jackhill/guix/guix.git
5 years agognu: r-txdb-mmusculus-ucsc-mm10-knowngene: Move to (gnu packages bioconductor).
Ricardo Wurmus [Wed, 6 Mar 2019 20:33:17 +0000 (21:33 +0100)]
gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
Move from here...
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
...to here.

5 years agognu: r-bsgenome-dmelanogaster-ucsc-dm3: Move to (gnu packages bioconductor).
Ricardo Wurmus [Wed, 6 Mar 2019 20:31:41 +0000 (21:31 +0100)]
gnu: r-bsgenome-dmelanogaster-ucsc-dm3: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-bsgenome-dmelanogaster-ucsc-dm3):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3):
...to here.

5 years agognu: r-bsgenome-celegans-ucsc-ce10: Move to (gnu packages bioconductor).
Ricardo Wurmus [Wed, 6 Mar 2019 20:30:30 +0000 (21:30 +0100)]
gnu: r-bsgenome-celegans-ucsc-ce10: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce10):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce10): ...to here.

5 years agognu: r-bsgenome-celegans-ucsc-ce6: Move to (gnu packages bioconductor).
Ricardo Wurmus [Wed, 6 Mar 2019 20:29:20 +0000 (21:29 +0100)]
gnu: r-bsgenome-celegans-ucsc-ce6: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce6):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6): ...to here.

5 years agognu: r-bsgenome-mmusculus-ucsc-mm10: Move to (gnu packages bioconductor).
Ricardo Wurmus [Wed, 6 Mar 2019 20:26:54 +0000 (21:26 +0100)]
gnu: r-bsgenome-mmusculus-ucsc-mm10: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm10):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm10): ...to here.

5 years agognu: r-bsgenome-mmusculus-ucsc-mm9: Move to (gnu packages bioconductor).
Ricardo Wurmus [Wed, 6 Mar 2019 20:25:18 +0000 (21:25 +0100)]
gnu: r-bsgenome-mmusculus-ucsc-mm9: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm9):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9): ...to here.

5 years agognu: r-bsgenome-hsapiens-ucsc-hg19: Move to (gnu packages bioconductor).
Ricardo Wurmus [Wed, 6 Mar 2019 20:23:42 +0000 (21:23 +0100)]
gnu: r-bsgenome-hsapiens-ucsc-hg19: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-ucsc-hg19):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19): ...to here.

5 years agognu: r-bsgenome-hsapiens-1000genomes-hs37d5: Move to (gnu packages bioconductor).
Ricardo Wurmus [Wed, 6 Mar 2019 20:19:21 +0000 (21:19 +0100)]
gnu: r-bsgenome-hsapiens-1000genomes-hs37d5: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-1000genomes-hs37d5):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-1000genomes-hs37d5):
...to here.

5 years agognu: r-txdb-hsapiens-ucsc-hg19-knowngene: Move to (gnu packages bioconductor).
Ricardo Wurmus [Wed, 6 Mar 2019 20:16:33 +0000 (21:16 +0100)]
gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): Move
from here...
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): ...to
here.

5 years agognu: r-geneplotter: Move to (gnu packages bioconductor).
Ricardo Wurmus [Wed, 6 Mar 2019 20:13:38 +0000 (21:13 +0100)]
gnu: r-geneplotter: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-geneplotter): Move from here...
* gnu/packages/bioconductor.scm (r-geneplotter): ...to here.

5 years agognu: Add guile-stis-parser.
Ricardo Wurmus [Wed, 6 Mar 2019 20:07:24 +0000 (21:07 +0100)]
gnu: Add guile-stis-parser.

* gnu/packages/guile-xyz.scm (guile-stis-parser): New variable.

5 years agognu: r-copynumber: Move to (gnu packages bioconductor).
Ricardo Wurmus [Wed, 6 Mar 2019 20:05:43 +0000 (21:05 +0100)]
gnu: r-copynumber: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-copynumber): Move from here...
* gnu/packages/bioconductor.scm (r-copynumber): ...to here.

