gnu: v4l-utils: Update to 1.12.3.

* gnu/packages/video.scm (v4l-utils): Update to 1.12.3.
[native-inputs]: Add perl.

gnu: video: Always use HTTPS on videolan.org.

* gnu/packages/video.scm (libdca, libdvdread, libdvdnav, libdvdnav-4)
(libdvdcss)[source]: Use HTTPS.
(libdca, libdvdcss, libbdplus, libaacs)[home-page]: Likewise.

gnu: freedink-data: Update to 1.08.20170401.

* gnu/packages/games.scm (freedink-data): Update to 1.08.20170401.

scripts: system: Rename --no-grub option to --no-bootloader.

* guix/scripts/system.scm (%options, show-help): Adjust accordingly.
Keep "--no-grub" for compatibility reasons, but do not mention it in the help.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

gnu: node: Actually set timeout to 1 h.

* gnu/packages/node.scm (node)[properties]: Actually set timeout to 1 h.

retroarch: Update to 1.5.0.

* gnu/packages/games.scm (retroarch): Update to 1.5.0.

gnu: node: Update to 7.8.0.

* gnu/packages/node.scm (node): Update to 7.8.0.
[properties]: Add timeout of 1 h.

gnu: yadifa: Update to 2.2.4.

* gnu/packages/dns.scm (yadifa): Update to 2.2.4.

gnu: perl-sys-cpu: Re-write description.

* gnu/packages/perl.scm (perl-sys-cpu)[description]: Fix some typos by
re-writing most of the description.

gnu: Fix typos in descriptions.

* gnu/packages/admin.scm (di)[description]: Likewise.
* gnu/packages/bioinformatics.scm (r-annotate)[description]: Likewise.
* gnu/packages/datastructures.scm (sparsehash)[description]: Likewise.
* gnu/packages/dns.scm (knot)[description]: Likewise.
* gnu/packages/emacs.scm (emacs-idle-highlight)[synopsis, description]:
Likewise.
* gnu/packages/gnome.scm (libpeas)[description]: Likewise.
* gnu/packages/gtk.scm (python2-pygtk)[description]: Likewise.
* gnu/packages/kde-frameworks.scm (kactivities)[description]: Fix typo.
* gnu/packages/libevent.scm (perl-anyevent)[description]: Likewise.
* gnu/packages/machine-learning.scm (ghmm)[description]: Likewise.
* gnu/packages/mail.scm (mlmmj)[description]: Likewise.
* gnu/packages/maths.scm (vc)[description]: Likewise.
* gnu/packages/music.scm (gx-super-fuzz-lv2)[description]: Likewise.
* gnu/packages/networking.scm (nload)[description]: Likewise.
* gnu/packages/python.scm (python-execnet)[description]: Likewise.
* gnu/packages/terminals.scm (tilda)[description]: Likewise.
* gnu/packages/python.scm (python-execnet, python-tables)
(python2-coverage-test-runner, python2-rope)[description]: Likewise.

gnu: fio: Update to 2.19.

* gnu/packages/benchmark.scm (fio): Update to 2.19.

gnu: nss: Increase test timeouts.

* gnu/packages/patches/nss-increase-test-timeout.patch: Wait up to 60s before
regarding a test as failed.

gnu: diffoscope: Update to 81.

* gnu/packages/package-management.scm (diffoscope): Update to 81.

lint: Avoid non-literal format strings.

Reported by Mathieu Othacehe <m.othacehe@gmail.com>
at <http://bugs.gnu.org/26498>.

* guix/scripts/lint.scm (warn-if-package-has-input): Rename to...
(package-input-intersection): ... this.  Remove 'linted' and 'message'
parameters.  Return a list of inputs.
(check-inputs-should-be-native): Adjust accordingly.
(check-inputs-should-not-be-an-input-at-all): Likewise.

gnu: Add emacs-calfw.

* gnu/packages/emacs.scm (emacs-calfw): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>

gnu: guile-xosd, guile-daemon: Switch to Guile 2.2.

* gnu/packages/guile.scm (guile-xosd)[inputs]: Replace GUILE-2.0 with
GUILE-2.2.
(guile-daemon)[inputs]: Likewise.

gnu: guile-daemon: Update to 0.1.2.

* gnu/packages/guile.scm (guile-daemon): Update to 0.1.2.

gnu: Add graphene.

