gnu: file: Update to 5.19; add fix for CVE-2014-3587.
[jackhill/guix/guix.git] / gnu-system.am
index 5d817cc..f24da85 100644 (file)
@@ -1,6 +1,6 @@
 # GNU Guix --- Functional package management for GNU
 # Copyright © 2012, 2013, 2014 Ludovic Courtès <ludo@gnu.org>
-# Copyright © 2013 Andreas Enge <andreas@enge.fr>
+# Copyright © 2013, 2014 Andreas Enge <andreas@enge.fr>
 # Copyright © 2013, 2014 Mark H Weaver <mhw@netris.org>
 #
 # This file is part of GNU Guix.
 # binaries.
 
 GNU_SYSTEM_MODULES =                           \
+  gnu.scm                                      \
   gnu/packages.scm                             \
   gnu/packages/acct.scm                                \
   gnu/packages/acl.scm                         \
   gnu/packages/admin.scm                       \
   gnu/packages/algebra.scm                     \
+  gnu/packages/aidc.scm                        \
   gnu/packages/apl.scm                         \
   gnu/packages/apr.scm                         \
   gnu/packages/asciidoc.scm                    \
@@ -35,43 +37,54 @@ GNU_SYSTEM_MODULES =                                \
   gnu/packages/autogen.scm                     \
   gnu/packages/autotools.scm                   \
   gnu/packages/avahi.scm                       \
+  gnu/packages/avrdude.scm                     \
+  gnu/packages/backup.scm                      \
   gnu/packages/base.scm                                \
   gnu/packages/bash.scm                                \
   gnu/packages/bdb.scm                         \
   gnu/packages/bdw-gc.scm                      \
+  gnu/packages/bittorrent.scm                  \
   gnu/packages/bison.scm                       \
   gnu/packages/boost.scm                       \
   gnu/packages/bootstrap.scm                   \
+  gnu/packages/busybox.scm                     \
   gnu/packages/calcurse.scm                    \
+  gnu/packages/ccache.scm                      \
   gnu/packages/cdrom.scm                       \
   gnu/packages/cflow.scm                       \
   gnu/packages/check.scm                       \
   gnu/packages/cmake.scm                       \
   gnu/packages/compression.scm                 \
   gnu/packages/complexity.scm                  \
+  gnu/packages/conkeror.scm                    \
+  gnu/packages/cook.scm                        \
   gnu/packages/cpio.scm                                \
   gnu/packages/cppi.scm                                \
   gnu/packages/cross-base.scm                  \
+  gnu/packages/crypto.scm                      \
   gnu/packages/cryptsetup.scm                  \
   gnu/packages/curl.scm                                \
   gnu/packages/cursynth.scm                    \
   gnu/packages/cyrus-sasl.scm                  \
+  gnu/packages/datamash.scm                    \
   gnu/packages/dc.scm                          \
   gnu/packages/dejagnu.scm                     \
-  gnu/packages/ddrescue.scm                    \
   gnu/packages/dictionaries.scm                        \
+  gnu/packages/disk.scm                                \
   gnu/packages/docbook.scm                     \
+  gnu/packages/doxygen.scm                     \
   gnu/packages/dwm.scm                         \
   gnu/packages/ed.scm                          \
   gnu/packages/elf.scm                         \
   gnu/packages/emacs.scm                       \
-  gnu/packages/fdisk.scm                       \
   gnu/packages/file.scm                                \
+  gnu/packages/fish.scm                                \
   gnu/packages/flex.scm                                \
   gnu/packages/fltk.scm                                \
   gnu/packages/fonts.scm                       \
   gnu/packages/fontutils.scm                   \
   gnu/packages/freeipmi.scm                    \
+  gnu/packages/ftp.scm                         \
   gnu/packages/games.scm                       \
   gnu/packages/gawk.scm                                \
   gnu/packages/gcal.scm                                \
@@ -83,6 +96,7 @@ GNU_SYSTEM_MODULES =                          \
   gnu/packages/gettext.scm                     \
   gnu/packages/ghostscript.scm                 \
   gnu/packages/giflib.scm                      \
+  gnu/packages/gimp.scm                                \
   gnu/packages/gkrellm.scm                     \
   gnu/packages/gl.scm                          \
   gnu/packages/glib.scm                                \
@@ -107,16 +121,17 @@ GNU_SYSTEM_MODULES =                              \
   gnu/packages/guile-wm.scm                    \
   gnu/packages/gv.scm                          \
   gnu/packages/gxmessage.scm                   \
-  gnu/packages/help2man.scm                    \
   gnu/packages/hugs.scm                                \
