;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2013, 2014 Andreas Enge <andreas@enge.fr>
+;;; Copyright © 2013, 2014
, 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org>
;;; Copyright © 2014 John Darrington <jmd@gnu.org>
;;; Copyright © 2014 Eric Bavier <bavier@member.fsf.org>
+;;; Copyright © 2014 Federico Beffa <beffa@fbengineering.ch>
+;;; Copyright © 2014 Mathieu Lirzin <mathieu.lirzin@openmailbox.org>
+;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages maths)
+ #:use-module (ice-9 regex)
#:use-module (gnu packages)
- #:use-module ((guix licenses)
- #:renamer (symbol-prefix-proc 'license:))
+ #:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix download)
+ #:use-module (guix svn-download)
#:use-module (guix utils)
#:use-module (guix build-system cmake)
#:use-module (guix build-system gnu)
#:use-module (gnu packages algebra)
#:use-module (gnu packages bison)
+ #:use-module (gnu packages check)
#:use-module (gnu packages cmake)
#:use-module (gnu packages compression)
#:use-module (gnu packages curl)
#:use-module (gnu packages gcc)
#:use-module (gnu packages gd)
#:use-module (gnu packages ghostscript)
+ #:use-module (gnu packages glib)
#:use-module (gnu packages gtk)
#:use-module (gnu packages less)
+ #:use-module (gnu packages lisp)
#:use-module (gnu packages gnome)
#:use-module (gnu packages xorg)
#:use-module (gnu packages gl)
+ #:use-module (gnu packages m4)
#:use-module (gnu packages mpi)
#:use-module (gnu packages multiprecision)
#:use-module (gnu packages pcre)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages readline)
+ #:use-module (gnu packages tbb)
#:use-module (gnu packages tcsh)
+ #:use-module (gnu packages tcl)
#:use-module (gnu packages texinfo)
#:use-module (gnu packages texlive)
- #:use-module (gnu packages xml))
+ #:use-module (gnu packages xml)
+ #:use-module (gnu packages zip))
(define-public units
(package
(license license:gpl3+)
(home-page "http://www.gnu.org/software/units/")))
+(define-public dionysus
+ (package
+ (name "dionysus")
+ (version "1.3.0")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "mirror://gnu/dionysus/dionysus-" version
+ ".tar.gz"))
+ (sha256
+ (base32
+ "1aqnvw6z33bzqgd1ga571pnx6vq2zrkckm1cz91grv45h4jr9vgs"))))
+ (build-system gnu-build-system)
+ (inputs `(("tcl" ,tcl))) ;for 'tclsh'
+ (synopsis "Local search for universal constants and scientific values")
+ (description
+ "GNU Dionysus is a convenient system for quickly retrieving the values of
+mathematical constants used in science and engineering. Values can be
+searched using a simple command-line tool, choosing from three databases:
+universal constants, atomic numbers, and constants related to
+semiconductors.")
+ (license license:gpl3+)
+ (home-page "http://www.gnu.org/software/dionysus/")))
+
(define-public gsl
(package
(name "gsl")
(define-public glpk
(package
(name "glpk")
- (version "4.54")
+ (version "4.55")
(source
(origin
(method url-fetch)
version ".tar.gz"))
(sha256
(base32
- "18gr2anv8gyps6j9f22k7li6w07glvww666sdqblvlq2hh3whwmb"))))
+ "1rqx5fzj1mhkifilip5mkxybpj2wkniq5qcn8h1w2vkr2rzhs29p"))))
(build-system gnu-build-system)
(inputs
`(("gmp" ,gmp)))
(define-public pspp
(package
(name "pspp")
- (version "0.8.3")
+ (version "0.8.4")
(source
(origin
(method url-fetch)
version ".tar.gz"))
(sha256
(base32
- "0vri2pzvmm38qaihfvwlry30f40lcnps4blg59ixic4q20ldxf5d"))))
+ "0b65q45x05ps95pph6glbg7ymdr638nfb0rk9x5x9qm5k073pk5z"))))
(build-system gnu-build-system)
(inputs
`(("cairo" ,cairo)
("gtksourceview" ,gtksourceview)
("zlib" ,zlib)))
(native-inputs
- `(("perl" ,perl)
+ `(("glib" ,glib "bin") ;for glib-genmarshal
+ ("perl" ,perl)
("pkg-config" ,pkg-config)))
(home-page "http://www.gnu.org/software/pspp/")
(synopsis "Statistical analysis")
(description
"GNU PSPP is a statistical analysis program. It can perform
-descriptive statistics, T-tests, linear regression and non-parametric tests.
