jackhill/guix/guix.git
5 years agognu: r-monocle: Update to 2.12.0.
Ricardo Wurmus [Sun, 5 May 2019 21:59:58 +0000 (23:59 +0200)]
gnu: r-monocle: Update to 2.12.0.

* gnu/packages/bioconductor.scm (r-monocle): Update to 2.12.0.

5 years agognu: r-mast: Update to 1.10.0.
Ricardo Wurmus [Sun, 5 May 2019 21:59:42 +0000 (23:59 +0200)]
gnu: r-mast: Update to 1.10.0.

* gnu/packages/bioconductor.scm (r-mast): Update to 1.10.0.
[propagated-inputs]: Add r-blme.

5 years agognu: r-icobra: Update to 1.12.0.
Ricardo Wurmus [Sun, 5 May 2019 21:59:23 +0000 (23:59 +0200)]
gnu: r-icobra: Update to 1.12.0.

* gnu/packages/bioconductor.scm (r-icobra): Update to 1.12.0.

5 years agognu: r-ihw: Update to 1.12.0.
Ricardo Wurmus [Sun, 5 May 2019 21:59:15 +0000 (23:59 +0200)]
gnu: r-ihw: Update to 1.12.0.

* gnu/packages/bioconductor.scm (r-ihw): Update to 1.12.0.

5 years agognu: r-lpsymphony: Update to 1.12.0.
Ricardo Wurmus [Sun, 5 May 2019 21:59:06 +0000 (23:59 +0200)]
gnu: r-lpsymphony: Update to 1.12.0.

* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.12.0.

5 years agognu: r-ebseq: Update to 1.24.0.
Ricardo Wurmus [Sun, 5 May 2019 21:58:55 +0000 (23:58 +0200)]
gnu: r-ebseq: Update to 1.24.0.

* gnu/packages/bioconductor.scm (r-ebseq): Update to 1.24.0.

5 years agognu: r-deds: Update to 1.58.0.
Ricardo Wurmus [Sun, 5 May 2019 21:58:47 +0000 (23:58 +0200)]
gnu: r-deds: Update to 1.58.0.

* gnu/packages/bioconductor.scm (r-deds): Update to 1.58.0.

5 years agognu: r-dnacopy: Update to 1.58.0.
Ricardo Wurmus [Sun, 5 May 2019 21:58:40 +0000 (23:58 +0200)]
gnu: r-dnacopy: Update to 1.58.0.

* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.58.0.

5 years agognu: r-copynumber: Update to 1.24.0.
Ricardo Wurmus [Sun, 5 May 2019 21:58:32 +0000 (23:58 +0200)]
gnu: r-copynumber: Update to 1.24.0.

* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.24.0.

5 years agognu: r-chipexoqual: Update to 1.8.0.
Ricardo Wurmus [Sun, 5 May 2019 21:58:23 +0000 (23:58 +0200)]
gnu: r-chipexoqual: Update to 1.8.0.

* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.8.0.

5 years agognu: r-savr: Update to 1.22.0.
Ricardo Wurmus [Sun, 5 May 2019 21:58:15 +0000 (23:58 +0200)]
gnu: r-savr: Update to 1.22.0.

* gnu/packages/bioconductor.scm (r-savr): Update to 1.22.0.

5 years agognu: r-destiny: Update to 2.14.0.
Ricardo Wurmus [Sun, 5 May 2019 21:57:49 +0000 (23:57 +0200)]
gnu: r-destiny: Update to 2.14.0.

* gnu/packages/bioconductor.scm (r-destiny): Update to 2.14.0.
[propagated-inputs]: Remove r-fnn and r-hmisc; add r-ggplot2.

5 years agognu: r-biocneighbors: Update to 1.2.0.
Ricardo Wurmus [Sun, 5 May 2019 21:57:21 +0000 (23:57 +0200)]
gnu: r-biocneighbors: Update to 1.2.0.

* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.2.0.
[propagated-inputs]: Add r-biocgenerics and r-rcpphnsw.

5 years agognu: r-ruvseq: Update to 1.18.0.
Ricardo Wurmus [Sun, 5 May 2019 21:57:11 +0000 (23:57 +0200)]
gnu: r-ruvseq: Update to 1.18.0.

* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.18.0.

5 years agognu: r-dnabarcodes: Update to 1.14.0.
Ricardo Wurmus [Sun, 5 May 2019 21:57:02 +0000 (23:57 +0200)]
gnu: r-dnabarcodes: Update to 1.14.0.

* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.14.0.

5 years agognu: r-inspect: Update to 1.14.0.
Ricardo Wurmus [Sun, 5 May 2019 21:56:53 +0000 (23:56 +0200)]
gnu: r-inspect: Update to 1.14.0.

* gnu/packages/bioconductor.scm (r-inspect): Update to 1.14.0.

5 years agognu: r-plgem: Update to 1.56.0.
Ricardo Wurmus [Sun, 5 May 2019 21:56:44 +0000 (23:56 +0200)]
gnu: r-plgem: Update to 1.56.0.

* gnu/packages/bioconductor.scm (r-plgem): Update to 1.56.0.

5 years agognu: r-rots: Update to 1.12.0.
Ricardo Wurmus [Sun, 5 May 2019 21:56:36 +0000 (23:56 +0200)]
gnu: r-rots: Update to 1.12.0.

* gnu/packages/bioconductor.scm (r-rots): Update to 1.12.0.

5 years agognu: r-glimma: Update to 1.12.0.
Ricardo Wurmus [Sun, 5 May 2019 21:56:26 +0000 (23:56 +0200)]
gnu: r-glimma: Update to 1.12.0.

* gnu/packages/bioconductor.scm (r-glimma): Update to 1.12.0.

5 years agognu: r-goseq: Update to 1.36.0.
Ricardo Wurmus [Sun, 5 May 2019 21:56:17 +0000 (23:56 +0200)]
gnu: r-goseq: Update to 1.36.0.

* gnu/packages/bioconductor.scm (r-goseq): Update to 1.36.0.

5 years agognu: r-ctc: Update to 1.58.0.
Ricardo Wurmus [Sun, 5 May 2019 21:56:09 +0000 (23:56 +0200)]
gnu: r-ctc: Update to 1.58.0.

* gnu/packages/bioconductor.scm (r-ctc): Update to 1.58.0.

5 years agognu: r-genomicinteractions: Update to 1.18.0.
Ricardo Wurmus [Sun, 5 May 2019 21:56:01 +0000 (23:56 +0200)]
gnu: r-genomicinteractions: Update to 1.18.0.

* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.18.0.

5 years agognu: r-interactionset: Update to 1.12.0.
Ricardo Wurmus [Sun, 5 May 2019 21:55:52 +0000 (23:55 +0200)]
gnu: r-interactionset: Update to 1.12.0.

* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.12.0.

5 years agognu: r-riboseqr: Update to 1.18.0.
Ricardo Wurmus [Sun, 5 May 2019 21:55:45 +0000 (23:55 +0200)]
gnu: r-riboseqr: Update to 1.18.0.

* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.18.0.

5 years agognu: r-riboprofiling: Update to 1.14.0.
Ricardo Wurmus [Sun, 5 May 2019 21:55:37 +0000 (23:55 +0200)]
gnu: r-riboprofiling: Update to 1.14.0.

* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.14.0.

5 years agognu: r-chipcomp: Update to 1.14.0.
Ricardo Wurmus [Sun, 5 May 2019 21:55:28 +0000 (23:55 +0200)]
gnu: r-chipcomp: Update to 1.14.0.

* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.14.0.

5 years agognu: r-bayseq: Update to 2.18.0.
Ricardo Wurmus [Sun, 5 May 2019 21:55:20 +0000 (23:55 +0200)]
gnu: r-bayseq: Update to 2.18.0.

* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.18.0.

5 years agognu: r-qdnaseq: Update to 1.20.0.
Ricardo Wurmus [Sun, 5 May 2019 21:55:11 +0000 (23:55 +0200)]
gnu: r-qdnaseq: Update to 1.20.0.

* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.20.0.

5 years agognu: r-cghcall: Update to 2.46.0.
Ricardo Wurmus [Sun, 5 May 2019 21:55:02 +0000 (23:55 +0200)]
gnu: r-cghcall: Update to 2.46.0.

* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.46.0.

5 years agognu: r-cghbase: Update to 1.44.0.
Ricardo Wurmus [Sun, 5 May 2019 21:54:53 +0000 (23:54 +0200)]
gnu: r-cghbase: Update to 1.44.0.

* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.44.0.

5 years agognu: r-marray: Update to 1.62.0.
Ricardo Wurmus [Sun, 5 May 2019 21:54:41 +0000 (23:54 +0200)]
gnu: r-marray: Update to 1.62.0.

* gnu/packages/bioconductor.scm (r-marray): Update to 1.62.0.

5 years agognu: r-graph: Update to 1.62.0.
Ricardo Wurmus [Sun, 5 May 2019 21:54:25 +0000 (23:54 +0200)]
gnu: r-graph: Update to 1.62.0.

* gnu/packages/bioconductor.scm (r-graph): Update to 1.62.0.

5 years agognu: r-multtest: Update to 2.40.0.
Ricardo Wurmus [Sun, 5 May 2019 21:54:17 +0000 (23:54 +0200)]
gnu: r-multtest: Update to 2.40.0.

* gnu/packages/bioconductor.scm (r-multtest): Update to 2.40.0.

5 years agognu: r-ripseeker: Update to 1.24.0.
Ricardo Wurmus [Sun, 5 May 2019 21:54:07 +0000 (23:54 +0200)]
gnu: r-ripseeker: Update to 1.24.0.

* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.24.0.

5 years agognu: r-diffbind: Update to 2.12.0.
Ricardo Wurmus [Sun, 5 May 2019 21:53:41 +0000 (23:53 +0200)]
gnu: r-diffbind: Update to 2.12.0.

* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.12.0.
[propagated-inputs]: Add r-rhtslib; remove r-zlibbioc.

5 years agognu: r-qvalue: Update to 2.16.0.
Ricardo Wurmus [Sun, 5 May 2019 21:53:22 +0000 (23:53 +0200)]
gnu: r-qvalue: Update to 2.16.0.

* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.16.0.

5 years agognu: r-geneplotter: Update to 1.62.0.
Ricardo Wurmus [Sun, 5 May 2019 21:53:14 +0000 (23:53 +0200)]
gnu: r-geneplotter: Update to 1.62.0.

* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.62.0.

5 years agognu: r-regioner: Update to 1.16.0.
Ricardo Wurmus [Sun, 5 May 2019 21:53:04 +0000 (23:53 +0200)]
gnu: r-regioner: Update to 1.16.0.

* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.0.

5 years agognu: r-hpar: Update to 1.26.0.
Ricardo Wurmus [Sun, 5 May 2019 21:52:55 +0000 (23:52 +0200)]
gnu: r-hpar: Update to 1.26.0.

* gnu/packages/bioconductor.scm (r-hpar): Update to 1.26.0.

5 years agognu: r-annotate: Update to 1.62.0.
Ricardo Wurmus [Sun, 5 May 2019 21:52:45 +0000 (23:52 +0200)]
gnu: r-annotate: Update to 1.62.0.

* gnu/packages/bioconductor.scm (r-annotate): Update to 1.62.0.

5 years agognu: r-biocgenerics: Update to 0.30.0.
Ricardo Wurmus [Sun, 5 May 2019 21:52:35 +0000 (23:52 +0200)]
gnu: r-biocgenerics: Update to 0.30.0.

* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.30.0.

5 years agognu: r-systempiper: Update to 1.18.0.
Ricardo Wurmus [Sun, 5 May 2019 21:51:59 +0000 (23:51 +0200)]
gnu: r-systempiper: Update to 1.18.0.

* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.18.0.
[propagated-inputs]: Replace r-batchjobs with r-batchtools; add r-yaml.

5 years agognu: r-rsamtools: Update to 2.0.0.
Ricardo Wurmus [Sun, 5 May 2019 21:51:32 +0000 (23:51 +0200)]
gnu: r-rsamtools: Update to 2.0.0.

* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.0.0.
[propagated-inputs]: Add r-rhtslib.

