gnu: podofo: Add patch to fix build.
[jackhill/guix/guix.git] / gnu / local.mk
index 278afbb..4a63faa 100644 (file)
@@ -19,6 +19,7 @@
 # Copyright © 2018 Amirouche Boubekki <amirouche@hypermove.net>
 # Copyright © 2018 Oleg Pykhalov <go.wigust@gmail.com>
 # Copyright © 2018 Stefan Stefanović <stefanx2ovic@gmail.com>
+# Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com>
 #
 # This file is part of GNU Guix.
 #
@@ -60,6 +61,7 @@ GNU_SYSTEM_MODULES =                          \
   %D%/packages/android.scm                     \
   %D%/packages/animation.scm                   \
   %D%/packages/anthy.scm                       \
+  %D%/packages/antivirus.scm                   \
   %D%/packages/apl.scm                         \
   %D%/packages/apr.scm                         \
   %D%/packages/aspell.scm                      \
@@ -77,6 +79,7 @@ GNU_SYSTEM_MODULES =                          \
   %D%/packages/backup.scm                      \
   %D%/packages/base.scm                                \
   %D%/packages/bash.scm                                \
+  %D%/packages/batik.scm                       \
   %D%/packages/bdw-gc.scm                      \
   %D%/packages/benchmark.scm                   \
   %D%/packages/bioconductor.scm                        \
@@ -135,6 +138,7 @@ GNU_SYSTEM_MODULES =                                \
   %D%/packages/display-managers.scm            \
   %D%/packages/django.scm                      \
   %D%/packages/djvu.scm                                \
+  %D%/packages/dlang.scm                       \
   %D%/packages/dns.scm                         \
   %D%/packages/docbook.scm                     \
   %D%/packages/docker.scm                      \
@@ -232,6 +236,7 @@ GNU_SYSTEM_MODULES =                                \
   %D%/packages/imagemagick.scm                 \
   %D%/packages/inklingreader.scm               \
   %D%/packages/inkscape.scm                    \
+  %D%/packages/ipfs.scm                        \
   %D%/packages/irc.scm                         \
   %D%/packages/iso-codes.scm                   \
   %D%/packages/java.scm                                \
@@ -245,7 +250,6 @@ GNU_SYSTEM_MODULES =                                \
   %D%/packages/key-mon.scm                     \
   %D%/packages/kodi.scm                                \
   %D%/packages/language.scm                    \
-  %D%/packages/ldc.scm                         \
   %D%/packages/lego.scm                                \
   %D%/packages/less.scm                                \
   %D%/packages/lesstif.scm                     \
@@ -529,7 +533,6 @@ GNU_SYSTEM_MODULES =                                \
   %D%/build/vm.scm                             \
                                                \
   %D%/tests.scm                                        \
-  %D%/tests/admin.scm                          \
   %D%/tests/audio.scm                          \
   %D%/tests/base.scm                           \
   %D%/tests/databases.scm                      \
@@ -592,25 +595,32 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/awesome-reproducible-png.patch          \
   %D%/packages/patches/azr3.patch                              \
   %D%/packages/patches/bash-completion-directories.patch       \
+  %D%/packages/patches/bastet-change-source-of-unordered_set.patch     \
   %D%/packages/patches/bazaar-CVE-2017-14176.patch             \
   %D%/packages/patches/beignet-correct-file-names.patch                \
-  %D%/packages/patches/binutils-aarch64-symbol-relocation.patch        \
   %D%/packages/patches/binutils-loongson-workaround.patch      \
   %D%/packages/patches/blast+-fix-makefile.patch               \
   %D%/packages/patches/boost-fix-icu-build.patch               \
+  %D%/packages/patches/borg-respect-storage-quota.patch                \
   %D%/packages/patches/byobu-writable-status.patch             \
   %D%/packages/patches/cairo-CVE-2016-9082.patch                       \
+  %D%/packages/patches/cairo-setjmp-wrapper.patch              \