5 years agognu: Update copyright headers.
Ricardo Wurmus [Wed, 6 Mar 2019 19:59:02 +0000 (20:59 +0100)]
gnu: Update copyright headers.

This is a follow-up to commit 1fe9a36173335b559c695357bc8d884f1d4b144a.

* gnu/packages/bioconductor.scm: Update copyright header to account for moved
package.

5 years agognu: font-gnu-unifont: Update to 12.0.01.
Efraim Flashner [Wed, 6 Mar 2019 18:51:40 +0000 (20:51 +0200)]
gnu: font-gnu-unifont: Update to 12.0.01.

* gnu/packages/fonts.scm (font-gnu-unifont): Update to 12.0.01.

5 years agognu: cabextract: Don't use NAME in source URI.
Tobias Geerinckx-Rice [Wed, 6 Mar 2019 15:47:47 +0000 (16:47 +0100)]
gnu: cabextract: Don't use NAME in source URI.

* gnu/packages/compression.scm (cabextract)[source]: Hard-code NAME.

5 years agognu: cabextract: Update to 1.9.1.
Tobias Geerinckx-Rice [Wed, 6 Mar 2019 15:47:39 +0000 (16:47 +0100)]
gnu: cabextract: Update to 1.9.1.

* gnu/packages/compression.scm (cabextract): Update to 1.9.1.

5 years agognu: lcov: Update to 1.14.
Tobias Geerinckx-Rice [Wed, 6 Mar 2019 15:43:46 +0000 (16:43 +0100)]
gnu: lcov: Update to 1.14.

* gnu/packages/code.scm (lcov): Update to 1.14.

5 years agognu: python-mako: Update home page.
Marius Bakke [Wed, 6 Mar 2019 15:29:55 +0000 (16:29 +0100)]
gnu: python-mako: Update home page.

* gnu/packages/python-xyz.scm (python-mako)[home-page]: Use HTTPS.

5 years agognu: fuseiso: Fix typo.
Marius Bakke [Wed, 6 Mar 2019 15:27:15 +0000 (16:27 +0100)]
gnu: fuseiso: Fix typo.

* gnu/packages/linux.scm (fuseiso)[synopsis]: s/imsages/images.

5 years agognu: valgrind: Add download mirror.
Marius Bakke [Wed, 6 Mar 2019 14:42:50 +0000 (15:42 +0100)]
gnu: valgrind: Add download mirror.

* gnu/packages/valgrind.scm (valgrind)[source](uri): Add mirror.

5 years agognu: bismark: Update to 0.20.1.
Ricardo Wurmus [Wed, 6 Mar 2019 15:24:41 +0000 (16:24 +0100)]
gnu: bismark: Update to 0.20.1.

* gnu/packages/bioinformatics.scm (bismark): Update to 0.20.1.
[source]: Remove obsolete snippet.
[arguments]: Add build phase "replace-plotly.js" and add requried modules;
adjust "install" phase.
[inputs]: Add perl-carp and perl-getopt-long.
[native-inputs]: Add plotly.js and uglify-js.

5 years agognu: Add fuseiso.
Pierre Neidhardt [Wed, 6 Mar 2019 15:23:46 +0000 (16:23 +0100)]
gnu: Add fuseiso.

* gnu/packages/linux.scm (fuseiso): New variable.

5 years agognu: Add r-scde.
Ricardo Wurmus [Wed, 6 Mar 2019 14:55:54 +0000 (15:55 +0100)]
gnu: Add r-scde.

* gnu/packages/bioinformatics.scm (r-scde): New variable.

5 years agognu: Add bowtie1.
Ricardo Wurmus [Wed, 6 Mar 2019 14:25:37 +0000 (15:25 +0100)]
gnu: Add bowtie1.

* gnu/packages/bioinformatics.scm (bowtie1): New variable.

5 years agognu: octave, octave-cli: Update to 5.1.0.
Kei Kebreau [Tue, 5 Mar 2019 15:36:18 +0000 (10:36 -0500)]
gnu: octave, octave-cli: Update to 5.1.0.

* gnu/packages/maths.scm (octave, octave-cli): Update to 5.1.0.

