;;; Copyright © 2020 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2020 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2020 Edouard Klein <edk@beaver-labs.com>
+;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
+;;; Copyright © 2020 Tanguy Le Carrour <tanguy@bioneland.org>
;;;
;;; This file is part of GNU Guix.
;;;
#:use-module (gnu packages python-web)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages web)
+ #:use-module (gnu packages xml)
#:use-module (guix utils)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
interactions, which will update them to correspond to the new API.")
(license license:expat)))
+(define-public python-pytest-ordering
+ (package
+ (name "python-pytest-ordering")
+ (version "0.6")
+ (source
+ (origin
+ ;; No tests in the PyPI tarball.
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/ftobia/pytest-ordering")
+ (commit version)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "14msj5gyqza0gk3x7h1ivmjrwza82v84cj7jx3ks0fw9lpin7pjq"))))
+ (build-system python-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (add-installed-pythonpath inputs outputs)
+ (invoke "pytest" "-vv" "-k"
+ ;; This test fails because of a type mismatch of an
+ ;; argument passed to @code{pytest.main}.
+ "not test_run_marker_registered"))))))
+ (native-inputs
+ `(("python-pytest" ,python-pytest)))
+ (home-page "https://github.com/ftobia/pytest-ordering")
+ (synopsis "Pytest plugin to run your tests in a specific order")
+ (description
+ "This plugin defines Pytest markers to ensure that some tests, or groups
+of tests run in a specific order.")
+ (license license:expat)))
+
+(define-public python-pytest-arraydiff
+ (package
+ (name "python-pytest-arraydiff")
+ (version "0.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "pytest-arraydiff" version))
+ (sha256
+ (base32 "05bcvhh2ycxa35znl8b3l9vkcmx7vwm5c3fpakbpw46c7vsn4bfy"))))
+ (build-system python-build-system)
+ (arguments
+ ;; Tests require python-astropy, which itself requires this package.
+ ;; Disable tests to avoid the circular dependency problem.
+ '(#:tests? #f))
+ (propagated-inputs
+ `(("python-numpy" ,python-numpy)
+ ("python-six" ,python-six)))
+ (home-page "https://github.com/astropy/pytest-arraydiff")
+ (synopsis "Pytest plugin to help with comparing array output from tests")
+ (description
+ "This is a py.test plugin to facilitate the generation and comparison of
+data arrays produced during tests, in particular in cases where the arrays
+are too large to conveniently hard-code them in the tests.")
+ (license license:bsd-3)))
+
+(define-public python-pytest-doctestplus
+ (package
+ (name "python-pytest-doctestplus")
+ (version "0.7.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "pytest-doctestplus" version))
+ (sha256
+ (base32 "1ai9kvd7xbq2jg2h8gmkb8lqzyrxvdh4zg3vxndg149iwd1hyi7d"))))
+ (build-system python-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ ;; Make the installed plugin discoverable by Pytest.
+ (add-installed-pythonpath inputs outputs)
+ (invoke "pytest" "-vv"))))))
+ (native-inputs
+ `(("python-pytest" ,python-pytest)))
+ (home-page "https://github.com/astropy/pytest-doctestplus")
+ (synopsis "Pytest plugin with advanced doctest features")
+ (description
+ "This package contains a plugin for the Pytest framework that provides
+advanced doctest support and enables the testing of reStructuredText files.")
+ (license license:bsd-3)))
+
+(define-public python-pytest-filter-subpackage
+ (package
+ (name "python-pytest-filter-subpackage")
+ (version "0.1.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "pytest-filter-subpackage" version))
+ (sha256
+ (base32 "1s4s2kd31yc65rfvl4xhy8xx806xhy59kc7668h6b6wq88xgrn5p"))))
+ (build-system python-build-system)
+ (arguments
+ '(;; One test is failing. There's an issue reported upstream. See
+ ;; https://github.com/astropy/pytest-filter-subpackage/issues/3.
+ ;; Disable it for now.
+ #:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ ;; Make the installed plugin discoverable by Pytest.
+ (add-installed-pythonpath inputs outputs)
+ (invoke "pytest" "-vv" "-k" "not test_with_rst"))))))
+ (native-inputs
+ `(("python-pytest" ,python-pytest)
+ ("python-pytest-cov" ,python-pytest-cov)
+ ("python-pytest-doctestplus"
+ ,python-pytest-doctestplus)))
+ (home-page "https://github.com/astropy/pytest-filter-subpackage")
+ (synopsis "Pytest plugin for filtering based on sub-packages")
+ (description
+ "This package contains a simple plugin for the pytest framework that
+provides a shortcut to testing all code and documentation for a given
+sub-package.")
