jackhill/guix/guix.git
4 years agognu: telephony: Move Jami and its dependencies to jami.scm.
Jan Wielkiewicz [Sat, 2 May 2020 01:14:36 +0000 (03:14 +0200)]
gnu: telephony: Move Jami and its dependencies to jami.scm.

Jami is a massive package and its developers modify many libraries. Keeping
them in a single file makes maintenance easier.

* gnu/packages/telephony.scm (%jami-version, jami-source,
pjproject-jami, libring, libringclient,
jami, jami-client-gnome): Move to ...
* gnu/packages/jami.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
4 years agognu: opendht: Update to 2.0.0.
Jan Wielkiewicz [Sat, 2 May 2020 01:14:50 +0000 (03:14 +0200)]
gnu: opendht: Update to 2.0.0.

* gnu/packages/networking.scm (opendht): Update to 2.0.0.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
4 years agognu: restinio: Update to 0.6.1.1.
Jan Wielkiewicz [Sat, 2 May 2020 01:14:44 +0000 (03:14 +0200)]
gnu: restinio: Update to 0.6.1.1.

* gnu/packages/networking.scm (restinio): Update to 0.6.1.1.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
4 years agognu: libupnp: Update to 1.8.6.
Jan Wielkiewicz [Sat, 2 May 2020 01:14:41 +0000 (03:14 +0200)]
gnu: libupnp: Update to 1.8.6.

* gnu/packages/upnp.scm (libupnp): Update to 1.8.6.
[source]: Use git-fetch on the new official repository.
[native-inputs]: Add autoconf, automake, libtool and pkg-config.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
4 years agognu: Add libnatpmp.
Jan Wielkiewicz [Sat, 2 May 2020 01:14:39 +0000 (03:14 +0200)]
gnu: Add libnatpmp.

* gnu/packages/networking.scm (libnatpmp): New variable.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
4 years agognu: Add f2fs-tools-static.
raingloom [Sat, 2 May 2020 09:38:48 +0000 (11:38 +0200)]
gnu: Add f2fs-tools-static.

* gnu/packages/file-systems.scm (f2fs-tools/static): New public variable.

Co-authored-by: Danny Milosavljevic <dannym@scratchpost.org>
4 years agognu: emacs-exwm-edit: Update to 20200126.
Pierre Neidhardt [Sat, 2 May 2020 09:02:36 +0000 (11:02 +0200)]
gnu: emacs-exwm-edit: Update to 20200126.

* gnu/packages/emacs-xyz.scm (emacs-exwm-edit): Update to 20200126.

4 years agolinux-initrd: Add initial support for F2FS.
raingloom [Fri, 3 Apr 2020 05:00:41 +0000 (07:00 +0200)]
linux-initrd: Add initial support for F2FS.

* gnu/system/linux-initrd.scm (file-system-type-modules): Add f2fs module.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
4 years agofile-systems: Add support for F2FS.
raingloom [Fri, 3 Apr 2020 00:32:23 +0000 (02:32 +0200)]
file-systems: Add support for F2FS.

* gnu/build/file-systems.scm (%f2fs-endianness): New syntax.
(f2fs-superblock?, read-f2fs-superblock, f2fs-superblock-uuid)
(f2fs-superblock-volume-name, check-f2fs-file-system): New procedures.
(%partition-label-readers, %partition-uuid-readers, check-file-system): Register them.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
4 years agoservices: dnsmasq: Support the --address flag.
Pierre Langlois [Fri, 10 Apr 2020 16:00:47 +0000 (17:00 +0100)]
services: dnsmasq: Support the --address flag.

Introduce a new `addresses' field that translates to passing `--address='
multiple times to dnsmasq.

* gnu/services/dns.scm (<dnsmasq-configuration>): Add an addresses field.
(dnsmasq-shepherd-service): Match the addresses field and translate it to
multiple '--address=' flags.
* doc/guix.texi (DNS Services): Document it.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
4 years agognu: git-annex: Update to 8.20200501.
Kyle Meyer [Fri, 1 May 2020 22:40:02 +0000 (18:40 -0400)]
gnu: git-annex: Update to 8.20200501.

* gnu/packages/haskell-apps.scm (git-annex): Update to 8.20200501.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
4 years agognu: emacs-parsebib: Add Texinfo markup.
Nicolas Goaziou [Sat, 2 May 2020 00:27:44 +0000 (02:27 +0200)]
gnu: emacs-parsebib: Add Texinfo markup.