5 years agognu: r-impute: Update to 1.58.0.
Ricardo Wurmus [Sun, 5 May 2019 21:51:04 +0000 (23:51 +0200)]
gnu: r-impute: Update to 1.58.0.

* gnu/packages/bioinformatics.scm (r-impute): Update to 1.58.0.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.

5 years agognu: r-rcas: Update to 1.10.0.
Ricardo Wurmus [Sun, 5 May 2019 21:50:46 +0000 (23:50 +0200)]
gnu: r-rcas: Update to 1.10.0.

* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.10.0.
[propagated-inputs]: Add ghc-pandoc.

5 years agognu: r-methylkit: Update to 1.10.0.
Ricardo Wurmus [Sun, 5 May 2019 21:50:24 +0000 (23:50 +0200)]
gnu: r-methylkit: Update to 1.10.0.

* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.10.0.
[propagated-inputs]: Add r-mgcv.

5 years agognu: r-annotationhub: Update to 2.16.0.
Ricardo Wurmus [Sun, 5 May 2019 21:49:56 +0000 (23:49 +0200)]
gnu: r-annotationhub: Update to 2.16.0.

* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.16.0.
[propagated-inputs]: Add r-biocfilecache, r-dplyr, and r-rappdirs.

5 years agognu: r-fastseg: Update to 1.30.0.
Ricardo Wurmus [Sun, 5 May 2019 21:49:48 +0000 (23:49 +0200)]
gnu: r-fastseg: Update to 1.30.0.

* gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.30.0.

5 years agognu: r-keggrest: Update to 1.24.0.
Ricardo Wurmus [Sun, 5 May 2019 21:49:41 +0000 (23:49 +0200)]
gnu: r-keggrest: Update to 1.24.0.

* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.24.0.

5 years agognu: r-gage: Update to 2.34.0.
Ricardo Wurmus [Sun, 5 May 2019 21:49:34 +0000 (23:49 +0200)]
gnu: r-gage: Update to 2.34.0.

* gnu/packages/bioinformatics.scm (r-gage): Update to 2.34.0.

5 years agognu: r-genomicfiles: Update to 1.20.0.
Ricardo Wurmus [Sun, 5 May 2019 21:49:23 +0000 (23:49 +0200)]
gnu: r-genomicfiles: Update to 1.20.0.

* gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.20.0.

5 years agognu: r-complexheatmap: Update to 2.0.0.
Ricardo Wurmus [Sun, 5 May 2019 21:48:56 +0000 (23:48 +0200)]
gnu: r-complexheatmap: Update to 2.0.0.

* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 2.0.0.
[propagated-inputs]: Add r-clue and r-png.

5 years agognu: r-dirichletmultinomial: Update to 1.26.0.
Ricardo Wurmus [Sun, 5 May 2019 21:48:44 +0000 (23:48 +0200)]
gnu: r-dirichletmultinomial: Update to 1.26.0.

* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.26.0.

5 years agognu: r-ensembldb: Update to 2.8.0.
Ricardo Wurmus [Sun, 5 May 2019 21:48:37 +0000 (23:48 +0200)]
gnu: r-ensembldb: Update to 2.8.0.

* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.8.0.

5 years agognu: r-organismdbi: Update to 1.26.0.
Ricardo Wurmus [Sun, 5 May 2019 21:48:29 +0000 (23:48 +0200)]
gnu: r-organismdbi: Update to 1.26.0.

* gnu/packages/bioinformatics.scm (r-organismdbi): Update to 1.26.0.

5 years agognu: r-biovizbase: Update to 1.32.0.
Ricardo Wurmus [Sun, 5 May 2019 21:48:22 +0000 (23:48 +0200)]
gnu: r-biovizbase: Update to 1.32.0.

* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.32.0.

5 years agognu: r-ggbio: Update to 1.32.0.
Ricardo Wurmus [Sun, 5 May 2019 21:48:15 +0000 (23:48 +0200)]
gnu: r-ggbio: Update to 1.32.0.

* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.32.0.

5 years agognu: r-gqtlbase: Update to 1.16.0.
Ricardo Wurmus [Sun, 5 May 2019 21:48:07 +0000 (23:48 +0200)]
gnu: r-gqtlbase: Update to 1.16.0.

