jackhill/guix/guix.git
3 years agognu: Add mediasdk.
Raghav Gururajan [Fri, 3 Jul 2020 14:59:03 +0000 (10:59 -0400)]
gnu: Add mediasdk.

* gnu/packages/video.scm (mediasdk): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add srt.
Raghav Gururajan [Fri, 3 Jul 2020 13:44:14 +0000 (09:44 -0400)]
gnu: Add srt.

* gnu/packages/networking.scm (srt): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add lksctp-tools.
Raghav Gururajan [Fri, 3 Jul 2020 13:43:19 +0000 (09:43 -0400)]
gnu: Add lksctp-tools.

* gnu/packages/networking.scm (lksctp-tools): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add tinyalsa.
Raghav Gururajan [Fri, 3 Jul 2020 13:41:39 +0000 (09:41 -0400)]
gnu: Add tinyalsa.

* gnu/packages/audio.scm (tinyalsa): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libopenmpt.
Raghav Gururajan [Fri, 3 Jul 2020 13:40:24 +0000 (09:40 -0400)]
gnu: Add libopenmpt.

* gnu/packages/audio.scm (libopenmpt): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libofa.
Raghav Gururajan [Fri, 3 Jul 2020 13:16:01 +0000 (09:16 -0400)]
gnu: Add libofa.

* gnu/packages/audio.scm (libofa): New variable.
* gnu/packages/patches/libofa-ftbfs-1.diff: New file.
* gnu/packages/patches/libofa-curl.diff: New file.
* gnu/packages/patches/libofa-ftbfs-2.diff: New file.
* gnu/local.mk (dist_patch_DATA): Add them.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add mjpegtools.
Raghav Gururajan [Fri, 3 Jul 2020 12:07:02 +0000 (08:07 -0400)]
gnu: Add mjpegtools.

* gnu/packages/video.scm (mjpegtools): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libquicktime.
Raghav Gururajan [Fri, 3 Jul 2020 12:03:40 +0000 (08:03 -0400)]
gnu: Add libquicktime.

* gnu/packages/video.scm (libquicktime): New variable.
* gnu/packages/patches/libquicktime-ffmpeg.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add schroedinger.
Raghav Gururajan [Fri, 3 Jul 2020 11:14:26 +0000 (07:14 -0400)]
gnu: Add schroedinger.

* gnu/packages/video.scm (schroedinger): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libmms.
Raghav Gururajan [Fri, 3 Jul 2020 11:12:48 +0000 (07:12 -0400)]
gnu: Add libmms.

* gnu/packages/video.scm (libmms): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libde265.
Raghav Gururajan [Thu, 2 Jul 2020 13:56:33 +0000 (09:56 -0400)]
gnu: Add libde265.

* gnu/packages/video.scm (libde265): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libvideogfx.
Raghav Gururajan [Thu, 2 Jul 2020 13:10:19 +0000 (09:10 -0400)]
gnu: Add libvideogfx.

* gnu/packages/video.scm (libvideogfx): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add ffmpeg-2.8.
Raghav Gururajan [Thu, 2 Jul 2020 09:52:47 +0000 (05:52 -0400)]
gnu: Add ffmpeg-2.8.

* gnu/packages/video.scm (ffmpeg-2.8): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add flite.
Raghav Gururajan [Thu, 2 Jul 2020 05:55:56 +0000 (01:55 -0400)]
gnu: Add flite.

* gnu/packages/speech.scm (flite): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add faac.
Raghav Gururajan [Wed, 1 Jul 2020 10:06:41 +0000 (06:06 -0400)]
gnu: Add faac.

* gnu/packages/audio.scm (faac): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add directfb.
Raghav Gururajan [Wed, 1 Jul 2020 10:00:23 +0000 (06:00 -0400)]
gnu: Add directfb.

* gnu/packages/graphics.scm (directfb): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libtimidity.
Raghav Gururajan [Wed, 1 Jul 2020 09:55:02 +0000 (05:55 -0400)]
gnu: Add libtimidity.

