HCoop Git - jackhill/guix/guix.git/log

HCoop / jackhill / guix / guix.git / log

Meiyo Peng [Wed, 13 Mar 2019 15:37:27 +0000 (23:37 +0800)]

gnu: lxqt-qtplugin: Update to 0.14.0.

* gnu/packages/lxqt.scm (lxqt-qtplugin): Update to 0.14.0.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:26 +0000 (23:37 +0800)]

gnu: lxqt-powermanagement: Update to 0.14.1.

* gnu/packages/lxqt.scm (lxqt-powermanagement): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:25 +0000 (23:37 +0800)]

gnu: lxqt-policykit: Update to 0.14.1.

* gnu/packages/lxqt.scm (lxqt-policykit): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:24 +0000 (23:37 +0800)]

gnu: lxqt-panel: Update to 0.14.1.

* gnu/packages/lxqt.scm (lxqt-panel): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:23 +0000 (23:37 +0800)]

gnu: lxqt-openssh-askpass: Update to 0.14.1.

* gnu/packages/lxqt.scm (lxqt-openssh-askpass): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:22 +0000 (23:37 +0800)]

gnu: lxqt-notificationd: Update to 0.14.1.

* gnu/packages/lxqt.scm (lxqt-notificationd): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:21 +0000 (23:37 +0800)]

gnu: lxqt-globalkeys: Update to 0.14.1.

* gnu/packages/lxqt.scm (lxqt-globalkeys): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:20 +0000 (23:37 +0800)]

gnu: lxqt-config: Update to 0.14.1.

* gnu/packages/lxqt.scm (lxqt-config): Update to 0.14.1.
[inputs]: Add eudev, libxi, xf86-input-libinput.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:19 +0000 (23:37 +0800)]

gnu: lxqt-admin: Update to 0.14.1.

* gnu/packages/lxqt.scm (lxqt-admin): Update to 0.14.1.
[arguments]: Remove #:configure-flags
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:18 +0000 (23:37 +0800)]

gnu: lxqt-about: Update to 0.14.1.

* gnu/packages/lxqt.scm (lxqt-about): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:17 +0000 (23:37 +0800)]

gnu: libsysstat: Update to 0.4.2.

* gnu/packages/lxqt.scm (libsysstat): Update to 0.4.2.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:16 +0000 (23:37 +0800)]

gnu: liblxqt: Update to 0.14.1.

* gnu/packages/lxqt.scm (liblxqt): Update to 0.14.1.
[arguments]: Remove #:configure-flags. Add 'patch-translations-dir' phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:15 +0000 (23:37 +0800)]

gnu: libqtxdg: Update to 3.3.1.

* gnu/packages/lxqt.scm (libqtxdg): Update to 3.3.1.
[native-inputs]: Add lxqt-build-tools.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:14 +0000 (23:37 +0800)]

gnu: lxqt-build-tools: Update to 0.6.0.

* gnu/packages/lxqt.scm (lxqt-build-tools): Update to 0.6.0.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:13 +0000 (23:37 +0800)]

gnu: libfm: Update to 1.3.1.

* gnu/packages/lxde.scm (libfm): Update to 1.3.1.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Meiyo Peng [Wed, 13 Mar 2019 15:37:12 +0000 (23:37 +0800)]

gnu: menu-cache: Update to 1.1.0.

* gnu/packages/lxde.scm (menu-cache): Update to 1.1.0.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

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Marius Bakke [Thu, 14 Mar 2019 13:31:29 +0000 (14:31 +0100)]

gnu: jasper: Update to 2.0.16.

* gnu/packages/image.scm (jasper): Update to 2.0.16.

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Marius Bakke [Thu, 14 Mar 2019 13:28:02 +0000 (14:28 +0100)]

gnu: rapidjson: Update home page.

* gnu/packages/web.scm (rapidjson)[source, home-page]: Follow redirected URL.

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Marius Bakke [Thu, 14 Mar 2019 13:19:13 +0000 (14:19 +0100)]

gnu: samba: Update to 4.9.5.

* gnu/packages/samba.scm (samba): Update to 4.9.5.