   %D%/packages/patches/calibre-no-updates-dialog.patch         \
   %D%/packages/patches/calibre-use-packaged-feedparser.patch   \
+  %D%/packages/patches/casync-renameat2-declaration.patch      \
   %D%/packages/patches/catdoc-CVE-2017-11110.patch             \
   %D%/packages/patches/cdparanoia-fpic.patch                   \
   %D%/packages/patches/cdrtools-3.01-mkisofs-isoinfo.patch     \
+  %D%/packages/patches/ceph-detect-rocksdb.patch               \
   %D%/packages/patches/ceph-disable-cpu-optimizations.patch    \
-  %D%/packages/patches/ceph-rocksdb-compat.patch               \
   %D%/packages/patches/ceph-skip-collect-sys-info-test.patch   \
   %D%/packages/patches/ceph-skip-unittest_blockdev.patch       \
+  %D%/packages/patches/ceph-volume-respect-PATH.patch          \
   %D%/packages/patches/chmlib-inttypes.patch                   \
+  %D%/packages/patches/clamav-config-llvm-libs.patch           \
+  %D%/packages/patches/clamav-system-tomsfastmath.patch                \
   %D%/packages/patches/clang-3.5-libc-search-path.patch                \
+  %D%/packages/patches/clang-3.5-libsanitizer-ustat-fix.patch  \
   %D%/packages/patches/clang-3.8-libc-search-path.patch                \
   %D%/packages/patches/clang-6.0-libc-search-path.patch                \
   %D%/packages/patches/clang-runtime-asan-build-fixes.patch    \
@@ -619,7 +629,6 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/clementine-fix-sqlite.patch             \
   %D%/packages/patches/clementine-remove-crypto++-dependency.patch     \
   %D%/packages/patches/clementine-use-openssl.patch            \
-  %D%/packages/patches/clisp-glibc-2.26.patch                  \
   %D%/packages/patches/clisp-remove-failing-test.patch         \
   %D%/packages/patches/clucene-pkgconfig.patch                 \
   %D%/packages/patches/clx-remove-demo.patch                   \
@@ -633,7 +642,6 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/cracklib-fix-buffer-overflow.patch      \
   %D%/packages/patches/crawl-upgrade-saves.patch               \
   %D%/packages/patches/crda-optional-gcrypt.patch              \
-  %D%/packages/patches/crossmap-allow-system-pysam.patch       \
   %D%/packages/patches/clucene-contribs-lib.patch               \
   %D%/packages/patches/cube-nocheck.patch                      \
   %D%/packages/patches/cursynth-wave-rand.patch                        \
@@ -642,7 +650,6 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/datamash-arm-tests.patch                        \
   %D%/packages/patches/dbus-helper-search-path.patch           \
   %D%/packages/patches/deja-dup-use-ref-keyword-for-iter.patch \
-  %D%/packages/patches/delly-use-system-libraries.patch                \
   %D%/packages/patches/dfu-programmer-fix-libusb.patch         \
   %D%/packages/patches/diffutils-gets-undeclared.patch         \
   %D%/packages/patches/diffutils-getopt.patch                  \
@@ -650,7 +657,6 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/doc++-include-directives.patch          \
   %D%/packages/patches/doc++-segfault-fix.patch                        \
   %D%/packages/patches/dovecot-trees-support-dovecot-2.3.patch \
-  %D%/packages/patches/doxygen-gcc-ice.patch                   \
   %D%/packages/patches/doxygen-test.patch                      \
   %D%/packages/patches/dropbear-CVE-2018-15599.patch           \
   %D%/packages/patches/dvd+rw-tools-add-include.patch          \
@@ -658,12 +664,13 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/elogind-glibc-2.27.patch                        \
   %D%/packages/patches/einstein-build.patch                    \
   %D%/packages/patches/emacs-exec-path.patch                   \
-  %D%/packages/patches/emacs-exwm-fix-fullscreen-issue.patch   \
   %D%/packages/patches/emacs-fix-scheme-indent-function.patch  \
   %D%/packages/patches/emacs-json-reformat-fix-tests.patch     \
   %D%/packages/patches/emacs-highlight-stages-add-gexp.patch   \
+  %D%/packages/patches/emacs-pdf-tools-poppler.patch           \
   %D%/packages/patches/emacs-scheme-complete-scheme-r5rs-info.patch    \