* gnu/packages/audio.scm (libtimidity): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add flux.
Raghav Gururajan [Wed, 1 Jul 2020 05:04:20 +0000 (01:04 -0400)]
gnu: Add flux.

* gnu/packages/graphics.scm (flux): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add tslib.
Raghav Gururajan [Wed, 1 Jul 2020 04:45:50 +0000 (00:45 -0400)]
gnu: Add tslib.

* gnu/packages/video.scm (tslib): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libmpeg3.
Raghav Gururajan [Wed, 1 Jul 2020 04:24:40 +0000 (00:24 -0400)]
gnu: Add libmpeg3.

* gnu/packages/video.scm (libmpeg3): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libdc1394.
Raghav Gururajan [Mon, 29 Jun 2020 07:05:39 +0000 (03:05 -0400)]
gnu: Add libdc1394.

* gnu/packages/gstreamer.scm (libdc1394): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add ccextractor.
Raghav Gururajan [Mon, 29 Jun 2020 05:58:27 +0000 (01:58 -0400)]
gnu: Add ccextractor.

* gnu/packages/gstreamer.scm (ccextractor): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add nng.
Raghav Gururajan [Mon, 29 Jun 2020 05:48:27 +0000 (01:48 -0400)]
gnu: Add nng.

* gnu/packages/networking.scm (nng): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add nanomsg.
Raghav Gururajan [Mon, 29 Jun 2020 05:39:30 +0000 (01:39 -0400)]
gnu: Add nanomsg.

* gnu/packages/networking.scm (nanomsg): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libvisual-plugins.
Raghav Gururajan [Thu, 25 Jun 2020 03:44:23 +0000 (23:44 -0400)]
gnu: Add libvisual-plugins.

* gnu/packages/gstreamer.scm (libvisual-plugins): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libvisual.
Raghav Gururajan [Thu, 25 Jun 2020 03:38:53 +0000 (23:38 -0400)]
gnu: Add libvisual.

* gnu/packages/gstreamer.scm (libvisual): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add esound.
Raghav Gururajan [Thu, 11 Jun 2020 10:31:26 +0000 (06:31 -0400)]
gnu: Add esound.

* gnu/packages/gstreamer.scm (esound): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add mutest.
Raghav Gururajan [Tue, 9 Jun 2020 13:43:01 +0000 (09:43 -0400)]
gnu: Add mutest.

* gnu/packages/check.scm (mutest): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add sysprof.
Raghav Gururajan [Sat, 6 Jun 2020 02:22:56 +0000 (22:22 -0400)]
gnu: Add sysprof.

* gnu/packages/gnome.scm (sysprof): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add presage.
Raghav Gururajan [Tue, 2 Jun 2020 23:41:00 +0000 (19:41 -0400)]
gnu: Add presage.

* gnu/packages/fcitx.scm (presage): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add nuspell.
Raghav Gururajan [Sat, 30 May 2020 19:28:31 +0000 (15:28 -0400)]
gnu: Add nuspell.

* gnu/packages/enchant.scm (nuspell): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add ronn.
Raghav Gururajan [Sat, 30 May 2020 19:05:13 +0000 (15:05 -0400)]
gnu: Add ronn.

* gnu/packages/man.scm (ronn): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add gnome-photos.
Raghav Gururajan [Sat, 23 May 2020 14:09:29 +0000 (10:09 -0400)]
gnu: Add gnome-photos.

* gnu/packages/gnome.scm (gnome-photos): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add gnome-music.
Raghav Gururajan [Fri, 22 May 2020 18:50:21 +0000 (14:50 -0400)]
gnu: Add gnome-music.

* gnu/packages/gnome.scm (gnome-music): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libxmlb.
Raghav Gururajan [Fri, 22 May 2020 11:06:27 +0000 (07:06 -0400)]
gnu: Add libxmlb.