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Marius Bakke [Thu, 14 Mar 2019 13:17:33 +0000 (14:17 +0100)]

gnu: libzip: Update to 1.5.2.

* gnu/packages/compression.scm (libzip): Update to 1.5.2.

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Marius Bakke [Thu, 14 Mar 2019 13:16:52 +0000 (14:16 +0100)]

gnu: libzip: Don't use NAME in source URI.

* gnu/packages/compression.scm (libzip)[source](uri): Hard-code NAME.

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Marius Bakke [Wed, 13 Mar 2019 14:00:30 +0000 (15:00 +0100)]

gnu: WebKitGTK: Update to 2.24.0.

* gnu/packages/webkit.scm (webkitgtk-2.22): Rename to ...
(webkitgtk-2.24): ... this. Update to 2.24.0.
[inputs]: Add OPENJPEG.
* gnu/packages/gnome.scm (eolie, epiphany)[inputs]: Adjust accordingly.
* gnu/packages/web-browsers.scm (next-gtk-webkit)[inputs]: Likewise.

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Marius Bakke [Wed, 13 Mar 2019 13:03:57 +0000 (14:03 +0100)]

gnu: libsoup: Update to 2.66.0.

* gnu/packages/gnome.scm (libsoup): Update to 2.66.0.
[build-system]: Change to MESON-BUILD-SYSTEM.
[arguments]: Adjust accordingly.
[native-inputs]: Add GTK-DOC.
[inputs]: Add MIT-KRB5. Move SQLITE and LIBPSL ...
[propagated-inputs]: ... here.

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Marius Bakke [Sun, 10 Mar 2019 21:38:19 +0000 (22:38 +0100)]

gnu: Kodi: Add Wayland variant.

* gnu/packages/kodi.scm (kodi/wayland): New public variable.

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Marius Bakke [Sun, 10 Mar 2019 20:53:00 +0000 (21:53 +0100)]

gnu: Add waylandpp.

* gnu/packages/freedesktop.scm (waylandpp): New public variable.

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Brett Gilio [Wed, 20 Feb 2019 04:02:12 +0000 (22:02 -0600)]

gnu: Add emacs-lsp-ui.

* gnu/packages/emacs-xyz.scm (emacs-lsp-ui): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>

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Brett Gilio [Wed, 20 Feb 2019 04:02:29 +0000 (22:02 -0600)]

gnu: Add emacs-lsp-mode.

* gnu/packages/emacs-xyz.scm (emacs-lsp-mode): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>

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Brett Gilio [Wed, 20 Feb 2019 04:02:38 +0000 (22:02 -0600)]

gnu: emacs-dash: Update to 2.15.0.

* gnu/packages/emacs-xyz.scm (emacs-dash): Update to 2.15.0.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>

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Vagrant Cascadian [Wed, 13 Mar 2019 22:50:22 +0000 (15:50 -0700)]

gnu: Update dtc to 1.5.0.

* gnu/packages/bootloaders (dtc): Update to 1.5.0.
[native-inputs]: Add libyaml and pkg-config.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>

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Meiyo Peng [Thu, 14 Mar 2019 03:36:56 +0000 (11:36 +0800)]

gnu: fish: Update to 3.0.2.

* gnu/packages/shells.scm (fish): Update to 3.0.2.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>

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Nicolò Balzarotti [Thu, 14 Mar 2019 09:53:25 +0000 (10:53 +0100)]

gnu: Add r-rematch2.

* gnu/packages/cran.scm (r-rematch2): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>

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Leo Famulari [Thu, 14 Mar 2019 00:05:45 +0000 (20:05 -0400)]

gnu: w3m: Update to 0.5.3+git20190105.

* gnu/packages/w3m.scm (w3m): Update to 0.5.3+git20190105.

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Ludovic Courtès [Wed, 13 Mar 2019 22:10:19 +0000 (23:10 +0100)]

linux-container: 'containerized-operating-system' removes "useless" services.

Fixes <https://bugs.gnu.org/34211>.
Reported by Efraim Flashner <efraim@flashner.co.il>.

* gnu/system/linux-container.scm (containerized-operating-system)
[useless-services]: New variable.
Add 'services' field.

