;;; Copyright © 2016, 2017 ng0 <ng0@n0.is>
;;; Copyright © 2016 Dylan Jeffers <sapientech@sapientech@openmailbox.org>
;;; Copyright © 2016 David Craven <david@craven.ch>
-;;; Copyright © 2016, 2017, 2018, 2019 Marius Bakke <mbakke@fastmail.com>
+;;; Copyright © 2016, 2017, 2018, 2019, 2020 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2016, 2017 Stefan Reichör <stefan@xsteve.at>
;;; Copyright © 2016 Dylan Jeffers <sapientech@sapientech@openmailbox.org>
;;; Copyright © 2016, 2017, 2019 Alex Vong <alexvong1995@gmail.com>
;;; Copyright © 2018 Mathieu Lirzin <mthl@gnu.org>
;;; Copyright © 2018 Adam Massmann <massmannak@gmail.com>
;;; Copyright © 2016, 2018 Tomáš Čech <sleep_walker@gnu.org>
-;;; Copyright © 2018, 2019 Nicolas Goaziou <mail@nicolasgoaziou.fr>
+;;; Copyright © 2018, 2019, 2020 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2018 Oleg Pykhalov <go.wigust@gmail.com>
;;; Copyright © 2018, 2019 Clément Lassieur <clement@lassieur.org>
;;; Copyright © 2018, 2019 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2019 Wiktor Żelazny <wzelazny@vurv.cz>
;;; Copyright © 2019 Tanguy Le Carrour <tanguy@bioneland.org>
;;; Copyright © 2019 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
+;;; Copyright © 2020 Riku Viitanen <riku.viitanen@protonmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
#:use-module (gnu packages icu4c)
#:use-module (gnu packages image)
#:use-module (gnu packages imagemagick)
+ #:use-module (gnu packages kerberos)
#:use-module (gnu packages libevent)
#:use-module (gnu packages libffi)
#:use-module (gnu packages linux)
(propagated-inputs `(("numpy" ,python-numpy)))
(inputs
`(("hdf4" ,hdf4)
- ("libjpeg" ,libjpeg)
+ ("libjpeg" ,libjpeg-turbo)
("zlib" ,zlib)))
(arguments
`(#:phases
;; Only setup.py is gpl3+, everything else is apache 2.0 licensed.
(license (list license:asl2.0 license:gpl3+))))
+(define-public python-anytree
+ (package
+ (name "python-anytree")
+ (version "2.8.0")
+ (source (origin
+ (method url-fetch)
+ (uri (pypi-uri "anytree" version))
+ (sha256
+ (base32
+ "1aycpc387wqz7h9w2p53qxn43qsh3m6by6ak4kkc66x9aprr63rz"))))
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-six" ,python-six)))
+ (native-inputs
+ `(;; For tests.
+ ("graphviz" ,graphviz) ;for 'dot'
+ ("python-nose" ,python-nose)))
+ (home-page "https://github.com/c0fec0de/anytree")
+ (synopsis "Lightweight tree data library")
+ (description
+ "@code{anytree} is a simple, lightweight, and extensible tree data
+structure for Python.")
+ (license license:asl2.0)))
+
(define-public python-docutils
(package
(name "python-docutils")
(define-public python-pygments
(package
(name "python-pygments")
- (version "2.4.2")
+ (version "2.5.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Pygments" version))
(sha256
(base32
- "15v2sqm5g12bqa0c7wikfh9ck2nl97ayizy1hpqhmws5gqalq748"))))
+ "1zmhnswy0wxfn0xprs9aqsvx2c3kmzfn2wx14q8cv3vpkxdamj4q"))))
(build-system python-build-system)
(arguments
;; FIXME: Tests require sphinx, which depends on this.
(define-public python-language-server
(package
(name "python-language-server")
- (version "0.31.4")
+ (version "0.31.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-language-server" version))
(sha256
(base32
- "1nrs56jpx7dvghaas0kc5k9lxas5vr3awj3k87p4akki43nsblb8"))))
+ "0cqrffd5272p2hifa35rf1h1g6dss741jmjkwa43jninifmbz0df"))))
(build-system python-build-system)
(propagated-inputs
`(("python-pluggy" ,python-pluggy)
(inputs
`(("freetype" ,freetype)
("lcms" ,lcms)
- ("libjpeg" ,libjpeg)
+ ("libjpeg" ,libjpeg-turbo)
("libtiff" ,libtiff)
("libwebp" ,libwebp)
("openjpeg" ,openjpeg)
older Python versions.")