* gnu/packages/xml.scm (libxmlb): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add portablexdr.
Raghav Gururajan [Fri, 22 May 2020 10:22:10 +0000 (06:22 -0400)]
gnu: Add portablexdr.

* gnu/packages/gnome.scm (portablexdr): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add malcontent.
Raghav Gururajan [Thu, 21 May 2020 15:35:25 +0000 (11:35 -0400)]
gnu: Add malcontent.

* gnu/packages/freedesktop.scm (malcontent): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add libglib-testing.
Raghav Gururajan [Thu, 21 May 2020 15:31:31 +0000 (11:31 -0400)]
gnu: Add libglib-testing.

* gnu/packages/freedesktop.scm (libglib-testing): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add tepl.
Raghav Gururajan [Thu, 21 May 2020 11:20:47 +0000 (07:20 -0400)]
gnu: Add tepl.

* gnu/packages/gnome.scm (tepl): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: Add krb5-auth-dialog.
Raghav Gururajan [Thu, 21 May 2020 09:26:27 +0000 (05:26 -0400)]
gnu: Add krb5-auth-dialog.

* gnu/packages/gnome.scm (krb5-auth-dialog): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
3 years agognu: mpfrcx: Update to 0.6.
Andreas Enge [Tue, 18 Aug 2020 14:50:32 +0000 (16:50 +0200)]
gnu: mpfrcx: Update to 0.6.

* gnu/packages/algebra.scm (mpfrcx): Update to 0.6.

3 years agognu: txr: Update to 242.
Guillaume Le Vaillant [Tue, 18 Aug 2020 13:05:29 +0000 (15:05 +0200)]
gnu: txr: Update to 242.

* gnu/packages/lisp.scm (txr): Update to 242.

3 years agognu: guile2.2-gi: Fix build.
Ricardo Wurmus [Tue, 18 Aug 2020 11:25:15 +0000 (13:25 +0200)]
gnu: guile2.2-gi: Fix build.

* gnu/packages/guile-xyz.scm (guile2.2-gi)[native-inputs]: Remove.
[inputs]: Replace "guile" with "guile-2.2".

3 years agognu: guile-gi: Install extension to sub-directory, use glib-or-gtk build system.
Ricardo Wurmus [Tue, 18 Aug 2020 11:15:55 +0000 (13:15 +0200)]
gnu: guile-gi: Install extension to sub-directory, use glib-or-gtk build system.

* gnu/packages/guile-xyz.scm (guile-gi)[build-system]: Use
glib-or-gtk-build-system.
[arguments]: Install the extension to the "extensions" sub-directory.

3 years agognu: bowtie1: Add missing Python input.
Ricardo Wurmus [Tue, 18 Aug 2020 10:38:38 +0000 (12:38 +0200)]
gnu: bowtie1: Add missing Python input.

Reported-by: Marcel Schilling <marcel.schilling@mdc-berlin.de>
* gnu/packages/bioinformatics.scm (bowtie1)[inputs]: Add python-wrapper.

3 years agognu: Add r-nabor.
Ricardo Wurmus [Tue, 18 Aug 2020 10:18:02 +0000 (12:18 +0200)]
gnu: Add r-nabor.

* gnu/packages/cran.scm (r-nabor): New variable.

3 years agognu: ghcid: Update to 0.8.7.
Tobias Geerinckx-Rice [Tue, 18 Aug 2020 02:20:34 +0000 (04:20 +0200)]
gnu: ghcid: Update to 0.8.7.

* gnu/packages/haskell-apps.scm (ghcid): Update to 0.8.7.

3 years agognu: python-igraph: Update to 0.8.2.
Tobias Geerinckx-Rice [Tue, 18 Aug 2020 01:48:13 +0000 (03:48 +0200)]
gnu: python-igraph: Update to 0.8.2.

* gnu/packages/graph.scm (python-igraph): Update to 0.8.2.