   gnu/packages/hurd.scm                                \
   gnu/packages/icu4c.scm                       \
   gnu/packages/idutils.scm                     \
+  gnu/packages/image.scm                       \
   gnu/packages/imagemagick.scm                 \
   gnu/packages/indent.scm                      \
   gnu/packages/inkscape.scm                    \
   gnu/packages/irssi.scm                       \
   gnu/packages/iso-codes.scm                   \
+  gnu/packages/jrnl.scm                                \
   gnu/packages/kde.scm                         \
   gnu/packages/ld-wrapper.scm                  \
   gnu/packages/less.scm                                \
@@ -125,33 +140,35 @@ GNU_SYSTEM_MODULES =                              \
   gnu/packages/libdaemon.scm                   \
   gnu/packages/libevent.scm                    \
   gnu/packages/libffi.scm                      \
+  gnu/packages/libftdi.scm                     \
   gnu/packages/libidn.scm                      \
-  gnu/packages/libjpeg.scm                     \
   gnu/packages/libphidget.scm                  \
-  gnu/packages/libpng.scm                      \
   gnu/packages/libsigsegv.scm                  \
-  gnu/packages/libtiff.scm                     \
   gnu/packages/libunistring.scm                        \
   gnu/packages/libusb.scm                      \
   gnu/packages/libunwind.scm                   \
   gnu/packages/lightning.scm                   \
+  gnu/packages/links.scm                       \
   gnu/packages/linux.scm                       \
+  gnu/packages/lisp.scm                        \
   gnu/packages/lout.scm                                \
   gnu/packages/lsh.scm                         \
   gnu/packages/lsof.scm                                \
   gnu/packages/lua.scm                         \
-  gnu/packages/lvm.scm                         \
   gnu/packages/lynx.scm                                \
   gnu/packages/m4.scm                          \
+  gnu/packages/man.scm                         \
   gnu/packages/mail.scm                                \
   gnu/packages/make-bootstrap.scm              \
   gnu/packages/maths.scm                       \
   gnu/packages/mc.scm                          \
+  gnu/packages/mcrypt.scm                      \
   gnu/packages/messaging.scm                   \
   gnu/packages/mit-krb5.scm                    \
   gnu/packages/moe.scm                         \
   gnu/packages/mpd.scm                         \
   gnu/packages/mp3.scm                         \
+  gnu/packages/mpi.scm                         \
   gnu/packages/multiprecision.scm              \
   gnu/packages/mtools.scm                      \
   gnu/packages/mysql.scm                       \
@@ -160,15 +177,18 @@ GNU_SYSTEM_MODULES =                              \
   gnu/packages/ncurses.scm                     \
   gnu/packages/netpbm.scm                      \
   gnu/packages/nettle.scm                      \
+  gnu/packages/node.scm                                \
   gnu/packages/noweb.scm                       \
   gnu/packages/ocaml.scm                       \
   gnu/packages/ocrad.scm                       \
   gnu/packages/onc-rpc.scm                     \
   gnu/packages/openldap.scm                    \
   gnu/packages/openssl.scm                     \
+  gnu/packages/orpheus.scm                     \
   gnu/packages/package-management.scm          \
   gnu/packages/parallel.scm                    \
-  gnu/packages/parted.scm                      \
+  gnu/packages/patchutils.scm                  \
+  gnu/packages/pciutils.scm                    \
   gnu/packages/pcre.scm                                \
   gnu/packages/pdf.scm                         \
   gnu/packages/pem.scm                         \
@@ -180,6 +200,7 @@ GNU_SYSTEM_MODULES =                                \
   gnu/packages/pth.scm                         \
   gnu/packages/pulseaudio.scm                  \
   gnu/packages/pretty-print.scm                        \
+  gnu/packages/protobuf.scm                    \
   gnu/packages/python.scm                      \
   gnu/packages/qemu.scm                                \
   gnu/packages/qt.scm                          \
@@ -187,6 +208,7 @@ GNU_SYSTEM_MODULES =                                \
   gnu/packages/rdf.scm                         \
   gnu/packages/readline.scm                    \
   gnu/packages/recutils.scm                    \
+  gnu/packages/rrdtool.scm                     \
   gnu/packages/rsync.scm                       \
   gnu/packages/rush.scm                                \
   gnu/packages/samba.scm                       \
@@ -205,6 +227,7 @@ GNU_SYSTEM_MODULES =                                \