+ (license license:bsd-3)))
+
+(define-public python-pytest-openfiles
+ (package
+ (name "python-pytest-openfiles")
+ (version "0.5.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "pytest-openfiles" version))
+ (sha256
+ (base32 "0n0a7fdc9m86360y96l23fvdmd6rw04bl6h5xqgl9qxfv08jk70p"))))
+ (build-system python-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ ;; Make the installed plugin discoverable by Pytest.
+ (add-installed-pythonpath inputs outputs)
+ (invoke "pytest" "-vv"))))))
+ (native-inputs
+ `(("python-setuptools-scm" ,python-setuptools-scm)
+ ("python-pytest" ,python-pytest)))
+ (propagated-inputs
+ `(("python-psutil" ,python-psutil)))
+ (home-page "https://github.com/astropy/pytest-openfiles")
+ (synopsis "Pytest plugin for detecting inadvertent open file handles")
+ (description
+ "This package provides a plugin for the pytest framework that allows
+developers to detect whether any file handles or other file-like objects
+were inadvertently left open at the end of a unit test.")
+ (license license:bsd-3)))
+
+(define-public python-pytest-remotedata
+ (package
+ (name "python-pytest-remotedata")
+ (version "0.3.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "pytest-remotedata" version))
+ (sha256
+ (base32 "1h6g6shib6z07azf12rnsa053470ggbd7hy3bnbw8nf3nza5h372"))))
+ (build-system python-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ ;; Make the installed plugin discoverable by Pytest.
+ (add-installed-pythonpath inputs outputs)
+ (invoke "pytest" "-vv" "-k"
+ (string-append
+ ;; These tests require internet access. Disable them.
+ "not test_default_behavior"
+ " and not test_strict_with_decorator")))))))
+ (native-inputs
+ `(("python-pytest" ,python-pytest)))
+ (propagated-inputs
+ `(("python-six" ,python-six)))
+ (home-page "https://github.com/astropy/pytest-remotedata")
+ (synopsis "Pytest plugin for controlling remote data access")
+ (description
+ "This package provides a plugin for the Pytest framework that allows
+developers to control unit tests that require access to data from the
+internet.")
+ (license license:bsd-3)))
+
+(define-public python-pytest-mpl
+ (package
+ (name "python-pytest-mpl")
+ (version "0.11")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "pytest-mpl" version))
+ (sha256
+ (base32 "1km202c1s5kcn52fx0266p06qb34va3warcby594dh6vixxa9i96"))))
+ (build-system python-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda _
+ (invoke "pytest" "-vv"))))))
+ (native-inputs
+ `(("python-pytest" ,python-pytest)))
+ (propagated-inputs
+ `(("python-matplotlib" ,python-matplotlib)
+ ("python-pillow" ,python-pillow)))
+ (home-page "https://github.com/matplotlib/pytest-mpl")
+ (synopsis "Pytest plugin to help with testing figures output from Matplotlib")
+ (description
+ "This is a plugin to facilitate image comparison for Matplotlib figures
+in Pytest.")
+ (license license:bsd-3)))
+
+(define-public python-covdefaults
+ (package
+ (name "python-covdefaults")
+ (version "1.1.0")
+ (source
+ (origin
+ ;; The PyPI tarball does not include tests.
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/asottile/covdefaults")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "11a24c0wzv01n55fy4kdpnyqna4m9k0mp58kmhiaks34xw4k37hq"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda _
+ (invoke "pytest" "-vv"))))))
+ (native-inputs
+ `(("python-coverage" ,python-coverage)
+ ("python-pytest" ,python-pytest)))
+ (home-page "https://github.com/asottile/covdefaults")
+ (synopsis "Coverage plugin to provide opinionated default settings")
+ (description
+ "Covdefaults is a coverage plugin to provide opinionated default
+ settings.")
+ (license license:expat)))
+
(define-public python-pytest-vcr
;; This commit fixes integration with pytest-5
(let ((commit "4d6c7b3e379a6a7cba0b8f9d20b704dc976e9f05")
of the project to ensure it renders properly.")
