jackhill/guix/guix.git
4 years agognu: r-insight: Update to 0.4.1.
Ricardo Wurmus [Tue, 6 Aug 2019 12:44:15 +0000 (14:44 +0200)]
gnu: r-insight: Update to 0.4.1.

* gnu/packages/cran.scm (r-insight): Update to 0.4.1.

4 years agognu: r-abn: Update to 2.1.
Ricardo Wurmus [Tue, 6 Aug 2019 12:43:54 +0000 (14:43 +0200)]
gnu: r-abn: Update to 2.1.

* gnu/packages/cran.scm (r-abn): Update to 2.1.
[propagated-inputs]: Remove r-cairo.

4 years agognu: r-factominer: Update to 1.42.
Ricardo Wurmus [Tue, 6 Aug 2019 12:43:45 +0000 (14:43 +0200)]
gnu: r-factominer: Update to 1.42.

* gnu/packages/cran.scm (r-factominer): Update to 1.42.

4 years agognu: r-reticulate: Update to 1.13.
Ricardo Wurmus [Tue, 6 Aug 2019 12:43:39 +0000 (14:43 +0200)]
gnu: r-reticulate: Update to 1.13.

* gnu/packages/cran.scm (r-reticulate): Update to 1.13.

4 years agognu: r-dosnow: Update to 1.0.18.
Ricardo Wurmus [Tue, 6 Aug 2019 12:43:32 +0000 (14:43 +0200)]
gnu: r-dosnow: Update to 1.0.18.

* gnu/packages/cran.scm (r-dosnow): Update to 1.0.18.

4 years agognu: r-zip: Update to 2.0.3.
Ricardo Wurmus [Tue, 6 Aug 2019 12:43:24 +0000 (14:43 +0200)]
gnu: r-zip: Update to 2.0.3.

* gnu/packages/cran.scm (r-zip): Update to 2.0.3.

4 years agognu: r-radiant-data: Update to 1.0.0.
Ricardo Wurmus [Tue, 6 Aug 2019 12:43:18 +0000 (14:43 +0200)]
gnu: r-radiant-data: Update to 1.0.0.

* gnu/packages/cran.scm (r-radiant-data): Update to 1.0.0.

4 years agognu: r-shinyace: Update to 0.4.0.
Ricardo Wurmus [Tue, 6 Aug 2019 12:43:09 +0000 (14:43 +0200)]
gnu: r-shinyace: Update to 0.4.0.

* gnu/packages/cran.scm (r-shinyace): Update to 0.4.0.

4 years agognu: r-pillar: Update to 1.4.2.
Ricardo Wurmus [Tue, 6 Aug 2019 12:43:02 +0000 (14:43 +0200)]
gnu: r-pillar: Update to 1.4.2.

* gnu/packages/cran.scm (r-pillar): Update to 1.4.2.

4 years agognu: r-vctrs: Update to 0.2.0.
Ricardo Wurmus [Tue, 6 Aug 2019 12:42:49 +0000 (14:42 +0200)]
gnu: r-vctrs: Update to 0.2.0.

* gnu/packages/cran.scm (r-vctrs): Update to 0.2.0.
[propagated-inputs]: Add r-ellipsis.

4 years agognu: r-processx: Update to 3.4.1.
Ricardo Wurmus [Tue, 6 Aug 2019 12:42:43 +0000 (14:42 +0200)]
gnu: r-processx: Update to 3.4.1.

* gnu/packages/cran.scm (r-processx): Update to 3.4.1.

4 years agognu: r-vioplot: Update to 0.3.2.
Ricardo Wurmus [Tue, 6 Aug 2019 12:42:36 +0000 (14:42 +0200)]
gnu: r-vioplot: Update to 0.3.2.

* gnu/packages/cran.scm (r-vioplot): Update to 0.3.2.

4 years agognu: r-hardyweinberg: Update to 1.6.3.
Ricardo Wurmus [Tue, 6 Aug 2019 12:42:29 +0000 (14:42 +0200)]
gnu: r-hardyweinberg: Update to 1.6.3.

* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.6.3.

