zimoun [Fri, 30 Oct 2020 14:56:59 +0000 (15:56 +0100)]
gnu: r-fourcseq: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-fourcseq): Update to 1.24.0.
zimoun [Fri, 30 Oct 2020 14:56:56 +0000 (15:56 +0100)]
gnu: r-icens: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-icens): Update to 1.62.0.
zimoun [Fri, 30 Oct 2020 14:56:53 +0000 (15:56 +0100)]
gnu: r-m3c: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.12.0.
zimoun [Fri, 30 Oct 2020 14:56:50 +0000 (15:56 +0100)]
gnu: r-rgreat: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-rgreat): Update to 1.22.0.
zimoun [Fri, 30 Oct 2020 14:56:44 +0000 (15:56 +0100)]
gnu: r-biodist: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.62.0.
zimoun [Fri, 30 Oct 2020 14:56:41 +0000 (15:56 +0100)]
gnu: r-biocworkflowtools: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.16.0.
zimoun [Fri, 30 Oct 2020 14:56:38 +0000 (15:56 +0100)]
gnu: r-biocset: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.4.0.
[propagated-inputs]: Add r-s4vectors; remove r-rtracklayer.
zimoun [Thu, 3 Dec 2020 13:33:05 +0000 (14:33 +0100)]
gnu: Add r-biocio.
* gnu/packages/bioconductor.scm (r-biocio): New variable.
zimoun [Fri, 30 Oct 2020 14:56:35 +0000 (15:56 +0100)]
gnu: r-biocpkgtools: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.8.0.
zimoun [Fri, 30 Oct 2020 14:56:32 +0000 (15:56 +0100)]
gnu: r-biocor: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-biocor): Update to 1.14.0.
zimoun [Fri, 30 Oct 2020 14:56:29 +0000 (15:56 +0100)]
gnu: r-bioconcotk: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.10.0.
zimoun [Fri, 30 Oct 2020 14:56:26 +0000 (15:56 +0100)]
gnu: r-multiassayexperiment: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.16.0.
zimoun [Fri, 30 Oct 2020 14:56:23 +0000 (15:56 +0100)]
gnu: r-experimenthub: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 1.16.0.
zimoun [Fri, 30 Oct 2020 14:56:20 +0000 (15:56 +0100)]
gnu: r-biocgraph: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.52.0.
zimoun [Fri, 30 Oct 2020 14:56:16 +0000 (15:56 +0100)]
gnu: r-bioccasestudies: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-bioccasestudies): Update to 1.52.0.
zimoun [Fri, 30 Oct 2020 14:56:13 +0000 (15:56 +0100)]
gnu: r-ebarrays: Update to 2.54.0.
* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.54.0.
zimoun [Fri, 30 Oct 2020 14:56:10 +0000 (15:56 +0100)]
gnu: r-reactomepa: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.34.0.
zimoun [Fri, 30 Oct 2020 14:56:07 +0000 (15:56 +0100)]
gnu: r-graphite: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.36.0.
zimoun [Fri, 30 Oct 2020 14:56:04 +0000 (15:56 +0100)]
gnu: r-biobroom: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.22.0.
zimoun [Fri, 30 Oct 2020 14:56:01 +0000 (15:56 +0100)]
gnu: r-bioassayr: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.28.0.
zimoun [Fri, 30 Oct 2020 14:55:58 +0000 (15:55 +0100)]
gnu: r-chemminer: Update to 3.42.0.
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.42.0.
zimoun [Fri, 30 Oct 2020 14:55:55 +0000 (15:55 +0100)]
gnu: r-bigpint: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.6.0.
zimoun [Fri, 30 Oct 2020 14:55:52 +0000 (15:55 +0100)]
gnu: r-bigmemoryextras: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-bigmemoryextras): Update to 1.38.0.
zimoun [Fri, 30 Oct 2020 14:55:49 +0000 (15:55 +0100)]
gnu: r-biggr: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.26.0.
zimoun [Fri, 30 Oct 2020 14:55:46 +0000 (15:55 +0100)]
gnu: r-hyperdraw: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.42.0.
zimoun [Fri, 30 Oct 2020 14:55:43 +0000 (15:55 +0100)]
gnu: r-hypergraph: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.62.0.
zimoun [Fri, 30 Oct 2020 14:55:39 +0000 (15:55 +0100)]
gnu: r-rsbml: Update to 2.48.0.
