jackhill/guix/guix.git
3 years agognu: knot: Update to 2.9.6.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 10:04:58 +0000 (12:04 +0200)]
gnu: knot: Update to 2.9.6.

* gnu/packages/dns.scm (knot): Update to 2.9.6.

3 years agognu: xtl: Update to 0.6.17.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 09:59:02 +0000 (11:59 +0200)]
gnu: xtl: Update to 0.6.17.

* gnu/packages/cpp.scm (xtl): Update to 0.6.17.

3 years agognu: enlightenment-wayland: Deprecate package.
Efraim Flashner [Tue, 1 Sep 2020 12:46:13 +0000 (15:46 +0300)]
gnu: enlightenment-wayland: Deprecate package.

* gnu/packages/enlightenment.scm (enlightenment-wayland): Deprecate
package in favor of enlightenment.

3 years agognu: enlightenment: Build with wayland support.
Efraim Flashner [Tue, 1 Sep 2020 12:45:37 +0000 (15:45 +0300)]
gnu: enlightenment: Build with wayland support.

* gnu/packages/enlightenment.scm (enlightenment)[arguments]: Add
configure-flag to build with wayland support.
[inputs]: Add wayland-protocols, xorg-server-xwayland.

3 years agognu: python-efl: Use regex to delete cythonized files.
Efraim Flashner [Tue, 1 Sep 2020 12:40:03 +0000 (15:40 +0300)]
gnu: python-efl: Use regex to delete cythonized files.

* gnu/packages/enlightenment.scm (python-efl)[source]: Adjust snippet to
delete cythonized files based on a regex pattern.

3 years agognu: enlightenment: Use system eject.
Efraim Flashner [Tue, 1 Sep 2020 12:35:41 +0000 (15:35 +0300)]
gnu: enlightenment: Use system eject.

* gnu/packages/enlightenment.scm (enlightenment)[arguments]: Adjust
'set-system-actions phase to refer to eject in /run/current-system.
[native-inputs]: Remove util-linux.

3 years agognu: enlightenment.scm: Remove unneeded module import.
Efraim Flashner [Tue, 1 Sep 2020 12:11:02 +0000 (15:11 +0300)]
gnu: enlightenment.scm: Remove unneeded module import.

* gnu/packages/enlightenment.scm: Remove unneeded module import.

3 years agognu: gap: Update to 4.11.0.
Andreas Enge [Mon, 31 Aug 2020 18:52:11 +0000 (20:52 +0200)]
gnu: gap: Update to 4.11.0.

* gnu/packages/algebra.scm (gap)[source]: Update to 4.11.0. Identify kept
packages by name prefix, dropping version number comparisons.
[inputs]: Add readline.
[arguments]: Use make targets instead of file copying where possible.

3 years agoRevert "system: image: Do not offload image files."
Maxim Cournoyer [Thu, 27 Aug 2020 04:40:52 +0000 (00:40 -0400)]
Revert "system: image: Do not offload image files."

This reverts commit 6a9581741e4ee81226aeb2f1c997df76670a6aab, which is
obsoleted by the previous commit.

3 years agogexp: computed-file: Prevent mistakenly overriding default option values.
Maxim Cournoyer [Thu, 27 Aug 2020 04:32:49 +0000 (00:32 -0400)]
gexp: computed-file: Prevent mistakenly overriding default option values.

In order to do so, default to an empty options list, and expose options whose
default values are sensitive directly as keyword arguments.

* guix/gexp.scm (computed-file): Extract the LOCAL-BUILD? parameter from the
OPTIONS parameter to make it a stand-alone keyword argument.  Introduce an
OPTIONS* binding which is obtained by combining the LOCAL-BUILD? keyword and
its value with OPTIONS.
* doc/guix.texi (G-Expressions): Adjust doc.

Suggested-by: Ludovic Courtès <ludo@gnu.org>
3 years agognu: editorconfig-core-c: Delete static library.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 02:43:34 +0000 (04:43 +0200)]
gnu: editorconfig-core-c: Delete static library.