* gnu/packages/bioinformatics.scm (r-gqtlbase): Update to 1.16.0.

5 years agognu: r-snpstats: Update to 1.34.0.
Ricardo Wurmus [Sun, 5 May 2019 21:47:56 +0000 (23:47 +0200)]
gnu: r-snpstats: Update to 1.34.0.

* gnu/packages/bioinformatics.scm (r-snpstats): Update to 1.34.0.

5 years agognu: r-erma: Update to 1.0.0.
Ricardo Wurmus [Sun, 5 May 2019 21:47:44 +0000 (23:47 +0200)]
gnu: r-erma: Update to 1.0.0.

* gnu/packages/bioinformatics.scm (r-erma): Update to 1.0.0.

5 years agognu: r-ldblock: Update to 1.14.0.
Ricardo Wurmus [Sun, 5 May 2019 21:47:37 +0000 (23:47 +0200)]
gnu: r-ldblock: Update to 1.14.0.

* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.14.0.

5 years agognu: r-gqtlstats: Update to 1.16.0.
Ricardo Wurmus [Sun, 5 May 2019 21:47:29 +0000 (23:47 +0200)]
gnu: r-gqtlstats: Update to 1.16.0.

* gnu/packages/bioinformatics.scm (r-gqtlstats): Update to 1.16.0.

5 years agognu: r-gviz: Update to 1.28.0.
Ricardo Wurmus [Sun, 5 May 2019 21:47:22 +0000 (23:47 +0200)]
gnu: r-gviz: Update to 1.28.0.

* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.28.0.

5 years agognu: r-gwascat: Update to 2.16.0.
Ricardo Wurmus [Sun, 5 May 2019 21:46:28 +0000 (23:46 +0200)]
gnu: r-gwascat: Update to 2.16.0.

* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.16.0.
[propagated-inputs]: Remove r-annotationhub, r-ggbio, r-ggplot2, r-gqtlstats,
r-graph, r-gviz, r-snpstats, r-summarizedexperiment, and r-variantannotation.

5 years agognu: r-sushi: Update to 1.22.0.
Ricardo Wurmus [Sun, 5 May 2019 21:46:09 +0000 (23:46 +0200)]
gnu: r-sushi: Update to 1.22.0.

* gnu/packages/bioinformatics.scm (r-sushi): Update to 1.22.0.

5 years agognu: r-fithic: Update to 1.10.0.
Ricardo Wurmus [Sun, 5 May 2019 21:46:01 +0000 (23:46 +0200)]
gnu: r-fithic: Update to 1.10.0.

* gnu/packages/bioinformatics.scm (r-fithic): Update to 1.10.0.

5 years agognu: r-hitc: Update to 1.28.0.
Ricardo Wurmus [Sun, 5 May 2019 21:45:53 +0000 (23:45 +0200)]
gnu: r-hitc: Update to 1.28.0.

* gnu/packages/bioinformatics.scm (r-hitc): Update to 1.28.0.

5 years agognu: r-hdf5array: Update to 1.12.0.
Ricardo Wurmus [Sun, 5 May 2019 21:45:29 +0000 (23:45 +0200)]
gnu: r-hdf5array: Update to 1.12.0.

* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.12.0.
[inputs]: Add zlib.
[propagated-inputs]: Add r-rhdf5lib.

5 years agognu: r-rhdf5lib: Update to 1.6.0.
Ricardo Wurmus [Sun, 5 May 2019 21:45:15 +0000 (23:45 +0200)]
gnu: r-rhdf5lib: Update to 1.6.0.

* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.6.0.

5 years agognu: r-beachmat: Update to 2.0.0.
Ricardo Wurmus [Sun, 5 May 2019 21:44:39 +0000 (23:44 +0200)]
gnu: r-beachmat: Update to 2.0.0.

* gnu/packages/bioinformatics.scm (r-beachmat): Update to 2.0.0.
[inputs]: Remove hdf5 and zlib.
[propagated-inputs]: Rmeove r-hdf5array, r-rcpp, r-rhdf5, and r-rhdf5lib.