   %D%/packages/patches/emacs-source-date-epoch.patch           \
+  %D%/packages/patches/emacs-realgud-fix-configure-ac.patch    \
   %D%/packages/patches/enlightenment-fix-setuid-path.patch     \
   %D%/packages/patches/erlang-man-path.patch                   \
   %D%/packages/patches/eudev-rules-directory.patch             \
@@ -682,7 +689,9 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/fcgi-2.4.0-poll.patch                   \
   %D%/packages/patches/fifo-map-fix-flags-for-gcc.patch                \
   %D%/packages/patches/fifo-map-remove-catch.hpp.patch         \
+  %D%/packages/patches/findutils-gnulib-libio.patch            \
   %D%/packages/patches/findutils-localstatedir.patch           \
+  %D%/packages/patches/findutils-makedev.patch                 \
   %D%/packages/patches/findutils-test-xargs.patch              \
   %D%/packages/patches/flann-cmake-3.11.patch                  \
   %D%/packages/patches/flint-ldconfig.patch                    \
@@ -692,7 +701,6 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/freeimage-CVE-2016-5684.patch           \
   %D%/packages/patches/freeimage-fix-build-with-gcc-5.patch    \
   %D%/packages/patches/freeimage-unbundle.patch                \
-  %D%/packages/patches/freetype-CVE-2018-6942.patch            \
   %D%/packages/patches/fuse-overlapping-headers.patch                          \
   %D%/packages/patches/gawk-shell.patch                                \
   %D%/packages/patches/gcc-arm-bug-71399.patch                 \
@@ -702,7 +710,9 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/gcc-fix-texi2pod.patch                  \
   %D%/packages/patches/gcc-4.8-libsanitizer-fix.patch          \
   %D%/packages/patches/gcc-4.9-libsanitizer-fix.patch          \
+  %D%/packages/patches/gcc-4.9-libsanitizer-ustat.patch                \
   %D%/packages/patches/gcc-libsanitizer-fix.patch              \
+  %D%/packages/patches/gcc-libsanitizer-ustat.patch            \
   %D%/packages/patches/gcc-libvtv-runpath.patch                        \
   %D%/packages/patches/gcc-strmov-store-file-names.patch       \
   %D%/packages/patches/gcc-4-compile-with-gcc-5.patch           \
@@ -719,18 +729,18 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/gcr-disable-failing-tests.patch         \
   %D%/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch      \
   %D%/packages/patches/gd-CVE-2018-5711.patch                  \
+  %D%/packages/patches/gd-CVE-2018-1000222.patch               \
   %D%/packages/patches/gd-fix-tests-on-i686.patch              \
   %D%/packages/patches/gd-freetype-test-failure.patch          \
   %D%/packages/patches/gdm-CVE-2018-14424.patch                        \
-  %D%/packages/patches/gemma-intel-compat.patch                        \
   %D%/packages/patches/geoclue-config.patch                    \
   %D%/packages/patches/ghc-8.0-fall-back-to-madv_dontneed.patch \
   %D%/packages/patches/ghc-dont-pass-linker-flags-via-response-files.patch     \
-  %D%/packages/patches/ghostscript-CVE-2018-10194.patch                \
+  %D%/packages/patches/ghostscript-CVE-2018-16509.patch                \
+  %D%/packages/patches/ghostscript-bug-699708.patch            \
   %D%/packages/patches/ghostscript-no-header-id.patch          \
   %D%/packages/patches/ghostscript-no-header-uuid.patch                \
   %D%/packages/patches/ghostscript-no-header-creationdate.patch \
-  %D%/packages/patches/ghostscript-runpath.patch               \
   %D%/packages/patches/giflib-make-reallocarray-private.patch  \
   %D%/packages/patches/glib-networking-ssl-cert-file.patch     \
   %D%/packages/patches/glib-tests-timer.patch                  \
@@ -753,6 +763,7 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/glibc-vectorized-strcspn-guards.patch   \
   %D%/packages/patches/glibc-versioned-locpath.patch           \
   %D%/packages/patches/glibc-2.27-git-fixes.patch              \
+  %D%/packages/patches/glibc-2.28-git-fixes.patch              \
   %D%/packages/patches/glusterfs-use-PATH-instead-of-hardcodes.patch           \
