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HCoop / jackhill / guix / guix.git / history

[jackhill/guix/guix.git] / gnu / packages / bioinformatics.scm

2018-09-05	Ricardo Wurmus	gnu: r-scater: Update to 1.8.4.	blob \| commitdiff \| raw
2018-09-05	Ricardo Wurmus	gnu: r-hdf5array: Update to 1.8.1.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-ggbio: Update to 1.28.5.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-biovizbase: Update to 1.28.2.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-keggrest: Update to 1.20.1.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-edaseq: Update to 2.14.1.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-seurat: Update to 2.3.4.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-msnbase: Update to 2.6.3.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-maldiquant: Update to 1.18.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-seqminer: Update to 6.1.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-genomicfeatures: Update to 1.32.2.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-rtracklayer: Update to 1.40.6.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-delayedarray: Update to 0.6.5.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-rsamtools: Update to 1.32.3.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-biocparallel: Update to 1.14.2.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-genomicranges: Update to 1.32.6.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-limma: Update to 3.36.3.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-variantannotation: Update to 1.26.1.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-edger: Update to 3.22.3.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-iranges: Update to 2.14.11.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-biocviews: Update to 1.48.3.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: r-annotationforge: Update to 1.22.2.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: python-pybigwig: Update to 0.3.12.	blob \| commitdiff \| raw \| diff to current
2018-09-05	Ricardo Wurmus	gnu: libbigwig: Update to 0.4.2.	blob \| commitdiff \| raw \| diff to current
2018-09-03	Marius Bakke	Merge branch 'security-updates'	blob \| commitdiff \| raw \| diff to current
2018-09-03	Efraim Flashner	gnu: jellyfish: Update to 2.2.10.	blob \| commitdiff \| raw \| diff to current
2018-08-29	pimi	gnu: Add gffcompare.	blob \| commitdiff \| raw \| diff to current
2018-08-29	Ricardo Wurmus	gnu: Add python-scanpy.	blob \| commitdiff \| raw \| diff to current
2018-08-24	Ricardo Wurmus	gnu: Add find-circ.	blob \| commitdiff \| raw \| diff to current
2018-08-16	Marius Bakke	Merge branch 'master' into staging	blob \| commitdiff \| raw \| diff to current
2018-08-14	Ricardo Wurmus	gnu: Add gffread.	blob \| commitdiff \| raw \| diff to current
2018-08-14	Ricardo Wurmus	gnu: Add r-circus.	blob \| commitdiff \| raw \| diff to current
2018-08-11	Tobias Geerinckx...	Migrate search.cpan.org home pages to metacpan.org.	blob \| commitdiff \| raw \| diff to current
2018-08-06	Marius Bakke	Merge branch 'master' into staging	blob \| commitdiff \| raw \| diff to current
2018-08-03	Ricardo Wurmus	gnu: pigx-scrnaseq: Update to 0.0.7.	blob \| commitdiff \| raw \| diff to current
2018-07-30	Marius Bakke	Merge branch 'master' into staging	blob \| commitdiff \| raw \| diff to current
2018-07-29	Ben Woodcroft	gnu: taxtastic: Add missing propagated-inputs.	blob \| commitdiff \| raw \| diff to current