4 years agognu: r-mice: Update to 3.6.0.
Ricardo Wurmus [Tue, 6 Aug 2019 12:42:21 +0000 (14:42 +0200)]
gnu: r-mice: Update to 3.6.0.

* gnu/packages/cran.scm (r-mice): Update to 3.6.0.

4 years agognu: r-jomo: Update to 2.6-9.
Ricardo Wurmus [Tue, 6 Aug 2019 12:42:12 +0000 (14:42 +0200)]
gnu: r-jomo: Update to 2.6-9.

* gnu/packages/cran.scm (r-jomo): Update to 2.6-9.

4 years agognu: r-recipes: Update to 0.1.6.
Ricardo Wurmus [Tue, 6 Aug 2019 12:41:51 +0000 (14:41 +0200)]
gnu: r-recipes: Update to 0.1.6.

* gnu/packages/cran.scm (r-recipes): Update to 0.1.6.
[propagated-inputs]: Remove r-rcpproll.

4 years agognu: r-geometry: Update to 0.4.2.
Ricardo Wurmus [Tue, 6 Aug 2019 12:41:32 +0000 (14:41 +0200)]
gnu: r-geometry: Update to 0.4.2.

* gnu/packages/cran.scm (r-geometry): Update to 0.4.2.
[propagated-inputs]: Add r-linprog.

4 years agognu: Add r-linprog.
Ricardo Wurmus [Tue, 6 Aug 2019 12:41:25 +0000 (14:41 +0200)]
gnu: Add r-linprog.

* gnu/packages/cran.scm (r-linprog): New variable.

4 years agognu: r-lava: Update to 1.6.6.
Ricardo Wurmus [Tue, 6 Aug 2019 12:41:17 +0000 (14:41 +0200)]
gnu: r-lava: Update to 1.6.6.

* gnu/packages/cran.scm (r-lava): Update to 1.6.6.

4 years agognu: r-energy: Update to 1.7-6.
Ricardo Wurmus [Tue, 6 Aug 2019 12:41:08 +0000 (14:41 +0200)]
gnu: r-energy: Update to 1.7-6.

* gnu/packages/cran.scm (r-energy): Update to 1.7-6.

4 years agognu: r-lpsolve: Update to 5.6.13.2.
Ricardo Wurmus [Tue, 6 Aug 2019 12:41:01 +0000 (14:41 +0200)]
gnu: r-lpsolve: Update to 5.6.13.2.

* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.13.2.

4 years agognu: r-rcpp: Update to 1.0.2.
Ricardo Wurmus [Tue, 6 Aug 2019 12:40:52 +0000 (14:40 +0200)]
gnu: r-rcpp: Update to 1.0.2.

* gnu/packages/cran.scm (r-rcpp): Update to 1.0.2.

4 years agognu: r-pkgbuild: Update to 1.0.4.
Ricardo Wurmus [Tue, 6 Aug 2019 12:40:44 +0000 (14:40 +0200)]
gnu: r-pkgbuild: Update to 1.0.4.

* gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.4.

4 years agognu: r-haven: Update to 2.1.1.
Ricardo Wurmus [Tue, 6 Aug 2019 12:40:36 +0000 (14:40 +0200)]
gnu: r-haven: Update to 2.1.1.

* gnu/packages/cran.scm (r-haven): Update to 2.1.1.

4 years agognu: r-curl: Update to 4.0.
Ricardo Wurmus [Tue, 6 Aug 2019 12:40:28 +0000 (14:40 +0200)]
gnu: r-curl: Update to 4.0.

* gnu/packages/cran.scm (r-curl): Update to 4.0.

4 years agognu: r-callr: Update to 3.3.1.
Ricardo Wurmus [Tue, 6 Aug 2019 12:40:21 +0000 (14:40 +0200)]
gnu: r-callr: Update to 3.3.1.

* gnu/packages/cran.scm (r-callr): Update to 3.3.1.

4 years agognu: r-ellipsis: Update to 0.2.0.1.
Ricardo Wurmus [Tue, 6 Aug 2019 12:40:13 +0000 (14:40 +0200)]
gnu: r-ellipsis: Update to 0.2.0.1.