* gnu/packages/emacs-xyz.scm (emacs-parsebib)
[synopsis]:
[description]: Add Texinfo markup.

4 years agognu: emacs-ebib: Add Texinfo markup in description.
Nicolas Goaziou [Sat, 2 May 2020 00:26:21 +0000 (02:26 +0200)]
gnu: emacs-ebib: Add Texinfo markup in description.

* gnu/packages/emacs-xyz.scm (emacs-ebib)[description]: Add Texinfo markup.

4 years agognu: emacs-ebib: Update to 2.22.1.
Nicolas Goaziou [Sat, 2 May 2020 00:19:59 +0000 (02:19 +0200)]
gnu: emacs-ebib: Update to 2.22.1.

* gnu/packages/emacs-xyz.scm (emacs-ebib): Update to 2.22.1.

4 years agognu: emacs-parsebib: Update to 2.3.3.
Nicolas Goaziou [Sat, 2 May 2020 00:19:16 +0000 (02:19 +0200)]
gnu: emacs-parsebib: Update to 2.3.3.

* gnu/packages/emacs-xyz.scm (emacs-parsebib): Update to 2.3.3.

4 years agognu: Add ladspa-bs2b
Jonathan Frederickson [Fri, 1 May 2020 00:58:01 +0000 (20:58 -0400)]
gnu: Add ladspa-bs2b

* gnu/packages/audio.scm (ladspa-bs2b): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
4 years agognu: icu4c: Update source URI.
Marius Bakke [Fri, 1 May 2020 18:36:09 +0000 (20:36 +0200)]
gnu: icu4c: Update source URI.

The previous URL started serving a HTML page, which ultimately refers to
<https://github.com/unicode-org/icu/releases>.
Reported by butterypancake on #guix.

* gnu/packages/icu4c.scm (icu4c)[source](uri): Change to GitHub.

4 years agognu: xfe: Use a mirror:// URL.
Nicolas Goaziou [Fri, 1 May 2020 20:19:43 +0000 (22:19 +0200)]
gnu: xfe: Use a mirror:// URL.

* gnu/packages/disk.scm (xfe)[source]: Use a mirror://sourceforge URL.

4 years agognu: emacs-emms: Update to 5.4.
Nicolas Goaziou [Fri, 1 May 2020 20:12:22 +0000 (22:12 +0200)]
gnu: emacs-emms: Update to 5.4.

* gnu/packages/emacs-xyz.scm (emacs-emms): Update to 5.4.

4 years agognu: xfe: Fix configuration and icons.
Raghav Gururajan [Fri, 1 May 2020 16:45:03 +0000 (12:45 -0400)]
gnu: xfe: Fix configuration and icons.

* gnu/packages/disk.scm (xfe)[arguments]<#:make-flags>: Remove
BASH_COMPLETION_DIR.
[arguments]<#:phases>[patch-xferc-path]: Remove phase.
[arguments]<#:phases>[patch-xfe-paths]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
4 years agognu: serd: Update to 0.30.4.
Tobias Geerinckx-Rice [Fri, 1 May 2020 14:19:24 +0000 (16:19 +0200)]
gnu: serd: Update to 0.30.4.

* gnu/packages/rdf.scm (serd): Update to 0.30.4.

4 years agognu: quazip: Update to 0.9.
Tobias Geerinckx-Rice [Fri, 1 May 2020 14:31:57 +0000 (16:31 +0200)]
gnu: quazip: Update to 0.9.

* gnu/packages/compression.scm (quazip): Update to 0.9.

4 years agognu: scummvm: Update to 2.1.2.
Tobias Geerinckx-Rice [Fri, 1 May 2020 12:19:03 +0000 (14:19 +0200)]
gnu: scummvm: Update to 2.1.2.

* gnu/packages/emulators.scm (scummvm): Update to 2.1.2.

4 years agognu: teeworlds: Update to 0.7.5.
Tobias Geerinckx-Rice [Fri, 1 May 2020 12:18:52 +0000 (14:18 +0200)]
gnu: teeworlds: Update to 0.7.5.

* gnu/packages/games.scm (teeworlds): Update to 0.7.5.

4 years agognu: crispy-doom: Update to 5.8.0.
Tobias Geerinckx-Rice [Fri, 1 May 2020 12:02:43 +0000 (14:02 +0200)]
gnu: crispy-doom: Update to 5.8.0.

* gnu/packages/games.scm (crispy-doom): Update to 5.8.0.