   gnu/packages/swig.scm                                \
   gnu/packages/tcl.scm                         \
   gnu/packages/tcsh.scm                                \
+  gnu/packages/telephony.scm                   \
   gnu/packages/texinfo.scm                     \
   gnu/packages/texlive.scm                     \
   gnu/packages/time.scm                                \
@@ -218,6 +241,7 @@ GNU_SYSTEM_MODULES =                                \
   gnu/packages/video.scm                       \
   gnu/packages/vim.scm                         \
   gnu/packages/vpn.scm                         \
+  gnu/packages/vtk.scm                         \
   gnu/packages/w3m.scm                         \
   gnu/packages/wdiff.scm                       \
   gnu/packages/web.scm                         \
@@ -234,13 +258,18 @@ GNU_SYSTEM_MODULES =                              \
   gnu/packages/zip.scm                         \
                                                \
   gnu/services.scm                             \
+  gnu/services/avahi.scm                       \
   gnu/services/base.scm                                \
+  gnu/services/dbus.scm                                \
   gnu/services/dmd.scm                         \
   gnu/services/networking.scm                  \
+  gnu/services/ssh.scm                         \
   gnu/services/xorg.scm                                \
                                                \
   gnu/system.scm                               \
+  gnu/system/file-systems.scm                  \
   gnu/system/grub.scm                          \
+  gnu/system/install.scm                       \
   gnu/system/linux.scm                         \
   gnu/system/linux-initrd.scm                  \
   gnu/system/shadow.scm                                \
@@ -252,32 +281,35 @@ dist_patch_DATA =                                         \
   gnu/packages/patches/apr-skip-getservbyname-test.patch       \
   gnu/packages/patches/automake-skip-amhello-tests.patch       \
   gnu/packages/patches/avahi-localstatedir.patch               \
+  gnu/packages/patches/avrdude-fix-libusb.patch                        \
   gnu/packages/patches/bigloo-gc-shebangs.patch                        \
   gnu/packages/patches/binutils-ld-new-dtags.patch             \
   gnu/packages/patches/binutils-loongson-workaround.patch      \
-  gnu/packages/patches/bitlbee-fix-tests.patch                 \
-  gnu/packages/patches/bitlbee-memset-fix.patch                        \
+  gnu/packages/patches/ccache-stdc-predef-test.patch           \
   gnu/packages/patches/cdparanoia-fpic.patch                   \
+  gnu/packages/patches/clucene-pkgconfig.patch                 \
   gnu/packages/patches/cmake-fix-tests.patch                   \
   gnu/packages/patches/coreutils-dummy-man.patch               \
-  gnu/packages/patches/coreutils-skip-nohup.patch              \
   gnu/packages/patches/cpio-gets-undeclared.patch              \
-  gnu/packages/patches/curl-fix-test172.patch                  \
+  gnu/packages/patches/cssc-gets-undeclared.patch               \
+  gnu/packages/patches/cssc-missing-include.patch               \
+  gnu/packages/patches/cursynth-wave-rand.patch                        \
   gnu/packages/patches/dbus-localstatedir.patch                        \
   gnu/packages/patches/diffutils-gets-undeclared.patch         \
-  gnu/packages/patches/dmd-getpw.patch                         \
-  gnu/packages/patches/dmd-tests-longer-sleeps.patch           \
+  gnu/packages/patches/doxygen-test.patch                      \
+  gnu/packages/patches/doxygen-tmake.patch                     \
   gnu/packages/patches/emacs-configure-sh.patch                        \
+  gnu/packages/patches/file-CVE-2014-3587.patch                        \
   gnu/packages/patches/findutils-absolute-paths.patch          \
-  gnu/packages/patches/flac-fix-memcmp-not-declared.patch      \
+  gnu/packages/patches/flashrom-use-libftdi1.patch             \
   gnu/packages/patches/flex-bison-tests.patch                  \
   gnu/packages/patches/gawk-shell.patch                                \
   gnu/packages/patches/gcc-cross-environment-variables.patch   \
   gnu/packages/patches/gd-mips64-deplibs-fix.patch             \
   gnu/packages/patches/glib-tests-desktop.patch                        \
   gnu/packages/patches/glib-tests-homedir.patch                        \
-  gnu/packages/patches/glib-tests-newnet.patch                 \
   gnu/packages/patches/glib-tests-prlimit.patch                        \
+  gnu/packages/patches/glib-tests-timer.patch                  \
   gnu/packages/patches/glibc-bootstrap-system.patch            \
   gnu/packages/patches/glibc-ldd-x86_64.patch                  \