* gnu/packages/cran.scm (r-ellipsis): Update to 0.2.0.1.

4 years agognu: r-clipr: Update to 0.7.0.
Ricardo Wurmus [Tue, 6 Aug 2019 12:40:02 +0000 (14:40 +0200)]
gnu: r-clipr: Update to 0.7.0.

* gnu/packages/cran.scm (r-clipr): Update to 0.7.0.

4 years agognu: r-desolve: Update to 1.24.
Ricardo Wurmus [Tue, 6 Aug 2019 12:09:23 +0000 (14:09 +0200)]
gnu: r-desolve: Update to 1.24.

* gnu/packages/maths.scm (r-desolve): Update to 1.24.

4 years agognu: r-quantreg: Update to 5.42.1.
Ricardo Wurmus [Tue, 6 Aug 2019 11:51:34 +0000 (13:51 +0200)]
gnu: r-quantreg: Update to 5.42.1.

* gnu/packages/statistics.scm (r-quantreg): Update to 5.42.1.

4 years agognu: r-pbapply: Update to 1.4-1.
Ricardo Wurmus [Tue, 6 Aug 2019 11:51:30 +0000 (13:51 +0200)]
gnu: r-pbapply: Update to 1.4-1.

* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-1.

4 years agognu: r-robust: Update to 0.4-18.1.
Ricardo Wurmus [Tue, 6 Aug 2019 11:51:25 +0000 (13:51 +0200)]
gnu: r-robust: Update to 0.4-18.1.

* gnu/packages/statistics.scm (r-robust): Update to 0.4-18.1.

4 years agognu: r-mclust: Update to 5.4.5.
Ricardo Wurmus [Tue, 6 Aug 2019 11:51:20 +0000 (13:51 +0200)]
gnu: r-mclust: Update to 5.4.5.

* gnu/packages/statistics.scm (r-mclust): Update to 5.4.5.

4 years agognu: r-fastica: Update to 1.2-2.
Ricardo Wurmus [Tue, 6 Aug 2019 11:51:12 +0000 (13:51 +0200)]
gnu: r-fastica: Update to 1.2-2.

* gnu/packages/statistics.scm (r-fastica): Update to 1.2-2.

4 years agognu: r-cowplot: Update to 1.0.0.
Ricardo Wurmus [Tue, 6 Aug 2019 11:50:53 +0000 (13:50 +0200)]
gnu: r-cowplot: Update to 1.0.0.

* gnu/packages/statistics.scm (r-cowplot): Update to 1.0.0.
[propagated-inputs]: Remove r-plyr; add r-rlang.

4 years agognu: r-rngtools: Update to 1.4.
Ricardo Wurmus [Tue, 6 Aug 2019 11:50:47 +0000 (13:50 +0200)]
gnu: r-rngtools: Update to 1.4.

* gnu/packages/statistics.scm (r-rngtools): Update to 1.4.

4 years agognu: r-domc: Update to 1.3.6.
Ricardo Wurmus [Tue, 6 Aug 2019 11:50:42 +0000 (13:50 +0200)]
gnu: r-domc: Update to 1.3.6.

* gnu/packages/statistics.scm (r-domc): Update to 1.3.6.

4 years agognu: r-doparallel: Update to 1.0.15.
Ricardo Wurmus [Tue, 6 Aug 2019 11:50:37 +0000 (13:50 +0200)]
gnu: r-doparallel: Update to 1.0.15.

* gnu/packages/statistics.scm (r-doparallel): Update to 1.0.15.

4 years agognu: r-foreach: Update to 1.4.7.
Ricardo Wurmus [Tue, 6 Aug 2019 11:50:29 +0000 (13:50 +0200)]
gnu: r-foreach: Update to 1.4.7.

* gnu/packages/statistics.scm (r-foreach): Update to 1.4.7.

4 years agognu: r-iterators: Update to 1.0.12.
Ricardo Wurmus [Tue, 6 Aug 2019 11:50:22 +0000 (13:50 +0200)]
gnu: r-iterators: Update to 1.0.12.