* gnu/packages/text-editors.scm (editorconfig-core-c)[arguments]: Add a
‘delete-static-library’ phase.

3 years agognu: editorconfig-core-c: Update to 0.12.4.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 02:36:20 +0000 (04:36 +0200)]
gnu: editorconfig-core-c: Update to 0.12.4.

* gnu/packages/text-editors.scm (editorconfig-core-c): Update to 0.12.4.

3 years agognu: youtube-viewer: Update to 3.7.8.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 02:31:16 +0000 (04:31 +0200)]
gnu: youtube-viewer: Update to 3.7.8.

* gnu/packages/video.scm (youtube-viewer): Update to 3.7.8.

3 years agognu: libwacom: Update to 1.5.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 02:08:45 +0000 (04:08 +0200)]
gnu: libwacom: Update to 1.5.

* gnu/packages/xdisorg.scm (libwacom): Update to 1.5.

3 years agognu: wgetpaste: Update bpaste URL & regular expressions.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 02:28:05 +0000 (04:28 +0200)]
gnu: wgetpaste: Update bpaste URL & regular expressions.

* gnu/packages/wget.scm (wgetpaste)[source]: Add patch.
* gnu/packages/patches/wgetpaste-update-bpaste.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

3 years agognu: wgetpaste: Update to 2.30.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 01:10:07 +0000 (03:10 +0200)]
gnu: wgetpaste: Update to 2.30.

* gnu/packages/wget.scm (wgetpaste): Update to 2.30.

3 years agognu: wgetpaste: Use HTTPS home page.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 01:09:39 +0000 (03:09 +0200)]
gnu: wgetpaste: Use HTTPS home page.

* gnu/packages/wget.scm (wgetpaste)[source, home-page]: Use HTTPS.

3 years agognu: wgetpaste: Fix historical confusion.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 01:01:33 +0000 (03:01 +0200)]
gnu: wgetpaste: Fix historical confusion.

* gnu/packages/wget.scm (wgetpaste)[arguments]: Fix the reversed
substitution and clarify its purpose.

3 years agognu: uchardet: Update to 0.0.7.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 00:49:02 +0000 (02:49 +0200)]
gnu: uchardet: Update to 0.0.7.

* gnu/packages/freedesktop.scm (uchardet): Update to 0.0.7.

3 years agognu: fetchmail: Update to 6.4.11.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 00:43:50 +0000 (02:43 +0200)]
gnu: fetchmail: Update to 6.4.11.

* gnu/packages/mail.scm (fetchmail): Update to 6.4.11.

3 years agognu: python-jeepney: Update to 0.4.3.
Tobias Geerinckx-Rice [Tue, 1 Sep 2020 00:21:43 +0000 (02:21 +0200)]
gnu: python-jeepney: Update to 0.4.3.

* gnu/packages/python-crypto.scm (python-jeepney): Update to 0.4.3.

3 years agognu: Add emacs-scpaste.
Brett Gilio [Tue, 1 Sep 2020 00:56:25 +0000 (19:56 -0500)]
gnu: Add emacs-scpaste.

* gnu/packages/emacs-xyz.scm (emacs-scpaste): New variable.

3 years agognu: ptpython: Update to 3.0.5.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 23:14:37 +0000 (01:14 +0200)]
gnu: ptpython: Update to 3.0.5.

The previous version had been broken ever since python-prompt-toolkit
was updated to 3.x.

* gnu/packages/python-xyz.scm (ptpython): Update to 3.0.5.
[propagated-inputs]: Add python-appdirs.  Remove python-docopt.

3 years agognu: python-prompt-toolkit: Update to 3.0.7.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 23:14:28 +0000 (01:14 +0200)]
gnu: python-prompt-toolkit: Update to 3.0.7.

* gnu/packages/python-xyz.scm (python-prompt-toolkit): Update to 3.0.7.

3 years agognu: python-prompt-toolkit: Specify the correct Python 2 variant.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 23:30:01 +0000 (01:30 +0200)]
gnu: python-prompt-toolkit: Specify the correct Python 2 variant.

