readods.

* gnu/packages/cran.scm (r-readods): New variable.

3 years agognu: Add r-streamr
Lars-Dominik Braun [Mon, 15 Mar 2021 09:10:46 +0000 (10:10 +0100)]
gnu: Add r-streamr

* gnu/packages/cran.scm (r-streamr): New variable.

3 years agognu: Add r-ndjson.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:06:08 +0000 (10:06 +0100)]
gnu: Add r-ndjson.

* gnu/packages/cran.scm (r-ndjson): New variable.

3 years agognu: gzstream: Add PIC flag.
Lars-Dominik Braun [Mon, 15 Mar 2021 09:05:24 +0000 (10:05 +0100)]
gnu: gzstream: Add PIC flag.

* gnu/packages/compression.scm (gzstream) [arguments]: Add phase 'use-pic.

3 years agognu: Add r-striprtf.
Lars-Dominik Braun [Mon, 15 Mar 2021 08:43:49 +0000 (09:43 +0100)]
gnu: Add r-striprtf.

* gnu/packages/cran.scm (r-striprtf): New variable.

3 years agognu: Add r-textclean.
Lars-Dominik Braun [Mon, 15 Mar 2021 08:40:05 +0000 (09:40 +0100)]
gnu: Add r-textclean.

* gnu/packages/cran.scm (r-textclean): New variable.

3 years agognu: Add r-english.
Lars-Dominik Braun [Mon, 15 Mar 2021 08:38:23 +0000 (09:38 +0100)]
gnu: Add r-english.

* gnu/packages/cran.scm (r-english): New variable.

3 years agognu: Add r-lexicon.
Lars-Dominik Braun [Mon, 15 Mar 2021 08:36:14 +0000 (09:36 +0100)]
gnu: Add r-lexicon.

* gnu/packages/cran.scm (r-lexicon): New variable.

3 years agognu: Add r-syuzhet.
Lars-Dominik Braun [Mon, 15 Mar 2021 08:28:28 +0000 (09:28 +0100)]
gnu: Add r-syuzhet.

* gnu/packages/cran.scm (r-syuzhet): New variable.

3 years agognu: Add r-textshape.
Lars-Dominik Braun [Mon, 15 Mar 2021 08:25:30 +0000 (09:25 +0100)]
gnu: Add r-textshape.

* gnu/packages/cran.scm (r-textshape): New variable.

3 years agognu: Add r-dtt.
Lars-Dominik Braun [Mon, 15 Mar 2021 08:23:42 +0000 (09:23 +0100)]
gnu: Add r-dtt.

* gnu/packages/algebra.scm (r-dtt): New variable.

3 years agognu: Add r-mgsub.
Lars-Dominik Braun [Mon, 15 Mar 2021 08:20:07 +0000 (09:20 +0100)]
gnu: Add r-mgsub.

* gnu/packages/cran.scm (r-mgsub): New variable.

3 years agognu: Add r-qdapregex.
Lars-Dominik Braun [Mon, 15 Mar 2021 08:18:23 +0000 (09:18 +0100)]
gnu: Add r-qdapregex.

* gnu/packages/cran.scm (r-qdapregex): New variable.

3 years agognu: Add r-esc.
Lars-Dominik Braun [Mon, 15 Mar 2021 08:08:30 +0000 (09:08 +0100)]
gnu: Add r-esc.

* gnu/packages/statistics.scm (r-esc): New variable.

3 years agognu: unzip: Remove redundant and unused "unzip-symlink.patch".
Mark H Weaver [Sun, 14 Mar 2021 23:12:53 +0000 (19:12 -0400)]
gnu: unzip: Remove redundant and unused "unzip-symlink.patch".

This is a followup to commit 31d289a4759909d24dd309ac24d42902a8c20da0,
which added, but did not use, "unzip-symlink.patch", which is
redundant with the pre-existing "unzip-initialize-symlink-flag.patch".

* gnu/packages/patches/unzip-symlink.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

3 years agognu: OpenSSL: Refer to the version number in a more robust way.
Leo Famulari [Sun, 14 Mar 2021 20:28:48 +0000 (16:28 -0400)]
gnu: OpenSSL: Refer to the version number in a more robust way.

* gnu/packages/tls.scm (openssl)[arguments]: Replace use of VERSION with
(PACKAGE-VERSION THIS-PACKAGE).
(openssl/fixed): Adjust accordingly.

3 years agognu: ImageMagick: Refer to the version number in a more robust way.
Leo Famulari [Sun, 14 Mar 2021 20:25:08 +0000 (16:25 -0400)]
gnu: ImageMagick: Refer to the version number in a more robust way.

* gnu/packages/imagemagick.scm (imagemagick)[arguments]: Replace use of VERSION
with (PACKAGE-VERSION THIS-PACKAGE).
(imagemagick/fixed): Adjust accordingly.

3 years agognu: libtiff: Refer to the version number in a more robust way.
Leo Famulari [Sat, 13 Mar 2021 20:47:33 +0000 (15:47 -0500)]
gnu: libtiff: Refer to the version number in a more robust way.

* gnu/packages/image.scm (libtiff)[arguments]: Replace use of VERSION
with (PACKAGE-VERSION THIS-PACKAGE).
(libtiff/fixed): Adjust accordingly.

3 years agognu: libhandy: Update to 1.2.0.
Leo Prikler [Sun, 14 Mar 2021 18:40:32 +0000 (19:40 +0100)]
gnu: libhandy: Update to 1.2.0.

* gnu/packages/gnome.scm (libhandy): Update to 1.2.0.

3 years agoci: Support packages with multiple channels.
Mathieu Othacehe [Sun, 14 Mar 2021 18:30:36 +0000 (19:30 +0100)]
ci: Support packages with multiple channels.

This is a follow-up of 61a1165340a8bcc45550259edca25275d899fe09. For packages
provided by external channels, package-channels procedure will return at least
two channels. Take it into account.

* gnu/ci.scm (cuirass-jobs): Fix channels subset argument.