3 years agognu: igraph: Update to 0.8.2.
Tobias Geerinckx-Rice [Tue, 18 Aug 2020 01:47:48 +0000 (03:47 +0200)]
gnu: igraph: Update to 0.8.2.

* gnu/packages/graph.scm (igraph): Update to 0.8.2.

3 years agognu: cfitsio: Update to 3.49.
Tobias Geerinckx-Rice [Tue, 18 Aug 2020 01:38:33 +0000 (03:38 +0200)]
gnu: cfitsio: Update to 3.49.

* gnu/packages/astronomy.scm (cfitsio): Update to 3.49.
[source]: Hard-code NAME.

3 years agognu: jc: Update to 1.13.4.
Tobias Geerinckx-Rice [Tue, 18 Aug 2020 01:26:48 +0000 (03:26 +0200)]
gnu: jc: Update to 1.13.4.

* gnu/packages/admin.scm (jc): Update to 1.13.4.

3 years agognu: blender: Update to 2.83.4.
Tobias Geerinckx-Rice [Sun, 16 Aug 2020 22:07:14 +0000 (00:07 +0200)]
gnu: blender: Update to 2.83.4.

* gnu/packages/graphics.scm (blender): Update to 2.83.4.

3 years agodoc: Fix a typo in the AutoSSH service documentation.
Maxim Cournoyer [Mon, 17 Aug 2020 19:38:03 +0000 (15:38 -0400)]
doc: Fix a typo in the AutoSSH service documentation.

* doc/guix.texi (Networking Services)[autossh-configuration]: Fix typo.

3 years agognu: rclone: Update to 1.52.3.
Nicolas Goaziou [Mon, 17 Aug 2020 15:33:47 +0000 (17:33 +0200)]
gnu: rclone: Update to 1.52.3.

* gnu/packages/sync.scm (rclone): Update to 1.52.3.

3 years agognu: git-annex: Create fake static output.
Timothy Sample [Mon, 17 Aug 2020 15:03:58 +0000 (11:03 -0400)]
gnu: git-annex: Create fake static output.

This is a work-around for a problem introduced by commit
718dc7d4a5e5d26cac80c79d78535677e0379dc8.

* gnu/packages/haskell-apps.scm (git-annex)[arguments]: Add a phase
to generate the "static" output.

3 years agognu: fet: Update to 5.46.0.
Nicolas Goaziou [Mon, 17 Aug 2020 13:23:04 +0000 (15:23 +0200)]
gnu: fet: Update to 5.46.0.

* gnu/packages/education.scm (fet): Update to 5.46.0.

3 years agognu: mame: Update to 0.223.
Nicolas Goaziou [Mon, 17 Aug 2020 13:05:20 +0000 (15:05 +0200)]
gnu: mame: Update to 0.223.

* gnu/packages/emulators.scm (mame): Update to 0.223.

3 years agognu: emacs-clojure-mode: Update to 5.12.0.
Nicolas Goaziou [Mon, 17 Aug 2020 08:39:22 +0000 (10:39 +0200)]
gnu: emacs-clojure-mode: Update to 5.12.0.

* gnu/packages/emacs-xyz.scm (emacs-clojure-mode): Update to 5.12.0.
[native-inputs]: Add emacs-paredit.

3 years agognu: emacs-ediprolog: Update to 2.1.
Nicolas Goaziou [Mon, 17 Aug 2020 08:36:30 +0000 (10:36 +0200)]
gnu: emacs-ediprolog: Update to 2.1.

* gnu/packages/emacs-xyz.scm (emacs-ediprolog): Update to 2.1.

3 years agognu: emacs-gnuplot: Switch to Emacs build system.
Nicolas Goaziou [Mon, 17 Aug 2020 08:31:57 +0000 (10:31 +0200)]
gnu: emacs-gnuplot: Switch to Emacs build system.

