(base32
"1a8mi70x79a691r40yiw684jkg1mr9n8agkxlcksxcnrdybs9c0x"))))
(build-system r-build-system)
- (inputs `(("libjpeg" ,libjpeg)))
+ (inputs `(("libjpeg" ,libjpeg-turbo)))
(home-page "https://www.rforge.net/jpeg/")
(synopsis "Read and write JPEG images with R")
(description "This package provides a way to read, write and display
(define-public r-pkgbuild
(package
(name "r-pkgbuild")
- (version "1.0.6")
+ (version "1.0.7")
(source
(origin
(method url-fetch)
(uri (cran-uri "pkgbuild" version))
(sha256
- (base32 "0xnlz6ivhkbmncg9hfw5p69lm4rjy3wn5lyxmygxyf4rrfnnqwxx"))))
+ (base32 "0wd9678yp6yi73n92f58wi9jc19gdq5cmbj65l6pifh2haikifr9"))))
(build-system r-build-system)
(propagated-inputs
`(("r-callr" ,r-callr)
(define-public r-proxy
(package
(name "r-proxy")
- (version "0.4-23")
+ (version "0.4-24")
(source
(origin
(method url-fetch)
(uri (cran-uri "proxy" version))
(sha256
(base32
- "17b6qfllqrhzrxqgx7dccffgybnkcria5a68ap5ly3plg04ypm4x"))))
+ "0z4wdnpv5x135nssxnmkkba7fivd5xgbpaabqjkl2na76vq9pzwc"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/proxy")
(synopsis "Distance and similarity measures")
(define-public r-broom
(package
(name "r-broom")
- (version "0.5.5")
+ (version "0.5.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "broom" version))
(sha256
(base32
- "0n7zd64263kfavdi28rl2bxrsa00c3m4vjhhjdrfwvvmrcxj39fx"))))
+ "0da3jsb02xckrk6alznicn6l5lnyvdhc64qklyarnd77miqgc1hb"))))
(build-system r-build-system)
(propagated-inputs
`(("r-backports" ,r-backports)
("r-stringr" ,r-stringr)
("r-tibble" ,r-tibble)
("r-tidyr" ,r-tidyr)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/tidyverse/broom")
(synopsis "Convert statistical analysis objects into tidy data frames")
(description
(define-public r-tsp
(package
(name "r-tsp")
- (version "1.1-9")
+ (version "1.1-10")
(source
(origin
(method url-fetch)
(uri (cran-uri "TSP" version))
(sha256
(base32
- "183m6crb0dv17llj86059n3hbgsahbhfcqlx0ijdzkssg11i1cy7"))))
+ "0z1v6m0vqjzxc4az3zyjaayygx0jr3mdmc56jjd421iqh0b9z5s4"))))
(properties `((upstream-name . "TSP")))
(build-system r-build-system)
(propagated-inputs `(("r-foreach" ,r-foreach)))
(define-public r-tinytex
(package
(name "r-tinytex")
- (version "0.21")
+ (version "0.22")
(source
(origin
(method url-fetch)
(uri (cran-uri "tinytex" version))
(sha256
(base32
- "088zzc2v0izbcs45p19v547pi78vkr08ibpvvi1g9bkbya4x3mq9"))))
+ "0s9f62v3ps5f8903ar6kxlf1z3b4v78vlw1nb05bq55dgj8brg3b"))))
(build-system r-build-system)
(propagated-inputs
`(("r-xfun" ,r-xfun)))
(define-public r-insight
(package
(name "r-insight")
- (version "0.8.2")
+ (version "0.8.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "insight" version))
(sha256
(base32
- "0fjf7dwpv1a7qfbzixppg348z1ksq19kdjm08vcb2am7w0k3plcj"))))
+ "0lm5a4r368mq1pwmxjk2xnz25lb9j4v7mdkl1bahk2alklxgb8yj"))))
(build-system r-build-system)
(native-inputs
`(("r-knitr" ,r-knitr)))
(define-public r-rootsolve
(package
(name "r-rootsolve")
- (version "1.8.2")
+ (version "1.8.2.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "rootSolve" version))
(sha256
(base32
- "0rj7c4zcrzgz7sb0vgvh7swpfafnw4040cxp7ypas3s8fnihn54l"))))
+ "0c9hhgq1pgqdg80a6n2ssfbj5nyaf97y4iiya7j7l6b34qc53128"))))
(properties `((upstream-name . "rootSolve")))
(build-system r-build-system)
(native-inputs `(("gfortran" ,gfortran)))
(define-public r-raster
(package
(name "r-raster")
- (version "3.0-12")
+ (version "3.1-5")
(source
(origin
(method url-fetch)
(uri (cran-uri "raster" version))
(sha256
(base32