5 years agognu: crawl, crawl-tiles: Update to 0.23.1.
Kei Kebreau [Wed, 27 Feb 2019 06:10:25 +0000 (01:10 -0500)]
gnu: crawl, crawl-tiles: Update to 0.23.1.

* gnu/packages/games.scm (crawl, crawl-tiles): Update to 0.23.1.
[native-inputs]: Add python and python-pyyaml.
[arguments]: Add 'patch-python' phase, modify the 'check' phase and move the
'check' phase back after the 'build' phase.

5 years agognu: perl-czplib: Fix installation directory.
Ricardo Wurmus [Wed, 6 Mar 2019 14:05:38 +0000 (15:05 +0100)]
gnu: perl-czplib: Fix installation directory.

* gnu/packages/perl.scm (perl-czplib)[arguments]: Fix installation directory.

5 years agognu: Add guile-studio.
Ricardo Wurmus [Wed, 6 Mar 2019 13:40:02 +0000 (14:40 +0100)]
gnu: Add guile-studio.

* gnu/packages/guile-xyz.scm (guile-studio): New variable.

5 years agognu: Add genrich.
Ricardo Wurmus [Wed, 6 Mar 2019 12:28:45 +0000 (13:28 +0100)]
gnu: Add genrich.

* gnu/packages/bioinformatics.scm (genrich): New variable.

5 years agognu: r-dnacopy: Remove duplicate definition.
Ricardo Wurmus [Wed, 6 Mar 2019 09:39:28 +0000 (10:39 +0100)]
gnu: r-dnacopy: Remove duplicate definition.

Reported by Christopher Baines <mail@cbaines.net>.

* gnu/packages/bioinformatics.scm (r-dnacopy): Remove variable.

5 years agognu: Add r-org-dr-eg-db.
Ricardo Wurmus [Wed, 6 Mar 2019 09:29:25 +0000 (10:29 +0100)]
gnu: Add r-org-dr-eg-db.

* gnu/packages/bioconductor.scm (r-org-dr-eg-db): New variable.

5 years agognu: java-eclipse-jdt-core: Update to 3.16.0.
Ricardo Wurmus [Tue, 5 Mar 2019 08:37:08 +0000 (09:37 +0100)]
gnu: java-eclipse-jdt-core: Update to 3.16.0.

* gnu/packages/java.scm (java-eclipse-jdt-core): Update to 3.16.0.

5 years agognu: java-eclipse-core-resources: Update to 3.13.200.
Ricardo Wurmus [Tue, 5 Mar 2019 08:36:49 +0000 (09:36 +0100)]
gnu: java-eclipse-core-resources: Update to 3.13.200.

* gnu/packages/java.scm (java-eclipse-core-resources): Update to 3.13.200.

5 years agognu: java-eclipse-core-runtime: Update to 3.15.100.
Ricardo Wurmus [Tue, 5 Mar 2019 08:36:33 +0000 (09:36 +0100)]
gnu: java-eclipse-core-runtime: Update to 3.15.100.

* gnu/packages/java.scm (java-eclipse-core-runtime): Update to 3.15.100.

5 years agognu: java-eclipse-equinox-common: Update to 3.10.200.
Ricardo Wurmus [Tue, 5 Mar 2019 08:35:00 +0000 (09:35 +0100)]
gnu: java-eclipse-equinox-common: Update to 3.10.200.

* gnu/packages/java.scm (java-eclipse-equinox-common): Update to 3.10.200.

5 years agognu: shaderc: Update to 2018.0.
Rutger Helling [Wed, 6 Mar 2019 08:06:24 +0000 (09:06 +0100)]
gnu: shaderc: Update to 2018.0.

* gnu/packages/vulkan.scm (shaderc): Update to 2018.0.

5 years agognu: spirv-tools: Update to 2019.1.
Rutger Helling [Wed, 6 Mar 2019 07:59:00 +0000 (08:59 +0100)]
gnu: spirv-tools: Update to 2019.1.