   %D%/packages/patches/glog-gcc-5-demangling.patch             \
   %D%/packages/patches/gmp-arm-asm-nothumb.patch               \
@@ -760,6 +771,7 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/gnome-todo-libical-compat.patch         \
   %D%/packages/patches/gnome-tweak-tool-search-paths.patch     \
   %D%/packages/patches/gnucash-price-quotes-perl.patch         \
+  %D%/packages/patches/gnucash-disable-failing-tests.patch     \
   %D%/packages/patches/gnutls-skip-trust-store-test.patch      \
   %D%/packages/patches/gnutls-skip-pkgconfig-test.patch                \
   %D%/packages/patches/gobject-introspection-absolute-shlib-path.patch \
@@ -771,6 +783,7 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/grep-timing-sensitive-test.patch                \
   %D%/packages/patches/groff-source-date-epoch.patch           \
   %D%/packages/patches/groovy-add-exceptionutilsgenerator.patch        \
+  %D%/packages/patches/grub-binutils-compat.patch              \
   %D%/packages/patches/grub-check-error-efibootmgr.patch       \
   %D%/packages/patches/gsl-test-i686.patch                     \
   %D%/packages/patches/gspell-dash-test.patch                  \
@@ -804,16 +817,14 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/hdf-eos5-remove-gctp.patch              \
   %D%/packages/patches/hdf-eos5-fix-szip.patch                 \
   %D%/packages/patches/hdf-eos5-fortrantests.patch             \
-  %D%/packages/patches/hmmer-remove-cpu-specificity.patch      \
   %D%/packages/patches/higan-remove-march-native-flag.patch    \
   %D%/packages/patches/hubbub-sort-entities.patch              \
   %D%/packages/patches/hurd-fix-eth-multiplexer-dependency.patch        \
+  %D%/packages/patches/hplip-remove-imageprocessor.patch       \
   %D%/packages/patches/hydra-disable-darcs-test.patch          \
   %D%/packages/patches/icecat-avoid-bundled-libraries.patch    \
-  %D%/packages/patches/icecat-bug-1413868-pt1.patch            \
-  %D%/packages/patches/icecat-CVE-2018-5157-and-CVE-2018-5158.patch    \
-  %D%/packages/patches/icecat-use-system-graphite2.patch       \
-  %D%/packages/patches/icecat-use-system-harfbuzz.patch                \
+  %D%/packages/patches/icecat-use-system-graphite2+harfbuzz.patch      \
+  %D%/packages/patches/icecat-use-system-media-libs.patch      \
   %D%/packages/patches/icedtea-6-hotspot-gcc-segfault-workaround.patch  \
   %D%/packages/patches/icedtea-7-hotspot-gcc-segfault-workaround.patch  \
   %D%/packages/patches/id3lib-CVE-2007-4460.patch                      \
@@ -831,10 +842,8 @@ dist_patch_DATA =                                          \
   %D%/packages/patches/java-xerces-bootclasspath.patch \
   %D%/packages/patches/java-xerces-build_dont_unzip.patch      \
   %D%/packages/patches/java-xerces-xjavac_taskdef.patch        \
-  %D%/packages/patches/jemalloc-arm-address-bits.patch         \
   %D%/packages/patches/jbig2dec-ignore-testtest.patch          \
   %D%/packages/patches/json-glib-fix-tests-32bit.patch         \
-  %D%/packages/patches/jq-CVE-2015-8863.patch                  \
   %D%/packages/patches/kdbusaddons-kinit-file-name.patch       \
   %D%/packages/patches/khmer-use-libraries.patch                \
   %D%/packages/patches/libziparchive-add-includes.patch                \
@@ -851,7 +860,7 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/kobodeluxe-graphics-window-signed-char.patch    \
   %D%/packages/patches/laby-make-install.patch                 \
   %D%/packages/patches/ldc-bootstrap-disable-tests.patch       \
-  %D%/packages/patches/ldc-1.7.0-disable-phobos-tests.patch    \
+  %D%/packages/patches/ldc-disable-phobos-tests.patch          \
   %D%/packages/patches/ledger-fix-uninitialized.patch          \
   %D%/packages/patches/ledger-revert-boost-python-fix.patch    \
   %D%/packages/patches/liba52-enable-pic.patch                 \
@@ -876,18 +885,17 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/libevent-2.1-skip-failing-test.patch    \