   gnu/packages/patches/gnunet-fix-scheduler.patch              \
@@ -289,47 +321,65 @@ dist_patch_DATA =                                         \
   gnu/packages/patches/guile-1.8-cpp-4.5.patch                 \
   gnu/packages/patches/guile-default-utf8.patch                        \
   gnu/packages/patches/guile-linux-syscalls.patch              \
+  gnu/packages/patches/guile-ncurses-tests.patch               \
   gnu/packages/patches/guile-relocatable.patch                 \
   gnu/packages/patches/guix-test-networking.patch              \
   gnu/packages/patches/gtkglext-disable-disable-deprecated.patch \
-  gnu/packages/patches/gtkglext-remove-pangox-dependency.patch  \
   gnu/packages/patches/hop-bigloo-4.0b.patch                   \
+  gnu/packages/patches/icu4c-test-date-format.patch            \
   gnu/packages/patches/inkscape-stray-comma.patch               \
+  gnu/packages/patches/kmod-module-directory.patch             \
+  gnu/packages/patches/libbonobo-activation-test-race.patch    \
   gnu/packages/patches/libevent-dns-tests.patch                        \
-  gnu/packages/patches/libffi-mips-n32-fix.patch               \
   gnu/packages/patches/liboop-mips64-deplibs-fix.patch         \
   gnu/packages/patches/libmad-mips-newgcc.patch                        \
   gnu/packages/patches/libtheora-config-guess.patch            \
   gnu/packages/patches/libtool-skip-tests.patch                        \
   gnu/packages/patches/libtool-skip-tests-for-mips.patch       \
   gnu/packages/patches/libssh-CVE-2014-0017.patch              \
+  gnu/packages/patches/lm-sensors-hwmon-attrs.patch            \
   gnu/packages/patches/luit-posix.patch                                \
   gnu/packages/patches/m4-gets-undeclared.patch                        \
   gnu/packages/patches/m4-readlink-EINVAL.patch                        \
   gnu/packages/patches/make-impure-dirs.patch                  \
   gnu/packages/patches/mc-fix-ncurses-build.patch              \
   gnu/packages/patches/mcron-install.patch                     \
+  gnu/packages/patches/mhash-keygen-test-segfault.patch                \
   gnu/packages/patches/mit-krb5-init-fix.patch                 \
   gnu/packages/patches/mpc123-initialize-ao.patch              \
+  gnu/packages/patches/module-init-tools-moduledir.patch       \
+  gnu/packages/patches/orpheus-cast-errors-and-includes.patch  \
   gnu/packages/patches/patchelf-page-size.patch                        \
+  gnu/packages/patches/patchutils-xfail-gendiff-tests.patch    \
   gnu/packages/patches/perl-no-sys-dirs.patch                  \
+  gnu/packages/patches/perl-tk-x11-discover.patch              \
+  gnu/packages/patches/petsc-fix-threadcomm.patch              \
+  gnu/packages/patches/pingus-sdl-libs-config.patch            \
   gnu/packages/patches/plotutils-libpng-jmpbuf.patch           \
   gnu/packages/patches/procps-make-3.82.patch                  \
+  gnu/packages/patches/pybugz-encode-error.patch               \
+  gnu/packages/patches/pybugz-stty.patch                       \
   gnu/packages/patches/python-fix-tests.patch                  \
-  gnu/packages/patches/qemu-make-4.0.patch                     \
-  gnu/packages/patches/qemu-multiple-smb-shares.patch          \
+  gnu/packages/patches/python-libffi-mips-n32-fix.patch                \
   gnu/packages/patches/qt4-tests.patch                         \
   gnu/packages/patches/ratpoison-shell.patch                   \
   gnu/packages/patches/readline-link-ncurses.patch             \
   gnu/packages/patches/ripperx-libm.patch                      \
   gnu/packages/patches/scheme48-tests.patch                    \
+  gnu/packages/patches/scotch-test-threading.patch             \
   gnu/packages/patches/slim-session.patch                      \
   gnu/packages/patches/slim-config.patch                       \
   gnu/packages/patches/slim-sigusr1.patch                      \
+  gnu/packages/patches/soprano-find-clucene.patch              \
   gnu/packages/patches/source-highlight-regexrange-test.patch  \
   gnu/packages/patches/sqlite-large-page-size-fix.patch                \
+  gnu/packages/patches/superlu-dist-scotchmetis.patch          \
   gnu/packages/patches/tcsh-fix-autotest.patch                 \
   gnu/packages/patches/teckit-cstdio.patch                     \
+  gnu/packages/patches/texi2html-document-encoding.patch       \
+  gnu/packages/patches/texi2html-i18n.patch                    \
+  gnu/packages/patches/udev-gir-libtool.patch                  \
+  gnu/packages/patches/util-linux-perl.patch                   \
   gnu/packages/patches/valgrind-glibc.patch                    \
   gnu/packages/patches/vpnc-script.patch                       \
   gnu/packages/patches/w3m-fix-compile.patch                   \