* gnu/packages/statistics.scm (r-iterators): Update to 1.0.12.

4 years agognu: r-rsqlite: Update to 2.1.2.
Ricardo Wurmus [Tue, 6 Aug 2019 11:50:15 +0000 (13:50 +0200)]
gnu: r-rsqlite: Update to 2.1.2.

* gnu/packages/statistics.scm (r-rsqlite): Update to 2.1.2.

4 years agognu: r-blob: Update to 1.2.0.
Ricardo Wurmus [Tue, 6 Aug 2019 11:49:37 +0000 (13:49 +0200)]
gnu: r-blob: Update to 1.2.0.

* gnu/packages/statistics.scm (r-blob): Update to 1.2.0.
[propagated-inputs]: Add r-rlang and r-vctrs; remove r-tibble.

4 years agognu: r-rmarkdown: Update to 1.14.
Ricardo Wurmus [Tue, 6 Aug 2019 11:49:28 +0000 (13:49 +0200)]
gnu: r-rmarkdown: Update to 1.14.

* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.14.

4 years agognu: r-rcpparmadillo: Update to 0.9.600.4.0.
Ricardo Wurmus [Tue, 6 Aug 2019 11:49:21 +0000 (13:49 +0200)]
gnu: r-rcpparmadillo: Update to 0.9.600.4.0.

* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.600.4.0.

4 years agognu: r-hms: Update to 0.5.0.
Ricardo Wurmus [Tue, 6 Aug 2019 11:48:53 +0000 (13:48 +0200)]
gnu: r-hms: Update to 0.5.0.

* gnu/packages/statistics.scm (r-hms): Update to 0.5.0.
[propagated-inputs]: Add r-vctrs.

4 years agognu: r-devtools: Update to 2.1.0.
Ricardo Wurmus [Tue, 6 Aug 2019 11:48:26 +0000 (13:48 +0200)]
gnu: r-devtools: Update to 2.1.0.

* gnu/packages/statistics.scm (r-devtools): Update to 2.1.0.
[propagated-inputs]: Add r-roxygen2 and r-testthat.

4 years agognu: r-git2r: Update to 0.26.1.
Ricardo Wurmus [Tue, 6 Aug 2019 11:48:04 +0000 (13:48 +0200)]
gnu: r-git2r: Update to 0.26.1.

* gnu/packages/statistics.scm (r-git2r): Update to 0.26.1.
[inputs]: Remove libssh2 and openssl; add libgit2.

4 years agognu: r-httr: Update to 1.4.1.
Ricardo Wurmus [Tue, 6 Aug 2019 11:47:54 +0000 (13:47 +0200)]
gnu: r-httr: Update to 1.4.1.

* gnu/packages/statistics.scm (r-httr): Update to 1.4.1.

4 years agognu: r-openssl: Update to 1.4.1.
Ricardo Wurmus [Tue, 6 Aug 2019 11:47:48 +0000 (13:47 +0200)]
gnu: r-openssl: Update to 1.4.1.

* gnu/packages/statistics.scm (r-openssl): Update to 1.4.1.

4 years agognu: r-checkmate: Update to 1.9.4.
Ricardo Wurmus [Tue, 6 Aug 2019 11:47:41 +0000 (13:47 +0200)]
gnu: r-checkmate: Update to 1.9.4.

* gnu/packages/statistics.scm (r-checkmate): Update to 1.9.4.

4 years agognu: r-xml2: Update to 1.2.1.
Ricardo Wurmus [Tue, 6 Aug 2019 11:47:34 +0000 (13:47 +0200)]
gnu: r-xml2: Update to 1.2.1.

* gnu/packages/statistics.scm (r-xml2): Update to 1.2.1.

4 years agognu: r-coda: Update to 0.19-3.
Ricardo Wurmus [Tue, 6 Aug 2019 11:47:26 +0000 (13:47 +0200)]
gnu: r-coda: Update to 0.19-3.

* gnu/packages/statistics.scm (r-coda): Update to 0.19-3.