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.48.0.
zimoun [Fri, 30 Oct 2020 14:55:36 +0000 (15:55 +0100)]
gnu: r-bifet: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.10.0.
zimoun [Fri, 30 Oct 2020 14:55:33 +0000 (15:55 +0100)]
gnu: r-bicare: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.48.0.
zimoun [Fri, 30 Oct 2020 14:55:30 +0000 (15:55 +0100)]
gnu: r-bhc: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-bhc): Update to 1.42.0.
zimoun [Fri, 30 Oct 2020 14:55:27 +0000 (15:55 +0100)]
gnu: r-bgx: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.56.0.
zimoun [Fri, 30 Oct 2020 14:55:24 +0000 (15:55 +0100)]
gnu: r-bgmix: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-bgmix): Update to 1.50.0.
zimoun [Fri, 30 Oct 2020 14:55:21 +0000 (15:55 +0100)]
gnu: r-unifiedwmwqpcr: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): Update to 1.26.0.
zimoun [Fri, 30 Oct 2020 14:55:18 +0000 (15:55 +0100)]
gnu: r-htqpcr: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-htqpcr): Update to 1.44.0.
zimoun [Fri, 30 Oct 2020 14:55:15 +0000 (15:55 +0100)]
gnu: r-variancepartition: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.20.0.
zimoun [Fri, 30 Oct 2020 14:55:12 +0000 (15:55 +0100)]
gnu: r-variantfiltering: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.26.0.
zimoun [Fri, 30 Oct 2020 14:55:09 +0000 (15:55 +0100)]
gnu: r-timeseriesexperiment: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): Update to 1.8.0.
zimoun [Fri, 30 Oct 2020 14:55:06 +0000 (15:55 +0100)]
gnu: r-wavcluster: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.24.0.
zimoun [Fri, 30 Oct 2020 14:55:03 +0000 (15:55 +0100)]
gnu: r-reqon: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.36.0.
zimoun [Fri, 30 Oct 2020 14:55:00 +0000 (15:55 +0100)]
gnu: r-seqbias: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-seqbias): Update to 1.38.0.
zimoun [Fri, 30 Oct 2020 14:54:53 +0000 (15:54 +0100)]
gnu: r-gdsfmt: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.26.0.
zimoun [Fri, 30 Oct 2020 14:54:47 +0000 (15:54 +0100)]
gnu: r-roc: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-roc): Update to 1.66.0.
zimoun [Fri, 30 Oct 2020 14:54:44 +0000 (15:54 +0100)]
gnu: r-genie3: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.12.0.
zimoun [Fri, 30 Oct 2020 14:54:41 +0000 (15:54 +0100)]
gnu: r-cicero: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.8.0.
zimoun [Fri, 30 Oct 2020 14:54:38 +0000 (15:54 +0100)]
gnu: r-rcistarget: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.10.0.
zimoun [Fri, 30 Oct 2020 14:54:35 +0000 (15:54 +0100)]
gnu: r-depecher: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.6.0.
zimoun [Fri, 30 Oct 2020 14:54:32 +0000 (15:54 +0100)]
gnu: r-mixomics: Update to 6.14.0.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.14.0.
zimoun [Fri, 30 Oct 2020 14:54:29 +0000 (15:54 +0100)]
gnu: r-flowsom: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-flowsom): Update to 1.22.0.
zimoun [Fri, 30 Oct 2020 14:54:26 +0000 (15:54 +0100)]
gnu: r-cytoml: Update to 2.2.1.
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.2.1.
zimoun [Fri, 30 Oct 2020 14:54:23 +0000 (15:54 +0100)]
gnu: r-opencyto: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.2.0.
zimoun [Fri, 30 Oct 2020 14:54:20 +0000 (15:54 +0100)]
gnu: r-flowstats: Update to 4.2.0.
* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.2.0.
zimoun [Fri, 30 Oct 2020 14:54:17 +0000 (15:54 +0100)]
gnu: r-flowworkspace: Update to 4.2.0.
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.2.0.
[inputs]: Add zlib.
[propagated-inputs]: Add r-aws-s3 and r-aws-signature. Remove r-stringr.
zimoun [Wed, 2 Dec 2020 15:25:30 +0000 (16:25 +0100)]
gnu: Add r-aws-s3.