-It features both a graphical interface as well as command-line input. PSPP is
-designed to interoperate with Gnumeric, LibreOffice and OpenOffice. Data can
-be imported from spreadsheets, text files and database sources and it can be
-output in text, PostScript, PDF or HTML.")
+descriptive statistics, T-tests, linear regression and non-parametric tests.
+It features both a graphical interface as well as command-line input. PSPP
+is designed to interoperate with Gnumeric, LibreOffice and OpenOffice. Data
+can be imported from spreadsheets, text files and database sources and it can
+be output in text, PostScript, PDF or HTML.")
(license license:gpl3+)))
+(define-public arpack-ng
+ (package
+ (name "arpack-ng")
+ (version "3.2.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/opencollab/arpack-ng/archive/"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1fwch6vipms1ispzg2djvbzv5wag36f1dmmr3xs3mbp6imfyhvff"))))
+ (build-system gnu-build-system)
+ (home-page "https://github.com/opencollab/arpack-ng")
+ (inputs
+ `(("lapack" ,lapack)
+ ("fortran" ,gfortran-4.8)))
+ (synopsis "Fortran subroutines for solving eigenvalue problems")
+ (description
+ "ARPACK-NG is a collection of Fortran77 subroutines designed to solve
+large scale eigenvalue problems.")
+ (license (license:non-copyleft "file://COPYING"
+ "See COPYING in the distribution."))))
+
(define-public lapack
(package
(name "lapack")
(description
"LAPACK is a Fortran 90 library for solving the most commonly occurring
problems in numerical linear algebra.")
- (license (license:bsd-style "file://LICENSE"
+ (license (license:non-copyleft "file://LICENSE"
"See LICENSE in the distribution."))))
(define-public gnuplot
(home-page "http://www.gnuplot.info")
(synopsis "Command-line driven graphing utility")
(description "Gnuplot is a portable command-line driven graphing
-utility. It was originally created to allow scientists and students to
+utility. It was originally created to allow scientists and students to
visualize mathematical functions and data interactively, but has grown to
-support many non-interactive uses such as web scripting. It is also used as a
+support many non-interactive uses such as web scripting. It is also used as a
plotting engine by third-party applications like Octave.")
;; X11 Style with the additional restriction that derived works may only be
;; distributed as patches to the original.
(source
(origin
(method url-fetch)
- (uri (string-append "http://www.hdfgroup.org/ftp/HDF5/current/src/hdf5-"
+ (uri (string-append "http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-"
+ version "/src/hdf5-"
version ".tar.bz2"))
(sha256
(base32 "0f9n0v3p3lwc7564791a39c6cn1d3dbrn7d1j3ikqsi27a8hy23d"))))
(build-system gnu-build-system)
+ (inputs
+ `(("zlib" ,zlib)))
(arguments
`(#:phases
(alist-cons-before
(substitute* "configure"
(("/bin/mv") "mv")))
%standard-phases)))
- (outputs '("out" "bin" "lib" "include"))
(home-page "http://www.hdfgroup.org")
- (synopsis "Management suite for extremely large and complex data")
+ (synopsis "Management suite for extremely large and complex data")
(description "HDF5 is a suite that makes possible the management of
extremely large and complex data collections.")
(license (license:x11-style
(define-public octave
(package
(name "octave")
- (version "3.8.0")
+ (version "3.8.2")
(source
(origin
(method url-fetch)
version ".tar.gz"))
(sha256
(base32
- "0ks9pr154syw0vb3jn6xsnrkkrbvf9y7i7gaxa28rz6ngxbxvq9l"))))
+ "05slz8yx8k91fqlnfr1f0vni95iq9qmchz41c7nf4isn3b2fjn7j"))))
(build-system gnu-build-system)
(inputs
`(("lapack" ,lapack)
("fltk" ,fltk)
("fontconfig" ,fontconfig)
("freetype" ,freetype)
- ("hdf5-lib" ,hdf5 "lib")
- ("hdf5-include" ,hdf5 "include")
+ ("hdf5" ,hdf5)
("libxft" ,libxft)
("mesa" ,mesa)
("zlib" ,zlib)))
`(("fltk" ,fltk)
("gfortran" ,gfortran-4.8)
("gmp" ,gmp)
- ("hdf5-lib" ,hdf5 "lib")
- ("hdf5-include" ,hdf5 "include")
+ ("hdf5" ,hdf5)
("lapack" ,lapack)
("mesa" ,mesa)
+ ("glu" ,glu)
("libx11" ,libx11)
("libxext" ,libxext)))
(arguments
(description "PETSc, pronounced PET-see (the S is silent), is a suite of
data structures and routines for the scalable (parallel) solution of
scientific applications modeled by partial differential equations.")