(license license:expat)))
+(define-public python-pytest-trio
+ (package
+ (name "python-pytest-trio")
+ (version "0.6.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "pytest-trio" version))
+ (sha256
+ (base32 "1zm8didm9h5jkqhghl9bvqs7kr7sjci282c7grhk6yhpzn8a9w4v"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (add-installed-pythonpath inputs outputs)
+ (invoke "pytest" "-W" "error" "-ra" "-v" "--pyargs"
+ "pytest_trio" "--verbose" "--cov"))))))
+ (native-inputs
+ `(("python-hypothesis" ,python-hypothesis)
+ ("python-pytest" ,python-pytest)
+ ("python-pytest-cov" ,python-pytest-cov)))
+ (propagated-inputs
+ `(("python-trio" ,python-trio)))
+ (home-page "https://github.com/python-trio/pytest-trio")
+ (synopsis "Pytest plugin for trio")
+ (description
+ "This is a pytest plugin to help you test projects that use Trio, a
+friendly library for concurrency and async I/O in Python.")
+ ;; Either license applies.
+ (license (list license:expat license:asl2.0))))
+
(define-public python-pytest-flake8
(package
(name "python-pytest-flake8")
rounds that are calibrated to the chosen timer.")
(license license:bsd-2)))
+(define-public python-pytest-services
+ (package
+ (name "python-pytest-services")
+ (version "1.3.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "pytest-services" version))
+ (sha256
+ (base32
+ "0b2zfv04w6m3gp2v44ifdhx22vcji069qnn95ry3zcyxib7cjnq3"))))
+ (build-system python-build-system)
+ (arguments '(#:tests? #f)) ; Tests not included in release tarball.
+ (propagated-inputs
+ `(("python-psutil" ,python-psutil)
+ ("python-requests" ,python-requests)))
+ (native-inputs
+ `(("python-pytest" ,python-pytest)))
+ (home-page "https://github.com/pytest-dev/pytest-services")
+ (synopsis "Services plugin for pytest testing framework")
+ (description
+ "This plugin provides a set of fixtures and utility functions to start
+service processes for your tests with pytest.")
+ (license license:expat)))
+
+(define-public python-pytest-aiohttp
+ (package
+ (name "python-pytest-aiohttp")
+ (version "0.3.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "pytest-aiohttp" version))
+ (sha256
+ (base32
+ "0kx4mbs9bflycd8x9af0idcjhdgnzri3nw1qb0vpfyb3751qaaf9"))))
+ (build-system python-build-system)
+ (native-inputs
+ `(("python-pytest" ,python-pytest)))
+ (propagated-inputs
+ `(("python-aiohttp" ,python-aiohttp)))
+ (home-page "https://github.com/aio-libs/pytest-aiohttp/")
+ (synopsis "Pytest plugin for aiohttp support")
+ (description "This package provides a pytest plugin for aiohttp support.")
+ (license license:asl2.0)))
+
+(define-public python-nbval
+ (package
+ (name "python-nbval")
+ (version "0.9.5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "nbval" version))
+ (sha256
+ (base32 "1xh2p7g5s5g06caaraf3dsz69bpj7dgw2h3ss67kci789aspnwp8"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-before 'check 'fix-test
+ (lambda _
+ ;; This test fails because of a mismatch in the output of LaTeX
+ ;; equation environments. Seems OK to skip.
+ (delete-file "tests/ipynb-test-samples/test-latex-pass-correctouput.ipynb")
+ #t))
+ (replace 'check
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (add-installed-pythonpath inputs outputs)
+ (invoke "pytest" "-vv" "-k"
+ (string-append
+ ;; This only works with Pytest < 5.
+ "not nbdime_reporter"
+ ;; https://github.com/computationalmodelling/nbval/pull/148.
+ " and not test_timeouts")))))))
+ (native-inputs
+ `(("python-pytest" ,python-pytest)
+ ("python-pytest-cov" ,python-pytest-cov)
+ ("python-sympy" ,python-sympy)))
+ (propagated-inputs
+ `(("python-ipykernel" ,python-ipykernel)
+ ("python-jupyter-client" ,python-jupyter-client)
+ ("python-nbformat" ,python-nbformat)
+ ("python-six" ,python-six)))
+ (home-page "https://github.com/computationalmodelling/nbval")
+ (synopsis "Pytest plugin to validate Jupyter notebooks")
+ (description
+ "This plugin adds functionality to Pytest to recognise and collect Jupyter
+notebooks. The intended purpose of the tests is to determine whether execution
+of the stored inputs match the stored outputs of the @file{.ipynb} file. Whilst
+also ensuring that the notebooks are running without errors.")
+ (license license:bsd-3)))
+
(define-public python-pytest-flask
(package
(name "python-pytest-flask")
"This pytest plugin provides fixtures to simplify Flask app testing.")