   %D%/packages/patches/libexif-CVE-2016-6328.patch             \
   %D%/packages/patches/libexif-CVE-2017-7544.patch             \
+  %D%/packages/patches/libgcrypt-make-yat2m-reproducible.patch \
   %D%/packages/patches/libgit2-mtime-0.patch                   \
+  %D%/packages/patches/libgit2-oom-test.patch                  \
   %D%/packages/patches/libgdata-fix-tests.patch                        \
   %D%/packages/patches/libgdata-glib-duplicate-tests.patch     \
   %D%/packages/patches/libgnome-encoding.patch                 \
   %D%/packages/patches/libgnomeui-utf8.patch                   \
-  %D%/packages/patches/libgpg-error-aarch64-logging-fix.patch  \
-  %D%/packages/patches/libgxps-CVE-2017-11590.patch            \
   %D%/packages/patches/libffi-3.2.1-complex-alpha.patch                \
   %D%/packages/patches/libjxr-fix-function-signature.patch     \
   %D%/packages/patches/libjxr-fix-typos.patch                  \
   %D%/packages/patches/libotr-test-auth-fix.patch              \
-  %D%/packages/patches/liblxqt-include.patch                   \
   %D%/packages/patches/libmad-armv7-thumb-pt1.patch            \
   %D%/packages/patches/libmad-armv7-thumb-pt2.patch            \
   %D%/packages/patches/libmad-frame-length.patch               \
@@ -915,6 +923,7 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/libutils-remove-damaging-includes.patch \
   %D%/packages/patches/libvdpau-va-gl-unbundle.patch           \
   %D%/packages/patches/libvpx-CVE-2016-2818.patch              \
+  %D%/packages/patches/libvpx-use-after-free-in-postproc.patch \
   %D%/packages/patches/libxslt-generated-ids.patch             \
   %D%/packages/patches/libxt-guix-search-paths.patch           \
   %D%/packages/patches/lierolibre-check-unaligned-access.patch \
@@ -939,10 +948,8 @@ dist_patch_DATA =                                          \
   %D%/packages/patches/lvm2-static-link.patch                  \
   %D%/packages/patches/lxsession-use-gapplication.patch         \
   %D%/packages/patches/lyx-2.2.3-fix-test.patch                        \
-  %D%/packages/patches/mailutils-uninitialized-memory.patch    \
   %D%/packages/patches/make-glibc-compat.patch                 \
   %D%/packages/patches/make-impure-dirs.patch                  \
-  %D%/packages/patches/mariadb-gcc-ice.patch                   \
   %D%/packages/patches/mariadb-client-test-32bit.patch         \
   %D%/packages/patches/mars-install.patch                      \
   %D%/packages/patches/mars-sfml-2.3.patch                     \
@@ -953,7 +960,7 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/mcrypt-CVE-2012-4409.patch                      \
   %D%/packages/patches/mcrypt-CVE-2012-4426.patch                      \
   %D%/packages/patches/mcrypt-CVE-2012-4527.patch                      \
-  %D%/packages/patches/mes-nyacc-0.86.0.patch                  \
+  %D%/packages/patches/meandmyshadow-define-paths-earlier.patch        \
   %D%/packages/patches/mesa-skip-disk-cache-test.patch         \
   %D%/packages/patches/meson-for-build-rpath.patch             \
   %D%/packages/patches/metabat-fix-compilation.patch           \
@@ -975,10 +982,11 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/mupen64plus-ui-console-notice.patch     \
   %D%/packages/patches/mupen64plus-video-z64-glew-correct-path.patch    \
   %D%/packages/patches/mutt-store-references.patch             \
-  %D%/packages/patches/myrepos-CVE-2018-7032.patch             \
+  %D%/packages/patches/m4-gnulib-libio.patch                   \
   %D%/packages/patches/net-tools-bitrot.patch                  \
   %D%/packages/patches/netcdf-date-time.patch                  \
   %D%/packages/patches/netcdf-tst_h_par.patch                  \
+  %D%/packages/patches/netsurf-message-timestamp.patch         \
   %D%/packages/patches/netsurf-system-utf8proc.patch           \
   %D%/packages/patches/netsurf-y2038-tests.patch               \
   %D%/packages/patches/netsurf-longer-test-timeout.patch       \
@@ -991,6 +999,7 @@ dist_patch_DATA =                                           \