- (license (license:bsd-style
+ (license (license:non-copyleft
"http://www.mcs.anl.gov/petsc/documentation/copyright.html"))))
(define-public petsc-complex
(package (inherit petsc)
+ (location (source-properties->location (current-source-location)))
(name "petsc-complex")
(arguments
(substitute-keyword-arguments (package-arguments petsc)
polar-axis plots and three-dimensional plots. Plots can be printed or saved
to BMP, JPEG or PNG image formats.")
(license license:gpl3+)))
+
+(define-public maxima
+ (package
+ (name "maxima")
+ (version "5.34.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "mirror://sourceforge/maxima/Maxima-source/"
+ version "-source/" name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1dw9vfzldpj7lv303xbw0wpyn6ra6i2yzwlrjbcx7j0jm5n43ji0"))))
+ (build-system gnu-build-system)
+ (inputs
+ `(("gcl" ,gcl)
+ ("gnuplot" ,gnuplot) ;for plots
+ ("tk" ,tk))) ;Tcl/Tk is used by 'xmaxima'
+ (native-inputs
+ `(("texinfo" ,texinfo)
+ ("perl" ,perl)))
+ (arguments
+ `(#:configure-flags
+ (list "--enable-gcl"
+ (string-append "--with-posix-shell="
+ (assoc-ref %build-inputs "bash")
+ "/bin/sh")
+ (string-append "--with-wish="
+ (assoc-ref %build-inputs "tk")
+ "/bin/wish"
+ (let ((v ,(package-version tk)))
+ (string-take v (string-index-right v #\.)))))
+ ;; By default Maxima attempts to write temporary files to
+ ;; '/tmp/nix-build-maxima-5.34.1', which doesn't exist. Work around
+ ;; that.
+ #:make-flags (list "TMPDIR=/tmp")
+ #:phases (alist-cons-before
+ 'check 'pre-check
+ (lambda _
+ (chmod "src/maxima" #o555))
+ ;; Make sure the doc and emacs files are found in the
+ ;; standard location. Also configure maxima to find gnuplot
+ ;; without having it on the PATH.
+ (alist-cons-after
+ 'install 'post-install
+ (lambda* (#:key outputs inputs #:allow-other-keys)
+ (let* ((gnuplot (assoc-ref inputs "gnuplot"))
+ (out (assoc-ref outputs "out"))
+ (datadir (string-append out "/share/maxima/" ,version)))
+ (with-directory-excursion out
+ (mkdir-p "share/emacs")
+ (mkdir-p "share/doc")
+ (symlink
+ (string-append datadir "/emacs/")
+ (string-append out "/share/emacs/site-lisp"))
+ (symlink
+ (string-append datadir "/doc/")
+ (string-append out "/share/doc/maxima"))
+ (with-atomic-file-replacement
+ (string-append datadir "/share/maxima-init.lisp")
+ (lambda (in out)
+ (format out "~a ~s~a~%"
+ "(setf $gnuplot_command "
+ (string-append gnuplot "/bin/gnuplot") ")")
+ (dump-port in out))))))
+ %standard-phases))))
+ (home-page "http://maxima.sourceforge.net")
+ (synopsis "Numeric and symbolic expression manipulation")
+ (description "Maxima is a system for the manipulation of symbolic and
+numerical expressions. It yields high precision numeric results by using
+exact fractions, arbitrary precision integers, and variable precision floating
+point numbers")
+ ;; Some files are lgpl2.1+. Some are gpl2+. Some explicitly state gpl1+.
+ ;; Others simply say "GNU General Public License" without stating a
+ ;; version (which implicitly means gpl1+).
+ ;; At least one file (src/maxima.asd) says "version 2."
+ ;; GPLv2 only is therefore the smallest subset.