(license license:expat)))
+(define-public python-pytest-env
+ (package
+ (name "python-pytest-env")
+ (version "0.6.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "pytest-env" version))
+ (sha256
+ (base32 "1hl0ln0cicdid4qjk7mv90lw9xkb0v71dlj7q7rn89vzxxm9b53y"))))
+ (build-system python-build-system)
+ (native-inputs
+ `(("python-pytest" ,python-pytest)))
+ (home-page "https://github.com/MobileDynasty/pytest-env")
+ (synopsis "Pytest plugin that allows you to add environment variables")
+ (description
+ "This is a @code{py.test} plugin that enables you to set environment
+variables in the @file{pytest.ini} file.")
+ (license license:expat)))
+
(define-public python-codacy-coverage
(package
(name "python-codacy-coverage")
(description "This package provides a library for replying fake data to
Python software under test, when they make an HTTP query.")
(license license:asl2.0)))
+
+(define-public python-atpublic
+ (package
+ (name "python-atpublic")
+ (version "1.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "atpublic" version))
+ (sha256
+ (base32
+ "0i3sbxkdlbb4560rrlmwwd5y4ps7k73lp4d8wnmd7ag9k426gjkx"))))
+ (build-system python-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (add-before 'build 'enable-c-implementation
+ (lambda _
+ (setenv "ATPUBLIC_BUILD_EXTENSION" "yes")
+ #t))
+ (replace 'check
+ (lambda _
+ (invoke "python" "-m" "nose2" "-v"))))))
+ (native-inputs
+ `(("python-nose2" ,python-nose2)))
+ (home-page "https://public.readthedocs.io/")
+ (synopsis "@code{@@public} decorator for populating @code{__all__}")
+ (description
+ "This Python module adds a @code{@@public} decorator and function which
+populates a module's @code{__all__} and optionally the module globals. With
+it, the declaration of a name's public export semantics are not separated from
+the implementation of that name.")
+ (license (list license:asl2.0
+ license:lgpl3)))) ; only for setup_helpers.py
+
+(define-public python-mypy-extensions
+ (package
+ (name "python-mypy-extensions")
+ (version "0.4.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "mypy_extensions" version))
+ (sha256
+ (base32
+ "1a04qsk8hd1lqns8w1j7cr0vmvbhg450di5k1i16kqxkbf7q30id"))))
+ (build-system python-build-system)
+ (arguments `(#:tests? #f)); no tests
+ (home-page "https://github.com/python/mypy_extensions")
+ (synopsis "Experimental extensions for MyPy")
+ (description "The @code{python-mypy-extensions} module defines
+experimental extensions to the standard @code{typing} module that are
+supported by the MyPy typechecker.")
+ (license license:expat)))
+
+(define-public python-mypy
+ (package
+ (name "python-mypy")
+ (version "0.782")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "mypy" version))
+ (sha256
+ (base32
+ "030kn709515452n6gy2i1d9fg6fyrkmdz228lfpmbslybsld9xzg"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda _
+ (invoke "./runtests.py")
+ #t)))))
+ (native-inputs
+ `(("python-attrs" ,python-attrs)
+ ("python-flake8" ,python-flake8)
+ ("python-flake8-bugbear" ,python-flake8-bugbear)
+ ("python-flake8-pyi" ,python-flake8-pyi)
+ ("python-importlib-metadata" ,python-importlib-metadata)
+ ("python-lxml" ,python-lxml)
+ ("python-psutil" ,python-psutil)
+ ("python-py" ,python-py)
+ ("python-pytest" ,python-pytest)
+ ("python-pytest-cov" ,python-pytest-cov)
+ ("python-pytest-forked" ,python-pytest-forked)
+ ("python-pytest-xdist" ,python-pytest-xdist)
+ ("python-virtualenv" ,python-virtualenv)))
+ (propagated-inputs
+ `(("python-mypy-extensions" ,python-mypy-extensions)
+ ("python-typing-extensions" ,python-typing-extensions)
+ ("python-typed-ast" ,python-typed-ast)))
+ (home-page "http://www.mypy-lang.org/")
+ (synopsis "Static type checker for Python")
+ (description "Mypy is an optional static type checker for Python that aims
+to combine the benefits of dynamic (or 'duck') typing and static typing. Mypy combines
+the expressive power and convenience of Python with a powerful type system and
+compile-time type checking. Mypy type checks standard Python programs; run them using
+any Python VM with basically no runtime overhead.")
+ ;; Most of the code is under MIT license; Some files are under Python Software
+ ;; Foundation License version 2: stdlib-samples/*, mypyc/lib-rt/pythonsupport.h and
+ ;; mypyc/lib-rt/getargs.c
+ (license (list license:expat license:psfl))))
HCoop / jackhill / guix / guix.git / blobdiff