* gnu/packages/gtk.scm (graphene): New variable.

gnu: bullet: Update to 2.86.1.

* gnu/packages/game-development.scm (bullet): Update to 2.86.1.

gnu: game-development: Use HTTPS where possible.

* gnu/packages/game-development.scm (sfml)[home-page]: Use HTTPS.
(physfs)[source, home-page]: Likewise.
(aseprite)[home-page]: Likewise.
(python-pygame)[home-page]: Likewise.

gnu: thefuck: Update to 3.16.

* gnu/packages/admin.scm (thefuck): Update to 3.16.

gnu: offlineimap: Update to 7.1.0.

* gnu/packages/mail.scm (offlineimap): Update to 7.1.0.

gnu: youtube-dl: Update to 2017.04.16.

* gnu/packages/video.scm (youtube-dl): Update to 2017.04.16.

gnu: vim: Update to 8.0.0566.

* gnu/packages/vim.scm (vim): Update to 8.0.0566.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>

tests: dicod: Bail out if we cannot connect within 20 seconds.

* gnu/tests/dict.scm (run-dicod-test)["connect inside"]: Bail out after
20 seconds of failure to connect.

services: Add a default value to various service types.

* gnu/services/admin.scm (rottlog-service-type)[default-value]: New
field.
* gnu/services/base.scm (guix-service-type)[default-value]: New field.
(guix-publish-service-type)[default-value]: New field.
* gnu/services/cups.scm (cups-service-type)[default-value]: New field.
* gnu/services/dict.scm (dicod-service-type)[default-value]: New field.
* gnu/services/mcron.scm (mcron-service-type)[default-value]: New field.
* gnu/services/networking.scm (<tor-configuration>)[config-file]: Add
default value.
(tor-service-type)[default-value]: New field.
(<bitlbee-configuration>)[interface, port, extra-settings]: Add default
values.
(bitlbee-service-type)[default-value]: New field.
(wpa-supplicant-service-type)[default-value]: New field.
(tlp-service-type)[default-value]: New field.
(openssh-service-type)[default-value]: New field.
* doc/guix.texi (Base Services, Log Rotation)
(Networking Services, Printing Services):
(Power management Services): Adjust examples accordingly.

services: Service types can now specify a default value for instances.

* gnu/services.scm (&no-default-value): New variable.
(<service-type>)[default-value]: New field.
(<service>): Rename constructor from 'service' to 'make-service'.
(service): New macro.
(%service-with-default-value): New procedure.
(&missing-value-service-error): New error condition.
* tests/services.scm ("services, default value"): New test.
* doc/guix.texi (Service Types and Services): Document 'default-value'.
(Service Reference): Explain default values.

ui: Gracefully report '&message' conditions.

* guix/ui.scm (report-load-error, warn-about-load-error)
(read/eval): Add special-case for SRFI-35 &message conditions.

services: 'service-parameters' becomes 'service-value'.

* gnu/services.scm (<service>)[parameters]: Rename to...
[value]: ... this.
Change calls to 'service-parameters' to 'service-value'.
* gnu/system.scm, gnu/tests/base.scm,
guix/scripts/system.scm, tests/services.scm: Likewise.
* doc/guix.texi (Service Reference): Adjust accordingly.

gnu: racket: Update to 6.8.

* gnu/packages/scheme.scm (racket): Update to 6.8.

system: Make grub use <menu-entry> instead of <boot-parameters> again.

* gnu/system/grub.scm: Remove boot-parameters->menu-entry.
(grub-configuration): Don't use boot-parameters->menu-entry.
* gnu/system.scm (operating-system-bootcfg): Use menu-entry.
* guix/scripts/system.scm (reinstall-grub): Use profile-grub-entries.
(perform-action): Use profile-grub-entries.

gnu: giac-xcas: Update to 1.2.3-37.

* gnu/packages/algebra.scm (giac-xcas): Update to 1.2.3-37.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>

gnu: asymptote: Update to 2.41

* gnu/packages/plotutils.scm (asymptote): Update to 2.41.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>

gnu: idris: Fix idris-default-arguments.

* gnu/packages/idris.scm (idris-default-arguments): Don't set IDRIS_LIBRARY_PATH before
building and change --install to --build.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>

gnu: idris: Update to 1.0.

* gnu/packages/idris.scm (idris): Update to 1.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>

gnu: speedtest-cli: Update to 1.0.3.