4 years agognu: five-or-more: Update to 3.32.2.
Tobias Geerinckx-Rice [Fri, 1 May 2020 12:02:27 +0000 (14:02 +0200)]
gnu: five-or-more: Update to 3.32.2.

* gnu/packages/gnome.scm (five-or-more): Update to 3.32.2.

4 years agognu: scintilla: Update to 4.3.3.
Nicolas Goaziou [Fri, 1 May 2020 14:42:53 +0000 (16:42 +0200)]
gnu: scintilla: Update to 4.3.3.

* gnu/packages/text-editors.scm (scintilla): Update to 4.3.3.

4 years agodoc: Move 'Dictionary Service' under 'Miscellaneous Services'.
Brice Waegeneire [Fri, 1 May 2020 14:22:55 +0000 (16:22 +0200)]
doc: Move 'Dictionary Service' under 'Miscellaneous Services'.

* doc/guix.texi (Dictionary Service): Renamed to singular and changed
from 'subsubsection' to 'subheading'.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
4 years agodoc: Replace section 'Early OOM service' by 'Linux Services'.
Brice Waegeneire [Fri, 1 May 2020 14:22:54 +0000 (16:22 +0200)]
doc: Replace section 'Early OOM service' by 'Linux Services'.

* doc/guix.texi (Linux Services): Changed from 'subsubheading' to
'subsection'.
(Early OOM Service, Kernel Module Loader Service): Moved under 'Linux
Services'.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
4 years agognu: udevil: Fix loading of setuid-programs.
Raghav Gururajan [Tue, 28 Apr 2020 06:29:36 +0000 (02:29 -0400)]
gnu: udevil: Fix loading of setuid-programs.

* gnu/packages/disk.scm (udevil)[arguments]<#:configure-flags>: Add
"--with-mount-prog", "--with-umount-prog", "--with-losetup-prog",
"--with-setfacl-prog".
[arguments]<#:phases>[patch-udevil-reference]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
4 years agognu: frescobaldi: Use HTTPS home page URI.
Nicolas Goaziou [Fri, 1 May 2020 14:37:32 +0000 (16:37 +0200)]
gnu: frescobaldi: Use HTTPS home page URI.

* gnu/packages/music.scm (frescobaldi)[home-page]: Use HTTPS URI.

4 years agognu: frescobaldi: Update to 3.1.2.
Nicolas Goaziou [Fri, 1 May 2020 14:37:07 +0000 (16:37 +0200)]
gnu: frescobaldi: Update to 3.1.2.

* gnu/packages/music.scm (frescobaldi): Update to 3.1.2.

4 years agognu: fet: Update to 5.44.4.
Nicolas Goaziou [Fri, 1 May 2020 14:23:52 +0000 (16:23 +0200)]
gnu: fet: Update to 5.44.4.

* gnu/packages/education.scm (fet): Update to 5.44.4.
[description]: Remove uninformative part.

4 years agognu: emacs-web-mode: Update to 17.
Nicolas Goaziou [Fri, 1 May 2020 14:14:58 +0000 (16:14 +0200)]
gnu: emacs-web-mode: Update to 17.

* gnu/packages/emacs-xyz.scm (emacs-web-mode): Update to 17.
[description]: "web-mode" -> "web mode".

4 years agognu: Update emacs-modus-themes.
Nicolas Goaziou [Fri, 1 May 2020 14:10:15 +0000 (16:10 +0200)]
gnu: Update emacs-modus-themes.

* gnu/packages/emacs-xyz.scm (emacs-modus-operandi-theme):
(emacs-modus-vivendi-theme): Update to 0.8.0.

4 years agosystem: Blacklist usbkbd kernel module in default kernel-arguments.
Florian Pelz [Fri, 1 May 2020 09:08:07 +0000 (11:08 +0200)]
system: Blacklist usbkbd kernel module in default kernel-arguments.

This is said to avoid a race with the usbhid kernel module.
See <https://issues.guix.gnu.org/35574#18>.

* gnu/system.scm (%default-modprobe-blacklist): Blacklist it.

4 years agognu: spacefm: Fix privilege and disk management.
Raghav Gururajan [Thu, 30 Apr 2020 13:44:32 +0000 (09:44 -0400)]
gnu: spacefm: Fix privilege and disk management.