* gnu/packages/python-xyz.scm (python-prompt-toolkit)[properties]:
The Python-2 version of this package is version 2.x of this package.

3 years agognu: python-nbval: Update to 0.9.6.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 18:31:29 +0000 (20:31 +0200)]
gnu: python-nbval: Update to 0.9.6.

* gnu/packages/python-check.scm (python-nbval): Update to 0.9.6.

3 years agognu: perl-archive-extract: Update to 0.86.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 18:31:19 +0000 (20:31 +0200)]
gnu: perl-archive-extract: Update to 0.86.

* gnu/packages/perl-compression.scm (perl-archive-extract): Update to 0.86.

3 years agognu: perl-io-compress: Update to 2.096.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 18:31:11 +0000 (20:31 +0200)]
gnu: perl-io-compress: Update to 2.096.

* gnu/packages/perl-compression.scm (perl-io-compress): Update to 2.096.

3 years agognu: perl-compress-raw-zlib: Update to 2.096.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 18:31:05 +0000 (20:31 +0200)]
gnu: perl-compress-raw-zlib: Update to 2.096.

* gnu/packages/perl-compression.scm (perl-compress-raw-zlib): Update to 2.096.

3 years agognu: perl-compress-raw-bzip2: Update to 2.096.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 18:31:00 +0000 (20:31 +0200)]
gnu: perl-compress-raw-bzip2: Update to 2.096.

* gnu/packages/perl-compression.scm (perl-compress-raw-bzip2): Update to 2.096.

3 years agognu: python-pytools: Update to 2020.4.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 18:30:43 +0000 (20:30 +0200)]
gnu: python-pytools: Update to 2020.4.

* gnu/packages/opencl.scm (python-pytools): Update to 2020.4.

3 years agognu: ocamlify: Update to 0.0.2.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 18:00:19 +0000 (20:00 +0200)]
gnu: ocamlify: Update to 0.0.2.

* gnu/packages/ocaml.scm (ocamlify): Update to 0.0.2.
[arguments]: Add a ‘disable-safe-string’ phase.

3 years agognu: ocamlify: Parametrize source URI.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 17:40:38 +0000 (19:40 +0200)]
gnu: ocamlify: Parametrize source URI.

* gnu/packages/ocaml.scm (ocamlify)[source]: Construct with VERSION.

3 years agognu: rtmpdump: Don't install the static library.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 17:28:33 +0000 (19:28 +0200)]
gnu: rtmpdump: Don't install the static library.

* gnu/packages/networking.scm (rtmpdump)[arguments]: Add
an ‘omit-static-library’ phase.

3 years agognu: rtmpdump: Update to 2.4.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 17:27:42 +0000 (19:27 +0200)]
gnu: rtmpdump: Update to 2.4.

* gnu/packages/networking.scm (rtmpdump): Update to 2.4.
[arguments]: Fix RUNPATH.

3 years agognu: x42-plugins: Update to 20200714.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 16:11:22 +0000 (18:11 +0200)]
gnu: x42-plugins: Update to 20200714.

* gnu/packages/music.scm (x42-plugins): Update to 20200714.
[source]: Download over HTTPS.

3 years agognu: yoshimi: Update to 1.7.2.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 16:02:57 +0000 (18:02 +0200)]
gnu: yoshimi: Update to 1.7.2.

* gnu/packages/music.scm (yoshimi): Update to 1.7.2.
[source]: Use URL-FETCH once more.

3 years agognu: sooperlooper: Update to 1.7.4.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 15:57:51 +0000 (17:57 +0200)]
gnu: sooperlooper: Update to 1.7.4.

* gnu/packages/music.scm (sooperlooper): Update to 1.7.4.
[source]: Remove upstreamed patch.
* gnu/packages/patches/sooperlooper-build-with-wx-30.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

3 years agognu: pd: Update to 0.51-1.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 15:46:50 +0000 (17:46 +0200)]
gnu: pd: Update to 0.51-1.

* gnu/packages/music.scm (pd): Update to 0.51-1.