* gnu/packages/networking.scm (speedtest-cli): Update to 1.0.3.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>

scripts: system: Introduce profile-boot-parameters.

* guix/scripts/system.scm (profile-boot-parameters): New variable.
(reinstall-grub): Use profile-boot-parameters.
(perform-action): Use profile-boot-parameters.

Follow-up to 2e58e05bb68d4b747882cfa2b460b132d456f54a.

gnu: ceph: Disable failing test.

* gnu/packages/patches/ceph-disable-unittest-throttle.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/storage.scm (ceph)[source]: Use it.

gnu: rocksdb: Don't build static library.

* gnu/packages/databases.scm (rocksdb)[arguments]<#:phases>: Add new Makefile
substitution. Remove 'delete-static-library' phase. Adjust
'build-release-libraries' phase to match.
<#:make-flags>: Remove redundant flag.

gnu: rocksdb: Disable failing test.

* gnu/packages/databases.scm (rocksdb)[arguments]<#:phases>: Add one more
test to 'disable-failing-tests' phase.

gnu: bc: Update to 1.07.1.

* gnu/packages/algebra.scm (bc): Update to 1.07.1.
[native-inputs]: Add ED and TEXINFO.
[arguments]<#:phases>: Remove.

gnu: mupdf: Update to 1.11.

Also delete two stray patches that were added in
92ae98e2a0c2ffc807111dbf7616df47a9d3b31c and lost in a subsequent merge
(mupdf/fixed was already gone at e90e0fad1b3ba79d81f02424e143ee6f4f736e8b).

* gnu/packages/patches/mupdf-CVE-2017-5896.patch,
gnu/packages/patches/mupdf-CVE-2017-5991.patch,
gnu/packages/patches/mupdf-mujs-CVE-2016-10132.patch,
gnu/packages/patches/mupdf-mujs-CVE-2016-10133.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/patches/mupdf-build-with-openjpeg-2.1.patch: Adjust.
* gnu/packages/pdf.scm (mupdf): Update to 1.11.
[source]: Remove mujs patches. Adjust snippet to source rename.

gnu: xf86-video-intel: Update to 2.99.917-5-b57abe2.

* gnu/packages/xorg.scm (xf86-video-intel): Update to 2.99.917-5-b57abe2.

gnu: kodi: Update to 18.0_alpha-2-478d306.

* gnu/packages/kodi.scm (kodi): Update to 18.0_alpha-2-478d306.
[arguments]<#:configure-flags>: Remove obsolete flag.

system: Pass boot-parameters to (gnu system grub).

* gnu/system.scm (operating-system-bootcfg): Pass boot-parameters.
* gnu/system/grub.scm (boot-parameters->menu-entry): New variable.
(grub-configuration-file): Use boot-parameters->menu-entry.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

system: grub: Use (first all-entries) instead of (first entries).

* gnu/system/grub.scm (grub-configuration-file): Use (first all-entries)
instead of (first entries).

tests: Remove unused import (gnu system grub).

* gnu/tests/web.scm: Remove unused import.

scripts: system: Rename grub? and  install-grub? to bootloader? and install-bootloader?.

* guix/scripts/system.scm (perform-action): Rename grub? to bootloader,
(%options): rename install-grub? to install-bootloader?,
(%default-options): ditto,
(process-action): reindent and rename grub? to bootloader?.

system: Rename (internal) grub-device to fs->boot-device.

* gnu/system.scm (grub-device): Rename to...
(fs->boot-device): ... this.
(operating-system-grub.cfg): Adapt.
(operating-system-parameters-file): Adapt.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

vm: Reword grub.cfg to bootcfg.

* gnu/build/vm.scm (register-grub.cfg-root): Reword grub.cfg to bootcfg,
(initialize-hard-disk): ditto,
* gnu/system/vm.scm (system-disk-image): ditto,
(system-qemu-image): ditto,
(system-qemu-image/shared-store): ditto.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

system: Rename operating-system-grub.cfg to operating-system-bootcfg.

* gnu/system.scm (operating-system-grub.cfg): Rename to...
(operating-system-bootcfg): ... this.
* gnu/system/vm.scm (system-disk-image): Use operating-system-bootcfg.
(system-qemu-image): Use operating-system-bootcfg.
(system-qemu-image/shared-store): Use operating-system-bootcfg.
* guix/scripts/system.scm (perform-action): Use operating-system-bootcfg.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

scripts: system: Back out operating-system-bootcfg change.