- "0rrbsigkqxsdic8fly6nrsc79zsliwvr1x2b4xqpl9d34vr50dvg"))))
+ "010sq00ijpmwac280ip9rryw0pxk0al8g675v2lc9rdrbgaj4rnv"))))
(build-system r-build-system)
(propagated-inputs
`(("r-rcpp" ,r-rcpp)
(define-public r-emmeans
(package
(name "r-emmeans")
- (version "1.4.5")
+ (version "1.4.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "emmeans" version))
(sha256
(base32
- "10fmvmd6q4zjr6b18hhc85mwrzv778qzj6lwl9kbs2fsfvsgw7mm"))))
+ "0mxk7ghlv4r6sna4897q1la2xgyn1dw3r9srhm9x4h5l4701avfa"))))
(build-system r-build-system)
(propagated-inputs
`(("r-estimability" ,r-estimability)
("r-numderiv" ,r-numderiv)
("r-plyr" ,r-plyr)
("r-xtable" ,r-xtable)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/rvlenth/emmeans")
(synopsis "Estimated marginal means, aka least-squares means")
(description
(define-public r-bayestestr
(package
(name "r-bayestestr")
- (version "0.5.3")
+ (version "0.6.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "bayestestR" version))
(sha256
(base32
- "1q24qh5p6bz4nbf4546kckh7d518x5pm1yhhbc8fwcnbca4kgqjz"))))
+ "0s7wdmk8avgaqk2b7fcf4bsh13isrkl1q4y7z2y8jhdagxxxnzd1"))))
(properties `((upstream-name . "bayestestR")))
(build-system r-build-system)
(propagated-inputs
(define-public r-ggeffects
(package
(name "r-ggeffects")
- (version "0.14.2")
+ (version "0.14.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "ggeffects" version))
(sha256
(base32
- "1y3yfb07jrr6vkc8hk6rp52l70dj7042jvqgjzllslzy7hx2jhyw"))))
+ "06p80bgjhjknzlb4vs4n41i9n9vv5agncakl9f92zkaahgyzd6sd"))))
(build-system r-build-system)
(propagated-inputs
`(("r-insight" ,r-insight)
(define-public r-usethis
(package
(name "r-usethis")
- (version "1.6.0")
+ (version "1.6.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "usethis" version))
(sha256
(base32
- "12iyimqyza752anj29wpfisl8nz5r25kfcqbssybg24nb4wyy146"))))
+ "0vwxsnq615mwc706a4a71gyy0hmvnllbh249gzm7vl3ym5cr0cv0"))))
(build-system r-build-system)
(propagated-inputs
`(("r-cli" ,r-cli)
(define-public r-rgl
(package
(name "r-rgl")
- (version "0.100.50")
+ (version "0.100.54")
(source
(origin
(method url-fetch)
(uri (cran-uri "rgl" version))
(sha256
(base32
- "165p932ml7dpjkm41zc47p5cdxar69il0m5yvg0avi8q01vr17ay"))))
+ "1mgs2d8igmcdzzymfwbqdrypmaidd4pra5n5gnhsn9pm6pqzidqp"))))
(build-system r-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
(define-public r-arm
(package
(name "r-arm")
- (version "1.10-1")
+ (version "1.11-1")
(source
(origin
(method url-fetch)
(uri (cran-uri "arm" version))
(sha256
(base32
- "0vvp90jygajd6ydky57z66wqjq9msfbl88irj5jbsray574mh4bg"))))
+ "0i2lnm09bqy1qw0ms5pw0rzw196xmnk5dxha3g8lc58lqpldp0kv"))))
(build-system r-build-system)
(propagated-inputs
`(("r-abind" ,r-abind)
(build-system r-build-system)
(inputs
`(("libtiff" ,libtiff)
- ("libjpeg" ,libjpeg)
+ ("libjpeg" ,libjpeg-turbo)
("zlib" ,zlib)))
(home-page "https://www.rforge.net/tiff/")
(synopsis "Read and write TIFF images")
(define-public r-protviz
(package
(name "r-protviz")
- (version "0.6.3")
+ (version "0.6.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "protViz" version))
(sha256
(base32
- "1ldciqh3f43xr9663yyhd9r6qwrg4c4vmkprlcancbnd460wakg7"))))
+ "1qq9bf4485x8cviry9fmhnv4hw9aw657w134003myzcv42c4pml6"))))
(properties `((upstream-name . "protViz")))
(build-system r-build-system)
(propagated-inputs `(("r-rcpp" ,r-rcpp)))
(define-public r-etm
(package
(name "r-etm")
- (version "1.0.5.1")
+ (version "1.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "etm" version))
(sha256