4 years agognu: r-dplyr: Update to 0.8.3.
Ricardo Wurmus [Tue, 6 Aug 2019 11:47:19 +0000 (13:47 +0200)]
gnu: r-dplyr: Update to 0.8.3.

* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.3.

4 years agognu: r-testthat: Update to 2.2.1.
Ricardo Wurmus [Tue, 6 Aug 2019 11:47:04 +0000 (13:47 +0200)]
gnu: r-testthat: Update to 2.2.1.

* gnu/packages/statistics.scm (r-testthat): Update to 2.2.1.
[propagated-inputs]: Add r-evaluate.

4 years agognu: r-digest: Update to 0.6.20.
Ricardo Wurmus [Tue, 6 Aug 2019 11:46:55 +0000 (13:46 +0200)]
gnu: r-digest: Update to 0.6.20.

* gnu/packages/statistics.scm (r-digest): Update to 0.6.20.

4 years agognu: r-nlme: Update to 3.1-141.
Ricardo Wurmus [Tue, 6 Aug 2019 11:46:46 +0000 (13:46 +0200)]
gnu: r-nlme: Update to 3.1-141.

* gnu/packages/statistics.scm (r-nlme): Update to 3.1-141.

4 years agognu: r-foreign: Update to 0.8-72.
Ricardo Wurmus [Tue, 6 Aug 2019 11:46:34 +0000 (13:46 +0200)]
gnu: r-foreign: Update to 0.8-72.

* gnu/packages/statistics.scm (r-foreign): Update to 0.8-72.

4 years agognu: r-boot: Update to 1.3-23.
Ricardo Wurmus [Tue, 6 Aug 2019 10:34:51 +0000 (12:34 +0200)]
gnu: r-boot: Update to 1.3-23.

* gnu/packages/statistics.scm (r-boot): Update to 1.3-23.

4 years agognu: faudio: Update to 19.08.
Rutger Helling [Tue, 6 Aug 2019 11:08:22 +0000 (13:08 +0200)]
gnu: faudio: Update to 19.08.

* gnu/packages/audio.scm (faudio): Update to 19.08.

4 years agognu: kitty: Update to 0.14.3.
Rutger Helling [Tue, 6 Aug 2019 11:04:47 +0000 (13:04 +0200)]
gnu: kitty: Update to 0.14.3.

* gnu/packages/terminals.scm (kitty): Update to 0.14.3.
[inputs]: Add libcanberra.

4 years agognu: emacs-ivy: Update to 0.12.0-1.d3e4514.
Brian Leung [Mon, 5 Aug 2019 21:05:43 +0000 (23:05 +0200)]
gnu: emacs-ivy: Update to 0.12.0-1.d3e4514.

* gnu/packages/emacs-xyz.scm (emacs-ivy): Update to 0.12.0-1.d3e4514.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: libmad: Add more security fixes from Debian.
Mark H Weaver [Tue, 6 Aug 2019 07:12:56 +0000 (03:12 -0400)]
gnu: libmad: Add more security fixes from Debian.

Includes fixes for CVE-2017-8372, CVE-2017-8373, and CVE-2017-8374.

Reported by <marit@secmail.pro> in <https://bugs.gnu.org/36909>.

* gnu/packages/patches/libmad-frame-length.patch: Delete file.
* gnu/packages/patches/libmad-length-check.patch,
gnu/packages/patches/libmad-md_size.patch: New files.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/mp3.scm (libmad)[source]: Update patches accordingly.

4 years agognu: flatpak: Update to 1.4.2.
Rutger Helling [Tue, 6 Aug 2019 06:24:23 +0000 (08:24 +0200)]
gnu: flatpak: Update to 1.4.2.

* gnu/packages/package-management.scm (flatpak): Update to 1.4.2.

4 years agognu: strace: Fix test failures on some systems.
Marius Bakke [Mon, 5 Aug 2019 17:36:59 +0000 (19:36 +0200)]
gnu: strace: Fix test failures on some systems.

* gnu/packages/patches/strace-ipc-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/linux.scm (strace)[source](patches): New field.
[arguments]: Add 'regenerate-tests' phase.