+ (license license:gpl2)))
+
+(define-public muparser
+ (package
+ (name "muparser")
+ (version "2.2.5")
+ (source
+ (origin
+ (method svn-fetch)
+ (uri (svn-reference
+ (url "http://muparser.googlecode.com/svn/trunk/")
+ (revision 34)))
+ (sha256
+ (base32
+ "1d6bdbhx9zj3srwj3m7c9hvr18gnx1fx43h6d25my7q85gicpcwn"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:configure-flags '("--enable-samples=no")
+ #:tests? #f)) ;no "check" target
+ (home-page "http://muparser.beltoforion.de/")
+ (synopsis "Fast parser library for mathematical expressions")
+ (description
+ "muParser is an extensible high performance math parser library. It is
+based on transforming an expression into a bytecode and precalculating
+constant parts of it.")
+ (license license:expat)))
+
+(define-public openblas
+ (package
+ (name "openblas")
+ (version "0.2.13")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/xianyi/OpenBLAS/tarball/v"
+ version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1asg5mix13ipxgj5h2yj2p0r8km1di5jbcjkn5gmhb37nx7qfv6k"))))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:tests? #f ;no "check" target
+ #:substitutable? #f ;force local build because of CPU detection
+ #:make-flags
+ (list (string-append "PREFIX=" (assoc-ref %outputs "out"))
+ "SHELL=bash"
+ "NO_LAPACK=1")
+ ;; no configure script
+ #:phases (alist-delete 'configure %standard-phases)))
+ (inputs
+ `(("fortran" ,gfortran-4.8)))
+ (native-inputs
+ `(("cunit" ,cunit)
+ ("perl" ,perl)))
+ (home-page "http://www.openblas.net/")
+ (synopsis "Optimized BLAS library based on GotoBLAS")
+ (description
+ "OpenBLAS is a BLAS library forked from the GotoBLAS2-1.13 BSD version.")
+ (license license:bsd-3)))
+
+(define-public openlibm
+ (package
+ (name "openlibm")
+ (version "0.4.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/JuliaLang/openlibm/archive/v"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "0cwqqqlblj3kzp9aq1wnpfs1fl0qd1wp1xzm5shb09w06i4rh9nn"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:make-flags
+ (list (string-append "prefix=" (assoc-ref %outputs "out")))
+ #:phases
+ ;; no configure script
+ (alist-delete 'configure %standard-phases)
+ #:tests? #f)) ;the tests are part of the default target
+ (home-page "http://openlibm.org/")
+ (synopsis "Portable C mathematical library (libm)")
+ (description
+ "OpenLibm is an effort to have a high quality, portable, standalone C
+mathematical library (libm). It can be used standalone in applications and
+programming language implementations. The project was born out of a need to
+have a good libm for the Julia programming langage that worked consistently
+across compilers and operating systems, and in 32-bit and 64-bit
+environments.")
+ ;; See LICENSE.md for details.
+ (license (list license:expat
+ license:isc
+ license:bsd-2
+ license:public-domain
+ license:lgpl2.1+))))
+
+(define-public openspecfun
+ (package
+ (name "openspecfun")
+ (version "0.4")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/JuliaLang/openspecfun/archive/v"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "0nsa3jjmlhcqkw5ba5ypbn3n0c8b6lc22zzlxnmxkxi9shhdx65z"))))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:tests? #f ;no "check" target
+ #:make-flags
+ (list (string-append "prefix=" (assoc-ref %outputs "out")))
+ ;; no configure script
+ #:phases (alist-delete 'configure %standard-phases)))
+ (inputs
+ `(("fortran" ,gfortran-4.8)))
+ (home-page "https://github.com/JuliaLang/openspecfun")
+ (synopsis "Collection of special mathematical functions")
+ (description
+ "Openspecfun provides AMOS and Faddeeva. AMOS (from Netlib) is a
+portable package for Bessel Functions of a Complex Argument and Nonnegative
+Order; it contains subroutines for computing Bessel functions and Airy
+functions. Faddeeva allows computing the various error functions of arbitrary
+complex arguments (Faddeeva function, error function, complementary error
+function, scaled complementary error function, imaginary error function, and
+Dawson function); given these, one can also easily compute Voigt functions,
+Fresnel integrals, and similar related functions as well.")
+ ;; Faddeeva is released under the Expat license; AMOS is included as
+ ;; public domain software.
