gnu: python-flask-sqlalchemy: Update to 2.4.4.

* gnu/packages/python-web.scm (python-flask-sqlalchemy): Update to 2.4.4.

gnu: guix: Update to 1.1.0-18.0addee1.

* gnu/packages/package-management.scm (guix): Update to 1.1.0-18.0addee1.

installer: Add NTFS support.

This adds support for creating and editing NTFS partitions. It is however not
possible yet to create root NTFS partitions, as overlaying on top of a fuse
partition does not seem supported.

* gnu/installer.scm (installer-program): Add "ntfs-3g" to the inputs.
* gnu/installer/parted.scm (user-fs-type-name, user-fs-type->mount-type,
partition-filesystem-user-type, create-ntfs-file-system,
format-user-partitions): Add NTFS support.
* gnu/installer/newt/partition.scm (run-fs-type-page): Add NTFS support.

file-systems: Add NTFS support.

* gnu/system/uuid.scm (%ntfs-endianness): New macro,
(ntfs-uuid->string): new procedure,
(%ntfs-endianness): new variable,
(string->ntfs-uuid): new exported procedure,
(%uuid-parsers): add NTFS support,
(%uuid-printers): add NTFS support.
* gnu/build/file-systems.scm (%ntfs-endianness): New macro,
(ntfs-superblock?, read-ntfs-superblock, ntfs-superblock-uuid,
check-ntfs-file-system): new procedure,
(%partition-uuid-readers): add NTFS support,
(check-file-system): add NTFS support.

gnu: newsboat: Update to 2.20.1.

* gnu/packages/syndication.scm (newsboat): Update to 2.20.1.
[source]: Add snippet to loosen version requirement on crate dependency.
[build-system]: Switch to cargo-build-system.
[native-inputs]: Remove asciidoc, add openssl, asciidoctor.
[arguments]: Add gnu-build-system module. Add vendor-dir, cargo-inputs,
cargo-development-inputs fields. Don't delete 'configure phase. Add
custom 'dont-vendor-self-phase. Replace 'build, 'check, 'install phases
with gnu counterparts.
(newsboat-2.13): New variable.

gnu: emacs-ctrlf: Update to 1.1.

* gnu/packages/emacs-xyz.scm (emacs-ctrlf): Update to 1.1.

gnu: emacs-prescient: Update to 5.0.

* gnu/packages/emacs-xyz.scm (emacs-prescient): Update to 5.0.

gnu: emacs-selectrum: Update to 2.0.

* gnu/packages/emacs-xyz.scm (emacs-selectrum): Update to 2.0.

gnu: emacs-chronometrist: Update to 0.5.3.

* gnu/packages/emacs-xyz.scm (emacs-chronometrist): Update to 0.5.3.
[source]: Update URL.
[arguments]: Add phases.
[propagated-inputs]: Add `emacs-ts'.
[home-page]: Update URL.

gnu: grammalecte: Update to 1.11.0.

* gnu/packages/dictionaries.scm (grammalecte): Update to 1.11.0.

gnu: rust-serde-test-1.0: Remove minor version from package name.

* gnu/packages/crates-io.scm (rust-serde-test-1.0): Rename to
rust-serde-test-1.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>

gnu: rust-serde-derive-1.0: Remove minor version from package name.

* gnu/packages/crates-io.scm (rust-serde-derive-1.0): Rename to
rust-serde-derive-1.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>

gnu: rust-serde-json-1.0: Remove minor version from package name.

* gnu/packages/crates-io.scm (rust-serde-json-1.0): Rename to rust-serde-json-1.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>

gnu: rust-serde-1.0: Remove minor version from package name.

* gnu/packages/crates-io.scm (rust-serde-1.0): Rename to rust-serde-1.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>

gnu: Add xmenu.

* gnu/packages/wm.scm (xmenu): New variable.

gnu: Add xclickroot.

* gnu/packages/wm.scm (xclickroot): New variable.

gnu: glibc: Remove old versions.