* gnu/packages/emacs-xyz.scm (emacs-gnuplot)[source]: Update URL.
[native-inputs]: Remove.
[arguments]: Remove.
[home-page]: Update URL.
[description]: Improve typography.

3 years agognu: vim: Update to 8.2.1471.
Efraim Flashner [Mon, 17 Aug 2020 08:06:47 +0000 (11:06 +0300)]
gnu: vim: Update to 8.2.1471.

* gnu/packages/vim.scm (vim): Update to 8.2.1471.
[arguments]: Adjust custom 'patch-absolute-paths, 'skip-failing-tests
phases for changes in the sources.

3 years agognu: python-rpy2: Update home-page.
Efraim Flashner [Mon, 17 Aug 2020 07:08:42 +0000 (10:08 +0300)]
gnu: python-rpy2: Update home-page.

* gnu/packages/statistics.scm (python-rpy2)[home-page]: Update to new
home-page.

3 years agognu: Add emacs-fancy-battery.
Pierre Langlois [Sun, 16 Aug 2020 18:19:09 +0000 (19:19 +0100)]
gnu: Add emacs-fancy-battery.

* gnu/packages/emacs-xyz.scm (emacs-fancy-battery): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
3 years agoutils: Add version-major+minor+point.
Efraim Flashner [Thu, 13 Aug 2020 11:47:27 +0000 (14:47 +0300)]
utils: Add version-major+minor+point.

* guix/utils.scm (version-major+minor+point): New procedure.

3 years agognu: Add python-hypercorn.
Vinicius Monego [Sun, 16 Aug 2020 20:07:26 +0000 (17:07 -0300)]
gnu: Add python-hypercorn.

* gnu/packages/python-web.scm (python-hypercorn): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
3 years agognu: Add python-priority.
Vinicius Monego [Sun, 16 Aug 2020 20:07:25 +0000 (17:07 -0300)]
gnu: Add python-priority.

* gnu/packages/python-web.scm (python-priority): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
3 years agognu: Add python-wsproto.
Vinicius Monego [Sun, 16 Aug 2020 20:07:24 +0000 (17:07 -0300)]
gnu: Add python-wsproto.

* gnu/packages/python-web.scm (python-wsproto): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
3 years agognu: Add python-h11.
Vinicius Monego [Sun, 16 Aug 2020 20:04:54 +0000 (17:04 -0300)]
gnu: Add python-h11.

* gnu/packages/python-web.scm (python-h11): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
3 years agognu: guile-ssh: Update to commit 688d7f.
Maxim Cournoyer [Mon, 17 Aug 2020 02:42:10 +0000 (22:42 -0400)]
gnu: guile-ssh: Update to commit 688d7f.

Fixes <https://issues.guix.gnu.org/42740>.

* gnu/packages/ssh.scm (guile-ssh): Update to commit
688d7f3797b5155257a6c2ee4ea5084b3d8cc244.
[arguments]: Enable parallel tests.

Reported-by: Ludovic Courtès <ludo@gnu.org>
3 years agognu: weechat: Update to 2.9.
Tobias Geerinckx-Rice [Sun, 16 Aug 2020 19:18:59 +0000 (21:18 +0200)]
gnu: weechat: Update to 2.9.

* gnu/packages/irc.scm (weechat): Update to 2.9.
[arguments]: Remove obsolete test fixes.  JavaScript plugins are now
disabled by default.

3 years agognu: gpsd: Update to 3.21.
Tobias Geerinckx-Rice [Sun, 16 Aug 2020 19:03:18 +0000 (21:03 +0200)]
gnu: gpsd: Update to 3.21.

* gnu/packages/gps.scm (gpsd): Update to 3.21.

3 years agognu: srain: Update to 1.1.2.
Tobias Geerinckx-Rice [Sun, 16 Aug 2020 18:44:10 +0000 (20:44 +0200)]
gnu: srain: Update to 1.1.2.

* gnu/packages/irc.scm (srain): Update to 1.1.2.