(base32
- "0m41pm277sd50pharigcqzr1a2g92wnmdf6fcab6fx16ia2fzrm7"))))
+ "02yvh473l5qajaymhsxwb235a9r7q3nsig9a9mrfca68xih8yvgd"))))
(build-system r-build-system)
(propagated-inputs
`(("r-data-table" ,r-data-table)
(define-public r-future
(package
(name "r-future")
- (version "1.16.0")
+ (version "1.17.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "future" version))
(sha256
(base32
- "1xaqh0b2knf5bp23mc0kriq0iqhqna31q3b7d960piqjhzrb03dm"))))
+ "0d4y7gwcgqx2z0y6h5bh4lrz0m7b0inii5cjcq0kk8za762bi8rg"))))
(build-system r-build-system)
(propagated-inputs
`(("r-digest" ,r-digest)
(define-public r-future-apply
(package
(name "r-future-apply")
- (version "1.4.0")
+ (version "1.5.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "future.apply" version))
(sha256
(base32
- "1kgq6dv96hdy35kysqkn606nj7s9dp4ibgpm6n46gqhc5n75lzkk"))))
+ "095a681ngbwbp7v53ladwya7ar8fgwnlgr3r1yklf3vdxwd54xll"))))
(properties `((upstream-name . "future.apply")))
(build-system r-build-system)
(propagated-inputs
(define-public r-sf
(package
(name "r-sf")
- (version "0.9-1")
+ (version "0.9-2")
(source
(origin
(method url-fetch)
(uri (cran-uri "sf" version))
(sha256
(base32
- "1qghrskqwwlwxmmvkv7knhlr1a32ngyimycasy5gfazgviljsfn4"))))
+ "01xplgy5nlwy3ajfch4h1ssa1xhm7q0jzscpz04dmvgqfzwhhdfh"))))
(build-system r-build-system)
(inputs
`(("gdal" ,gdal)
(define-public r-optparse
(package
(name "r-optparse")
- (version "1.6.4")
+ (version "1.6.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "optparse" version))
(sha256
(base32
- "0wyrc42ja3ab5szx46zmz8lm7vzfqxkjca0m0sms8g9hqbmmay6d"))))
+ "1l301dy3gc8pn7j00awcjh41wmc1ks9kswak255kbsa6f54rsxsi"))))
(build-system r-build-system)
(propagated-inputs
`(("r-getopt" ,r-getopt)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/trevorld/optparse")
(synopsis "Command line option parser")
(description
(define-public r-rex
(package
(name "r-rex")
- (version "1.1.2")
+ (version "1.2.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "rex" version))
(sha256
(base32
- "0alsadgjgass3wr8y5d247j12qqzg454sc84vpskclrkmz778g5x"))))
+ "0m7bq8db3m5dhf01rw7xc7xy1ciq3m7dfgsl80p8cy4h8vqr3d06"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lazyeval" ,r-lazyeval)
- ("r-magrittr" ,r-magrittr)))
+ `(("r-lazyeval" ,r-lazyeval)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/kevinushey/rex")
(synopsis "Friendly regular expressions")
(description
(define-public r-dalex
(package
(name "r-dalex")
- (version "1.0.1")
+ (version "1.2.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "DALEX" version))
(sha256
(base32
- "1jbyn57vn6d281a5y15h5d8ljin8cdb9lr7lbgggc950blyfv4g0"))))
+ "0lx8nasm1zgh1ckz8nw3ysp6xjv3dsj39hzhr6k3xhh6i8pm9rxk"))))
(properties `((upstream-name . "DALEX")))
(build-system r-build-system)
- (propagated-inputs `(("r-ggplot2" ,r-ggplot2)))
+ (propagated-inputs
+ `(("r-ggplot2" ,r-ggplot2)
+ ("r-ibreakdown" ,r-ibreakdown)
+ ("r-ingredients" ,r-ingredients)))
(home-page "https://pbiecek.github.io/DALEX/")
(synopsis "Descriptive machine learning explanations")
(description
(define-public r-ggfortify
(package
(name "r-ggfortify")
- (version "0.4.9")
+ (version "0.4.10")
(source
(origin
(method url-fetch)
(uri (cran-uri "ggfortify" version))
(sha256
(base32
- "1p6knrbyaynaqwd939w09hpf1zz1gn95cb46sfgppl8l98krb2h5"))))
+ "0wmcwp63h90v3f00ixszvis4z28im621jickvc0wgi6qvjvnayq0"))))
(build-system r-build-system)
(propagated-inputs
`(("r-dplyr" ,r-dplyr)
(define-public r-systemfonts
(package