* gnu/packages/vulkan.scm (spirv-tools): Update to 2019.1.
[arguments]: Add 'fixgcc7 phase.
[native-inputs]: Add gcc-7.

5 years agognu: spirv-headers: Update to commit 8bea0a2.
Rutger Helling [Wed, 6 Mar 2019 07:50:42 +0000 (08:50 +0100)]
gnu: spirv-headers: Update to commit 8bea0a2.

* gnu/packages/vulkan.scm (spirv-headers): Update to commit 8bea0a2.

5 years agognu: glslang: Update to 7.11.3113.
Rutger Helling [Wed, 6 Mar 2019 07:45:27 +0000 (08:45 +0100)]
gnu: glslang: Update to 7.11.3113.

* gnu/packages/vulkan.scm (glslang): Update to 7.11.3113.

5 years agognu: MPD: Update to 0.21.5.
Leo Famulari [Wed, 6 Mar 2019 02:08:23 +0000 (21:08 -0500)]
gnu: MPD: Update to 0.21.5.

* gnu/packages/mpd.scm (mpd): Update to 0.21.5.

5 years agognu: FFmpeg: Build with AV1 support.
Arne Babenhauserheide [Tue, 5 Mar 2019 22:04:00 +0000 (17:04 -0500)]
gnu: FFmpeg: Build with AV1 support.

* gnu/packages/video.scm (ffmpeg)[inputs]: Add libaom.
[arguments]: Pass '--enable-libaom' to #:configure-flags.
(ffmpeg-3.4)[inputs, arguments]: Filter out libaom.

5 years agognu: Add libaom.
Arne Babenhauserheide [Tue, 5 Mar 2019 21:58:32 +0000 (16:58 -0500)]
gnu: Add libaom.

* gnu/packages/video.scm (libaom): New variable.

Co-authored-by: Leo Famulari <leo@famulari.name>
5 years agognu: you-get: Update to 0.4.1256.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 23:13:49 +0000 (00:13 +0100)]
gnu: you-get: Update to 0.4.1256.

* gnu/packages/video.scm (you-get): Update to 0.4.1256.

5 years agognu: youtube-dl: Update to 2019.03.01.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 23:09:53 +0000 (00:09 +0100)]
gnu: youtube-dl: Update to 2019.03.01.

* gnu/packages/video.scm (youtube-dl): Update to 2019.03.01.

5 years agognu: plantuml: Update to 1.2019.2.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 22:57:11 +0000 (23:57 +0100)]
gnu: plantuml: Update to 1.2019.2.

* gnu/packages/uml.scm (plantuml): Update to 1.2019.2.

5 years agognu: xinit: Update to 1.4.1.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 23:14:03 +0000 (00:14 +0100)]
gnu: xinit: Update to 1.4.1.

* gnu/packages/xorg.scm (xinit): Update to 1.4.1.

5 years agognu: lxc: Fix documentation directory.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 23:07:58 +0000 (00:07 +0100)]
gnu: lxc: Fix documentation directory.

* gnu/packages/virtualization.scm (lxc)[arguments]: Set ‘--docdir’ in #:configure-flags.

5 years agognu: lxc: Update to 3.1.0.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 23:06:30 +0000 (00:06 +0100)]
gnu: lxc: Update to 3.1.0.

* gnu/packages/virtualization.scm (lxc): Update to 3.1.0.

5 years agognu: dav1d: Update to 0.2.0.
Leo Famulari [Tue, 5 Mar 2019 22:12:03 +0000 (17:12 -0500)]
gnu: dav1d: Update to 0.2.0.

* gnu/packages/video.scm (dav1d): Update to 0.2.0.
[source]: Add alternate URL.

5 years agoartwork: Update snapshot to b975164.
Ludovic Courtès [Tue, 5 Mar 2019 21:23:25 +0000 (22:23 +0100)]
artwork: Update snapshot to b975164.

* gnu/artwork.scm (%artwork-repository): Update to b975164.

5 years agognu: singularity: Leave PATH unchanged.
Ludovic Courtès [Tue, 5 Mar 2019 17:38:11 +0000 (18:38 +0100)]
gnu: singularity: Leave PATH unchanged.

