Ricardo Wurmus [Mon, 4 Jun 2018 09:25:48 +0000 (11:25 +0200)]
Merge branch 'master' into core-updates
Efraim Flashner [Mon, 4 Jun 2018 07:48:55 +0000 (10:48 +0300)]
gnu: python-pyqt: Update to 5.10.1.
* gnu/packages/qt.scm (python-pyqt): Update to 5.10.1.
[inputs]: Remove qtwebkit.
[arguments]: Add custom phase to fix compilation with Qt 5.11.
Efraim Flashner [Mon, 4 Jun 2018 07:47:50 +0000 (10:47 +0300)]
gnu: python-sip: Update to 4.19.8.
* gnu/packages/qt.scm (python-sip): Update to 4.19.8.
Efraim Flashner [Sun, 3 Jun 2018 16:09:12 +0000 (19:09 +0300)]
gnu: gcompris-qt: Update to 0.91.
* gnu/packages/education.scm (gcompris-qt): Update to 0.91.
[arguments]: Add custom phase to fix building with Qt 5.11.
Efraim Flashner [Sun, 3 Jun 2018 10:17:25 +0000 (13:17 +0300)]
gnu: quassel: Fix building with Qt 5.11.
* gnu/packages/irc.scm (quassel)[sources]: Add patch. Return #t from
snippet.
* gnu/packages/patches/quassel-qt-5.11.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
Rutger Helling [Sun, 3 Jun 2018 10:57:52 +0000 (12:57 +0200)]
gnu: w3m: Enable image support.
* gnu/packages/w3m.scm (w3m)[inputs]: Add gdk-pixbuf, libx11.
Efraim Flashner [Sun, 3 Jun 2018 09:46:01 +0000 (12:46 +0300)]
gnu: keepassxc: Fix compilation with Qt 5.11.
* gnu/packages/password-utils.scm (keepassxc)[arguments]: Add custom
'patch-sources phase to include missing headers.
Mark H Weaver [Sun, 3 Jun 2018 07:36:47 +0000 (03:36 -0400)]
Merge branch 'master' into core-updates
Mark H Weaver [Sun, 3 Jun 2018 07:21:13 +0000 (03:21 -0400)]
gnu: rust: Fix build for armhf and mips64el.
This is a followup to commit
514026d7de36b299238aff9dfcc2f898fb04072a.
* gnu/packages/rust.scm (nix-system->gnu-triplet-for-rust): New variable.
(rust-bootstrap, mrustc, rust-1.23): Use 'nix-system->gnu-triplet-for-rust'
instead of 'nix-system->gnu-triplet'.
Efraim Flashner [Sat, 2 Jun 2018 20:16:05 +0000 (23:16 +0300)]
gnu: xxd: Remove all inherited inputs.
* gnu/packages/vim.scm (xxd)[inputs]: New field, don't inherit from vim.
Efraim Flashner [Sat, 2 Jun 2018 20:04:54 +0000 (23:04 +0300)]
gnu: vim: Update to 8.1.0026.
* gnu/packages/vim.scm (vim): Update to 8.1.0026.
[arguments]: Update substitute list on custom 'patch-config-files phase.
[inputs]: Remove inetutils.
Efraim Flashner [Sat, 2 Jun 2018 19:34:23 +0000 (22:34 +0300)]
gnu: xxd: Return true from all phases.
* gnu/packages/vim.scm (xxd)[arguments]: Return '#t' from custom 'chdir
phase.
Pierre Neidhardt [Fri, 1 Jun 2018 07:50:25 +0000 (09:50 +0200)]
gnu: Add emacs-fish-completion.
* gnu/packages/emacs.scm (emacs-fish-completion): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Pierre Neidhardt [Fri, 1 Jun 2018 07:49:47 +0000 (09:49 +0200)]
gnu: Add emacs-evil-org.
* gnu/packages/emacs.scm (emacs-evil-org): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Pierre Neidhardt [Fri, 1 Jun 2018 07:49:21 +0000 (09:49 +0200)]
gnu: Add emacs-evil-multiedit.
* gnu/packages/emacs.scm (emacs-evil-multiedit): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Pierre Neidhardt [Fri, 1 Jun 2018 07:49:01 +0000 (09:49 +0200)]
gnu: Add emacs-evil-mu4e.
* gnu/packages/emacs.scm (emacs-evil-mu4e): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Pierre Neidhardt [Fri, 1 Jun 2018 07:48:12 +0000 (09:48 +0200)]
gnu: Add emacs-evil-magit.
* gnu/packages/emacs.scm (emacs-evil-magit): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Pierre Neidhardt [Fri, 1 Jun 2018 07:44:06 +0000 (09:44 +0200)]
gnu: Add emacs-evil-ediff.