3 years agognu: zabbix-agentd: Update to 5.0.3.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 15:43:16 +0000 (17:43 +0200)]
gnu: zabbix-agentd: Update to 5.0.3.

* gnu/packages/monitoring.scm (zabbix-agentd): Update to 5.0.3.

3 years agognu: mutt: Update to 1.14.7.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 15:24:19 +0000 (17:24 +0200)]
gnu: mutt: Update to 1.14.7.

* gnu/packages/mail.scm (mutt): Update to 1.14.7.

3 years agognu: vala@0.48: Update to 0.48.9.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 15:18:38 +0000 (17:18 +0200)]
gnu: vala@0.48: Update to 0.48.9.

* gnu/packages/gnome.scm (vala-0.48): Update to 0.48.9.

3 years agoMakefile.am: Set iso label.
Julien Lepiller [Sat, 29 Aug 2020 13:36:40 +0000 (15:36 +0200)]
Makefile.am: Set iso label.

* Makefile.am (release): Add version number in disk image label.

3 years agognu: ci: Set label in iso9660 jobs.
Julien Lepiller [Sun, 30 Aug 2020 18:43:42 +0000 (20:43 +0200)]
gnu: ci: Set label in iso9660 jobs.

* gnu/ci.scm (image-jobs): Set label of generated ISOs.

3 years agoguix: system: Add `--label' option.
Julien Lepiller [Sat, 29 Aug 2020 13:34:56 +0000 (15:34 +0200)]
guix: system: Add `--label' option.

* guix/scripts/system.scm (%options): Add `--label'.
(system-derivation-for-action): Take a #:label key to set volume ID.
(perform-action): Take a #:label key.
(%default-options): Add default label value.
(process-action): Pass label value from command-line to perform-action.
* gnu/system/image.scm (image-with-label): New procedure.

3 years agoguix system: Clarify what happens where service upgrade fails.
Ludovic Courtès [Mon, 31 Aug 2020 13:09:55 +0000 (15:09 +0200)]
guix system: Clarify what happens where service upgrade fails.

* guix/scripts/system.scm (report-shepherd-error): Use 'warning' instead
of 'report-error'.  Add extra 'warning' and 'display-hint' calls.

3 years agoguix system: reconfigure: Tell users about 'herd status'.
Ludovic Courtès [Mon, 31 Aug 2020 12:54:52 +0000 (14:54 +0200)]
guix system: reconfigure: Tell users about 'herd status'.

* guix/scripts/system.scm (perform-action): Mention 'herd status' when
'upgrade-shepherd-services' completes.

3 years agovm: Disable caching for writable file system mappings.
Ludovic Courtès [Mon, 31 Aug 2020 12:19:22 +0000 (14:19 +0200)]
vm: Disable caching for writable file system mappings.

Fixes <https://bugs.gnu.org/43062>.
Reported by elaexuotee@wilsonb.com.

* gnu/system/vm.scm (mapping->file-system)[options]: Disable loose
caching when WRITABLE? is true.

3 years agopackages: <content-hash> printer gracefully handle #f values.
Ludovic Courtès [Mon, 31 Aug 2020 10:24:21 +0000 (12:24 +0200)]
packages: <content-hash> printer gracefully handle #f values.

Suggested by Robin Green <greenrd@greenrd.org>.

* guix/packages.scm (print-content-hash): Gracefully deal with cases
with 'content-hash-value' returns #f, as is the case for 'linux-libre'.

3 years agossh: 'send-files' displays a progress bar.
Ludovic Courtès [Mon, 31 Aug 2020 09:36:26 +0000 (11:36 +0200)]
ssh: 'send-files' displays a progress bar.

* guix/store.scm (export-paths): Add #:start, #:progress, and #:finish
parameters and honor them.
* guix/ssh.scm (prepare-to-send, notify-transfer-progress)
(notify-transfer-completion): New procedures.
(send-files): Pass #:start, #:progress, and #:finish to 'export-paths'.