* gnu/packages/lxde.scm (spacefm)[inputs]: Remove dbus.
Add ktsuss.
[arguments]<#:phases>[patch-source-files]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
4 years agosystem: Blacklist usbmouse kernel module in default kernel-arguments.
Florian Pelz [Wed, 29 Apr 2020 15:17:55 +0000 (17:17 +0200)]
system: Blacklist usbmouse kernel module in default kernel-arguments.

This avoids a race with the bcm5974 kernel module.
Fixes <https://bugs.gnu.org/35574>.

* gnu/system.scm (%default-modprobe-blacklist): New variable.
(<operating-system>)[kernel-arguments]: Default to ...
(%default-kernel-arguments): ... this new variable.
* doc/guix.texi (operating-system Reference): Document the change.

4 years agoRevert "install: Pass "modprobe.blacklist=radeon"."
Florian Pelz [Wed, 29 Apr 2020 16:22:48 +0000 (18:22 +0200)]
Revert "install: Pass "modprobe.blacklist=radeon"."

This reverts commit 785919121066a10b291d783b6903b5e368e992a8, which is no longer
needed since uvesafb was added in 557e6820a77b24f8f3f03f28ee473137b1caeb64.

4 years agognu: VLC: Update to 3.0.10.
Leo Famulari [Thu, 30 Apr 2020 21:50:16 +0000 (17:50 -0400)]
gnu: VLC: Update to 3.0.10.

* gnu/packages/patches/vlc-fix-test_libvlc_slaves.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/video.scm (vlc): Update to 3.0.10.
[source]: Remove obsolete patch.
[arguments]: Remove obsolete workarounds for libssh and fribidi
compatibility issues in 'patch-source' phase.

4 years agognu: libmicrodns: Update to 0.1.2 [security fixes].
Leo Famulari [Thu, 30 Apr 2020 22:46:56 +0000 (18:46 -0400)]
gnu: libmicrodns: Update to 0.1.2 [security fixes].

This fixes CVE-2020-6071, CVE-2020-6072, CVE-2020-6073, CVE-2020-6077,
CVE-2020-6078, and CVE-2020-6079.

* gnu/packages/dns.scm (libmicrodns): Update to 0.1.2.
[source]: Build from a tarball.
[build-system]: Use the meson-build-system.
[native-inputs]: Remove field.

4 years agognu: Add usbguard.
Brice Waegeneire [Thu, 23 Apr 2020 13:55:33 +0000 (15:55 +0200)]
gnu: Add usbguard.

* gnu/packages/hardware.scm (usbguard): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
4 years agognu: Add libqb.
Brice Waegeneire [Thu, 23 Apr 2020 13:55:32 +0000 (15:55 +0200)]
gnu: Add libqb.

* gnu/packages/hardware.scm (libqb): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
4 years agognu: umockdev: Fix test.
Brice Waegeneire [Thu, 23 Apr 2020 13:55:31 +0000 (15:55 +0200)]
gnu: umockdev: Fix test.

* gnu/packages/check.scm (umockdev)[inputs]: Remove
'gobject-introspection'.
[arguments]: Replace phase 'skip-broken-test' by 'fix-test'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
4 years agognu: Add apt-mirror.
Jean-Baptiste Note [Sun, 26 Apr 2020 09:59:48 +0000 (05:59 -0400)]
gnu: Add apt-mirror.

* gnu/packages/debian.scm (apt-mirror): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
4 years agognu: balsa: Update to 2.6.0.
Rene Saavedra [Tue, 28 Apr 2020 04:59:18 +0000 (23:59 -0500)]
gnu: balsa: Update to 2.6.0.

* gnu/packages/mail.scm (balsa): Update to 2.6.0.
[inputs]: Replace gmime-2.6 with gmime; add libical and libsecret.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
4 years agoprofiles: Mark manual database as non-substitutable.
Ludovic Courtès [Thu, 30 Apr 2020 22:40:23 +0000 (00:40 +0200)]
profiles: Mark manual database as non-substitutable.

Fixes <https://bugs.gnu.org/40381>.
Reported by pkill9 <pkill9@runbox.com>.

* guix/profiles.scm (manual-database): Pass #:substitutable? #f.

4 years agognu: emacs-toml-mode: Fix syntax error in description.
Marius Bakke [Thu, 30 Apr 2020 21:31:53 +0000 (23:31 +0200)]
gnu: emacs-toml-mode: Fix syntax error in description.

* gnu/packages/emacs-xyz.scm (emacs-toml-mode)[description]: Replace usage of
@acronym with @dfn to work around a Guile Texinfo limitation.