* gnu/packages/cran.scm (r-aws-s3): New variable.
zimoun [Wed, 2 Dec 2020 15:21:59 +0000 (16:21 +0100)]
gnu: Add r-aws-signature.
* gnu/packages/cran.scm (r-aws-signature): New variable.
zimoun [Fri, 30 Oct 2020 14:54:14 +0000 (15:54 +0100)]
gnu: r-rprotobuflib: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.2.0.
zimoun [Fri, 30 Oct 2020 14:54:10 +0000 (15:54 +0100)]
gnu: r-flowclust: Update to 3.28.0.
* gnu/packages/bioconductor.scm (r-flowclust): Update to 3.28.0.
zimoun [Fri, 30 Oct 2020 14:54:07 +0000 (15:54 +0100)]
gnu: r-flowviz: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-flowviz): Update to 1.54.0.
zimoun [Fri, 30 Oct 2020 14:54:01 +0000 (15:54 +0100)]
gnu: r-ncdfflow: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-ncdfflow): Update to 2.36.0.
zimoun [Fri, 30 Oct 2020 14:53:58 +0000 (15:53 +0100)]
gnu: r-flowmeans: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-flowmeans): Update to 1.50.0.
zimoun [Fri, 30 Oct 2020 14:53:55 +0000 (15:53 +0100)]
gnu: r-flowcore: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.2.0.
[propagated-inputs]: Add r-s4vectors.
zimoun [Fri, 30 Oct 2020 14:53:52 +0000 (15:53 +0100)]
gnu: r-cytolib: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.2.0.
[native-inputs]: Add pkg-config.
zimoun [Fri, 30 Oct 2020 14:53:49 +0000 (15:53 +0100)]
gnu: r-consensusclusterplus: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-consensusclusterplus): Update to 1.54.0.
zimoun [Fri, 30 Oct 2020 14:53:46 +0000 (15:53 +0100)]
gnu: r-flowutils: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-flowutils): Update to 1.54.0.
zimoun [Fri, 30 Oct 2020 14:53:43 +0000 (15:53 +0100)]
gnu: r-rsubread: Update to 2.4.2.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.4.2.
zimoun [Fri, 30 Oct 2020 14:53:40 +0000 (15:53 +0100)]
gnu: r-annotatr: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.16.0.
zimoun [Fri, 30 Oct 2020 14:53:37 +0000 (15:53 +0100)]
gnu: r-biosigner: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.18.0.
zimoun [Fri, 30 Oct 2020 14:53:34 +0000 (15:53 +0100)]
gnu: r-ropls: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.22.0.
zimoun [Fri, 30 Oct 2020 14:53:31 +0000 (15:53 +0100)]
gnu: r-multidataset: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.18.0.
zimoun [Fri, 30 Oct 2020 14:53:28 +0000 (15:53 +0100)]
gnu: r-birewire: Update to 3.22.0.
* gnu/packages/bioconductor.scm (r-birewire): Update to 3.22.0.
zimoun [Fri, 30 Oct 2020 14:53:24 +0000 (15:53 +0100)]
gnu: r-rqc: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-rqc): Update to 1.24.0.
zimoun [Fri, 30 Oct 2020 14:53:21 +0000 (15:53 +0100)]
gnu: r-quasr: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-quasr): Update to 1.30.0.
zimoun [Fri, 30 Oct 2020 14:53:18 +0000 (15:53 +0100)]
gnu: r-rhisat2: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.6.0.
zimoun [Fri, 30 Oct 2020 14:53:15 +0000 (15:53 +0100)]
gnu: r-sgseq: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-sgseq): Update to 1.24.0.
zimoun [Fri, 30 Oct 2020 14:53:12 +0000 (15:53 +0100)]
gnu: r-rbowtie: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-rbowtie): Update to 1.30.0.
zimoun [Fri, 30 Oct 2020 14:53:09 +0000 (15:53 +0100)]
gnu: r-iclusterplus: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-iclusterplus): Update to 1.26.0.
zimoun [Fri, 30 Oct 2020 14:53:06 +0000 (15:53 +0100)]
gnu: r-biocfilecache: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-biocfilecache): Update to 1.14.0.