* gnu/packages/emacs.scm (emacs-evil-ediff): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Ludovic Courtès [Sat, 2 Jun 2018 13:40:03 +0000 (15:40 +0200)]
self: Do not build (guix man-db).
* guix/self.scm (specification->package): Remove "guile-gdbm-ffi" and
"guile2.0-gdbm-ffi".
(compiled-guix)[guile-gdbm-ffi]: Remove.
[dependencies]: Remove it.
[*core-modules*]: Add "guix/man-db.scm" via #:extra-files.
[*extra-modules*]: Exclude "guix/man-db.scm".
Ludovic Courtès [Sat, 2 Jun 2018 13:28:12 +0000 (15:28 +0200)]
gnu: guile-json: Update to 1.0.1.
* gnu/packages/guile.scm (guile-json): Update to 1.0.1.
[source]: Switch to github.com. Adjust 'snippet' to modify
'configure.ac' and 'Makefile.am'.
[native-inputs]: Add AUTOCONF and AUTOMAKE.
Ricardo Wurmus [Sat, 2 Jun 2018 11:44:43 +0000 (13:44 +0200)]
Merge branch 'master' into core-updates
Ricardo Wurmus [Sat, 2 Jun 2018 11:42:05 +0000 (13:42 +0200)]
gnu: r-scater: Update to 1.8.0.
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.8.0.
[propagated-inputs]: Add r-delayedarray ad r-delayedmatrixstats; remove
r-matrixstats and r-biomart.
Ricardo Wurmus [Sat, 2 Jun 2018 11:36:26 +0000 (13:36 +0200)]
import: cran: Update to Bioconductor 3.7.
* guix/import/cran.scm (%bioconductor-version): Update to 3.7.
Ricardo Wurmus [Sat, 2 Jun 2018 11:36:09 +0000 (13:36 +0200)]
gnu: r-mvtnorm: Update to 1.0-8.
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-8.
Ricardo Wurmus [Sat, 2 Jun 2018 11:35:58 +0000 (13:35 +0200)]
gnu: r-rgraphviz: Update to 2.24.0.
* gnu/packages/graph.scm (r-rgraphviz): Update to 2.24.0.
Ricardo Wurmus [Sat, 2 Jun 2018 11:35:20 +0000 (13:35 +0200)]
gnu: r-scran: Update to 1.8.2.
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.8.2.
[propagated-inputs]: Remove r-zoo; add r-delayedmatrixstats and r-delayedarray.
Ricardo Wurmus [Sat, 2 Jun 2018 11:34:59 +0000 (13:34 +0200)]
gnu: r-delayedmatrixstats: Update to 1.2.0.
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.2.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:16:59 +0000 (12:16 +0200)]
gnu: r-singlecellexperiment: Update to 1.2.0.
* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Update to 1.2.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:16:42 +0000 (12:16 +0200)]
gnu: r-beachmat: Update to 1.2.1.
* gnu/packages/bioinformatics.scm (r-beachmat): Update to 1.2.1.
[inputs]: Add zlib.
Ricardo Wurmus [Sat, 2 Jun 2018 10:16:03 +0000 (12:16 +0200)]
gnu: r-rhdf5lib: Update to 1.2.1.
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.2.1.
[arguments]: Adjust substitutions.
Ricardo Wurmus [Sat, 2 Jun 2018 10:15:39 +0000 (12:15 +0200)]
gnu: r-hdf5array: Update to 1.8.0.
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.8.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:15:23 +0000 (12:15 +0200)]
gnu: r-qvalue: Update to 2.12.0.
* gnu/packages/bioinformatics.scm (r-qvalue): Update to 2.12.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:15:07 +0000 (12:15 +0200)]
gnu: r-hitc: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-hitc): Update to 1.24.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:14:52 +0000 (12:14 +0200)]
gnu: r-fithic: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-fithic): Update to 1.6.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:14:23 +0000 (12:14 +0200)]
gnu: r-sushi: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-sushi): Update to 1.18.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:14:06 +0000 (12:14 +0200)]
gnu: r-gwascat: Update to 2.12.0.
* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.12.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:13:51 +0000 (12:13 +0200)]
gnu: r-gviz: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.24.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:13:23 +0000 (12:13 +0200)]
gnu: r-gqtlstats: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-gqtlstats): Update to 1.12.0.
[propagated-inputs]: Add r-homo-sapiens; remove r-ldblock.
Ricardo Wurmus [Sat, 2 Jun 2018 10:12:54 +0000 (12:12 +0200)]
gnu: r-ldblock: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.10.0.
[propagated-inputs]: Add r-biocgenerics.