   %D%/packages/patches/nvi-db4.patch                           \
   %D%/packages/patches/nyacc-binary-literals.patch             \
   %D%/packages/patches/nyx-show-header-stats-with-python3.patch        \
+  %D%/packages/patches/oath-toolkit-glibc-compat.patch         \
   %D%/packages/patches/ocaml-bisect-fix-camlp4-in-another-directory.patch      \
   %D%/packages/patches/ocaml-bitstring-fix-configure.patch \
   %D%/packages/patches/ocaml-CVE-2015-8869.patch               \
@@ -1007,9 +1016,7 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/openocd-nrf52.patch                     \
   %D%/packages/patches/opensmtpd-fix-crash.patch               \
   %D%/packages/patches/openssl-runpath.patch                   \
-  %D%/packages/patches/openssl-1.0.2-CVE-2018-0495.patch       \
-  %D%/packages/patches/openssl-1.0.2-CVE-2018-0732.patch       \
-  %D%/packages/patches/openssl-1.1.0-c-rehash-in.patch         \
+  %D%/packages/patches/openssl-1.1-c-rehash-in.patch           \
   %D%/packages/patches/openssl-c-rehash-in.patch               \
   %D%/packages/patches/orpheus-cast-errors-and-includes.patch  \
   %D%/packages/patches/osip-CVE-2017-7853.patch                        \
@@ -1018,13 +1025,11 @@ dist_patch_DATA =                                               \
   %D%/packages/patches/p7zip-CVE-2016-9296.patch               \
   %D%/packages/patches/p7zip-CVE-2017-17969.patch              \
   %D%/packages/patches/p7zip-remove-unused-code.patch          \
+  %D%/packages/patches/parted-glibc-compat.patch               \
   %D%/packages/patches/patchelf-page-size.patch                        \
   %D%/packages/patches/patchelf-rework-for-arm.patch           \
   %D%/packages/patches/patchutils-xfail-gendiff-tests.patch    \
   %D%/packages/patches/patch-hurd-path-max.patch               \
-  %D%/packages/patches/perf-gcc-ice.patch                      \
-  %D%/packages/patches/perl-archive-tar-CVE-2018-12015.patch   \
-  %D%/packages/patches/perl-file-path-CVE-2017-6512.patch      \
   %D%/packages/patches/perl-autosplit-default-time.patch       \
   %D%/packages/patches/perl-deterministic-ordering.patch       \
   %D%/packages/patches/perl-finance-quote-unuse-mozilla-ca.patch \
@@ -1043,12 +1048,15 @@ dist_patch_DATA =                                               \
   %D%/packages/patches/pinball-missing-separators.patch                \
   %D%/packages/patches/pinball-src-deps.patch                  \
   %D%/packages/patches/pinball-system-ltdl.patch               \
+  %D%/packages/patches/pinentry-efl.patch                      \
   %D%/packages/patches/pingus-sdl-libs-config.patch            \
   %D%/packages/patches/pius.patch                              \
   %D%/packages/patches/pixman-CVE-2016-5296.patch              \
   %D%/packages/patches/plink-1.07-unclobber-i.patch            \
   %D%/packages/patches/plink-endian-detection.patch            \
   %D%/packages/patches/plotutils-libpng-jmpbuf.patch           \
+  %D%/packages/patches/podofo-cmake-3.12.patch                 \
+  %D%/packages/patches/poppler-CVE-2018-19149.patch            \
   %D%/packages/patches/portaudio-audacity-compat.patch         \
   %D%/packages/patches/portmidi-modular-build.patch            \
   %D%/packages/patches/potrace-tests.patch                     \
@@ -1066,6 +1074,8 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/pygpgme-disable-problematic-tests.patch  \
   %D%/packages/patches/pyqt-configure.patch                    \
   %D%/packages/patches/pyqt-public-sip.patch                   \
+  %D%/packages/patches/python2-CVE-2018-14647.patch            \
+  %D%/packages/patches/python2-CVE-2018-1000802.patch          \
   %D%/packages/patches/python-2-deterministic-build-info.patch \
   %D%/packages/patches/python-2.7-adjust-tests.patch           \
   %D%/packages/patches/python-2.7-search-paths.patch           \
@@ -1074,24 +1084,17 @@ dist_patch_DATA =                                               \
   %D%/packages/patches/python-3-deterministic-build-info.patch \