Previously 'singularity help' & co. would all fail on Guix System
because Coreutils, grep, etc. were not found in $PATH.

* gnu/packages/linux.scm (singularity)[source](snippet): Remove "PATH"
setting from 'bin/singularity.in'.

5 years agognu: singularity: Patch 'Makefile.in' in a snippet.
Ludovic Courtès [Tue, 5 Mar 2019 17:32:30 +0000 (18:32 +0100)]
gnu: singularity: Patch 'Makefile.in' in a snippet.

* gnu/packages/linux.scm (singularity)[source](snippet, modules): New
fields.
[arguments]: Remove 'disable-install-hook' phase.

5 years agognu: wpa-supplicant: Add 'cpe-name' property.
Ludovic Courtès [Mon, 4 Mar 2019 20:43:49 +0000 (21:43 +0100)]
gnu: wpa-supplicant: Add 'cpe-name' property.

* gnu/packages/admin.scm (wpa-supplicant-minimal)[properties]: New
field.

5 years agognu: Syncthing: Update to 1.1.0.
Leo Famulari [Tue, 5 Mar 2019 16:36:20 +0000 (11:36 -0500)]
gnu: Syncthing: Update to 1.1.0.

* gnu/packages/syncthing.scm (syncthing): Update to 1.1.0.

5 years agognu: emacs-no-x-toolkit: Fix configure flags.
Efraim Flashner [Tue, 5 Mar 2019 19:38:32 +0000 (21:38 +0200)]
gnu: emacs-no-x-toolkit: Fix configure flags.

* gnu/packages/emacs.scm (emacs-no-x-toolkit)[arguments]: Don't lose
custom configure flags.

5 years agognu: emacs-disk-usage: Update to 1.3.0.
Pierre Neidhardt [Tue, 5 Mar 2019 19:03:20 +0000 (20:03 +0100)]
gnu: emacs-disk-usage: Update to 1.3.0.

* gnu/packages/emacs-xyz.scm (emacs-disk-usage): Update to 1.3.0.

5 years agognu: thinkfan: Let the build system handle rcscripts/.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 15:56:41 +0000 (16:56 +0100)]
gnu: thinkfan: Let the build system handle rcscripts/.

This moves them from /share/thinkfan to their conventional locations
in /etc and /lib; the former was an arbitrary Guixism anyway.

* gnu/packages/linux.scm (thinkfan)[arguments]:
Re-write 'install-rc-scripts' as 'create-init-scripts' and move it after
the 'unpack' phase.

5 years agognu: thinkfan: Update to 1.0.2.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 15:21:45 +0000 (16:21 +0100)]
gnu: thinkfan: Update to 1.0.2.

* gnu/packages/linux.scm (thinkfan): Update to 1.0.2.
[arguments]: Adjust source directory.

5 years agognu: iucode-tool: Update to 2.3.1.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 12:42:45 +0000 (13:42 +0100)]
gnu: iucode-tool: Update to 2.3.1.

* gnu/packages/linux.scm (iucode-tool): Update to 2.3.1.

5 years agognu: f2fs-tools: Update to 1.12.0.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 12:14:25 +0000 (13:14 +0100)]
gnu: f2fs-tools: Update to 1.12.0.

* gnu/packages/linux.scm (f2fs-tools): Update to 1.12.0.

5 years agognu: f2fs-tools: Don't use NAME in source URI.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 12:13:43 +0000 (13:13 +0100)]
gnu: f2fs-tools: Don't use NAME in source URI.

* gnu/packages/linux.scm (f2fs-tools-1.7, f2fs-tools)[source]:
Hard-code NAME.

5 years agognu: xfsprogs: Update to 4.20.0.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 12:07:29 +0000 (13:07 +0100)]
gnu: xfsprogs: Update to 4.20.0.

* gnu/packages/linux.scm (xfsprogs): Update to 4.20.0.

5 years agognu: libnftnl: Update to 1.1.2.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 12:07:15 +0000 (13:07 +0100)]
gnu: libnftnl: Update to 1.1.2.