* gnu/packages/patches/glibc-CVE-2015-5180.patch,
gnu/packages/patches/glibc-CVE-2015-7547.patch,
gnu/packages/patches/glibc-CVE-2016-3075.patch,
gnu/packages/patches/glibc-CVE-2016-3706.patch,
gnu/packages/patches/glibc-CVE-2016-4429.patch,
gnu/packages/patches/glibc-CVE-2017-1000366-pt1.patch,
gnu/packages/patches/glibc-CVE-2017-1000366-pt2.patch,
gnu/packages/patches/glibc-CVE-2017-1000366-pt3.patch,
gnu/packages/patches/glibc-o-largefile.patch,
gnu/packages/patches/glibc-vectorized-strcspn-guards.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/base.scm (glibc-2.26, glibc-2.25, glibc-2.24, glibc-2.23,
glibc-2.22): Remove variables.

gnu: ungoogled-chromium: Use tcmalloc.

* gnu/packages/chromium.scm (%preserved-third-party-files): Preserve the
bundled fork of tcmalloc.
(ungoogled-chromium)[arguments]: Remove "use_allocator" from #:configure-flags.

gnu: icecat: Add libxscrnsaver to runtime LD_LIBRARY_PATH

IceCat loads libXss.so at runtime to inhibit screen locking if other interfaces are unavailable.

* gnu/packages/gnuzilla.scm (icecat)[arguments]: Add libxscrnsaver to
wrap-program arguments.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>

gnu: emacs-treemacs-extra: Fix build.

* gnu/packages/emacs-xyz.scm (emacs-treemacs-extra)[propagated-inputs]: Add
EMACS-PERSP-MODE.

gnu: Add emacs-org-generate.

* gnu/packages/emacs-xyz.scm (emacs-org-generate): New variable.

gnu: Add emacs-cort.

* gnu/packages/emacs-xyz.scm (emacs-cort): New variable.

gnu: emacs-ansi: Update to 0.4.1-1.a41d5cc.

* gnu/packages/emacs-xyz.scm (emacs-ansi): Update to 0.4.1-1.a41d5cc.

gnu: quassel: Fix icons in Qt interface.

* gnu/packages/irc.scm (quassel)[inputs]: Add qtsvg.
[build-system]: Switch to qt-build-system.

gnu: nomad: Fix build.

* gnu/packages/guile-xyz.scm (nomad)[inputs]: Use Guile 2.2 library packages.
[arguments]: Treat warnings as warnings.

gnu: flint: Update to 2.6.1.

* gnu/packages/algebra.scm (flint): Update to 2.6.1.

gnu: kyotocabinet: Update to 1.2.78.

* gnu/packages/databases.scm (kyotocabinet): Update to 1.2.78.

guix system: Report file system errors using 'report-error'.

* guix/scripts/system.scm (check-file-system-availability)[file-system-location*]:
Return a <location> record instead of a string.
[error]: Use 'report-error' instead of 'format'.
Change callers accordingly.

Use 'formatted-message' instead of '&message' where appropriate.

* gnu.scm (%try-use-modules): Use 'formatted-message' instead of
'&message'.
* gnu/machine/digital-ocean.scm (maybe-raise-unsupported-configuration-error):
Likewise.
* gnu/machine/ssh.scm (machine-check-file-system-availability): Likewise.
(machine-check-building-for-appropriate-system): Likewise.
(deploy-managed-host): Likewise.
(maybe-raise-unsupported-configuration-error): Likewise.
* gnu/packages.scm (search-patch): Likewise.
* gnu/services.scm (%service-with-default-value): Likewise.
(files->etc-directory): Likewise.
(fold-services): Likewise.
* gnu/system.scm (locale-name->definition*): Likewise.
* gnu/system/mapped-devices.scm (check-device-initrd-modules): Likewise.
(check-luks-device): Likewise.
* guix/channels.scm (latest-channel-instance): Likewise.
* guix/cve.scm (json->cve-items): Likewise.
* guix/git-authenticate.scm (commit-signing-key): Likewise.
(commit-authorized-keys): Likewise.
(authenticate-commit): Likewise.
(verify-introductory-commit): Likewise.
* guix/remote.scm (remote-pipe-for-gexp): Likewise.
* guix/scripts/graph.scm (assert-package): Likewise.
* guix/scripts/offload.scm (private-key-from-file*): Likewise.
* guix/ssh.scm (authenticate-server*): Likewise.
(open-ssh-session): Likewise.
(remote-inferior): Likewise.
* guix/ui.scm (matching-generations): Likewise.
* guix/upstream.scm (package-update): Likewise.
* tests/channels.scm ("latest-channel-instances, missing introduction for 'guix'"):
Catch 'formatted-message?'.
("authenticate-channel, wrong first commit signer"): Likewise.
* tests/lint.scm ("patches: not found"): Adjust message string.
* tests/packages.scm ("patch not found yields a run-time error"): Catch
'formatted-message?'.
* guix/lint.scm (check-patch-file-names): Handle 'formatted-message?'.
(check-derivation): Ditto.

diagnostics: Add '&formatted-message'.