4 years agodoc: Bootloader Configuration: Fix an obsolete example.
Leo Famulari [Thu, 30 Apr 2020 21:17:46 +0000 (17:17 -0400)]
doc: Bootloader Configuration: Fix an obsolete example.

Reported by rawmat on #guix.

* doc/guix.texi (Bootloader Configuration): Replace 'grub-configuration' with
'bootloader-configuration'.

4 years agognu: diffoscope: Update to 143.
Vagrant Cascadian [Thu, 30 Apr 2020 18:46:30 +0000 (18:46 +0000)]
gnu: diffoscope: Update to 143.

* gnu/packages/diffoscope (diffoscope): Update to 143.
  [native-inputs]: Add openssl and python-h5py.
  [arguments] Add openssl to add-known-tools phase.
  [arguments] Remove hdf5 from add-known-tools phase, added upstream.

4 years agognu: MPD: Update to 0.21.23.
Leo Famulari [Thu, 30 Apr 2020 18:17:32 +0000 (14:17 -0400)]
gnu: MPD: Update to 0.21.23.

* gnu/packages/mpd.scm (mpd): Update to 0.21.23.

4 years agognu: libntlm: Update to 1.6 [fixes CVE-2019-17455].
Simon Josefsson [Thu, 30 Apr 2020 09:02:08 +0000 (11:02 +0200)]
gnu: libntlm: Update to 1.6 [fixes CVE-2019-17455].

* gnu/packages/gsasl.scm (libntlm): Update to 1.6.

Signed-off-by: Leo Famulari <leo@famulari.name>
4 years agognu: sbcl-osicat: Fix library path.
Pierre Neidhardt [Thu, 30 Apr 2020 14:56:44 +0000 (16:56 +0200)]
gnu: sbcl-osicat: Fix library path.

* gnu/packages/lisp-xyz.scm (sbcl-osicat)[arguments]: Replace 'cleanup phase
  to preserve the location of libosicat.so so that it can be found when
  loading the system.

4 years agognu: r-vgam: Update to 1.1-3.
Ricardo Wurmus [Thu, 30 Apr 2020 13:27:45 +0000 (15:27 +0200)]
gnu: r-vgam: Update to 1.1-3.

* gnu/packages/statistics.scm (r-vgam): Update to 1.1-3.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.

4 years agognu: r-rcpparmadillo: Update to 0.9.870.2.0.
Ricardo Wurmus [Thu, 30 Apr 2020 13:27:40 +0000 (15:27 +0200)]
gnu: r-rcpparmadillo: Update to 0.9.870.2.0.

* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.870.2.0.

4 years agognu: r-spatial: Update to 7.3-12.
Ricardo Wurmus [Thu, 30 Apr 2020 13:27:30 +0000 (15:27 +0200)]
gnu: r-spatial: Update to 7.3-12.

* gnu/packages/statistics.scm (r-spatial): Update to 7.3-12.

4 years agognu: r-nnet: Update to 7.3-14.
Ricardo Wurmus [Thu, 30 Apr 2020 13:27:24 +0000 (15:27 +0200)]
gnu: r-nnet: Update to 7.3-14.

* gnu/packages/statistics.scm (r-nnet): Update to 7.3-14.

4 years agognu: r-kernsmooth: Update to 2.23-17.
Ricardo Wurmus [Thu, 30 Apr 2020 13:27:19 +0000 (15:27 +0200)]
gnu: r-kernsmooth: Update to 2.23-17.

* gnu/packages/statistics.scm (r-kernsmooth): Update to 2.23-17.

4 years agognu: r-foreign: Update to 0.8-79.
Ricardo Wurmus [Thu, 30 Apr 2020 13:27:15 +0000 (15:27 +0200)]
gnu: r-foreign: Update to 0.8-79.

* gnu/packages/statistics.scm (r-foreign): Update to 0.8-79.

4 years agognu: r-class: Update to 7.3-17.
Ricardo Wurmus [Thu, 30 Apr 2020 13:27:09 +0000 (15:27 +0200)]
gnu: r-class: Update to 7.3-17.

* gnu/packages/statistics.scm (r-class): Update to 7.3-17.

4 years agognu: r-mass: Update to 7.3-51.6.
Ricardo Wurmus [Thu, 30 Apr 2020 13:27:01 +0000 (15:27 +0200)]
gnu: r-mass: Update to 7.3-51.6.

* gnu/packages/statistics.scm (r-mass): Update to 7.3-51.6.