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Ludovic Courtès [Wed, 13 Mar 2019 20:57:14 +0000 (21:57 +0100)]

doc: Document the graphical installer some more.

* doc/guix.texi (Preparing for Installation): Rewrite to specify the two
installation modes.
(Guided Graphical Installation): New node.
(Manual Installation): New node, with the former sections.
(After System Installation): New node.
* doc/images/installer-network.png, doc/images/installer-partitions.png,
doc/images/installer-resume.png: New files.
* doc/local.mk (dist_infoimage_DATA): Add them.

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Ludovic Courtès [Wed, 13 Mar 2019 17:14:47 +0000 (18:14 +0100)]

installer: network: Adjust wording.

* gnu/installer/newt/network.scm (wait-service-online): Adjust wording
of the messages.

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Ludovic Courtès [Wed, 13 Mar 2019 16:11:19 +0000 (17:11 +0100)]

linux-modules: Factorize 'missing-modules'.

* gnu/build/linux-modules.scm (missing-modules): New procedure.
* gnu/system/mapped-devices.scm (check-device-initrd-modules): Use it.

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Ludovic Courtès [Wed, 13 Mar 2019 15:44:02 +0000 (16:44 +0100)]

Remove traces of "GuixSD".

* gnu/bootloader/extlinux.scm (extlinux-configuration-file): Remove
mentions of "GuixSD".
* gnu/bootloader/grub.scm (install-grub-efi): Likewise.
* gnu/build/vm.scm (make-iso9660-image): Change default #:volume-id to
"Guix_image".
(initialize-hard-disk): Search for the "Guix_image" label.
* gnu/ci.scm (system-test-jobs, tarball-jobs): Remove "GuixSD".
* gnu/installer/newt/welcome.scm (run-welcome-page): Likewise.
* gnu/packages/audio.scm (supercollider)[description]: Likewise.
* gnu/packages/curl.scm (curl): Likewise.
* gnu/packages/emacs.scm (emacs): Likewise.
* gnu/packages/gnome.scm (network-manager): Likewise.
* gnu/packages/julia.scm (julia): Likewise.
* gnu/packages/linux.scm (alsa-plugins): Likewise.
(powertop, wireless-regdb): Likewise.
* gnu/packages/package-management.scm (guix): Likewise.
* gnu/packages/polkit.scm (polkit): Likewise.
* gnu/packages/tex.scm (texlive-bin): Likewise.
* gnu/services/base.scm (file-systems->fstab): Likewise.
* gnu/services/cups.scm (%cups-activation): Likewise.
* gnu/services/mail.scm (%dovecot-activation): Likewise.
* gnu/services/messaging.scm (prosody-configuration)[log]: Likewise.
* gnu/system/examples/vm-image.tmpl (vm-image-motd): Likewise.
* gnu/system/install.scm (installation-os)[file-systems]: Change root
file system label to "Guix_image".
* gnu/system/mapped-devices.scm (check-device-initrd-modules):
Remove "GuixSD".
* gnu/system/vm.scm (system-docker-image): Likewise.
(system-disk-image)[root-label]: Change to "Guix_image".
* gnu/tests/install.scm (run-install): Remove "GuixSD".
* guix/modules.scm (guix-module-name?): Likewise.
* nix/libstore/optimise-store.cc: Likewise.

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Ludovic Courtès [Wed, 13 Mar 2019 15:24:36 +0000 (16:24 +0100)]

maint: Change Guix System file names from guixsd-*.

* Makefile.am (GUIXSD_SUPPORTED_SYSTEMS): Rename to...
(GUIX_SYSTEM_SUPPORTED_SYSTEMS): ... this.
(GUIXSD_VM_SYSTEMS): Rename to...
(GUIX_SYSTEM_VM_SYSTEMS): ... this.
(GUIXSD_IMAGE_BASE): Rename to...
(GUIX_SYSTEM_IMAGE_BASE): ... this. Change "guixsd-" to "guix-system-".
(GUIXSD_VM_IMAGE_BASE): Rename to...
(GUIX_SYSTEM_VM_IMAGE_BASE): ... this. Change "guixsd-" to
"guix-system-".
(release): Adjust accordingly.
* doc/guix.texi (USB Stick and DVD Installation)
(Installing Guix in a VM, Invoking guix system)
(Running Guix in a VM): Adjust file names accordingly.