3 years agognu: grim: Update to 1.3.1.
Tobias Geerinckx-Rice [Sun, 16 Aug 2020 18:41:41 +0000 (20:41 +0200)]
gnu: grim: Update to 1.3.1.

* gnu/packages/image.scm (grim): Update to 1.3.1.

3 years agognu: emacs-slime: Update to 2.26.
Tobias Geerinckx-Rice [Sun, 16 Aug 2020 21:35:43 +0000 (23:35 +0200)]
gnu: emacs-slime: Update to 2.26.

* gnu/packages/emacs-xyz.scm (emacs-slime): Update to 2.26.

3 years agognu: wxwidgets: Fix MIME type loading.
Kei Kebreau [Fri, 31 Jul 2020 03:21:45 +0000 (23:21 -0400)]
gnu: wxwidgets: Fix MIME type loading.

* gnu/packages/wxwidgets.scm (wxwidgets)[inputs]: Add shared-mime-info.
[arguments]: Update 'refer-to-inputs phase so wxwidgets looks in the correct
directory for MIME type information.

3 years agognu: wxmaxima: Update to 20.06.6.
Kei Kebreau [Fri, 31 Jul 2020 03:20:38 +0000 (23:20 -0400)]
gnu: wxmaxima: Update to 20.06.6.

* gnu/packages/maths.scm (wxmaxima): Update to 20.06.6.
[arguments]: Add 'patch-doc-path phase.

3 years agognu: webkitgtk: Expose all font locations to the bubblewrap sandbox.
Leo Prikler [Sat, 15 Aug 2020 05:03:53 +0000 (01:03 -0400)]
gnu: webkitgtk: Expose all font locations to the bubblewrap sandbox.

Fixes <https://issues.guix.gnu.org/41174> and <https://issues.guix.gnu.org/42618>.

The webkitgtk library relied on by Epiphany and others uses bubblewrap to
sandbox its process.  This sandbox was only exposing fonts relative to
XDG_DATA_HOME.  Extend it so that it honors font locations specified via
XDG_DATA_DIRS as well, which is what Guix uses.

* gnu/packages/patches/webkitgtk-bind-all-fonts.patch: Add patch.
* gnu/local.mk: Register it.
* gnu/packages/webkit.scm (webkitgtk)[source]<patches>: Use it.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
3 years agognu: emacs-guix: Update to 0.5.2-58a840d067.
Jan (janneke) Nieuwenhuizen [Sun, 16 Aug 2020 18:17:14 +0000 (20:17 +0200)]
gnu: emacs-guix: Update to 0.5.2-58a840d067.

This fixes several missing autoloads (for Guile 3.0).

* gnu/packages/emacs-xyz.scm (emacs-guix): Update to 0.5.2-58a840d067.

3 years agognu: pigx-bsseq: Update to 0.1.2.
Ricardo Wurmus [Sun, 16 Aug 2020 13:56:22 +0000 (15:56 +0200)]
gnu: pigx-bsseq: Update to 0.1.2.

* gnu/packages/bioinformatics.scm (pigx-bsseq): Update to 0.1.2.
[inputs]: Add r-ggrepel, bwa-meth, methyldackel, multiqc, and samblaster.

3 years agognu: pigx-scrnaseq: Use statically linked Pandoc.
Ricardo Wurmus [Sun, 16 Aug 2020 13:29:01 +0000 (15:29 +0200)]
gnu: pigx-scrnaseq: Use statically linked Pandoc.

* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Use pandoc and
pandoc-citeproc instead of ghc-pandoc and ghc-pandoc-citeproc.

3 years agognu: pigx-bsseq: Use statically linked Pandoc.
Ricardo Wurmus [Sun, 16 Aug 2020 13:28:42 +0000 (15:28 +0200)]
gnu: pigx-bsseq: Use statically linked Pandoc.