   %D%/packages/patches/python-3-search-paths.patch             \
   %D%/packages/patches/python-3-fix-tests.patch                        \
+  %D%/packages/patches/python-CVE-2018-14647.patch             \
   %D%/packages/patches/python-axolotl-AES-fix.patch            \
   %D%/packages/patches/python-cairocffi-dlopen-path.patch      \
+  %D%/packages/patches/python-cffi-x87-stack-clean.patch       \
   %D%/packages/patches/python-fix-tests.patch                  \
-  %D%/packages/patches/python-genshi-add-support-for-python-3.4-AST.patch      \
-  %D%/packages/patches/python-genshi-buildable-on-python-2.7.patch     \
-  %D%/packages/patches/python-genshi-disable-speedups-on-python-3.3.patch      \
-  %D%/packages/patches/python-genshi-fix-tests-on-python-3.5.patch     \
-  %D%/packages/patches/python-genshi-isstring-helper.patch     \
-  %D%/packages/patches/python-genshi-stripping-of-unsafe-script-tags.patch     \
   %D%/packages/patches/python2-larch-coverage-4.0a6-compatibility.patch \
-  %D%/packages/patches/python-networkx2-reproducible-build.patch       \
-  %D%/packages/patches/python-pillow-fix-failing-tests.patch   \
   %D%/packages/patches/python2-rdflib-drop-sparqlwrapper.patch \
-  %D%/packages/patches/python-scikit-learn-fix-test-non-determinism.patch      \
   %D%/packages/patches/python-configobj-setuptools.patch       \
   %D%/packages/patches/python-faker-fix-build-32bit.patch      \
   %D%/packages/patches/python-mox3-python3.6-compat.patch      \
-  %D%/packages/patches/python-paste-remove-website-test.patch  \
+  %D%/packages/patches/python-testtools.patch                  \
   %D%/packages/patches/python-paste-remove-timing-test.patch   \
   %D%/packages/patches/python-pycrypto-CVE-2013-7459.patch     \
   %D%/packages/patches/python2-pygobject-2-gi-info-type-error-domain.patch \
@@ -1104,8 +1107,12 @@ dist_patch_DATA =                                                \
   %D%/packages/patches/qt4-ldflags.patch                       \
   %D%/packages/patches/qtbase-use-TZDIR.patch                  \
   %D%/packages/patches/qtscript-disable-tests.patch            \
+  %D%/packages/patches/qt-5-renameat2.patch                    \
   %D%/packages/patches/quagga-reproducible-build.patch          \
   %D%/packages/patches/quickswitch-fix-dmenu-check.patch       \
+  %D%/packages/patches/quilt-test-fix-regex.patch              \
+  %D%/packages/patches/quilt-compat-getopt-fix-second-separator.patch  \
+  %D%/packages/patches/quilt-compat-getopt-fix-option-with-nondigit-param.patch        \
   %D%/packages/patches/qtwebkit-pbutils-include.patch          \
   %D%/packages/patches/rapicorn-isnan.patch                    \
   %D%/packages/patches/raptor2-heap-overflow.patch             \
@@ -1119,7 +1126,6 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/reptyr-fix-gcc-7.patch                  \
   %D%/packages/patches/ripperx-missing-file.patch              \
   %D%/packages/patches/rpcbind-CVE-2017-8779.patch             \
-  %D%/packages/patches/rsem-makefile.patch                     \
   %D%/packages/patches/rtags-separate-rct.patch                        \
   %D%/packages/patches/racket-store-checksum-override.patch    \
   %D%/packages/patches/ruby-rubygems-276-for-ruby24.patch      \
@@ -1128,8 +1134,10 @@ dist_patch_DATA =                                                \
   %D%/packages/patches/ruby-rack-ignore-failing-test.patch      \
   %D%/packages/patches/ruby-tzinfo-data-ignore-broken-test.patch\
   %D%/packages/patches/rust-1.19-mrustc.patch                  \
+  %D%/packages/patches/rust-1.25-accept-more-detailed-gdb-lines.patch \
   %D%/packages/patches/rust-bootstrap-stage0-test.patch                \
   %D%/packages/patches/rust-coresimd-doctest.patch             \
+  %D%/packages/patches/rust-mdbook-support-reproducible-builds-by-forcing-window.search.patch \
   %D%/packages/patches/rxvt-unicode-escape-sequences.patch     \
   %D%/packages/patches/scheme48-tests.patch                    \
   %D%/packages/patches/scotch-test-threading.patch             \