Co-Authored-By: Mark H Weaver <mhw@netris.org>
4 years agognu: terminator: Wrap instead of propagating GSettings schemas.
Tobias Geerinckx-Rice [Mon, 5 Aug 2019 20:16:54 +0000 (22:16 +0200)]
gnu: terminator: Wrap instead of propagating GSettings schemas.

* gnu/packages/gnome.scm (terminator)[inputs]:
Move gsettings-desktop-schemas back here…
[propagated-inputs]: …from here.
[arguments]: Add the glib-or-gtk-build-system's ‘glib-or-gtk-wrap’
phase.

4 years agognu: libvirt: Update to 5.6.0.
Tobias Geerinckx-Rice [Mon, 5 Aug 2019 18:59:32 +0000 (20:59 +0200)]
gnu: libvirt: Update to 5.6.0.

* gnu/packages/virtualization.scm (libvirt): Update to 5.6.0.
[source]: Remove patch.
* gnu/packages/patches/libvirt-remove-ATTRIBUTE_UNUSED.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

4 years agognu: python-libvirt: Update to 5.6.0.
Tobias Geerinckx-Rice [Mon, 5 Aug 2019 18:54:51 +0000 (20:54 +0200)]
gnu: python-libvirt: Update to 5.6.0.

* gnu/packages/virtualization.scm (python-libvirt): Update to 5.6.0.

4 years agoRevert "gnu: nss: Update to 3.45 [security fixes]."
Mark H Weaver [Mon, 5 Aug 2019 16:45:22 +0000 (12:45 -0400)]
Revert "gnu: nss: Update to 3.45 [security fixes]."

This reverts commit 95580bda050d0e776c0730b95b4fd3b84fb4f1c7.

Note that the security fixes mentioned in that commit were already
present in NSS 3.44.1, which is the version that's now reinstated
by this revert.  The rationale for this revert is that NSS 3.45 fails
to build on armhf-linux.

4 years agognu: emacs-org-super-agenda: Update to 1.1.1-1.375bde4.
Brian Leung [Sat, 3 Aug 2019 18:15:22 +0000 (20:15 +0200)]
gnu: emacs-org-super-agenda: Update to 1.1.1-1.375bde4.

* gnu/packages/emacs-xyz.scm (emacs-org-super-agenda): Update to
1.1.1-1.375bde4.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: Add emacs-org-sidebar.
Brian Leung [Fri, 2 Aug 2019 04:43:00 +0000 (06:43 +0200)]
gnu: Add emacs-org-sidebar.

* gnu/packages/emacs-xyz.scm (emacs-org-sidebar): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: emacs-dired-hacks: Update to 0.0.1-2.886befe.
Brian Leung [Fri, 2 Aug 2019 04:30:30 +0000 (06:30 +0200)]
gnu: emacs-dired-hacks: Update to 0.0.1-2.886befe.

* gnu/packages/emacs-xyz.scm (emacs-dired-hacks): Update to 0.0.1-2.886befe.
[description]: Use full sentences.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: Add emacs-nswbuff.
Brian Leung [Thu, 1 Aug 2019 15:59:38 +0000 (17:59 +0200)]
gnu: Add emacs-nswbuff.

* gnu/packages/emacs-xyz.scm (emacs-nswbuff): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: Add emacs-company-math.
Brian Leung [Tue, 30 Jul 2019 08:59:10 +0000 (10:59 +0200)]
gnu: Add emacs-company-math.

* gnu/packages/emacs-xyz.scm (emacs-company-math): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: Add emacs-math-symbol-lists.
Brian Leung [Tue, 30 Jul 2019 08:58:59 +0000 (10:58 +0200)]
gnu: Add emacs-math-symbol-lists.

* gnu/packages/emacs-xyz.scm (emacs-math-symbol-lists): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: Add emacs-hercules.
Brian Leung [Tue, 30 Jul 2019 08:50:36 +0000 (10:50 +0200)]
gnu: Add emacs-hercules.