This allows 'gettext' to be called on the format string at the site
where the exception is caught (rather than the site where it's thrown).
It also allows for argument highlighting.

* guix/diagnostics.scm (&formatted-message): New condition type.
(check-format-string): New procedure.
(formatted-message): New macro.
* guix/ui.scm (report-load-error): Add clause for 'formatted-message?'.
(warn-about-load-error): Likewise.
(call-with-error-handling): Likewise.
(read/eval): Likewise.

diagnostics: Add a procedural variant of diagnostic procedures.

Callers can pass 'report-error', 'warning', etc. to 'apply'.

* guix/diagnostics.scm (trivial-format-string?): New procedure, moved
from...
(highlight-argument): ... here.
(define-diagnostic): Add 'identifier?' clause.
(emit-diagnostic): New procedure.

ui: Factorize '&message' handling.

* guix/ui.scm (call-with-error-handling): Factorize the three
'message-condition?' clauses into one.

file-systems: Convey hint via '&fix-hint'.

* gnu/system/file-systems.scm (btrfs-store-subvolume-file-name): Use
'&fix-hint' for the hint.

utils: Move '&fix-hint' to (guix diagnostics).

* guix/utils.scm (&fix-hint): Move to...
* guix/diagnostics.scm (&fix-hint): ... here.
* gnu.scm: Adjust imports accordingly.
* gnu/system/mapped-devices.scm: Likewise.
* guix/channels.scm: Likewise.
* guix/profiles.scm: Likewise.
* guix/scripts/system/reconfigure.scm: Likewise.
* guix/ssh.scm: Likewise.

utils: Remove compatibility re-export of 'memoize'.

The 'memoize' binding was re-exported in 2016, commit
19e1d5f7f90194f1ac7e783b28a688ce1441786d, as a backwards-compatibility
measure that makes little sense now.

* guix/utils.scm: Don't re-export 'memoize'.
* guix/import/pypi.scm: Adjust imports.
* tests/pypi.scm: Remove duplicate (guix memoization) import.

utils: Move <location> and '&error-location' to (guix diagnostics).

* guix/utils.scm (<location>, source-properties->location)
(location->source-properties, &error-location): Move to...
* guix/diagnostics.scm: ... here.
* gnu.scm: Adjust imports accordingly.
* gnu/machine.scm: Likewise.
* gnu/system.scm: Likewise.
* gnu/tests.scm: Likewise.
* guix/inferior.scm: Likewise.
* tests/channels.scm: Likewise.
* tests/packages.scm: Likewise.

gnu: beets: Support replaygain plugin.

* gnu/packages/music.scm (beets)[arguments]: Add 'wrap-typelib phase.
[inputs]: Add gstreamer, gst-plugins-base, gst-plugins-good,
gobject-introspection and python-pygobject.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add python-pre-commit.

* gnu/packages/version-control.scm (pre-commit): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add python-pytest-env.

* gnu/packages/python-check.scm (python-pytest-env): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add python-nodeenv.

* gnu/packages/python-xyz.scm (python-nodeenv): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add python-identify.

* gnu/packages/python-xyz.scm (python-identify): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add python-cfgv.

* gnu/packages/python-xyz.scm (python-cfgv): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add python-covdefaults.

* gnu/packages/python-check.scm (python-covdefaults): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add python-pytest-mpl.

* gnu/packages/python-check.scm (python-pytest-mpl): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add python-pytest-remotedata.

* gnu/packages/python-check.scm (python-pytest-remotedata): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add python-pytest-openfiles.

* gnu/packages/python-check.scm (python-pytest-openfiles): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add python-pytest-filter-subpackage.

* gnu/packages/python-check.scm (python-pytest-filter-subpackage): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add python-pytest-doctestplus.

* gnu/packages/python-check.scm (python-pytest-doctestplus): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add python-pytest-arraydiff.

* gnu/packages/python-check.scm (python-pytest-arraydiff): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: python-typing-extension: Update to 3.7.4.2.

* gnu/packages/python-xyz.scm (python-typing-extension): Update to 3.7.4.2.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: Add syncthing-gtk.