3 years agognu: Add rust-gfa-0.6.
Efraim Flashner [Mon, 31 Aug 2020 09:05:13 +0000 (12:05 +0300)]
gnu: Add rust-gfa-0.6.

* gnu/packages/crates-io.scm (rust-gfa-0.6): New variable.

3 years agognu: rust-libssh2-sys-0.2: Update to 0.2.19.
Efraim Flashner [Mon, 31 Aug 2020 08:48:52 +0000 (11:48 +0300)]
gnu: rust-libssh2-sys-0.2: Update to 0.2.19.

* gnu/packages/crates-io.scm (rust-libssh2-sys-0.2): Update to 0.2.19.

3 years agognu: rust-libz-sys-1.0: Rename rust-libz-sys-1.
Efraim Flashner [Mon, 31 Aug 2020 08:42:55 +0000 (11:42 +0300)]
gnu: rust-libz-sys-1.0: Rename rust-libz-sys-1.

* gnu/packages/crates-io.scm (rust-libz-sys-1.0): Rename rust-libz-sys-1.
(rust-curl-sys-0.4, rust-flate2-1.0, rust-freetype-sys-0.9,
rust-libgit2-sys-0.10, rust-libgit2-sys-0.7, rust-libssh2-sys-0.2)
[arguments]: Adjust accordingly.
* gnu/packages/syndication.scm (newsboat)[arguments]: Same.

3 years agognu: rust-pcre2-sys-0.2: Update to 0.2.5.
Efraim Flashner [Mon, 31 Aug 2020 08:41:50 +0000 (11:41 +0300)]
gnu: rust-pcre2-sys-0.2: Update to 0.2.5.

* gnu/packages/crates-io.scm (rust-pcre2-sys-0.2): Update to 0.2.5.

3 years agognu: rust-openssl-sys-0.9: Update to 0.9.58.
Efraim Flashner [Mon, 31 Aug 2020 08:41:19 +0000 (11:41 +0300)]
gnu: rust-openssl-sys-0.9: Update to 0.9.58.

* gnu/packages/crates-io.scm (rust-openssl-sys-0.9): Update to 0.9.58.
[arguments]: Replace rust-autocfg-0.1 with 1.0 in cargo-inputs.

3 years agognu: rust-libz-sys-1.0: Update to 1.1.1.
Efraim Flashner [Mon, 31 Aug 2020 08:40:25 +0000 (11:40 +0300)]
gnu: rust-libz-sys-1.0: Update to 1.1.1.

* gnu/packages/crates-io.scm (rust-libz-sys-1.0): Update to 1.1.1.
[source]: Update snippet to remove more bundled code.
[arguments]: Add rust-cmake-0.1 to cargo-inputs.

3 years agognu: rust-libnghttp2-sys-0.1: Update to 0.1.4+1.41.0.
Efraim Flashner [Mon, 31 Aug 2020 08:39:25 +0000 (11:39 +0300)]
gnu: rust-libnghttp2-sys-0.1: Update to 0.1.4+1.41.0.

* gnu/packages/crates-io.scm (rust-libnghttp2-sys-0.1): Update to
0.1.4+1.41.0.
[source]: Add snippet to add dependency on rust-pkg-config.
[arguments]: Don't skip build. Add rust-pkg-config-0.3 to cargo-inputs.
[inputs]: Replace nghttp2 with nghttp2:lib.

3 years agognu: rust-bzip2-sys-0.1: Update to 0.1.9+1.0.8.
Efraim Flashner [Mon, 31 Aug 2020 08:37:28 +0000 (11:37 +0300)]
gnu: rust-bzip2-sys-0.1: Update to 0.1.9+1.0.8.

* gnu/packages/crates-io.scm (rust-bzip2-sys-0.1): Update to 0.1.9+1.0.8.
[source]: Update snippet.
[arguments]: Add rust-pkg-config-0.3 to cargo-inputs.

3 years agognu: rust-backtrace-sys-0.1: Update to 0.1.37.
Efraim Flashner [Mon, 31 Aug 2020 08:36:11 +0000 (11:36 +0300)]
gnu: rust-backtrace-sys-0.1: Update to 0.1.37.