Follow-up to 475e2ce211ac05a814c1f1bc2b9648baa17ad369.

* guix/scripts/system.scm (perform-action): Back out operating-system-bootcfg
change.

gnu: wireshark: Update to 2.2.6.

* gnu/packages/networking.scm (wireshark): Update to 2.2.6.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

scripts: system: Move save-load-path-excursion and save-environment-excursion macros to the top.

* guix/scripts/system.scm (save-load-path-excursion,
save-environment-excursion): Move definitions to the top of the file.
It allows to use them in the whole file.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

system: Rename kernel->grub-label to kernel->boot-label.

* gnu/system.scm (kernel->grub-label): Rename to kernel->boot-label.
(operating-system-grub.cfg): Adapt.
(operating-system-parameters-file): Ditto.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

scripts: system: Move save-load-path-excursion and save-environment-excursion macros to the top.

* guix/scripts/system.scm (save-load-path-excursion,
save-environment-excursion): Move definitions to the top of the file.
It allows to use them in the whole file.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>

gnu: Add orca.

* gnu/packages/gnome.scm (orca): New package.

gnu: Add python-pyatspi.

* gnu/packages/gnome.scm (python-pyatspi): New package.

gnu: speech-dispatcher: Add more inputs.

* gnu/packages/speech.scm (speech-dispatcher)[inputs]: Add espeak,
pulseaudio and python.

gnu: samba: Update to 4.5.8.

This fixes a regression introduced by the security fixes for CVE-2017-2619.

* gnu/packages/samba.scm (samba): Update to 4.5.8.

gnu: mutt: Update to 1.8.1.

* gnu/packages/mail.scm (mutt): Update to 1.8.1.
[source]: Use HTTPS URL.

gnu: gpgme: Update to 1.9.0.

* gnu/packages/gnupg.scm (gpgme): Update to 1.9.0.

gnu: ncmpc: Update to 0.27.

* gnu/packages/mpd.scm (ncmpc): Update to 0.27.

gnu: libmpdclient: Update to 2.11.

* gnu/packages/mpd.scm (libmpdclient): Update to 2.11.

gnu: mysql: Update to 5.7.18.

* gnu/packages/databases.scm (mysql): Update to 5.7.18.

gnu: youtube-dl: Update to 2017.04.14.

* gnu/packages/video.scm (youtube-dl): Update to 2017.04.14.

gnu: dub: Flesh out synopsis & description.

* gnu/packages/ldc.scm (dub)[synopsis, description]: Actually explain what
dub is and does.

build: Download aarch64 bootstrap binaries from alpha.gnu.org.

* build-aux/download.scm (file-name->uri): Remove flashner.co.il URL.
* gnu/packages/package-management.scm (boot-guile-uri): Likewise.

gnu: emacs-company: Enable tests.

* gnu/packages/emacs.scm (emacs-company)[arguments]: Add a 'check' phase.

build: Stop building gnu/build/svg.scm.

* Makefile.am (EXTRA_DIST): Add gnu/build/svg.scm.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove gnu/build/svg.scm.

It fixes the following build warnings:

gnu/build/svg.scm:36:12: warning: possibly unbound variable `cairo-create'
gnu/build/svg.scm:36:26: warning: possibly unbound variable `cairo-image-surface-create'
gnu/build/svg.scm:38:4: warning: possibly unbound variable `cairo-scale'
gnu/build/svg.scm:39:4: warning: possibly unbound variable `cairo-set-source-surface'

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

build-system/cargo: Remove store reference.

* guix/build/cargo-build-system.scm (generate-checksums): Remove store
  reference from comment. This comment was matching
  assert-no-store-file-names regexp in Makefile.am.
  Also, edit procedure docstring to precise that DIR-NAME is a store
  directory.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

build: Remove build-aux/hydra/demo-os.scm from EXTRA_DIST.

* Makefile.am (EXTRA_DIST): Remove build-aux/hydra/demo-os.scm. The
  file was removed of guix in this commit
  a3a27745013f3e5a287de3bf0187b2f72beb6965.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: Add guile-syntax-highlight.

* gnu/packages/guile.scm (guile-syntax-highlight): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>

gnu: julia: Update to 0.5.1.

* gnu/packages/julia.scm (julia): Update to 0.5.1.

gnu: Add emacs-cdlatex.