* gnu/packages/syncthing.scm (syncthing-gtk): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>

gnu: procenv: Check is a native input.

* gnu/packages/linux.scm (procenv)[inputs]: Move CHECK ...
[native-inputs]: ... here.

gnu: libsigrok: Remove unused input.

* gnu/packages/electronics.scm (libsigrok)[native-inputs]: Remove CHECK.

gnu: ao: Update source URI.

* gnu/packages/xiph.scm (ao)[source](uri): Adjust to current.

gnu: Add emacs-shx.

* gnu/packages/emacs-xyz.scm (emacs-shx): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

gnu: Add guile-lzlib.

* gnu/packages/guile-xyz.scm (guile-lzlib): New variable.

gnu: Add guile-zlib.

* gnu/packages/guile-xyz.scm (guile-zlib): New variable.

gnu: emacs-erc-hl-nicks: Update to 1.3.4.

* gnu/packages/emacs-xyz.scm (emacs-erc-hl-nicks): Update to 1.3.4.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

gnu: emacs-helm: Update to 3.6.4.

From 451290515c14b44aa00bd542e13a00a3898d4a90 Mon Sep 17 00:00:00 2001
From: Michael Rohleder <mike@rohleder.de>
Date: Mon, 20 Jul 2020 18:36:09 +0200
Subject: [PATCH] gnu: emacs-helm: Update to 3.6.4.

* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.6.4.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

gnu: emacs-org-re-reveal: Update to 3.0.2.

From 1c27f0dd4ab904319ba2b11c29afea07b7f4aca9 Mon Sep 17 00:00:00 2001
From: Michael Rohleder <mike@rohleder.de>
Date: Mon, 20 Jul 2020 18:55:29 +0200
Subject: [PATCH] gnu: emacs-org-re-reveal: Update to 3.0.2.

* gnu/packages/emacs-xyz.scm (emacs-org-re-reveal): Update to 3.0.2.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

gnu: Add azimuth.

* gnu/packages/games.scm (azimuth): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

gnu: squeak-vm: Enter build directory once.

* gnu/packages/smalltalk.scm (squeak-vm)[arguments]: Use CHDIR instead of
pseudofunctional WITH-DIRECTORY-EXCURSIONs.  Drop the custom ‘build’ phase.

gnu: squeak-vm: Update home page.

* gnu/packages/smalltalk.scm (squeak-vm)[source, home-page]: Drop ‘www’ subdomain.

gnu: wine-staging: Update to 5.13.

* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 5.13.

gnu: mpg123: Update to 1.26.3.

* gnu/packages/mp3.scm (mpg123): Update to 1.26.3.

gnu: burp: Enable the live status monitor.

* gnu/packages/backup.scm (burp)[inputs]: Add ncurses.

gnu: bshapr: Update to 0.9.

* gnu/packages/music.scm (bshapr): Update to 0.9.

gnu: fswatch: Update to 1.15.0.

* gnu/packages/monitoring.scm (fswatch): Update to 1.15.0.

gnu: python-tomlkit: Update to 0.6.0.

* gnu/packages/python-xyz.scm (python-tomlkit): Update to 0.6.0.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

gnu: python-pifpaf: Update to 2.5.0.

* gnu/packages/python-xyz.scm (python-pifpaf): Update to 2.5.0.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

gnu: poetry: Update to 1.0.10.

* gnu/packages/python-xyz.scm (poetry): Update to 1.0.10.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

gnu: emacs-writeroom: Update to 3.10.

From f5c5d622aaf58bc485f73568513998cda35a8d2e Mon Sep 17 00:00:00 2001
From: Michael Rohleder <mike@rohleder.de>
Date: Fri, 24 Jul 2020 13:46:39 +0200
Subject: [PATCH] gnu: emacs-writeroom: Update to 3.10.

* gnu/packages/emacs-xyz.scm (emacs-writeroom): Update to 3.10.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

gnu: emacs-helm-ag: Update to 0.62.

From 2a2b347b4abbd91eaf09f61643fdd22b51b21d4d Mon Sep 17 00:00:00 2001
From: Michael Rohleder <mike@rohleder.de>
Date: Fri, 24 Jul 2020 13:17:59 +0200
Subject: [PATCH] gnu: emacs-helm-ag: Update to 0.62.

* gnu/packages/emacs-xyz.scm (emacs-helm-ag): Update to 0.62.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

gnu: emacs-helm-gtags: Update to 1.5.7.