5 years agognu: r-singlecellexperiment: Update to 1.6.0.
Ricardo Wurmus [Sun, 5 May 2019 21:44:19 +0000 (23:44 +0200)]
gnu: r-singlecellexperiment: Update to 1.6.0.

* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Update to 1.6.0.

5 years agognu: r-scater: Update to 1.12.0.
Ricardo Wurmus [Sun, 5 May 2019 21:43:43 +0000 (23:43 +0200)]
gnu: r-scater: Update to 1.12.0.

* gnu/packages/bioinformatics.scm (r-scater): Update to 1.12.0.
[propagated-inputs]: Add r-biocneighbors and r-biocsingular; remove r-plyr,
r-reshape2, and r-rhdf5lib.

5 years agognu: r-scran: Update to 1.12.0.
Ricardo Wurmus [Sun, 5 May 2019 21:42:47 +0000 (23:42 +0200)]
gnu: r-scran: Update to 1.12.0.

* gnu/packages/bioinformatics.scm (r-scran): Update to 1.12.0.
[propagated-inputs]: Add r-bh, r-biocsingular, and r-dqrng; remove r-rhdf5lib.

5 years agognu: r-delayedmatrixstats: Update to 1.6.0.
Ricardo Wurmus [Sun, 5 May 2019 21:42:34 +0000 (23:42 +0200)]
gnu: r-delayedmatrixstats: Update to 1.6.0.

* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.6.0.

5 years agognu: Add r-biocfilecache.
Ricardo Wurmus [Sun, 5 May 2019 21:41:50 +0000 (23:41 +0200)]
gnu: Add r-biocfilecache.

* gnu/packages/bioconductor.scm (r-biocfilecache): New variable.

5 years agognu: r-interactivedisplaybase: Update to 1.22.0.
Ricardo Wurmus [Sun, 5 May 2019 21:41:03 +0000 (23:41 +0200)]
gnu: r-interactivedisplaybase: Update to 1.22.0.

* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.22.0.

5 years agognu: r-edaseq: Update to 2.18.0.
Ricardo Wurmus [Sun, 5 May 2019 21:40:55 +0000 (23:40 +0200)]
gnu: r-edaseq: Update to 2.18.0.

* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.18.0.

5 years agognu: r-deseq: Update to 1.36.0.
Ricardo Wurmus [Sun, 5 May 2019 21:40:47 +0000 (23:40 +0200)]
gnu: r-deseq: Update to 1.36.0.

* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.36.0.

5 years agognu: r-aroma-light: Update to 3.14.0.
Ricardo Wurmus [Sun, 5 May 2019 21:40:39 +0000 (23:40 +0200)]
gnu: r-aroma-light: Update to 3.14.0.

* gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.14.0.

5 years agognu: r-msnid: Update to 1.18.0.
Ricardo Wurmus [Sun, 5 May 2019 21:40:30 +0000 (23:40 +0200)]
gnu: r-msnid: Update to 1.18.0.

* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.18.0.

5 years agognu: r-msnbase: Update to 2.10.0.
Ricardo Wurmus [Sun, 5 May 2019 21:40:21 +0000 (23:40 +0200)]
gnu: r-msnbase: Update to 2.10.0.

* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.10.0.

5 years agognu: r-pcamethods: Update to 1.76.0.
Ricardo Wurmus [Sun, 5 May 2019 21:40:12 +0000 (23:40 +0200)]
gnu: r-pcamethods: Update to 1.76.0.

* gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.76.0.

5 years agognu: r-mzid: Update to 1.22.0.
Ricardo Wurmus [Sun, 5 May 2019 21:40:04 +0000 (23:40 +0200)]
gnu: r-mzid: Update to 1.22.0.

* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.22.0.

5 years agognu: r-vsn: Update to 3.52.0.
Ricardo Wurmus [Sun, 5 May 2019 21:39:56 +0000 (23:39 +0200)]
gnu: r-vsn: Update to 3.52.0.

* gnu/packages/bioinformatics.scm (r-vsn): Update to 3.52.0.

5 years agognu: r-affy: Update to 1.62.0.
Ricardo Wurmus [Sun, 5 May 2019 21:39:48 +0000 (23:39 +0200)]
gnu: r-affy: Update to 1.62.0.