* gnu/packages/bioinformatics.scm (pigx-bsseq)[inputs]: Use pandoc and
pandoc-citeproc instead of ghc-pandoc and ghc-pandoc-citeproc.

3 years agognu: pigx-chipseq: Use statically linked Pandoc.
Ricardo Wurmus [Sun, 16 Aug 2020 13:28:06 +0000 (15:28 +0200)]
gnu: pigx-chipseq: Use statically linked Pandoc.

* gnu/packages/bioinformatics.scm (pigx-chipseq)[inputs]: Use pandoc and
pandoc-citeproc instead of ghc-pandoc and ghc-pandoc-citeproc.

3 years agognu: pigx-rnaseq: Use statically linked Pandoc.
Ricardo Wurmus [Sun, 16 Aug 2020 13:27:14 +0000 (15:27 +0200)]
gnu: pigx-rnaseq: Use statically linked Pandoc.

* gnu/packages/bioinformatics.scm (pigx-rnaseq)[inputs]: Use pandoc and
pandoc-citeproc instead of ghc-pandoc and ghc-pandoc-citeproc.

3 years agognu: r-loo: Use pandoc and pandoc-citeproc instead of the libraries.
Ricardo Wurmus [Sun, 16 Aug 2020 13:26:17 +0000 (15:26 +0200)]
gnu: r-loo: Use pandoc and pandoc-citeproc instead of the libraries.

* gnu/packages/cran.scm (r-loo)[inputs]: Replace ghc-pandoc with pandoc, and
ghc-pandoc-citeproc with pandoc-citeproc.

3 years agognu: r-rstan: Use pandoc instead of ghc-pandoc.
Ricardo Wurmus [Sat, 15 Aug 2020 14:51:56 +0000 (16:51 +0200)]
gnu: r-rstan: Use pandoc instead of ghc-pandoc.

* gnu/packages/cran.scm (r-rstan)[native-inputs]: Replace ghc-pandoc with
pandoc.

3 years agognu: r-rstantools: Use pandoc instead of ghc-pandoc.
Ricardo Wurmus [Sat, 15 Aug 2020 14:51:26 +0000 (16:51 +0200)]
gnu: r-rstantools: Use pandoc instead of ghc-pandoc.

* gnu/packages/cran.scm (r-rstantools)[inputs]: Replace ghc-pandoc with
pandoc.

3 years agognu: r-stanheaders: Use pandoc instead of ghc-pandoc.
Ricardo Wurmus [Sat, 15 Aug 2020 14:51:01 +0000 (16:51 +0200)]
gnu: r-stanheaders: Use pandoc instead of ghc-pandoc.

* gnu/packages/cran.scm (r-stanheaders)[inputs]: Replace ghc-pandoc with
pandoc.

3 years agognu: r-rstanarm: Use pandoc instead of ghc-pandoc.
Ricardo Wurmus [Sat, 15 Aug 2020 14:49:52 +0000 (16:49 +0200)]
gnu: r-rstanarm: Use pandoc instead of ghc-pandoc.

* gnu/packages/cran.scm (r-rstanarm)[inputs]: Replace ghc-pandoc with pandoc
and ghc-pandoc-citeproc with pandoc-citeproc.

3 years agognu: r-nbconvertr: Use pandoc instead of ghc-pandoc.
Ricardo Wurmus [Sat, 15 Aug 2020 14:38:04 +0000 (16:38 +0200)]
gnu: r-nbconvertr: Use pandoc instead of ghc-pandoc.

* gnu/packages/cran.scm (r-nbconvertr)[inputs]: Replace ghc-pandoc with
pandoc.

3 years agognu: r-abseqr: Add pandoc-citeproc.
Ricardo Wurmus [Sat, 15 Aug 2020 14:37:11 +0000 (16:37 +0200)]
gnu: r-abseqr: Add pandoc-citeproc.

* gnu/packages/bioconductor.scm (r-abseqr)[inputs]: Add pandoc-citeproc.