* gnu/packages/crates-io.scm (rust-backtrace-sys-0.1): Update to 0.1.37.

3 years agognu: rust-autocfg-1.0: Update to 1.0.1.
Efraim Flashner [Mon, 31 Aug 2020 08:35:32 +0000 (11:35 +0300)]
gnu: rust-autocfg-1.0: Update to 1.0.1.

* gnu/packages/crates-io.scm (rust-autocfg-1.0): Update to 1.0.1.

3 years agognu: Add guile-srfi-158.
Martin Becze [Sun, 30 Aug 2020 10:44:25 +0000 (05:44 -0500)]
gnu: Add guile-srfi-158.

* gnu/packages/guile-xyz.scm (guile-srfi-158): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
3 years agognu: emacs: Strip double wrap.
Leo Prikler [Fri, 28 Aug 2020 13:34:00 +0000 (15:34 +0200)]
gnu: emacs: Strip double wrap.

* gnu/packages/emacs.scm (emacs)[#:phases]: Add 'strip-double-wrap.
(emacs-minimal emacs-xwidgets emacs-no-x)
(emacs-no-x-toolkit guile-emacs)[#:phases]: Delete 'strip-double-wrap.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
3 years agognu: racket-minimal: Fix hash for version 7.8.
Brendan Tildesley [Mon, 31 Aug 2020 03:02:43 +0000 (13:02 +1000)]
gnu: racket-minimal: Fix hash for version 7.8.

* gnu/packages/scheme.scm (racket-minimal): Fix hash.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
3 years agognu: feh: Enable inotify support.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 02:02:56 +0000 (04:02 +0200)]
gnu: feh: Enable inotify support.

* gnu/packages/image-viewers.scm (feh)[arguments]: Add ‘inotify=1’
to #:make-flags.

3 years agognu: feh: Update to 3.5.
Tobias Geerinckx-Rice [Mon, 31 Aug 2020 01:42:13 +0000 (03:42 +0200)]
gnu: feh: Update to 3.5.

* gnu/packages/image-viewers.scm (feh): Update to 3.5.

3 years agognu: phodav: Update to 2.5.
Tobias Geerinckx-Rice [Sun, 30 Aug 2020 23:59:06 +0000 (01:59 +0200)]
gnu: phodav: Update to 2.5.

* gnu/packages/gnome.scm (phodav): Update to 2.5.
[arguments]: Work around a test failure.
[native-inputs]: Add docbook-xml-4.3.

3 years agognu: facter: Update to 4.0.35.
Tobias Geerinckx-Rice [Sun, 30 Aug 2020 22:27:58 +0000 (00:27 +0200)]
gnu: facter: Update to 4.0.35.

* gnu/packages/admin.scm (facter): Update to 4.0.35.

3 years agoenvironment: Set USER and LOGNAME in container
Lars-Dominik Braun [Tue, 25 Aug 2020 08:52:21 +0000 (10:52 +0200)]
environment: Set USER and LOGNAME in container

* guix/scripts/environment.scm (launch-environment/container): Set
  username environment variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
3 years agognu: r-tidyr: Update to 1.1.2.
Ricardo Wurmus [Sun, 30 Aug 2020 21:29:21 +0000 (23:29 +0200)]
gnu: r-tidyr: Update to 1.1.2.

* gnu/packages/statistics.scm (r-tidyr): Update to 1.1.2.

3 years agognu: r-r-utils: Update to 2.10.1.
Ricardo Wurmus [Sun, 30 Aug 2020 21:29:17 +0000 (23:29 +0200)]
gnu: r-r-utils: Update to 2.10.1.

* gnu/packages/statistics.scm (r-r-utils): Update to 2.10.1.

3 years agognu: r-r-oo: Update to 1.24.0.
Ricardo Wurmus [Sun, 30 Aug 2020 21:29:14 +0000 (23:29 +0200)]
gnu: r-r-oo: Update to 1.24.0.

* gnu/packages/statistics.scm (r-r-oo): Update to 1.24.0.