@@ -1145,11 +1153,14 @@ dist_patch_DATA =                                               \
   %D%/packages/patches/slim-sigusr1.patch                      \
   %D%/packages/patches/slim-reset.patch                                \
   %D%/packages/patches/slim-login.patch                                \
+  %D%/packages/patches/snappy-add-O2-flag-in-CmakeLists.txt.patch      \
   %D%/packages/patches/sooperlooper-build-with-wx-30.patch     \
+  %D%/packages/patches/soundconverter-remove-gconf-dependency.patch    \
   %D%/packages/patches/soundtouch-CVE-2018-14044-14045.patch   \
   %D%/packages/patches/soundtouch-CVE-2018-1000223.patch       \
   %D%/packages/patches/steghide-fixes.patch                    \
   %D%/packages/patches/superlu-dist-scotchmetis.patch          \
+  %D%/packages/patches/swig-guile-gc.patch                     \
   %D%/packages/patches/swish-e-search.patch                    \
   %D%/packages/patches/swish-e-format-security.patch           \
   %D%/packages/patches/synfigstudio-fix-ui-with-gtk3.patch     \
@@ -1163,6 +1174,9 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/tcsh-fix-out-of-bounds-read.patch       \
   %D%/packages/patches/teensy-loader-cli-help.patch            \
   %D%/packages/patches/teeworlds-use-latest-wavpack.patch      \
+  %D%/packages/patches/texinfo-perl-compat.patch               \
+  %D%/packages/patches/texinfo-5-perl-compat.patch             \
+  %D%/packages/patches/telegram-purple-adjust-test.patch       \
   %D%/packages/patches/texi2html-document-encoding.patch       \
   %D%/packages/patches/texi2html-i18n.patch                    \
   %D%/packages/patches/thefuck-test-environ.patch              \
@@ -1173,7 +1187,7 @@ dist_patch_DATA =                                         \
   %D%/packages/patches/tk-find-library.patch                   \
   %D%/packages/patches/ttf2eot-cstddef.patch                   \
   %D%/packages/patches/ttfautohint-source-date-epoch.patch     \
-  %D%/packages/patches/tophat-build-with-later-seqan.patch     \
+  %D%/packages/patches/tomsfastmath-constness.patch            \
   %D%/packages/patches/totem-meson-easy-codec.patch            \
   %D%/packages/patches/tuxpaint-stamps-path.patch              \
   %D%/packages/patches/twinkle-include-qregexpvalidator.patch  \
@@ -1226,13 +1240,9 @@ dist_patch_DATA =                                                \
   %D%/packages/patches/wpa-supplicant-fix-zeroed-keys.patch    \
   %D%/packages/patches/wpa-supplicant-fix-nonce-reuse.patch    \
   %D%/packages/patches/wpa-supplicant-krack-followups.patch    \
-  %D%/packages/patches/wxmaxima-do-not-use-old-gnuplot-parameters.patch        \
-  %D%/packages/patches/x265-arm-asm-primitives.patch           \
-  %D%/packages/patches/x265-fix-ppc64le-build.patch            \
-  %D%/packages/patches/xapian-revert-5489fb2f8.patch           \
+  %D%/packages/patches/x265-detect512-all-arches.patch         \
   %D%/packages/patches/xboing-CVE-2004-0149.patch              \
   %D%/packages/patches/xf86-video-ark-remove-mibstore.patch    \
-  %D%/packages/patches/xf86-video-ast-remove-mibstore.patch    \
   %D%/packages/patches/xf86-video-geode-glibc-2.20.patch       \
   %D%/packages/patches/xf86-video-i128-remove-mibstore.patch   \
   %D%/packages/patches/xf86-video-mach64-glibc-2.20.patch      \
@@ -1246,10 +1256,7 @@ dist_patch_DATA =                                                \
   %D%/packages/patches/xinetd-fix-fd-leak.patch                        \
   %D%/packages/patches/xinetd-CVE-2013-4342.patch              \
   %D%/packages/patches/xmodmap-asprintf.patch                  \
-  %D%/packages/patches/zathura-pdf-mupdf-link-to-jpeg-libraries.patch \
-  %D%/packages/patches/zathura-plugindir-environment-variable.patch    \
-  %D%/packages/patches/zstd-fix-stdin-list-without-tty.patch   \
-  %D%/packages/patches/zstd-fix-stdin-list-test.patch
+  %D%/packages/patches/zathura-plugindir-environment-variable.patch
 
 MISC_DISTRO_FILES =                            \
   %D%/packages/ld-wrapper.in