* gnu/packages/linux.scm (libnftnl): Update to 1.1.2.

5 years agognu: genext2fs: Update to 1.4.1-4.
Tobias Geerinckx-Rice [Tue, 5 Mar 2019 12:01:32 +0000 (13:01 +0100)]
gnu: genext2fs: Update to 1.4.1-4.

* gnu/packages/linux.scm (genext2fs): Update to 1.4.1-4.
[arguments]: Add 'apply-debian-patches' phase.
[native-inputs]: Add autoconf and automake.

5 years agognu: wget2: Update to 1.99.1.
Efraim Flashner [Tue, 5 Mar 2019 14:17:20 +0000 (16:17 +0200)]
gnu: wget2: Update to 1.99.1.

This fixes https://issues.guix.info/issue/34718.

* gnu/packages/wget.scm (wget2): Update to 1.99.1.
[arguments]: Add phase to skip network tests. Update custom 'bootstrap
phase to not require unnecessary binaries.
[inputs]: Remove doxygen, python. Move autoconf, automake, flex,
gettext-minimal, libtool ...
[native-inputs]: ... to here. Add python-2.

5 years agolinux-modules: module-soft-dependencies: Partition the result and return it as two...
Danny Milosavljevic [Sat, 26 Jan 2019 16:23:13 +0000 (17:23 +0100)]
linux-modules: module-soft-dependencies: Partition the result and return it as two lists.

* gnu/build/linux-modules.scm (module-soft-dependencies): Partition the
result and return it as two lists.

5 years agognu: rust: Update to 1.31.1.
Ivan Petkov [Thu, 28 Feb 2019 03:53:21 +0000 (19:53 -0800)]
gnu: rust: Update to 1.31.1.

* gnu/patches/rust-1.30-gdb-llvm.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (rust): Rename to...
(rust-1.29): ...this.
(rust-1.30): New variable.
(rust): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
5 years agognu: scdoc: Update to 1.9.4.
Rutger Helling [Tue, 5 Mar 2019 10:47:44 +0000 (11:47 +0100)]
gnu: scdoc: Update to 1.9.4.

* gnu/packages/man.scm (scdoc): Update to 1.9.4.

5 years agognu: Add mailcatcher.
Pierre Neidhardt [Thu, 28 Feb 2019 17:41:29 +0000 (18:41 +0100)]
gnu: Add mailcatcher.

* gnu/packages/ruby.scm (mailcatcher): New variable.

5 years agognu: Add ruby-skinny.
Pierre Neidhardt [Thu, 28 Feb 2019 17:41:16 +0000 (18:41 +0100)]
gnu: Add ruby-skinny.

* gnu/packages/ruby.scm (ruby-skinny): New variable.

5 years agognu: Add ruby-thin.
Pierre Neidhardt [Thu, 28 Feb 2019 17:41:04 +0000 (18:41 +0100)]
gnu: Add ruby-thin.

* gnu/packages/ruby.scm (ruby-thin): New variable.

5 years agognu: Add ruby-sinatra.
Pierre Neidhardt [Thu, 28 Feb 2019 17:40:50 +0000 (18:40 +0100)]
gnu: Add ruby-sinatra.

* gnu/packages/ruby.scm (ruby-sinatra): New variable.

5 years agognu: Add ruby-mustermann.
Pierre Neidhardt [Thu, 28 Feb 2019 17:40:13 +0000 (18:40 +0100)]
gnu: Add ruby-mustermann.

* gnu/packages/ruby.scm (ruby-mustermann): New variable.

5 years agognu: ruby-rack-protection: Update to 2.0.5.
Pierre Neidhardt [Mon, 25 Feb 2019 15:10:58 +0000 (16:10 +0100)]
gnu: ruby-rack-protection: Update to 2.0.5.

* gnu/packages/ruby.scm (ruby-rack-protection): Update to 2.0.5.

5 years agognu: python-language-server: Update to 0.24.0.
Brett Gilio [Sat, 2 Mar 2019 22:41:27 +0000 (16:41 -0600)]
gnu: python-language-server: Update to 0.24.0.