+ (license (list license:expat license:public-domain))))
+
+(define-public suitesparse
+ (package
+ (name "suitesparse")
+ (version "4.4.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append
+ "http://faculty.cse.tamu.edu/davis/SuiteSparse/SuiteSparse-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "100hdzr0mf4mzlwnqpmwpfw4pymgsf9n3g0ywb1yps2nk1zbkdy5"))))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:parallel-build? #f ;cholmod build fails otherwise
+ #:tests? #f ;no "check" target
+ #:make-flags
+ (list "CC=gcc"
+ "BLAS=-lblas"
+ "TBB=-ltbb"
+ "CHOLMOD_CONFIG=-DNPARTITION" ;required when METIS is not used
+ (string-append "INSTALL_LIB="
+ (assoc-ref %outputs "out") "/lib")
+ (string-append "INSTALL_INCLUDE="
+ (assoc-ref %outputs "out") "/include"))
+ #:phases
+ (alist-cons-before
+ 'install 'prepare-out
+ ;; README.txt states that the target directories must exist prior to
+ ;; running "make install".
+ (lambda _
+ (mkdir-p (string-append (assoc-ref %outputs "out") "/lib"))
+ (mkdir-p (string-append (assoc-ref %outputs "out") "/include")))
+ ;; no configure script
+ (alist-delete 'configure %standard-phases))))
+ (inputs
+ `(("tbb" ,tbb)
+ ("lapack" ,lapack)))
+ (home-page "http://faculty.cse.tamu.edu/davis/suitesparse.html")
+ (synopsis "Suite of sparse matrix software")
+ (description
+ "SuiteSparse is a suite of sparse matrix algorithms, including: UMFPACK,
+multifrontal LU factorization; CHOLMOD, supernodal Cholesky; SPQR,
+multifrontal QR; KLU and BTF, sparse LU factorization, well-suited for circuit
+simulation; ordering methods (AMD, CAMD, COLAMD, and CCOLAMD); CSparse and
+CXSparse, a concise sparse Cholesky factorization package; and many other
+packages.")
+ ;; LGPLv2.1+:
+ ;; AMD, CAMD, BTF, COLAMD, CCOLAMD, CSparse, CXSparse, KLU, LDL
+ ;; GPLv2+:
+ ;; GPUQREngine, RBio, SuiteSparse_GPURuntime, SuiteSparseQR, UMFPACK
+ (license (list license:gpl2+ license:lgpl2.1+))))
+
+(define-public atlas
+ (package
+ (name "atlas")
+ (version "3.10.2")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "mirror://sourceforge/math-atlas/atlas"
+ version ".tar.bz2"))
+ (sha256
+ (base32
+ "0bqh4bdnjdyww4mcpg6kn0x7338mfqbdgysn97dzrwwb26di7ars"))))
+ (build-system gnu-build-system)
+ (home-page "http://math-atlas.sourceforge.net/")
+ (inputs `(("gfortran" ,gfortran-4.8)
+ ("lapack-tar" ,(package-source lapack))))
+ (outputs '("out" "doc"))
+ ;; For the moment we drop support for MIPS at it fails to compile. See
+ ;; https://lists.gnu.org/archive/html/guix-devel/2014-11/msg00516.html
+ (supported-systems (delete "mips64el-linux" %supported-systems))
+ (arguments
+ `(#:parallel-build? #f
+ #:parallel-tests? #f
+
+ ;; ATLAS tunes itself for the machine it is built on, as explained at
+ ;; <http://lists.gnu.org/archive/html/guix-devel/2014-10/msg00305.html>.
+ ;; For this reason, we want users to build it locally instead of using
+ ;; substitutes.
+ #:substitutable? #f
+
+ #:modules ((srfi srfi-26)
+ (srfi srfi-1)
+ (guix build gnu-build-system)
+ (guix build utils))
+ #:configure-flags
+ `(;; Generate position independent code suitable for dynamic libraries
+ ;; and use WALL timer to get more accurate timing.
+ "-Fa" "alg" "-fPIC" "-D" "c" "-DWALL"
+ ;; Set word width.
+ "-b"
+ ,,(if (string-match "64" (%current-system))
+ "64"
+ "32")
+ ;; Disable parallel build as it gives errors: atlas_pthread.h is
+ ;; needed to compile C files before it is generated.