* gnu/packages/emacs.scm (emacs-cdlatex): New variable.

gnu: mafft: Update to 7.310.

* gnu/packages/bioinformatics.scm (mafft): Update to 7.310.

gnu: Add fillets-ng.

* gnu/packages/games.scm (fillets-ng): New variable.

gnu: Add teeworlds.

* gnu/packages/games.scm (teeworlds): New variable.
* gnu/packages/patches/teeworlds-use-latest-wavpack.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.

gnu: Add bam.

* gnu/packages/build-tools.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

gnu: password-store: Update to 1.7.1.

* gnu/packages/password-utils.scm (password-store): Update to 1.7.1.
[source]: Remove "password-store-gnupg-compat.patch".
* gnu/packages/patches/password-store-gnupg-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

gnu: php: Update to 7.1.4.

* gnu/packages/php.scm (php): Update to 7.1.4.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

gnu: postgresql: Update to 9.6.2.

* gnu/packages/databases.scm (postgresql): Update to 9.6.2.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

gnu: emacs-zenburn-theme: Update to 2.5.

* gnu/packages/emacs.scm (emacs-zenburn-theme): Update to 2.5.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

gnu: emacs-flycheck: Update to 30.

* gnu/packages/emacs.scm (emacs-flycheck): Update to 30.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

gnu: emacs-clojure-mode: Update to 5.4.0.

* gnu/packages/emacs.scm (emacs-clojure-mode): Update to 5.4.0.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

gnu: emacs-company: Update to 0.9.3.

* gnu/packages/emacs.scm (emacs-company): Update to 0.9.3.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

gnu: Add libxls.

* gnu/packages/xml.scm (libxls): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>

gnu: Add kiki.

* gnu/packages/games.scm (kiki): New variable.
* gnu/packages/patches/kiki-level-selection-crash.patch,
gnu/packages/patches/kiki-makefile.patch,
gnu/packages/patches/kiki-missing-includes.patch,
gnu/packages/patches/kiki-portability-64bit.patch: New patches.
* gnu/local.mk (dist_patch_DATA): Add them.

gnu: Add freeglut-2.8.

* gnu/packages/gl.scm (freeglut-2.8): New variable.

gnu: linux-libre: Update to 4.10.10.

* gnu/packages/linux.scm (%linux-libre-version): Update to 4.10.10.
(%linux-libre-hash): Update hash.

gnu: linux-libre@4.9: Update to 4.9.22.

* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.22.

gnu: linux-libre@4.4: Update to 4.4.61.

* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.61.

gnu: libsndfile: Update to 1.0.28 [fixes CVE-2017-{7585,7586,7741,7742}].

* gnu/packages/pulseaudio.scm (libsndfile)[replacement]: New field.
(libsndfile-1.0.28): New variable.

gnu: libsamplerate: Update to 0.1.9 [fixes CVE-2017-7697].

* gnu/packages/pulseaudio.scm (libsamplerate)[replacement]: New field.
(libsamplerate-0.1.9): New variable.

gnu: isc-dhcp: Update bundled bind to 9.9.9-P8 [security fixes].

Fixes CVE-2017-{3136,3137,3138}.

* gnu/packages/admin.scm (isc-dhcp): Update bundled bind to 9.9.9-P8.

gnu: icecat: Add more fixes from mozilla-esr45.

* gnu/packages/gnuzilla.scm (icecat)[source]: Add fixes from the upstream
mozilla-esr45 repository.

gnu: bind: Update to 9.10.4-P8 [fixes CVE-2017-{3136,3137,3138}].

* gnu/packages/dns.scm (bind): Update to 9.10.4-P8.

services: tor: Run in a container.

* gnu/services/networking.scm (tor-shepherd-service): Use (gnu build
shepherd) and use 'make-forkexec-constructor/container' instead of
'make-forkexec-constructor'.

file-systems: Allow for bind-mounts of named sockets.

Previously a named socket such as /dev/log would fail
the 'regular-file?' test and we'd end up mkdir'ing it.

* gnu/build/file-systems.scm (regular-file?): Remove.
(mount-file-system): Change (regular-file? source)
to (not (file-is-directory? source)).

services: Define '%linux-bare-metal-service' using 'simple-service'.

* gnu/services.scm (linux-bare-metal-service-type): Remove.
(%linux-bare-metal-service): Define in terms of 'simple-service'.