zimoun [Fri, 30 Oct 2020 14:53:03 +0000 (15:53 +0100)]
gnu: r-arrmnormalization: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-arrmnormalization): Update to 1.30.0.
zimoun [Fri, 30 Oct 2020 14:53:00 +0000 (15:53 +0100)]
gnu: r-progeny: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-progeny): Update to 1.12.0.
zimoun [Fri, 30 Oct 2020 14:52:57 +0000 (15:52 +0100)]
gnu: r-rbowtie2: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 1.12.0.
zimoun [Fri, 30 Oct 2020 14:52:53 +0000 (15:52 +0100)]
gnu: r-zfpkm: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-zfpkm): Update to 1.12.0.
zimoun [Fri, 30 Oct 2020 14:52:50 +0000 (15:52 +0100)]
gnu: r-webbioc: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-webbioc): Update to 1.62.0.
zimoun [Fri, 30 Oct 2020 14:52:47 +0000 (15:52 +0100)]
gnu: r-widgettools: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-widgettools): Update to 1.68.0.
zimoun [Fri, 30 Oct 2020 14:52:44 +0000 (15:52 +0100)]
gnu: r-wiggleplotr: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.14.0.
zimoun [Fri, 30 Oct 2020 14:52:41 +0000 (15:52 +0100)]
gnu: r-wrench: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-wrench): Update to 1.8.0.
zimoun [Fri, 30 Oct 2020 14:52:38 +0000 (15:52 +0100)]
gnu: r-xcms: Update to 3.12.0.
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.12.0.
[propagated-inputs]: Add r-mscoreutils.
zimoun [Thu, 3 Dec 2020 21:23:46 +0000 (22:23 +0100)]
gnu: Add r-mscoreutils.
* gnu/packages/bioconductor.scm (r-mscoreutils): New variable.
zimoun [Thu, 3 Dec 2020 01:54:46 +0000 (02:54 +0100)]
gnu: Update r-msnbase to 2.16.0.
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.16.0.
zimoun [Fri, 30 Oct 2020 14:52:35 +0000 (15:52 +0100)]
gnu: r-massspecwavelet: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.56.0.
zimoun [Fri, 30 Oct 2020 14:52:32 +0000 (15:52 +0100)]
gnu: r-xbseq: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-xbseq): Update to 1.22.0.
zimoun [Fri, 30 Oct 2020 14:52:29 +0000 (15:52 +0100)]
gnu: r-roar: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-roar): Update to 1.26.0.
zimoun [Fri, 30 Oct 2020 14:52:20 +0000 (15:52 +0100)]
gnu: r-yaqcaffy: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-yaqcaffy): Update to 1.50.0.
zimoun [Fri, 30 Oct 2020 14:52:17 +0000 (15:52 +0100)]
gnu: r-simpleaffy: Update to 2.66.0.
* gnu/packages/bioconductor.scm (r-simpleaffy): Update to 2.66.0.
zimoun [Fri, 30 Oct 2020 14:52:13 +0000 (15:52 +0100)]
gnu: r-gcrma: Update to 2.62.0.
* gnu/packages/bioconductor.scm (r-gcrma): Update to 2.62.0.
zimoun [Fri, 30 Oct 2020 14:52:07 +0000 (15:52 +0100)]
gnu: r-somaticsignatures: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-somaticsignatures): Update to 2.26.0.
zimoun [Fri, 30 Oct 2020 14:52:04 +0000 (15:52 +0100)]
gnu: r-gtrellis: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.22.0.
zimoun [Fri, 30 Oct 2020 14:52:01 +0000 (15:52 +0100)]
gnu: r-yamss: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-yamss): Update to 1.16.0.
zimoun [Fri, 30 Oct 2020 14:51:58 +0000 (15:51 +0100)]
gnu: r-ebimage: Update to 4.32.0.
* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.32.0.
zimoun [Fri, 30 Oct 2020 14:51:55 +0000 (15:51 +0100)]
gnu: r-aucell: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.12.0.
zimoun [Fri, 30 Oct 2020 14:51:52 +0000 (15:51 +0100)]
gnu: r-allelicimbalance: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-allelicimbalance): Update to 1.28.0.
zimoun [Fri, 30 Oct 2020 14:51:49 +0000 (15:51 +0100)]
gnu: r-annotationtools: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-annotationtools): Update to 1.64.0.
HCoop / jackhill / guix / guix.git / log