* gnu/packages/emacs-xyz.scm (emacs-hercules): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: Add emacs-mc-extras.
Brian Leung [Tue, 30 Jul 2019 08:49:20 +0000 (10:49 +0200)]
gnu: Add emacs-mc-extras.

* gnu/packages/emacs-xyz.scm (emacs-mc-extras): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: emacs-nodejs-repl: Update to 0.2.2.
Brian Leung [Tue, 30 Jul 2019 03:10:02 +0000 (05:10 +0200)]
gnu: emacs-nodejs-repl: Update to 0.2.2.

* gnu/packages/emacs-xyz.scm (emacs-nodejs-repl): Update to 0.2.2.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: emacs-counsel-etags: Update to 1.8.7.
Brian Leung [Tue, 30 Jul 2019 03:08:16 +0000 (05:08 +0200)]
gnu: emacs-counsel-etags: Update to 1.8.7.

* gnu/packages/emacs-xyz.scm (emacs-counsel-etags): Update to 1.8.7.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: emacs-lua-mode: Update to 20151025-2.95c64bb.
Brian Leung [Sat, 27 Jul 2019 03:16:30 +0000 (05:16 +0200)]
gnu: emacs-lua-mode: Update to 20151025-2.95c64bb.

* gnu/packages/emacs-xyz.scm (emacs-lua-mode): Update to 20151025-2.95c64bb.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: emacs-evil-expat: Update to 0.0.1-1.f4fcd0a.
Brian Leung [Sat, 27 Jul 2019 03:00:46 +0000 (05:00 +0200)]
gnu: emacs-evil-expat: Update to 0.0.1-1.f4fcd0a.

* gnu/packages/emacs-xyz.scm (emacs-evil-expat): Update to 0.0.1-1.f4fcd0a.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: emacs-so-long: Update to 1.0-2.cfae473.
Brian Leung [Sat, 27 Jul 2019 02:14:24 +0000 (04:14 +0200)]
gnu: emacs-so-long: Update to 1.0-2.cfae473.

* gnu/packages/emacs-xyz.scm (emacs-so-long): Update to 1.0-2.cfae473.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: emacs-highlight-indentation: Update to 0.7.0-1.d03803f.
Brian Leung [Fri, 26 Jul 2019 23:49:54 +0000 (01:49 +0200)]
gnu: emacs-highlight-indentation: Update to 0.7.0-1.d03803f.

* gnu/packages/emacs-xyz.scm (emacs-highlight-indentation): Update to
0.7.0-1.d03803f.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: Add emacs-dired-toggle-sudo.
Brian Leung [Fri, 26 Jul 2019 23:00:50 +0000 (01:00 +0200)]
gnu: Add emacs-dired-toggle-sudo.

* gnu/packages/emacs-xyz.scm (emacs-dired-toggle-sudo): New variable.
* gnu/packages/patches/emacs-dired-toggle-sudo-emacs-26.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: Add emacs-helm-org-rifle.
Brian Leung [Wed, 24 Jul 2019 22:03:59 +0000 (00:03 +0200)]
gnu: Add emacs-helm-org-rifle.

* gnu/packages/emacs-xyz.scm (emacs-helm-org-rifle): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: emacs-magit-todos: Update to 1.3.
Brian Leung [Wed, 24 Jul 2019 03:54:14 +0000 (05:54 +0200)]
gnu: emacs-magit-todos: Update to 1.3.

* gnu/packages/emacs-xyz.scm (emacs-magit-todos): Update to 1.3.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: Add emacs-scroll-on-drag.
Brian Leung [Wed, 24 Jul 2019 02:29:55 +0000 (04:29 +0200)]
gnu: Add emacs-scroll-on-drag.

* gnu/packages/emacs-xyz.scm (emacs-scroll-on-drag): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: Add emacs-evil-traces.
Brian Leung [Wed, 24 Jul 2019 02:05:29 +0000 (04:05 +0200)]
gnu: Add emacs-evil-traces.