+ "-Ss" "pmake" "make -j 1"
+ ;; Probe is failing for MIPS. We therefore define the system
+ ;; architecture explicitly by setting (-A) MACHINETYPE = 49
+ ;; 'MIPSR1xK' and (-V) ISA = 1 'none'.
+ ,,@(if (string-prefix? "mips" (%current-system))
+ (list "-A" "49" "-V" "1")
+ (list))
+ ;; Generate shared libraries.
+ "--shared"
+ ;; Build a full LAPACK library.
+ ,(string-append "--with-netlib-lapack-tarfile="
+ (assoc-ref %build-inputs "lapack-tar")))
+ #:phases
+ (alist-cons-after
+ 'install 'install-doc
+ (lambda* (#:key outputs inputs #:allow-other-keys)
+ (let ((doc (string-append (assoc-ref outputs "doc")
+ "/share/doc/atlas")))
+ (mkdir-p doc)
+ (fold (lambda (file previous)
+ (and previous (zero? (system* "cp" file doc))))
+ #t (find-files "../ATLAS/doc" ".*"))))
+ (alist-cons-after
+ 'check 'check-pt
+ (lambda _ (zero? (system* "make" "ptcheck")))
+ ;; Fix files required to run configure.
+ (alist-cons-before
+ 'configure 'fix-/bin/sh
+ (lambda _
+ ;; Use `sh', not `/bin/sh'.
+ (substitute* (find-files "." "Makefile|configure|SpewMakeInc\\.c")
+ (("/bin/sh")
+ "sh")))
+ ;; Fix /bin/sh in generated make files.
+ (alist-cons-after
+ 'configure 'fix-/bin/sh-in-generated-files
+ (lambda _
+ (substitute* (find-files "." "^[Mm]ake\\.inc.*")
+ (("/bin/sh")
+ "sh")))
+ ;; ATLAS configure program does not accepts the default flags
+ ;; passed by the 'gnu-build-system'.
+ (alist-replace
+ 'configure
+ (lambda* (#:key native-inputs inputs outputs
+ (configure-flags '())
+ #:allow-other-keys #:rest args)
+ (let* ((prefix (assoc-ref outputs "out"))
+ (bash (or (and=> (assoc-ref
+ (or native-inputs inputs) "bash")
+ (cut string-append <> "/bin/bash"))
+ "/bin/sh"))
+ (flags `(,(string-append "--prefix=" prefix)
+ ,@configure-flags))
+ (abs-srcdir (getcwd))
+ (srcdir (string-append "../" (basename abs-srcdir))))
+ (format #t "source directory: ~s (relative from build: ~s)~%"
+ abs-srcdir srcdir)
+ (mkdir "../build")
+ (chdir "../build")
+ (format #t "build directory: ~s~%" (getcwd))
+ (format #t "configure flags: ~s~%" flags)
+ (zero? (apply system* bash
+ (string-append srcdir "/configure")
+ flags))))
+ %standard-phases)))))))
+ (synopsis "Automatically Tuned Linear Algebra Software")
+ (description
+ "ATLAS is an automatically tuned linear algebra software library
+providing C and Fortran77 interfaces to a portably efficient BLAS
+implementation, as well as a few routines from LAPACK.
+
+Optimization occurs at build time. For this reason, the library is built on
+the machine where it is installed, without resorting to pre-built substitutes.
+
+Before building the library, CPU throttling should be disabled. This can be
+done in the BIOS, or, on GNU/Linux, with the following commands:
+
+cpufreq-selector -g performance -c 0
+...
+cpufreq-selector -g performance -c N-1
+
+where N is the number of cores of your CPU. Failure to do so will result in a
+library with poor performance.")
+ (license license:bsd-3)))
+
+(define-public glm
+ (package
+ (name "glm")
+ (version "0.9.6.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "mirror://sourceforge/ogl-math/glm-"
+ version ".zip"))
+ (sha256
+ (base32
+ "1cnjmi033a16a95v6xfkr1bvfmkd26hzdjka8j1819hgn5b1nr8l"))))
+ (build-system cmake-build-system)
+ (native-inputs
+ `(("unzip" ,unzip)))
+ (home-page "http://glm.g-truc.net")
+ (synopsis "OpenGL Mathematics library")
+ (description "OpenGL Mathematics (GLM) is a header-only C++ mathematics
+library for graphics software based on the OpenGL Shading Language (GLSL)
+specifications.")
+ (license license:expat)))
HCoop / jackhill / guix / guix.git / blobdiff