* gnu/packages/python-xyz.scm (python-language-server): Update to 0.24.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
5 years agognu: btrfs-progs: Update to 4.20.2.
Tobias Geerinckx-Rice [Mon, 4 Mar 2019 23:01:40 +0000 (00:01 +0100)]
gnu: btrfs-progs: Update to 4.20.2.

* gnu/packages/linux.scm (btrfs-progs): Update to 4.20.2.

5 years agognu: folks: Update to 0.11.4.
Tobias Geerinckx-Rice [Mon, 4 Mar 2019 22:33:00 +0000 (23:33 +0100)]
gnu: folks: Update to 0.11.4.

* gnu/packages/gnome.scm (folks): Update to 0.11.4.

5 years agognu: folks: Don't use NAME in source URI.
Tobias Geerinckx-Rice [Mon, 4 Mar 2019 22:32:47 +0000 (23:32 +0100)]
gnu: folks: Don't use NAME in source URI.

* gnu/packages/gnome.scm (folks)[source]: Hard-code NAME.

5 years agognu: virtualgl: Update to 2.6.1.
Tobias Geerinckx-Rice [Mon, 4 Mar 2019 22:13:58 +0000 (23:13 +0100)]
gnu: virtualgl: Update to 2.6.1.

* gnu/packages/gl.scm (virtualgl): Update to 2.6.1.

5 years agognu: gegl: Update to 0.4.14.
Tobias Geerinckx-Rice [Mon, 4 Mar 2019 21:56:51 +0000 (22:56 +0100)]
gnu: gegl: Update to 0.4.14.

* gnu/packages/gimp.scm (gegl): Update to 0.4.14.

5 years agognu: font-anonymous-pro: Use HTTPS home page.
Tobias Geerinckx-Rice [Mon, 4 Mar 2019 18:51:57 +0000 (19:51 +0100)]
gnu: font-anonymous-pro: Use HTTPS home page.

* gnu/packages/fonts.scm (font-anonymous-pro)[source, home-page]: Use HTTPS.

5 years agognu: font-fira-code: Update to 1.206.
Tobias Geerinckx-Rice [Mon, 4 Mar 2019 18:46:31 +0000 (19:46 +0100)]
gnu: font-fira-code: Update to 1.206.

* gnu/packages/fonts.scm (font-fira-code): Update to 1.206.

5 years agognu: font-terminus: Update to 4.47.
Tobias Geerinckx-Rice [Mon, 4 Mar 2019 18:44:16 +0000 (19:44 +0100)]
gnu: font-terminus: Update to 4.47.

* gnu/packages/fonts.scm (font-terminus): Update to 4.47.  Re-indent.
[native-inputs]: Replace perl with python.  Order alphabetically.
[arguments]: Remove #:configure-flags.

5 years agognu: font-wqy-zenhei: Remove redundant FILE-NAME.
Tobias Geerinckx-Rice [Mon, 4 Mar 2019 18:24:30 +0000 (19:24 +0100)]
gnu: font-wqy-zenhei: Remove redundant FILE-NAME.

* gnu/packages/fonts.scm (font-wqy-zenhei)[source]: Remove FILE-NAME field.

5 years agognu: font-wqy-zenhei: Use HTTPS home page.
Tobias Geerinckx-Rice [Mon, 4 Mar 2019 18:23:01 +0000 (19:23 +0100)]
gnu: font-wqy-zenhei: Use HTTPS home page.

* gnu/packages/fonts.scm (font-wqy-zenhei)[home-page]: Use HTTPS.

5 years agognu: go-github.com-jtolds-gls: Update to 4.20.
Leo Famulari [Mon, 4 Mar 2019 21:58:49 +0000 (16:58 -0500)]
gnu: go-github.com-jtolds-gls: Update to 4.20.

* gnu/packages/golang.scm (go-github.com-jtolds-gls): Update to 4.20.

5 years agognu: Add perl-data-dumper.
Ricardo Wurmus [Mon, 4 Mar 2019 20:58:45 +0000 (21:58 +0100)]
gnu: Add perl-data-dumper.