From 4399c3eb815a16ae21c85bad33cd3c69e8d43c4f Mon Sep 17 00:00:00 2001
From: Michael Rohleder <mike@rohleder.de>
Date: Fri, 24 Jul 2020 12:14:34 +0200
Subject: [PATCH] gnu: emacs-helm-gtags: Update to 1.5.7.

* gnu/packages/emacs-xyz.scm (emacs-helm-gtags): Update to 1.5.7.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

services: nix: Add extra-options.

* gnu/services/nix.scm (<nix-configuration>)[extra-options]: New field.
(nix-shepherd-service): Add this.
(nix-activation): Add new line to the end of /etc/nix/nix.conf file.
* doc/guix.texi (Miscellaneous Services)[Nix service]: Document this.

services: nix: Fix typo.

* gnu/services/nix.scm (<nix-configuration>): Fix typo.

services: nix: Export nix-configuration.

* gnu/services/nix.scm (nix-configuration, nix-configuration?): Export.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

services: nix: Provide nix commands.

* gnu/services/nix.scm (nix-service-type): Extend profile-service-type to
provide nix commands.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>

gnu: Add srain.

* gnu/packages/irc.scm (srain): New package.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

gnu: Add bashtop.

* gnu/packages/admin.scm (bashtop): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

gnu: Replace transset-df with transset.

transset-df was last updated in 2007.  The patches got merged upstream a long
time ago, which is maintained by the X.Org project.

* gnu/packages/xorg.scm (transset): New variable.
(transset-df): Define as ‘deprecated package’.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

gnu: emacs-use-package: Install texinfo manual.

* gnu/packages/emacs-xyz.scm (emacs-use-package).

[native-inputs]: Add texinfo.

[arguments]: Add phase for installation of the texinfo manual.

Signed-off-by: Brett Gilio <brettg@gnu.org>

gnu: chroma: Configure with inline attribute.

* gnu/packages/games.scm (chroma)[configure-flags]: Add flag to properly
support inline attribute of STD C89.

Signed-off-by: Brett Gilio <brettg@gnu.org>

gnu: emacs-telega: Update to 0.6.28.

* gnu/packages/emacs-xyz.scm (emacs-telega): Update to 0.6.28.

gnu: i3-gaps: Update to 4.18.1.

* gnu/packages/wm.scm (i3-gaps): Update to 4.18.1.

Signed-off-by: Brett Gilio <brettg@gnu.org>

gnu: libseccomp: Skip test that fails in QEMU user-mode emulation.

* gnu/packages/linux.scm (libseccomp)[arguments]: Add phase to skip one test.

gnu: libseccomp: Do not build the static library.

* gnu/packages/linux.scm (libseccomp)[arguments]: New field.

gnu: ccid: Update to 1.4.33.

* gnu/packages/security-token.scm (ccid): Update to 1.4.33.

gnu: nginx: Update to 1.19.1.

* gnu/packages/web.scm (nginx): Update to 1.19.1.

gnu: rocksdb: Update to 6.11.4.

* gnu/packages/databases.scm (rocksdb): Update to 6.11.4.

gnu: libseccomp: Update to 2.5.0.

* gnu/packages/linux.scm (libseccomp): Update to 2.5.0.
[native-inputs]: Add GPERF.

gnu: hitch: Update to 1.6.0.

* gnu/packages/web.scm (hitch): Update to 1.6.0.

gnu: libaacs: Update to 0.11.0.

* gnu/packages/video.scm (libaacs): Update to 0.11.0.

gnu: ffmpeg: Update to 4.3.1.

* gnu/packages/video.scm (ffmpeg): Update to 4.3.1.

gnu: re2: Update to 2020-07-06.

* gnu/packages/regex.scm (re2): Update to 2020-07-06.
[source](modules, snippet): Remove.

gnu: spdlog: Update to 1.7.0.

* gnu/packages/logging.scm (spdlog): Update to 1.7.0.

gnu: fluidsynth: Update to 2.1.4.

* gnu/packages/audio.scm (fluidsynth): Update to 2.1.4.

gnu: exiv2: Update to 0.27.3.

* gnu/packages/image.scm (exiv2): Update to 0.27.3.

gnu: libebml: Update to 1.4.0.

* gnu/packages/xml.scm (libebml): Update to 1.4.0.

gnu: libmatroska: Update to 1.6.0.

* gnu/packages/video.scm (libmatroska): Update to 1.6.0.