(name "r-systemfonts")
- (version "0.1.1")
+ (version "0.2.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "systemfonts" version))
(sha256
(base32
- "0m0ljid683xcam2f14x7k2zv1yx4npac38a3gfv11vhxfbnpgp0z"))))
+ "0dna00xai0pw76b4830yy4r5j1hq7f7kla67v0iz39cjm4rq4ygq"))))
(properties `((upstream-name . "systemfonts")))
(build-system r-build-system)
(inputs
`(("fontconfig" ,fontconfig)
- ("freetype" ,freetype)
("zlib" ,zlib)))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ `(("pkg-config" ,pkg-config)
+ ("r-knitr" ,r-knitr)))
(home-page "https://github.com/r-lib/systemfonts")
(synopsis "System native font finding")
(description
(define-public r-graphlayouts
(package
(name "r-graphlayouts")
- (version "0.6.0")
+ (version "0.7.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "graphlayouts" version))
(sha256
(base32
- "1la016m37kp79zk8p1yx9kaha8y6d4w52w39h0mzv1mfsi6d75w0"))))
+ "17lc75k8i3c696hfj44zj7j1a5sb0nap8spc5r98v7vd6xh4nii0"))))
(properties `((upstream-name . "graphlayouts")))
(build-system r-build-system)
(propagated-inputs
included.")
(license license:gpl3)))
+(define-public r-qgam
+ (package
+ (name "r-qgam")
+ (version "1.3.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "qgam" version))
+ (sha256
+ (base32
+ "0lks2cj0p7irp1i01756v1l7i26d7alax1fbkc20qd6wpz840fi7"))))
+ (properties `((upstream-name . "qgam")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-doparallel" ,r-doparallel)
+ ("r-mgcv" ,r-mgcv)
+ ("r-plyr" ,r-plyr)
+ ("r-shiny" ,r-shiny)))
+ (native-inputs `(("r-knitr" ,r-knitr)))
+ (home-page "https://cran.r-project.org/web/packages/qgam/")
+ (synopsis "Smooth additive quantile regression models")
+ (description
+ "This package provides smooth additive quantile regression models, fitted
+using the methods of Fasiolo et al. (2017). Differently from @code{quantreg},
+the smoothing parameters are estimated automatically by marginal loss
+minimization, while the regression coefficients are estimated using either
+PIRLS or Newton algorithm. The learning rate is determined so that the
+Bayesian credible intervals of the estimated effects have approximately the
+correct coverage. The main function is @code{qgam()} which is similar to
+@code{gam()} in the @code{mgcv} package, but fits non-parametric quantile
+regression models.")
+ (license license:gpl2+)))
+
(define-public r-abtest
(package
(name "r-abtest")
- (version "0.2.0")
+ (version "0.2.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "abtest" version))
(sha256
(base32
- "1ky3cf827kj24bhcpk00v5zl5jdkii1gca0x81ay1cjkzfispgws"))))
+ "1zfd13d7dplawk24dbdr1ka8cbdp5w6sxb0zlm7k4dhvn6ksi8h0"))))
(properties `((upstream-name . "abtest")))
(build-system r-build-system)
(propagated-inputs
`(("r-matrix" ,r-matrix)
("r-mvtnorm" ,r-mvtnorm)
("r-plotrix" ,r-plotrix)
+ ("r-qgam" ,r-qgam)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-rcpp" ,r-rcpp)
("r-sn" ,r-sn)
- ("r-truncnorm" ,r-truncnorm)
- ("r-vgam" ,r-vgam)))
+ ("r-truncnorm" ,r-truncnorm)))
(home-page "https://cran.r-project.org/web/packages/abtest/")
(synopsis "Bayesian A/B testing")
(description
(define-public r-fda
(package
(name "r-fda")
- (version "2.4.8.1")
+ (version "5.1.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "fda" version))
(sha256
(base32
- "0g50kj1dx7zarjv0lgwyzd2c7bv6di7nkndmywday5vjywgl8m7a"))))
+ "0js4ggl3aiwsqk6npwz72yhcznkb63smddds24ngf6a0p8yp5p2x"))))
(properties `((upstream-name . "fda")))
(build-system r-build-system)
(propagated-inputs