3 years agognu: r-abseqr: Use pandoc instead of ghc-pandoc.
Ricardo Wurmus [Sat, 15 Aug 2020 14:36:45 +0000 (16:36 +0200)]
gnu: r-abseqr: Use pandoc instead of ghc-pandoc.

* gnu/packages/bioconductor.scm (r-abseqr)[inputs]: Replace ghc-pandoc with
pandoc.

3 years agognu: r-filematrix: Use pandoc-citeproc instead of ghc-pandoc-citeproc.
Ricardo Wurmus [Sat, 15 Aug 2020 14:29:36 +0000 (16:29 +0200)]
gnu: r-filematrix: Use pandoc-citeproc instead of ghc-pandoc-citeproc.

* gnu/packages/cran.scm (r-filematrix)[native-inputs]: Replace
ghc-pandoc-citeproc with pandoc-citeproc.

3 years agognu: r-bookdown: Use pandoc instead of ghc-pandoc.
Ricardo Wurmus [Sat, 15 Aug 2020 14:27:51 +0000 (16:27 +0200)]
gnu: r-bookdown: Use pandoc instead of ghc-pandoc.

* gnu/packages/cran.scm (r-bookdown)[propagated-inputs]: Replace ghc-pandoc
with pandoc.

3 years agognu: r-rgl: Use pandoc instead of ghc-pandoc.
Ricardo Wurmus [Sat, 15 Aug 2020 14:26:32 +0000 (16:26 +0200)]
gnu: r-rgl: Use pandoc instead of ghc-pandoc.

* gnu/packages/cran.scm (r-rgl)[inputs]: Replace ghc-pandoc with pandoc.

3 years agognu: r-bayesplot: Use pandoc instead of ghc-pandoc
Ricardo Wurmus [Sat, 15 Aug 2020 14:06:31 +0000 (16:06 +0200)]
gnu: r-bayesplot: Use pandoc instead of ghc-pandoc

* gnu/packages/cran.scm (r-bayesplot)[inputs]: Replace ghc-pandoc with pandoc.

3 years agognu: r-rcas: Use pandoc instead of ghc-pandoc.
Ricardo Wurmus [Sat, 15 Aug 2020 13:48:07 +0000 (15:48 +0200)]
gnu: r-rcas: Use pandoc instead of ghc-pandoc.

* gnu/packages/bioinformatics.scm (r-rcas)[propagated-inputs]: Replace
ghc-pandoc with pandoc.

3 years agoservices: connman-shepherd-service: Don't use short flags.
Efraim Flashner [Sun, 16 Aug 2020 13:33:43 +0000 (16:33 +0300)]
services: connman-shepherd-service: Don't use short flags.

* gnu/services/networking.scm (connman-shepherd-service): Use the long
flag options for the start command.

3 years agognu: ola: Build with protobuf@3.
Tobias Geerinckx-Rice [Sun, 16 Aug 2020 10:15:48 +0000 (12:15 +0200)]
gnu: ola: Build with protobuf@3.

* gnu/packages/lighting.scm (ola)[propagated-inputs]: Use default protobuf version.

3 years agognu: ola: Build with libmicrohttpd 0.9.71.
Tobias Geerinckx-Rice [Sun, 16 Aug 2020 10:08:37 +0000 (12:08 +0200)]
gnu: ola: Build with libmicrohttpd 0.9.71.

* gnu/packages/lighting.scm (ola)[source]: Update to 0.10.7-0.5d88293.
[source]: Use GIT-FETCH & GIT-FILE-NAME.  Remove patch.
[native-inputs]: Add autoconf, automake, and libtool.
* gnu/packages/patches/ola-readdir-r.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

3 years agognu: Add kxstitch.
Christopher Baines [Sat, 15 Aug 2020 20:17:51 +0000 (21:17 +0100)]
gnu: Add kxstitch.

* gnu/packages/kde-utils.scm (kxstitch): New variable.