Ricardo Wurmus [Sat, 2 Jun 2018 10:12:10 +0000 (12:12 +0200)]
gnu: r-erma: Update to 0.12.0.
* gnu/packages/bioinformatics.scm (r-erma): Update to 0.12.0.
[propagated-inputs]: Remove r-foreach; add r-biocparallel, r-genomeinfodb, and
r-iranges.
Ricardo Wurmus [Sat, 2 Jun 2018 10:11:55 +0000 (12:11 +0200)]
gnu: r-snpstats: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-snpstats): Update to 1.30.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:11:33 +0000 (12:11 +0200)]
gnu: r-gqtlbase: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-gqtlbase): Update to 1.12.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:11:18 +0000 (12:11 +0200)]
gnu: r-ggbio: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.28.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:11:02 +0000 (12:11 +0200)]
gnu: r-biovizbase: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.28.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:10:47 +0000 (12:10 +0200)]
gnu: r-organismdbi: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-organismdbi): Update to 1.22.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:10:18 +0000 (12:10 +0200)]
gnu: r-ensembldb: Update to 2.4.1.
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.4.1.
[propagated-inputs]: Remove r-annotationhub.
Ricardo Wurmus [Sat, 2 Jun 2018 10:10:00 +0000 (12:10 +0200)]
gnu: r-dirichletmultinomial: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.22.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:09:42 +0000 (12:09 +0200)]
gnu: r-complexheatmap: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 1.18.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:09:23 +0000 (12:09 +0200)]
gnu: r-genomicfiles: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.16.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:09:08 +0000 (12:09 +0200)]
gnu: r-gage: Update to 2.30.0.
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.30.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:08:50 +0000 (12:08 +0200)]
gnu: r-keggrest: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.20.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:08:27 +0000 (12:08 +0200)]
gnu: r-fastseg: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.26.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:08:09 +0000 (12:08 +0200)]
gnu: r-annotationhub: Update to 2.12.0.
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.12.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:07:49 +0000 (12:07 +0200)]
gnu: r-interactivedisplaybase: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.18.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:07:38 +0000 (12:07 +0200)]
gnu: r-edaseq: Update to 2.14.0.
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.14.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:07:22 +0000 (12:07 +0200)]
gnu: r-deseq: Update to 1.32.0.
* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.32.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:07:01 +0000 (12:07 +0200)]
gnu: r-aroma-light: Update to 3.10.0.
* gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.10.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:06:43 +0000 (12:06 +0200)]
gnu: r-msnid: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.14.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:06:13 +0000 (12:06 +0200)]
gnu: r-msnbase: Update to 2.6.1.
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.6.1.
[propagated-inputs]: Add r-mass and r-scales.
Ricardo Wurmus [Sat, 2 Jun 2018 10:05:43 +0000 (12:05 +0200)]
gnu: r-pcamethods: Update to 1.72.0.
* gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.72.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:05:28 +0000 (12:05 +0200)]
gnu: r-mzid: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.18.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:05:08 +0000 (12:05 +0200)]
gnu: r-vsn: Update to 3.48.1.
* gnu/packages/bioinformatics.scm (r-vsn): Update to 3.48.1.
Ricardo Wurmus [Sat, 2 Jun 2018 10:04:46 +0000 (12:04 +0200)]
gnu: r-affy: Update to 1.58.0.
* gnu/packages/bioinformatics.scm (r-affy): Update to 1.58.0.
[inputs]: Add zlib.
Ricardo Wurmus [Sat, 2 Jun 2018 10:04:28 +0000 (12:04 +0200)]
gnu: r-affyio: Update to 1.50.0.
* gnu/packages/bioinformatics.scm (r-affyio): Update to 1.50.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:04:03 +0000 (12:04 +0200)]
gnu: r-mzr: Update to 2.14.0.
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.14.0.
[inputs]: Add zlib.
[propagated-inputs]: Add r-rhdf5lib.
Ricardo Wurmus [Sat, 2 Jun 2018 10:02:10 +0000 (12:02 +0200)]
gnu: r-protgenerics: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-protgenerics): Update to 1.12.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:01:57 +0000 (12:01 +0200)]
gnu: r-sva: Update to 3.28.0.
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.28.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:01:43 +0000 (12:01 +0200)]
gnu: r-methylkit: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.6.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:01:15 +0000 (12:01 +0200)]
gnu: r-copywriter: Update to 2.12.0.
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.12.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:01:03 +0000 (12:01 +0200)]
gnu: r-chipseq: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.30.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:00:50 +0000 (12:00 +0200)]
gnu: r-annotationfilter: Update to 1.4.0.
* gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.4.0.
Ricardo Wurmus [Sat, 2 Jun 2018 10:00:10 +0000 (12:00 +0200)]
gnu: r-rhdf5: Update to 2.24.0.