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Ricardo Wurmus [Wed, 13 Mar 2019 21:48:10 +0000 (22:48 +0100)]

gnu: Add python-velocyto.

* gnu/packages/bioinformatics.scm (python-velocyto): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 21:43:43 +0000 (22:43 +0100)]

gnu: python-loompy: Update to 2.0.17.

* gnu/packages/bioinformatics.scm (python-loompy): Update to 2.0.17.
[source]: Fetch via git.
[arguments]: Enable tests, replace "check" phase.
[propagated-inputs]: Add python-pandas.
[native-inputs]: Add python-pytest.

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Oleg Pykhalov [Mon, 11 Mar 2019 17:47:02 +0000 (20:47 +0300)]

gnu: Add emacs-dockerfile-mode.

* gnu/packages/emacs-xyz.scm (emacs-dockerfile-mode): New variable.

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Oleg Pykhalov [Mon, 11 Mar 2019 17:44:35 +0000 (20:44 +0300)]

gnu: Add emacs-docker.

* gnu/packages/emacs-xyz.scm (emacs-docker): New variable.

commit | commitdiff | tree

Oleg Pykhalov [Mon, 11 Mar 2019 17:42:18 +0000 (20:42 +0300)]

gnu: Add emacs-docker-tramp.

* gnu/packages/emacs-xyz.scm (emacs-docker-tramp): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 19:44:25 +0000 (20:44 +0100)]

gnu: python-numba: Update to 0.42.0.

* gnu/packages/python-xyz.scm (python-numba): Update to 0.42.0.

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Ricardo Wurmus [Wed, 13 Mar 2019 19:43:55 +0000 (20:43 +0100)]

gnu: python-llvmlite: Update to 0.27.1.

* gnu/packages/llvm.scm (python-llvmlite): Update to 0.27.1.
[inputs]: Update patch for custom LLVM variant.

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Ricardo Wurmus [Wed, 13 Mar 2019 19:43:35 +0000 (20:43 +0100)]

gnu: Add python-on-guile.

* gnu/packages/guile-xyz.scm (python-on-guile): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 19:42:23 +0000 (20:42 +0100)]

gnu: guile-persist: Install go files to canonical directory.

* gnu/packages/guile-xyz.scm (guile-persist)[arguments]: Patch target
directory for go files in build phase "patch-prefix".

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Ricardo Wurmus [Wed, 13 Mar 2019 19:41:41 +0000 (20:41 +0100)]

gnu: guile-stis-parser: Install go files to canonical directory.

* gnu/packages/guile-xyz.scm (guile-stis-parser)[arguments]: Add build phase
"use-canonical-directory-for-go-files".

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Ricardo Wurmus [Wed, 13 Mar 2019 18:30:19 +0000 (19:30 +0100)]

gnu: Add kaldi.

* gnu/packages/machine-learning.scm (kaldi): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 16:19:58 +0000 (17:19 +0100)]

gnu: Add r-valr.

* gnu/packages/cran.scm (r-valr): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 16:13:21 +0000 (17:13 +0100)]

gnu: Add r-linnorm.

* gnu/packages/bioconductor.scm (r-linnorm): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 16:11:09 +0000 (17:11 +0100)]

gnu: Add python2-argparse.

* gnu/packages/python-xyz.scm (python2-argparse): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 16:10:53 +0000 (17:10 +0100)]

gnu: Add r-apcluster.

* gnu/packages/cran.scm (r-apcluster): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 16:10:41 +0000 (17:10 +0100)]

gnu: Add r-gmodels.

* gnu/packages/cran.scm (r-gmodels): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 14:14:10 +0000 (15:14 +0100)]

gnu: Add tetoolkit.

* gnu/packages/bioinformatics.scm (tetoolkit): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 13:26:45 +0000 (14:26 +0100)]

gnu: Add r-irkernel.