3 years agognu: r-r-methodss3: Update to 1.8.1.
Ricardo Wurmus [Sun, 30 Aug 2020 21:29:11 +0000 (23:29 +0200)]
gnu: r-r-methodss3: Update to 1.8.1.

* gnu/packages/statistics.scm (r-r-methodss3): Update to 1.8.1.

3 years agognu: r-backports: Update to 1.1.9.
Ricardo Wurmus [Sun, 30 Aug 2020 21:29:08 +0000 (23:29 +0200)]
gnu: r-backports: Update to 1.1.9.

* gnu/packages/statistics.scm (r-backports): Update to 1.1.9.

3 years agognu: r-bit64: Update to 4.0.5.
Ricardo Wurmus [Sun, 30 Aug 2020 21:29:05 +0000 (23:29 +0200)]
gnu: r-bit64: Update to 4.0.5.

* gnu/packages/statistics.scm (r-bit64): Update to 4.0.5.

3 years agognu: r-mgcv: Update to 1.8-33.
Ricardo Wurmus [Sun, 30 Aug 2020 21:29:02 +0000 (23:29 +0200)]
gnu: r-mgcv: Update to 1.8-33.

* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-33.

3 years agognu: r-nlme: Update to 3.1-149.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:59 +0000 (23:28 +0200)]
gnu: r-nlme: Update to 3.1-149.

* gnu/packages/statistics.scm (r-nlme): Update to 3.1-149.

3 years agognu: r-conquer: Update to 1.0.2.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:56 +0000 (23:28 +0200)]
gnu: r-conquer: Update to 1.0.2.

* gnu/packages/cran.scm (r-conquer): Update to 1.0.2.

3 years agognu: r-bdgraph: Update to 2.63.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:52 +0000 (23:28 +0200)]
gnu: r-bdgraph: Update to 2.63.

* gnu/packages/cran.scm (r-bdgraph): Update to 2.63.

3 years agognu: r-openmx: Update to 2.18.1.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:49 +0000 (23:28 +0200)]
gnu: r-openmx: Update to 2.18.1.

* gnu/packages/cran.scm (r-openmx): Update to 2.18.1.
[propagated-inputs]: Add r-lifecycle.

3 years agognu: r-kableextra: Update to 1.2.1.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:45 +0000 (23:28 +0200)]
gnu: r-kableextra: Update to 1.2.1.

* gnu/packages/cran.scm (r-kableextra): Update to 1.2.1.
[propagated-inputs]: Remove r-readr.
[native-inputs]: Add r-knitr.

3 years agognu: r-haplo-stats: Update to 1.8.5.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:40 +0000 (23:28 +0200)]
gnu: r-haplo-stats: Update to 1.8.5.

* gnu/packages/cran.scm (r-haplo-stats): Update to 1.8.5.

3 years agognu: r-rnifti: Update to 1.2.0.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:37 +0000 (23:28 +0200)]
gnu: r-rnifti: Update to 1.2.0.

* gnu/packages/cran.scm (r-rnifti): Update to 1.2.0.

3 years agognu: r-deriv: Update to 4.0.1.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:34 +0000 (23:28 +0200)]
gnu: r-deriv: Update to 4.0.1.

* gnu/packages/cran.scm (r-deriv): Update to 4.0.1.

3 years agognu: r-writexl: Update to 1.3.1.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:30 +0000 (23:28 +0200)]
gnu: r-writexl: Update to 1.3.1.

* gnu/packages/cran.scm (r-writexl): Update to 1.3.1.

3 years agognu: r-insight: Update to 0.9.1.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:27 +0000 (23:28 +0200)]
gnu: r-insight: Update to 0.9.1.

* gnu/packages/cran.scm (r-insight): Update to 0.9.1.

3 years agognu: r-officer: Update to 0.3.13.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:24 +0000 (23:28 +0200)]
gnu: r-officer: Update to 0.3.13.

* gnu/packages/cran.scm (r-officer): Update to 0.3.13.