4 years agognu: r-boot: Update to 1.3-25.
Ricardo Wurmus [Thu, 30 Apr 2020 13:26:52 +0000 (15:26 +0200)]
gnu: r-boot: Update to 1.3-25.

* gnu/packages/statistics.scm (r-boot): Update to 1.3-25.

4 years agognu: r-kutils: Update to 1.70.
Ricardo Wurmus [Thu, 30 Apr 2020 13:26:35 +0000 (15:26 +0200)]
gnu: r-kutils: Update to 1.70.

* gnu/packages/cran.scm (r-kutils): Update to 1.70.
[propagated-inputs]: Remove r-lavaan.

4 years agognu: r-univoutl: Update to 0.2.
Ricardo Wurmus [Thu, 30 Apr 2020 13:26:30 +0000 (15:26 +0200)]
gnu: r-univoutl: Update to 0.2.

* gnu/packages/cran.scm (r-univoutl): Update to 0.2.

4 years agognu: r-graphlayouts: Update to 0.7.0.
Ricardo Wurmus [Thu, 30 Apr 2020 13:26:24 +0000 (15:26 +0200)]
gnu: r-graphlayouts: Update to 0.7.0.

* gnu/packages/cran.scm (r-graphlayouts): Update to 0.7.0.

4 years agognu: r-systemfonts: Update to 0.2.1.
Ricardo Wurmus [Thu, 30 Apr 2020 13:26:18 +0000 (15:26 +0200)]
gnu: r-systemfonts: Update to 0.2.1.

* gnu/packages/cran.scm (r-systemfonts): Update to 0.2.1.

4 years agognu: r-ggfortify: Update to 0.4.10.
Ricardo Wurmus [Thu, 30 Apr 2020 13:26:13 +0000 (15:26 +0200)]
gnu: r-ggfortify: Update to 0.4.10.

* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.10.

4 years agognu: r-dalex: Update to 1.2.1.
Ricardo Wurmus [Thu, 30 Apr 2020 13:26:07 +0000 (15:26 +0200)]
gnu: r-dalex: Update to 1.2.1.

* gnu/packages/cran.scm (r-dalex): Update to 1.2.1.

4 years agognu: r-arm: Update to 1.11-1.
Ricardo Wurmus [Thu, 30 Apr 2020 13:26:03 +0000 (15:26 +0200)]
gnu: r-arm: Update to 1.11-1.

* gnu/packages/cran.scm (r-arm): Update to 1.11-1.

4 years agognu: r-usethis: Update to 1.6.1.
Ricardo Wurmus [Thu, 30 Apr 2020 13:25:57 +0000 (15:25 +0200)]
gnu: r-usethis: Update to 1.6.1.

* gnu/packages/cran.scm (r-usethis): Update to 1.6.1.

4 years agognu: r-rootsolve: Update to 1.8.2.1.
Ricardo Wurmus [Thu, 30 Apr 2020 13:25:50 +0000 (15:25 +0200)]
gnu: r-rootsolve: Update to 1.8.2.1.

* gnu/packages/cran.scm (r-rootsolve): Update to 1.8.2.1.

4 years agognu: r-proxy: Update to 0.4-24.
Ricardo Wurmus [Thu, 30 Apr 2020 13:25:45 +0000 (15:25 +0200)]
gnu: r-proxy: Update to 0.4-24.

* gnu/packages/cran.scm (r-proxy): Update to 0.4-24.

4 years agognu: r-pkgbuild: Update to 1.0.7.
Ricardo Wurmus [Thu, 30 Apr 2020 13:25:32 +0000 (15:25 +0200)]
gnu: r-pkgbuild: Update to 1.0.7.

* gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.7.

4 years agognu: Add miniasm.
Roel Janssen [Thu, 30 Apr 2020 13:30:16 +0000 (15:30 +0200)]
gnu: Add miniasm.

* gnu/packages/bioinformatics.scm (miniasm): New variable.

4 years agognu: Add one more missing module import.
Ricardo Wurmus [Thu, 30 Apr 2020 12:44:45 +0000 (14:44 +0200)]
gnu: Add one more missing module import.

This is a follow-up to commit 61fc72d3ac949d0c65690ee25bb1daf01f39bb42.

* gnu/packages/backup.scm: Add missing import of (gnu packages protobuf).

4 years agognu: Add missing module import.
Ricardo Wurmus [Thu, 30 Apr 2020 12:41:53 +0000 (14:41 +0200)]
gnu: Add missing module import.