* gnu/packages/cran.scm (r-irkernel): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 13:26:34 +0000 (14:26 +0100)]

gnu: Add r-irdisplay.

* gnu/packages/cran.scm (r-irdisplay): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 13:26:25 +0000 (14:26 +0100)]

gnu: Add r-repr.

* gnu/packages/cran.scm (r-repr): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 13:26:08 +0000 (14:26 +0100)]

gnu: Add r-pbdzmq.

* gnu/packages/cran.scm (r-pbdzmq): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 12:49:20 +0000 (13:49 +0100)]

gnu: Add r-illuminahumanmethylationepicmanifest.

* gnu/packages/bioconductor.scm (r-illuminahumanmethylationepicmanifest):
New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 12:35:40 +0000 (13:35 +0100)]

gnu: Add r-lumi.

* gnu/packages/bioconductor.scm (r-lumi): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 12:35:33 +0000 (13:35 +0100)]

gnu: Add r-methylumi.

* gnu/packages/bioconductor.scm (r-methylumi): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 12:35:18 +0000 (13:35 +0100)]

gnu: Add r-fdb-infiniummethylation-hg19.

* gnu/packages/bioconductor.scm (r-fdb-infiniummethylation-hg19): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 12:19:06 +0000 (13:19 +0100)]

gnu: portaudio: Build position independent code and install more headers.

* gnu/packages/audio.scm (portaudio)[arguments]: Pass "--with-pic" and
initialize libtool in new build phase "build-only-position-independent-code";
install extra header in new build phase "install-missing-headers".

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Ricardo Wurmus [Wed, 13 Mar 2019 12:17:11 +0000 (13:17 +0100)]

gnu: Add r-minfi.

* gnu/packages/bioconductor.scm (r-minfi): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 12:16:48 +0000 (13:16 +0100)]

gnu: Add r-bumphunter.

* gnu/packages/bioconductor.scm (r-bumphunter): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 12:16:22 +0000 (13:16 +0100)]

gnu: Add r-siggenes.

* gnu/packages/bioconductor.scm (r-siggenes): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 12:15:42 +0000 (13:15 +0100)]

gnu: Add r-illuminaio.

* gnu/packages/bioconductor.scm (r-illuminaio): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 12:15:24 +0000 (13:15 +0100)]

gnu: Add r-geoquery.

* gnu/packages/bioconductor.scm (r-geoquery): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 12:14:40 +0000 (13:14 +0100)]

gnu: Add r-scone.

* gnu/packages/bioconductor.scm (r-scone): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 12:13:18 +0000 (13:13 +0100)]

gnu: Add r-scdd.

* gnu/packages/bioconductor.scm (r-scdd): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 12:04:11 +0000 (13:04 +0100)]

gnu: Add r-noiseq.

* gnu/packages/bioconductor.scm (r-noiseq): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 11:59:55 +0000 (12:59 +0100)]

gnu: Add r-monocle.

* gnu/packages/bioconductor.scm (r-monocle): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 11:53:03 +0000 (12:53 +0100)]

gnu: Add r-mast.

* gnu/packages/bioconductor.scm (r-mast): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 11:51:48 +0000 (12:51 +0100)]

gnu: Add r-icobra.

* gnu/packages/bioconductor.scm (r-icobra): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 11:43:35 +0000 (12:43 +0100)]

gnu: Add r-beanplot.

* gnu/packages/cran.scm (r-beanplot): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 11:43:20 +0000 (12:43 +0100)]

gnu: Add r-nor1mix.

* gnu/packages/cran.scm (r-nor1mix): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 11:40:14 +0000 (12:40 +0100)]

gnu: Add r-ggextra.

* gnu/packages/cran.scm (r-ggextra): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 11:39:39 +0000 (12:39 +0100)]

gnu: Add r-colourpicker.

* gnu/packages/cran.scm (r-colourpicker): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 11:11:14 +0000 (12:11 +0100)]

gnu: Add r-shinyjs.

* gnu/packages/cran.scm (r-shinyjs): New variable.

commit | commitdiff | tree

Ricardo Wurmus [Wed, 13 Mar 2019 11:06:36 +0000 (12:06 +0100)]

gnu: Add r-shinybs.