2018-07-29	Ben Woodcroft	gnu: python-dendropy: Update to 4.4.0.	blob \| commitdiff \| raw \| diff to current
2018-07-29	Ben Woodcroft	gnu: Add python-fastalite.	blob \| commitdiff \| raw \| diff to current
2018-07-28	Marius Bakke	Merge branch 'master' into staging	blob \| commitdiff \| raw \| diff to current
2018-07-27	Ricardo Wurmus	gnu: pigx-scrnaseq: Disable another expensive test.	blob \| commitdiff \| raw \| diff to current
2018-07-27	Ricardo Wurmus	gnu: Add snakemake-4.	blob \| commitdiff \| raw \| diff to current
2018-07-26	Gábor Boskovits	gnu: java-picard: Fix manifest.	blob \| commitdiff \| raw \| diff to current
2018-07-12	Marius Bakke	Merge branch 'staging'	blob \| commitdiff \| raw \| diff to current
2018-07-09	Ricardo Wurmus	gnu: macs: Update to 2.1.1.20160309.	blob \| commitdiff \| raw \| diff to current
2018-07-08	Marius Bakke	Merge branch 'master' into staging	blob \| commitdiff \| raw \| diff to current
2018-07-06	Ludovic Courtès	Merge branch 'version-0.15.0'	blob \| commitdiff \| raw \| diff to current
2018-07-05	Ricardo Wurmus	gnu: pigx: Update to 0.0.3.	blob \| commitdiff \| raw \| diff to current
2018-07-05	Ricardo Wurmus	gnu: r-getopt: Move from bioinformatics to cran.	blob \| commitdiff \| raw \| diff to current
2018-07-04	Ricardo Wurmus	gnu: pigx-scrnaseq: Update to 0.0.6.	blob \| commitdiff \| raw \| diff to current
2018-07-03	Ricardo Wurmus	gnu: Add r-loomr.	blob \| commitdiff \| raw \| diff to current
2018-07-03	Ricardo Wurmus	gnu: pigx-bsseq: Update to 0.0.10.	blob \| commitdiff \| raw \| diff to current
2018-07-03	Ricardo Wurmus	gnu: pigx-rnaseq: Update to 0.0.4.	blob \| commitdiff \| raw \| diff to current
2018-07-03	Ricardo Wurmus	gnu: pigx-chipseq: Update to 0.0.20.	blob \| commitdiff \| raw \| diff to current
2018-06-26	Marius Bakke	Merge branch 'master' into staging	blob \| commitdiff \| raw \| diff to current
2018-06-22	Tobias Geerinckx...	gnu: Use more HTTPS.	blob \| commitdiff \| raw \| diff to current
2018-06-22	Ricardo Wurmus	gnu: pigx-chipseq: Update to 0.0.17.	blob \| commitdiff \| raw \| diff to current
2018-06-22	Ludovic Courtès	Do not record store file name in bioinformatics.scm.	blob \| commitdiff \| raw \| diff to current
2018-06-21	Marius Bakke	Merge branch 'master' into staging	blob \| commitdiff \| raw \| diff to current
2018-06-21	Ricardo Wurmus	gnu: r-complexheatmap: Update to 1.18.1.	blob \| commitdiff \| raw \| diff to current
2018-06-21	Ricardo Wurmus	gnu: r-delayedarray: Update to 0.6.1.	blob \| commitdiff \| raw \| diff to current
2018-06-21	Ricardo Wurmus	gnu: r-optparse: Update to 1.6.0.	blob \| commitdiff \| raw \| diff to current
2018-06-21	Ricardo Wurmus	gnu: r-biocviews: Update to 1.48.2.	blob \| commitdiff \| raw \| diff to current
2018-06-18	Marius Bakke	Merge branch 'master' into staging	blob \| commitdiff \| raw \| diff to current
2018-06-16	Ricardo Wurmus	gnu: pigx-chipseq: Update to 0.0.16.	blob \| commitdiff \| raw \| diff to current
2018-06-14	Ricardo Wurmus	gnu: Add minimap2.	blob \| commitdiff \| raw \| diff to current
2018-06-14	Ricardo Wurmus	gnu: pigx-bsseq: Update to 0.0.9.	blob \| commitdiff \| raw \| diff to current
2018-06-13	Ricardo Wurmus	gnu: pigx-scrnaseq: Update to 0.0.5.	blob \| commitdiff \| raw \| diff to current
2018-06-13	Ricardo Wurmus	gnu: r-seurat: Update to 2.3.2.	blob \| commitdiff \| raw \| diff to current
2018-06-13	Ricardo Wurmus	gnu: r-s4vectors: Update to 0.18.3.	blob \| commitdiff \| raw \| diff to current