(properties `((upstream-name . "readbitmap")))
(build-system r-build-system)
(inputs
- `(("libjpeg" ,libjpeg)
+ `(("libjpeg" ,libjpeg-turbo)
("libpng" ,libpng)))
(propagated-inputs
`(("r-bmp" ,r-bmp)
(define-public r-univoutl
(package
(name "r-univoutl")
- (version "0.1-5")
+ (version "0.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "univOutl" version))
(sha256
(base32
- "193wrpkvgmlrx43nag8w3ivrlqm37nm6g86wcvd3bgw3hchs70gi"))))
+ "0rlc3w7cx2hfxacpjs9kmjzv5p8v9wxnlpxi3rh276wiy5zdr91v"))))
(properties `((upstream-name . "univOutl")))
(build-system r-build-system)
(propagated-inputs
(define-public r-stopwords
(package
(name "r-stopwords")
- (version "1.0")
+ (version "2.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "stopwords" version))
(sha256
(base32
- "1nmi0bpd0c238g5b8ch1v034m5ng9llhs519cgxdrj3sh9fplwlv"))))
+ "155g00ansyqfpp1mzd2q6mn0k214xinf78nww2368h24kz761jjw"))))
(properties `((upstream-name . "stopwords")))
(build-system r-build-system)
- (propagated-inputs `(("r-isocodes" ,r-isocodes)))
+ (propagated-inputs
+ `(("r-desc" ,r-desc)
+ ("r-isocodes" ,r-isocodes)
+ ("r-usethis" ,r-usethis)))
(home-page "https://github.com/quanteda/stopwords")
(synopsis "Multilingual stopword lists")
(description
(define-public r-topicmodels
(package
(name "r-topicmodels")
- (version "0.2-9")
+ (version "0.2-11")
(source
(origin
(method url-fetch)
(uri (cran-uri "topicmodels" version))
(sha256
(base32
- "1757r5x8bsl4dk106xg6481mvdkdz9vwg87n7rpbvdkavsvhyxs0"))))
+ "0jmp6wva99y0w40cfw7b0faylndhjam097x36ilc4vmyczcv89lw"))))
(properties `((upstream-name . "topicmodels")))
(build-system r-build-system)
(native-inputs
(define-public r-kutils
(package
(name "r-kutils")
- (version "1.69")
+ (version "1.70")
(source
(origin
(method url-fetch)
(uri (cran-uri "kutils" version))
(sha256
(base32
- "12pg26a85h0jxlfcyai68dbh4bq1gnq8v1ngi8k9qvafbrpc6gx8"))))
+ "06jk66wbq3jmdf2jdhqns6r3yk36l2x7c907x977zv80sqxa1l37"))))
(properties `((upstream-name . "kutils")))
(build-system r-build-system)
(propagated-inputs
`(("r-foreign" ,r-foreign)
- ("r-lavaan" ,r-lavaan)
("r-openxlsx" ,r-openxlsx)
("r-plyr" ,r-plyr)
("r-runit" ,r-runit)
Archive Toolkit. Rxnat uses the XNAT REST API to perform data queries and
download images.")
(license license:gpl2)))
+
+(define-public r-rserve
+ (package
+ (name "r-rserve")
+ (version "1.8-6")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "http://www.rforge.net/Rserve/snapshot/Rserve_"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "017kkzv9lxlz9qhg3gprrf1wcyflxrif6wjk27x9b4bdzylw6bsx"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-checkmate" ,r-checkmate)
+ ("r-mime" ,r-mime)
+ ("r-jsonlite" ,r-jsonlite)
+ ("r-knitr" ,r-knitr)
+ ("r-r6" ,r-r6)
+ ("r-rcpp" ,r-rcpp)
+ ("r-uuid" ,r-uuid)))
+ (inputs
+ `(("openssl" ,openssl)
+ ("zlib" ,zlib)))
+ (home-page "https://github.com/s-u/Rserve")
+ (synopsis
+ "Server providing access to R from many languages and systems")
+ (description
+ "Rserve acts as a socket server (TCP/IP or local sockets) which allows
+binary requests to be sent to R. Every connection has a separate workspace
+and working directory. Client-side implementations are available for popular
+languages such as C/C++ and Java, allowing any application to use facilities
+of R without the need of linking to R code. Rserve supports remote
+connection, user authentication and file transfer. A simple R client is
+included in this package as well.")
+ (license license:gpl2)))