* gnu/packages/emacs-xyz.scm (emacs-evil-traces): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: emacs-helm: Update to 3.3.
Brian Leung [Wed, 24 Jul 2019 02:05:18 +0000 (04:05 +0200)]
gnu: emacs-helm: Update to 3.3.

* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.3.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: Add libhandy.
Jonathan Frederickson [Mon, 5 Aug 2019 00:13:00 +0000 (20:13 -0400)]
gnu: Add libhandy.

* gnu/packages/gnome.scm (libhandy): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: emacs-org-contrib: Update to 20190805.
Nicolas Goaziou [Mon, 5 Aug 2019 11:07:56 +0000 (13:07 +0200)]
gnu: emacs-org-contrib: Update to 20190805.

* gnu/packages/emacs-xyz.scm (emacs-org-contrib): Update to 20190805.

4 years agognu: emacs-org: Update to 9.2.5.
Nicolas Goaziou [Mon, 5 Aug 2019 11:03:17 +0000 (13:03 +0200)]
gnu: emacs-org: Update to 9.2.5.

* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.2.5.

4 years agognu: python-scikit-learn: Make gzip timestamps writable.
Brian Leung [Tue, 25 Jun 2019 18:50:54 +0000 (20:50 +0200)]
gnu: python-scikit-learn: Make gzip timestamps writable.

* gnu/packages/machine-learning.scm (python-scikit-learn)
[arguments]: Add custom phase to make gzip timestamps writable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: khmer: Make gzip timestamps writable.
Brian Leung [Tue, 25 Jun 2019 18:48:54 +0000 (20:48 +0200)]
gnu: khmer: Make gzip timestamps writable.

* gnu/packages/bioinformatics.scm (khmer)[arguments]: Add custom phase
to make gzip timestamps writable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
4 years agognu: linux-libre: Update to 5.2.6.
Mark H Weaver [Mon, 5 Aug 2019 01:57:54 +0000 (21:57 -0400)]
gnu: linux-libre: Update to 5.2.6.

* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.6.
(linux-libre-5.2-pristine-source)[hash]: Update hash.

4 years agognu: linux-libre@4.19: Update to 4.19.64.
Mark H Weaver [Mon, 5 Aug 2019 01:57:03 +0000 (21:57 -0400)]
gnu: linux-libre@4.19: Update to 4.19.64.

* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.64.
(linux-libre-4.19-pristine-source)[hash]: Update hash.

4 years agognu: linux-libre@4.14: Update to 4.14.136.
Mark H Weaver [Mon, 5 Aug 2019 01:56:20 +0000 (21:56 -0400)]
gnu: linux-libre@4.14: Update to 4.14.136.

* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.136.
(linux-libre-4.14-pristine-source)[hash]: Update hash.

4 years agognu: linux-libre@4.9: Update to 4.9.187.
Mark H Weaver [Mon, 5 Aug 2019 01:55:23 +0000 (21:55 -0400)]
gnu: linux-libre@4.9: Update to 4.9.187.

* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.187.
(linux-libre-4.9-pristine-source)[hash]: Update hash.

4 years agognu: linux-libre@4.4: Update to 4.4.187.
Mark H Weaver [Mon, 5 Aug 2019 01:54:23 +0000 (21:54 -0400)]
gnu: linux-libre@4.4: Update to 4.4.187.

* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.187.
(linux-libre-4.4-pristine-source)[hash]: Update hash.

4 years agognu: nss: Update to 3.45 [security fixes].
Mark H Weaver [Sat, 3 Aug 2019 23:46:31 +0000 (19:46 -0400)]
gnu: nss: Update to 3.45 [security fixes].

Includes fixes for CVE-2019-11719, CVE-2019-11727, and CVE-2019-11729.

* gnu/packages/nss.scm (nss): Update to 3.45.

4 years agognu: docker-compose: Remove inputs for old Python versions.
Tobias Geerinckx-Rice [Sun, 4 Aug 2019 22:50:28 +0000 (00:50 +0200)]
gnu: docker-compose: Remove inputs for old Python versions.

* gnu/packages/docker.scm (docker-compose)[inputs]:
Remove python2-backport-ssl-match-hostname and python-ipaddress.