* gnu/packages/perl.scm (perl-data-dumper): New variable.

5 years agognu: java-eclipse-jdt-core: Include resources.
Ricardo Wurmus [Mon, 4 Mar 2019 20:57:05 +0000 (21:57 +0100)]
gnu: java-eclipse-jdt-core: Include resources.

* gnu/packages/java.scm (java-eclipse-jdt-core)[arguments]: Add build phases
"copy-resources" and "move-sources".

5 years agognu: rocksdb: Update to 5.18.3.
Marius Bakke [Mon, 4 Mar 2019 13:32:19 +0000 (14:32 +0100)]
gnu: rocksdb: Update to 5.18.3.

* gnu/packages/databases.scm (rocksdb): Update to 5.18.3.

5 years agognu: liblo: Update to 0.30.
Marius Bakke [Mon, 4 Mar 2019 12:49:06 +0000 (13:49 +0100)]
gnu: liblo: Update to 0.30.

* gnu/packages/audio.scm (liblo): Update to 0.30.

5 years agognu: xorg-server: Update to 1.20.4.
Marius Bakke [Mon, 4 Mar 2019 12:48:09 +0000 (13:48 +0100)]
gnu: xorg-server: Update to 1.20.4.

* gnu/packages/xorg.scm (xorg-server): Update to 1.20.4.
(xorg-server-for-tests): Stay on version 1.20.3.

5 years agognu: xorg-server: Don't use NAME in source URI.
Marius Bakke [Mon, 4 Mar 2019 12:47:26 +0000 (13:47 +0100)]
gnu: xorg-server: Don't use NAME in source URI.

* gnu/packages/xorg.scm (xorg-server)[source](uri): Hard-code NAME.

5 years agognu: pootle: Update to 2.8.2.
Julien Lepiller [Mon, 4 Mar 2019 20:51:03 +0000 (21:51 +0100)]
gnu: pootle: Update to 2.8.2.

* gnu/packages/django.scm (pootle): Update to 2.8.2.

5 years agognu: python-django-allauth: Update to 0.39.1.
Julien Lepiller [Mon, 4 Mar 2019 20:27:40 +0000 (21:27 +0100)]
gnu: python-django-allauth: Update to 0.39.1.

* gnu/packages/django.scm (python-django-allauth): Update to 0.39.1.

5 years agognu: python2-openid: Fix package.
Julien Lepiller [Mon, 4 Mar 2019 20:21:00 +0000 (21:21 +0100)]
gnu: python2-openid: Fix package.

* gnu/packages/python-web (python2-openid)[arguments]: Disable tests.

5 years agognu: python-django-rq: Update to 1.3.0.
Julien Lepiller [Mon, 4 Mar 2019 20:14:28 +0000 (21:14 +0100)]
gnu: python-django-rq: Update to 1.3.0.

* gnu/packages/django.scm (python-django-rq): Update to 1.3.0.

5 years agognu: python-django-redis: Update to 4.10.0.
Julien Lepiller [Mon, 4 Mar 2019 20:09:12 +0000 (21:09 +0100)]
gnu: python-django-redis: Update to 4.10.0.

* gnu/packages/django.scm (python-django-redis): Update to 4.10.0.

5 years agognu: python-rq: Update to 0.13.0.
Julien Lepiller [Mon, 4 Mar 2019 20:07:03 +0000 (21:07 +0100)]
gnu: python-rq: Update to 0.13.0.

* gnu/packages/databases.scm (python-rq): Update to 0.13.0.

5 years agognu: python-redis: Update to 3.2.0.
Julien Lepiller [Mon, 4 Mar 2019 20:04:16 +0000 (21:04 +0100)]
gnu: python-redis: Update to 3.2.0.

* gnu/packages/databases.scm (python-redis): Update to 3.2.0.

5 years agognu: Add ruby-tilt.
Christopher Baines [Sun, 17 Feb 2019 17:20:45 +0000 (17:20 +0000)]
gnu: Add ruby-tilt.

* gnu/packages/ruby.scm (ruby-tilt): New variable.