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.24.0.
[arguments]: Remove.
[propagated-inputs]: Remove r-zlibbioc; add r-rhdf5lib.
[inputs]: Remove perl.
Ricardo Wurmus [Sat, 2 Jun 2018 09:59:53 +0000 (11:59 +0200)]
gnu: r-tximport: Update to 1.8.0.
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.8.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:59:37 +0000 (11:59 +0200)]
gnu: r-mutationalpatterns: Update to 1.6.1.
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.6.1.
Ricardo Wurmus [Sat, 2 Jun 2018 09:59:23 +0000 (11:59 +0200)]
gnu: r-bamsignals: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.12.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:58:55 +0000 (11:58 +0200)]
gnu: r-rhtslib: Update to 1.12.1.
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.12.1.
[native-inputs]: Remove autoconf.
Ricardo Wurmus [Sat, 2 Jun 2018 09:56:48 +0000 (11:56 +0200)]
gnu: r-zlibbioc: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.26.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:56:34 +0000 (11:56 +0200)]
gnu: r-motifrg: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.24.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:56:18 +0000 (11:56 +0200)]
gnu: r-seqlogo: Update to 1.46.0.
* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.46.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:56:00 +0000 (11:56 +0200)]
gnu: r-genomation: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.12.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:55:39 +0000 (11:55 +0200)]
gnu: r-seqpattern: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.12.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:55:26 +0000 (11:55 +0200)]
gnu: r-impute: Update to 1.54.0.
* gnu/packages/bioinformatics.scm (r-impute): Update to 1.54.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:55:10 +0000 (11:55 +0200)]
gnu: r-bsgenome: Update to 1.48.0.
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.48.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:54:55 +0000 (11:54 +0200)]
gnu: r-topgo: Update to 2.32.0.
* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.32.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:54:40 +0000 (11:54 +0200)]
gnu: r-graph: Update to 1.58.0.
* gnu/packages/bioinformatics.scm (r-graph): Update to 1.58.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:54:15 +0000 (11:54 +0200)]
gnu: r-genomicfeatures: Update to 1.32.0.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.32.0.
[propagated-inputs]: Remove r-rmysql.
Ricardo Wurmus [Sat, 2 Jun 2018 09:53:35 +0000 (11:53 +0200)]
gnu: r-rtracklayer: Update to 1.40.2.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.40.2.
[native-inputs]: Add pkg-config.
Ricardo Wurmus [Sat, 2 Jun 2018 09:53:04 +0000 (11:53 +0200)]
gnu: r-genomicalignments: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.16.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:52:44 +0000 (11:52 +0200)]
gnu: r-summarizedexperiment: Update to 1.10.1.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.10.1.
Ricardo Wurmus [Sat, 2 Jun 2018 09:52:17 +0000 (11:52 +0200)]
gnu: r-delayedarray: Update to 0.6.0.
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.6.0.
[propagated-inputs]: Add r-biocparallel.
Ricardo Wurmus [Sat, 2 Jun 2018 09:51:57 +0000 (11:51 +0200)]
gnu: r-rsamtools: Update to 1.32.0.
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.32.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:51:35 +0000 (11:51 +0200)]
gnu: r-biostrings: Update to 2.48.0.
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.48.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:51:12 +0000 (11:51 +0200)]
gnu: r-biocparallel: Update to 1.14.1.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.14.1.
Ricardo Wurmus [Sat, 2 Jun 2018 09:50:56 +0000 (11:50 +0200)]
gnu: r-biomart: Update to 2.36.1.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.36.1.
Ricardo Wurmus [Sat, 2 Jun 2018 09:50:34 +0000 (11:50 +0200)]
gnu: r-annotationdbi: Update to 1.42.1.
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.42.1.
Ricardo Wurmus [Sat, 2 Jun 2018 09:50:13 +0000 (11:50 +0200)]
gnu: r-biobase: Update to 2.40.0.
* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.40.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:49:57 +0000 (11:49 +0200)]
gnu: r-genomicranges: Update to 1.32.3.
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.32.3.
Ricardo Wurmus [Sat, 2 Jun 2018 09:49:44 +0000 (11:49 +0200)]
gnu: r-xvector: Update to 0.20.0.
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.20.0.
Ricardo Wurmus [Sat, 2 Jun 2018 09:49:31 +0000 (11:49 +0200)]
gnu: r-limma: Update to 3.36.1.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.36.1.
Ricardo Wurmus [Sat, 2 Jun 2018 09:49:17 +0000 (11:49 +0200)]
gnu: r-variantannotation: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.26.0.
HCoop / jackhill / guix / guix.git / log