This is a follow-up to commit 61fc72d3ac949d0c65690ee25bb1daf01f39bb42.

* gnu/packages/backup.scm: Add missing import of (guix build-system cmake).

4 years agognu: Add zbackup.
Nicolas Goaziou [Fri, 10 Apr 2020 12:58:47 +0000 (14:58 +0200)]
gnu: Add zbackup.

* gnu/packages/backup.scm (zbackup): New variable.

4 years agognu: python2-pysnptools: Update to 0.4.11.
Ricardo Wurmus [Thu, 30 Apr 2020 11:06:01 +0000 (13:06 +0200)]
gnu: python2-pysnptools: Update to 0.4.11.

* gnu/packages/python-xyz.scm (python2-pysnptools): Update to 0.4.11;
implement in terms of...
(python-pysnptools): ...this new variable.
[propagated-inputs]: Add python-dill, python-h5py, and python-psutil.

4 years agognu: kaldi-gstreamer-server: Fix bug.
Ricardo Wurmus [Thu, 30 Apr 2020 11:04:55 +0000 (13:04 +0200)]
gnu: kaldi-gstreamer-server: Fix bug.

* gnu/packages/machine-learning.scm (kaldi-gstreamer-server)[arguments]: Patch
master_server.py before build.

4 years agognu: kaldi-gstreamer-server: Use Tornado 6.
Ricardo Wurmus [Thu, 30 Apr 2020 11:03:59 +0000 (13:03 +0200)]
gnu: kaldi-gstreamer-server: Use Tornado 6.

* gnu/packages/machine-learning.scm (kaldi-gstreamer-server)[inputs]: Replace
python-tornado with python-tornado-6.

4 years agognu: Add python-tornado-6.
Ricardo Wurmus [Thu, 30 Apr 2020 11:03:52 +0000 (13:03 +0200)]
gnu: Add python-tornado-6.

* gnu/packages/python-web.scm (python-tornado-6): New variable.

4 years agognu: python2-warpedlmm: Fix build.
Ricardo Wurmus [Thu, 30 Apr 2020 11:00:50 +0000 (13:00 +0200)]
gnu: python2-warpedlmm: Fix build.

* gnu/packages/bioinformatics.scm (python2-warpedlmm)[propagated-inputs]: Add
python2-weave.
[arguments]: Disable tests and add "use-weave" phase.

4 years agognu: Add python2-weave.
Ricardo Wurmus [Thu, 30 Apr 2020 11:00:40 +0000 (13:00 +0200)]
gnu: Add python2-weave.

* gnu/packages/python-science.scm (python2-weave): New variable.

4 years agognu: Add r-rserve.
Eric Brown [Wed, 22 Apr 2020 11:04:59 +0000 (06:04 -0500)]
gnu: Add r-rserve.

* gnu/packages/cran.scm (r-rserve): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
4 years agognu: gnuradio: Fix runtime python environment for plugins.
Guillaume Le Vaillant [Thu, 30 Apr 2020 08:09:15 +0000 (10:09 +0200)]
gnu: gnuradio: Fix runtime python environment for plugins.

* gnu/packages/radio.scm (gnuradio)[native-search-paths]: Add PYTHONPATH.
  [native-inputs]: Move python ...
  [inputs]: ... here.

4 years agognu: linux-libre: Update to 5.4.36.
Mark H Weaver [Thu, 30 Apr 2020 02:13:56 +0000 (22:13 -0400)]
gnu: linux-libre: Update to 5.4.36.

* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.36.
(linux-libre-5.4-pristine-source): Update hash.

4 years agognu: linux-libre@5.6: Update to 5.6.8.
Mark H Weaver [Thu, 30 Apr 2020 02:13:15 +0000 (22:13 -0400)]
gnu: linux-libre@5.6: Update to 5.6.8.

* gnu/packages/linux.scm (linux-libre-5.6-version): Update to 5.6.8.
(linux-libre-5.6-pristine-source): Update hash.

4 years agognu: linux-libre@4.19: Update to 4.19.119.
Mark H Weaver [Thu, 30 Apr 2020 02:12:10 +0000 (22:12 -0400)]
gnu: linux-libre@4.19: Update to 4.19.119.

* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.119.
(linux-libre-4.19-pristine-source): Update hash.

4 years agognu: python-hacking: Update to 1.1.0.
Ricardo Wurmus [Wed, 29 Apr 2020 20:28:07 +0000 (22:28 +0200)]
gnu: python-hacking: Update to 1.1.0.