* gnu/packages/cran.scm (r-shinybs): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 10:18:27 +0000 (11:18 +0100)]

gnu: Add r-ihw.

* gnu/packages/bioconductor.scm (r-ihw): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 08:34:39 +0000 (09:34 +0100)]

gnu: Add r-lpsymphony.

* gnu/packages/bioconductor.scm (r-lpsymphony): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 08:09:00 +0000 (09:09 +0100)]

gnu: Add r-ebseq.

* gnu/packages/bioconductor.scm (r-ebseq): New variable.

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Ricardo Wurmus [Wed, 13 Mar 2019 08:08:22 +0000 (09:08 +0100)]

gnu: Add r-nbpseq.

* gnu/packages/bioconductor.scm (r-nbpseq): New variable.

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Nicolas Goaziou [Sun, 3 Mar 2019 00:33:44 +0000 (01:33 +0100)]

gnu: wireshark: Update to 3.0.0.

* gnu/packages/networking.scm (wireshark): Update to 3.0.0.

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Tomáš Čech [Sat, 9 Mar 2019 13:53:41 +0000 (14:53 +0100)]

gnu: python-py3status: Update to 3.16.

* gnu/packages/python-xyz.scm (python-py3status): Update to 3.16.

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Jack Hill [Wed, 13 Mar 2019 03:27:39 +0000 (23:27 -0400)]

gnu: r-minpack-lm: Fix typo in description.

* gnu/packages/cran.scm (r-minpack-lm)[description]: Fix typo.

Signed-off-by: Leo Famulari <leo@famulari.name>

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Nicolas Goaziou [Tue, 12 Mar 2019 22:57:40 +0000 (23:57 +0100)]

gnu: rosegarden: Update to 18.12.

* gnu/packages/music.scm (rosegarden): Update to 18.12.
[arguments]: Remove unused flag.

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Nicolas Goaziou [Tue, 12 Mar 2019 22:52:53 +0000 (23:52 +0100)]

gnu: musescore: Update to 3.0.5.

* gnu/packages/music.scm (musescore): Update to 3.0.5.

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Ludovic Courtès [Tue, 12 Mar 2019 22:29:47 +0000 (23:29 +0100)]

describe: 'package-path-entries' no longer includes the "guix" entry.

Fixes <https://bugs.gnu.org/34833>
Reported by mikadoZero <mikadozero@yandex.com>.

By returning the "guix" entry, we were then adding it to
%PACKAGE-MODULE-PATH, causing the discovery code to scan the whole tree,
including gnu/installer modules, which would in turn lead to warnings.
Regression introduced in bfc9c339301ffe6dd15d156894dc27e05f6f081f.

* guix/describe.scm (package-path-entries): Use
'current-channel-entries', not 'current-profile-entries'.

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Ludovic Courtès [Tue, 12 Mar 2019 16:07:04 +0000 (17:07 +0100)]

Revert "packages: 'package-input-rewriting' can take a promise."

This reverts commit 7d2be1277b44de9d0528d9d3015443b40cb3b104, which
turned out to be unhelpful for the problem at hand:

https://lists.gnu.org/archive/html/guix-devel/2019-01/msg00486.html

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Ricardo Wurmus [Tue, 12 Mar 2019 21:48:40 +0000 (22:48 +0100)]

gnu: guile-stis-parser: Override source file name.

* gnu/packages/guile-xyz.scm (guile-stis-parser)[source]: Provide file name
for git checkout.

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Ricardo Wurmus [Tue, 12 Mar 2019 21:46:51 +0000 (22:46 +0100)]

gnu: Add r-deds.

* gnu/packages/bioconductor.scm (r-deds): New variable.

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Ricardo Wurmus [Tue, 12 Mar 2019 21:27:29 +0000 (22:27 +0100)]

gnu: Add r-zim.

* gnu/packages/cran.scm (r-zim): New variable.

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Ricardo Wurmus [Tue, 12 Mar 2019 21:27:10 +0000 (22:27 +0100)]

gnu: Add r-penalized.

* gnu/packages/cran.scm (r-penalized): New variable.