3 years agognu: r-renv: Update to 0.12.0.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:21 +0000 (23:28 +0200)]
gnu: r-renv: Update to 0.12.0.

* gnu/packages/cran.scm (r-renv): Update to 0.12.0.

3 years agognu: r-maptools: Update to 1.0-2.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:18 +0000 (23:28 +0200)]
gnu: r-maptools: Update to 1.0-2.

* gnu/packages/cran.scm (r-maptools): Update to 1.0-2.

3 years agognu: r-zip: Update to 2.1.1.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:14 +0000 (23:28 +0200)]
gnu: r-zip: Update to 2.1.1.

* gnu/packages/cran.scm (r-zip): Update to 2.1.1.

3 years agognu: r-heatmaply: Update to 1.1.1.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:11 +0000 (23:28 +0200)]
gnu: r-heatmaply: Update to 1.1.1.

* gnu/packages/cran.scm (r-heatmaply): Update to 1.1.1.

3 years agognu: r-ttr: Update to 0.24.1.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:08 +0000 (23:28 +0200)]
gnu: r-ttr: Update to 0.24.1.

* gnu/packages/cran.scm (r-ttr): Update to 0.24.1.

3 years agognu: r-vctrs: Update to 0.3.4.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:05 +0000 (23:28 +0200)]
gnu: r-vctrs: Update to 0.3.4.

* gnu/packages/cran.scm (r-vctrs): Update to 0.3.4.

3 years agognu: r-squarem: Update to 2020.4.
Ricardo Wurmus [Sun, 30 Aug 2020 21:28:02 +0000 (23:28 +0200)]
gnu: r-squarem: Update to 2020.4.

* gnu/packages/cran.scm (r-squarem): Update to 2020.4.

3 years agognu: r-ffbase: Update to 0.13.1.
Ricardo Wurmus [Sun, 30 Aug 2020 21:27:59 +0000 (23:27 +0200)]
gnu: r-ffbase: Update to 0.13.1.

* gnu/packages/cran.scm (r-ffbase): Update to 0.13.1.

3 years agognu: r-dendextend: Update to 1.14.0.
Ricardo Wurmus [Sun, 30 Aug 2020 21:27:55 +0000 (23:27 +0200)]
gnu: r-dendextend: Update to 1.14.0.

* gnu/packages/cran.scm (r-dendextend): Update to 1.14.0.
[native-inputs]: Add r-knitr.

3 years agognu: r-glue: Update to 1.4.2.
Ricardo Wurmus [Sun, 30 Aug 2020 21:27:51 +0000 (23:27 +0200)]
gnu: r-glue: Update to 1.4.2.

* gnu/packages/cran.scm (r-glue): Update to 1.4.2.

3 years agognu: r-gprofiler2: Update to 0.2.0.
Ricardo Wurmus [Sun, 30 Aug 2020 21:27:48 +0000 (23:27 +0200)]
gnu: r-gprofiler2: Update to 0.2.0.

* gnu/packages/cran.scm (r-gprofiler2): Update to 0.2.0.

3 years agognu: r-rticles: Update to 0.15.
Ricardo Wurmus [Sun, 30 Aug 2020 21:27:35 +0000 (23:27 +0200)]
gnu: r-rticles: Update to 0.15.

* gnu/packages/cran.scm (r-rticles): Update to 0.15.

3 years agognu: rust-bytemuck-1: Update to 1.4.0.
Efraim Flashner [Sun, 30 Aug 2020 20:41:13 +0000 (23:41 +0300)]
gnu: rust-bytemuck-1: Update to 1.4.0.

* gnu/packages/crates-io.scm (rust-bytemuck-1): Update to 1.4.0.
[arguments]: Add rust-bytemuck-derive-1 to cargo-inputs.

3 years agognu: Add rust-bytemuck-derive-1.
Efraim Flashner [Sun, 30 Aug 2020 20:40:27 +0000 (23:40 +0300)]
gnu: Add rust-bytemuck-derive-1.

* gnu/packages/crates-io.scm (rust-bytemuck-derive-1): New variable.