* gnu/packages/openstack.scm (python-hacking): Update to 1.1.0.
[arguments]: Add "delete-broken-test" phase.
[propagated-inputs]: Replace python-flake8-2.5 with python-flake8-2.6.

4 years agognu: python-flake8-2.5: Update to 2.6.2.
Ricardo Wurmus [Wed, 29 Apr 2020 20:24:49 +0000 (22:24 +0200)]
gnu: python-flake8-2.5: Update to 2.6.2.

* gnu/packages/python-xyz.scm (python-flake8-2.5): Update to 2.6.2; rename
it...
(python-flake8-2.6): ...to this.
[arguments]: Add phase "use-later-pycodestyles", and move "check" phase after
"install".
[propagated-inputs]: Explicitly list python-pycodestyle, python-entrypoints,
python-pyflakes-1.2, and python-mccabe.

4 years agognu: Remove python2-flake8-2.5.
Ricardo Wurmus [Wed, 29 Apr 2020 20:23:19 +0000 (22:23 +0200)]
gnu: Remove python2-flake8-2.5.

* gnu/packages/python-xyz.scm (python2-flake8-2.5): Remove variable.
(python-flake8-2.5)[properties]: Remove.

4 years agognu: Replace python-pyflakes-0.8.1 with python-pyflakes-1.2.
Ricardo Wurmus [Wed, 29 Apr 2020 20:19:25 +0000 (22:19 +0200)]
gnu: Replace python-pyflakes-0.8.1 with python-pyflakes-1.2.

* gnu/packages/python-xyz.scm (python-pyflakes-0.8.1): Remove variable.
(python-pyflakes-1.2): New variable.
* gnu/packages/openstack.scm (python-hacking)[propagated-inputs]: Replace
python-pyflakes-0.8.1 with python-pyflakes-1.2.

4 years agognu: Remove python2-pyflakes-0.8.1.
Ricardo Wurmus [Wed, 29 Apr 2020 20:16:31 +0000 (22:16 +0200)]
gnu: Remove python2-pyflakes-0.8.1.

* gnu/packages/python-xyz.scm (python2-pyflakes-0.8.1): Remove variable.

4 years agognu: Add python-cmd2.
Ricardo Wurmus [Wed, 29 Apr 2020 12:12:49 +0000 (14:12 +0200)]
gnu: Add python-cmd2.

* gnu/packages/python-xyz.scm (python-cmd2): New variable.

4 years agognu: Add python-voluptuous.
Ricardo Wurmus [Wed, 29 Apr 2020 12:12:37 +0000 (14:12 +0200)]
gnu: Add python-voluptuous.

* gnu/packages/python-xyz.scm (python-voluptuous): New variable.

4 years agognu: python-psutil: Update to 5.7.0.
Ricardo Wurmus [Tue, 28 Apr 2020 11:41:38 +0000 (13:41 +0200)]
gnu: python-psutil: Update to 5.7.0.

* gnu/packages/python-xyz.scm (python-psutil): Update to 5.7.0.

4 years agodoc: cookbook: Rename stumpwm package to current state.
Marcin Karpezo [Wed, 29 Apr 2020 13:26:11 +0000 (15:26 +0200)]
doc: cookbook: Rename stumpwm package to current state.

* doc/guix-cookbook.texi (StumpWM): Rename STUMPWM package to current state.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
4 years agognu: Add sbcl-stumpwm-pass.
Marcin Karpezo [Wed, 29 Apr 2020 12:51:33 +0000 (14:51 +0200)]
gnu: Add sbcl-stumpwm-pass.

* gnu/packages/wm.scm (sbcl-stumpwm-pass): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
4 years agognu: Magic Wormhole: Update to 0.12.0.
Leo Famulari [Wed, 29 Apr 2020 20:15:40 +0000 (16:15 -0400)]
gnu: Magic Wormhole: Update to 0.12.0.

* gnu/packages/magic-wormhole.scm (magic-wormhole): Update to 0.12.0.

4 years agognu: magic-wormhole-transit-relay: Update to 0.2.1.
Leo Famulari [Wed, 29 Apr 2020 20:15:19 +0000 (16:15 -0400)]
gnu: magic-wormhole-transit-relay: Update to 0.2.1.

* gnu/packages/magic-wormhole.scm (magic-wormhole-transit-relay): Update to
0.2.1.