* gnu/packages/bioinformatics.scm (r-affy): Update to 1.62.0.

5 years agognu: r-affyio: Update to 1.54.0.
Ricardo Wurmus [Sun, 5 May 2019 21:39:40 +0000 (23:39 +0200)]
gnu: r-affyio: Update to 1.54.0.

* gnu/packages/bioinformatics.scm (r-affyio): Update to 1.54.0.

5 years agognu: r-mzr: Update to 2.18.0.
Ricardo Wurmus [Sun, 5 May 2019 21:39:30 +0000 (23:39 +0200)]
gnu: r-mzr: Update to 2.18.0.

* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.18.0.

5 years agognu: r-protgenerics: Update to 1.16.0.
Ricardo Wurmus [Sun, 5 May 2019 21:39:18 +0000 (23:39 +0200)]
gnu: r-protgenerics: Update to 1.16.0.

* gnu/packages/bioinformatics.scm (r-protgenerics): Update to 1.16.0.

5 years agognu: r-sva: Update to 3.32.0.
Ricardo Wurmus [Sun, 5 May 2019 21:37:01 +0000 (23:37 +0200)]
gnu: r-sva: Update to 3.32.0.

* gnu/packages/bioinformatics.scm (r-sva): Update to 3.32.0.

5 years agognu: r-copywriter: Update to 2.16.0.
Ricardo Wurmus [Sun, 5 May 2019 21:36:48 +0000 (23:36 +0200)]
gnu: r-copywriter: Update to 2.16.0.

* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.16.0.

5 years agognu: r-chipseq: Update to 1.34.0.
Ricardo Wurmus [Sun, 5 May 2019 21:36:40 +0000 (23:36 +0200)]
gnu: r-chipseq: Update to 1.34.0.

* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.34.0.

5 years agognu: r-annotationfilter: Update to 1.8.0.
Ricardo Wurmus [Sun, 5 May 2019 21:36:32 +0000 (23:36 +0200)]
gnu: r-annotationfilter: Update to 1.8.0.

* gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.8.0.

5 years agognu: r-rhdf5: Update to 2.28.0.
Ricardo Wurmus [Sun, 5 May 2019 21:36:22 +0000 (23:36 +0200)]
gnu: r-rhdf5: Update to 2.28.0.

* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.28.0.

5 years agognu: r-tximport: Update to 1.12.0.
Ricardo Wurmus [Sun, 5 May 2019 21:35:48 +0000 (23:35 +0200)]
gnu: r-tximport: Update to 1.12.0.

* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.12.0.

5 years agognu: r-mutationalpatterns: Update to 1.10.0.
Ricardo Wurmus [Sun, 5 May 2019 21:35:39 +0000 (23:35 +0200)]
gnu: r-mutationalpatterns: Update to 1.10.0.

* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.10.0.

5 years agognu: r-bamsignals: Update to 1.16.0.
Ricardo Wurmus [Sun, 5 May 2019 21:35:24 +0000 (23:35 +0200)]
gnu: r-bamsignals: Update to 1.16.0.

* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.16.0.

5 years agognu: r-rhtslib: Update to 1.16.1.
Ricardo Wurmus [Sun, 5 May 2019 21:35:16 +0000 (23:35 +0200)]
gnu: r-rhtslib: Update to 1.16.1.

* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.16.1.

5 years agognu: r-zlibbioc: Update to 1.30.0.
Ricardo Wurmus [Sun, 5 May 2019 21:35:08 +0000 (23:35 +0200)]
gnu: r-zlibbioc: Update to 1.30.0.

* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.30.0.

5 years agognu: r-motifrg: Update to 1.28.0.
Ricardo Wurmus [Sun, 5 May 2019 21:34:59 +0000 (23:34 +0200)]
gnu: r-motifrg: Update to 1.28.0.

* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.28.0.

5 years agognu: r-seqlogo: Update to 1.50.0.
Ricardo Wurmus [Sun, 5 May 2019 21:34:51 +0000 (23:34 +0200)]
gnu: r-seqlogo: Update to 1.50.0.

* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.50.0.