2018-06-13	Ricardo Wurmus	gnu: r-biocviews: Update to 1.48.1.	blob \| commitdiff \| raw \| diff to current
2018-06-11	Marius Bakke	Merge branch 'master' into staging	blob \| commitdiff \| raw \| diff to current
2018-06-08	Ricardo Wurmus	gnu: rcas-web: Update to 0.0.5.	blob \| commitdiff \| raw \| diff to current
2018-06-07	Ricardo Wurmus	gnu: r-rcas: Update to 1.6.0.	blob \| commitdiff \| raw \| diff to current
2018-06-07	Ricardo Wurmus	gnu: star: Update to 2.6.0c.	blob \| commitdiff \| raw \| diff to current
2018-06-06	Ricardo Wurmus	Merge branch 'master' into core-updates	blob \| commitdiff \| raw \| diff to current
2018-06-05	Ricardo Wurmus	Merge branch 'master' into core-updates	blob \| commitdiff \| raw \| diff to current
2018-06-05	Ricardo Wurmus	gnu: Add sjcount.	blob \| commitdiff \| raw \| diff to current
2018-06-05	Ricardo Wurmus	gnu: dropseq-tools: Remove failing phase.	blob \| commitdiff \| raw \| diff to current
2018-06-05	Ricardo Wurmus	gnu: pigx-scrnaseq: Use only one variant of Picard.	blob \| commitdiff \| raw \| diff to current
2018-06-05	Ricardo Wurmus	gnu: java-picard: Delete failing build phase.	blob \| commitdiff \| raw \| diff to current
2018-06-05	Ricardo Wurmus	gnu: java-picard-1.113: Delete failing build phase.	blob \| commitdiff \| raw \| diff to current
2018-06-05	Ricardo Wurmus	gnu: java-picard-2.10.3: Delete failing build phase.	blob \| commitdiff \| raw \| diff to current
2018-06-05	Ricardo Wurmus	Merge branch 'master' into core-updates	blob \| commitdiff \| raw \| diff to current
2018-06-05	Ricardo Wurmus	gnu: r-rtracklayer: Update to 1.40.3.	blob \| commitdiff \| raw \| diff to current
2018-06-05	Ricardo Wurmus	gnu: r-methylkit: Update to 1.6.1.	blob \| commitdiff \| raw \| diff to current
2018-06-05	Ricardo Wurmus	gnu: r-bamsignals: Update to 1.12.1.	blob \| commitdiff \| raw \| diff to current
2018-06-05	Ricardo Wurmus	Merge branch 'master' into core-updates	blob \| commitdiff \| raw \| diff to current
2018-06-04	Ricardo Wurmus	Merge branch 'master' into core-updates	blob \| commitdiff \| raw \| diff to current
2018-06-03	Mark H Weaver	Merge branch 'master' into core-updates	blob \| commitdiff \| raw \| diff to current
2018-06-02	Ricardo Wurmus	Merge branch 'master' into core-updates	blob \| commitdiff \| raw \| diff to current
2018-06-02	Ricardo Wurmus	gnu: r-scater: Update to 1.8.0.	blob \| commitdiff \| raw \| diff to current
2018-06-02	Ricardo Wurmus	gnu: r-scran: Update to 1.8.2.	blob \| commitdiff \| raw \| diff to current
2018-06-02	Ricardo Wurmus	gnu: r-delayedmatrixstats: Update to 1.2.0.	blob \| commitdiff \| raw \| diff to current
2018-06-02	Ricardo Wurmus	gnu: r-singlecellexperiment: Update to 1.2.0.	blob \| commitdiff \| raw \| diff to current
2018-06-02	Ricardo Wurmus	gnu: r-beachmat: Update to 1.2.1.	blob \| commitdiff \| raw \| diff to current
2018-06-02	Ricardo Wurmus	gnu: r-rhdf5lib: Update to 1.2.1.	blob \| commitdiff \| raw \| diff to current
2018-06-02	Ricardo Wurmus	gnu: r-hdf5array: Update to 1.8.0.	blob \| commitdiff \| raw \| diff to current
2018-06-02	Ricardo Wurmus	gnu: r-qvalue: Update to 2.12.0.	blob \| commitdiff \| raw \| diff to current
2018-06-02	Ricardo Wurmus	gnu: r-hitc: Update to 1.24.0.	blob \| commitdiff \| raw \| diff to current
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jackhill's copy of GNU Guix: https://guix.gnu.org/

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