(license license:expat)))
+(define-public python2-importlib-resources
+ (package
+ (name "python2-importlib-resources")
+ (version "1.0.2")
+ (source (origin
+ (method url-fetch)
+ (uri (pypi-uri "importlib_resources" version))
+ (sha256
+ (base32
+ "0y3hg12iby1qyaspnbisz4s4vxax7syikk3skznwqizqyv89y9yk"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:python ,python-2))
+ (native-inputs
+ `(("python-wheel" ,python2-wheel)))
+ (propagated-inputs
+ `(("python-pathlib2" ,python2-pathlib2)
+ ("python-typing" ,python2-typing)))
+ (home-page "https://gitlab.com/python-devs/importlib_resources")
+ (synopsis "Backport of @code{importlib.resources} from Python 3.7")
+ (description
+ "This package provides an implementation of @code{importlib.resources}
+for older versions of Python.")
+ (license license:asl2.0)))
+
(define-public python-importlib-metadata
(package
(name "python-importlib-metadata")
@code{pkg_resources} entry point API and metadata API. Along with
@code{importlib.resources} in Python 3.7 and newer, this can eliminate the
need to use the older and less efficient @code{pkg_resources} package.")
+ (properties `((python2-variant . ,(delay python2-importlib-metadata))))
(license license:asl2.0)))
+(define-public python2-importlib-metadata
+ (let ((base (package-with-python2 (strip-python2-variant
+ python-importlib-metadata))))
+ (package/inherit
+ base
+ (name "python2-importlib-metadata")
+ (propagated-inputs
+ `(("python-configparser" ,python2-configparser)
+ ("python-contextlib2" ,python2-contextlib2)
+ ("python-importlib-resources" ,python2-importlib-resources)
+ ("python-pathlib2" ,python2-pathlib2)
+ ,@(package-propagated-inputs base))))))
+
(define-public python-jaraco-packaging
(package
(name "python-jaraco-packaging")
(define-public python2-notify2
(package-with-python2 python-notify2))
-(define-public python-lxml
- (package
- (name "python-lxml")
- (version "4.4.2")
- (source
- (origin
- (method url-fetch)
- (uri (pypi-uri "lxml" version))
- (sha256
- (base32 "01nvb5j8vs9nk4z5s3250b1m22b4d08kffa36if3g1mdygdrvxpg"))))
- (build-system python-build-system)
- (arguments
- `(#:phases (modify-phases %standard-phases
- (replace 'check
- (lambda _
- (invoke "make" "test"))))))
- (inputs
- `(("libxml2" ,libxml2)
- ("libxslt" ,libxslt)))
- (home-page "https://lxml.de/")
- (synopsis "Python XML processing library")
- (description
- "The lxml XML toolkit is a Pythonic binding for the C libraries
-libxml2 and libxslt.")
- (license license:bsd-3))) ; and a few more, see LICENSES.txt
-
-(define-public python2-lxml
- (package-with-python2 python-lxml))
-
;; beautifulsoup4 has a totally different namespace than 3.x,
;; and pypi seems to put it under its own name, so I guess we should too
(define-public python-beautifulsoup4
(define-public python-fonttools
(package
(name "python-fonttools")
- (version "3.38.0")
+ (version "4.2.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "fonttools" version ".zip"))
(sha256
(base32
- "12ripk3s7skgxr1bs9r8n13r94ym3s8iir7ivfixls9fa4dabmlh"))))
+ "012qqspnwdl4vy8qgzzpfglkk5dgzxiw0fak2jq74ngygvz3vfv6"))))
(build-system python-build-system)
(native-inputs
`(("unzip" ,unzip)
from an XML-based format.")
(license license:expat)))
+;; Fonttools 4.x dropped support for Python 2, so stick with 3.x here.
(define-public python2-fonttools
- (package-with-python2 python-fonttools))
+ (let ((base (package-with-python2 (strip-python2-variant python-fonttools))))
+ (package/inherit
+ base
+ (version "3.44.0")
+ (source (origin
+ (method url-fetch)
+ (uri (pypi-uri "fonttools" version ".zip"))
+ (sha256
+ (base32
+ "0v6399g755f2hn1ry62i5b6gdinf2fpx2966v3bxh6bjw1accb5p")))))))
(define-public python-ly
(package
(define-public python-objgraph
(package
(name "python-objgraph")
- (version "3.4.0")
+ (version "3.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "objgraph" version))
(sha256
(base32
- "184m09am5gpbqfaiy7l0hwh476mczbrly1dffs0rw2p1d1i2q32a"))))
+ "19qmqsh984zq1rzzjy4vqnmviaqnymcyl8h7z99pnicbgwnm2adz"))))
(build-system python-build-system)
(propagated-inputs
`(("python-graphviz" ,python-graphviz)))
graphviz.")
(license license:expat)))
+(define-public python2-objgraph
+ (package-with-python2 python-objgraph))
+
(define-public python-gevent
(package
(name "python-gevent")
("python-html5lib" ,python-html5lib)
("python-jsonschema" ,python-jsonschema)
("python-msgpack" ,python-msgpack)
- ("python-pathlib2" ,python-pathlib2)
("python-pkginfo" ,python-pkginfo)
("python-pyparsing" ,python-pyparsing)
("python-pyrsistent" ,python-pyrsistent)
(origin
(method url-fetch)
(uri (pypi-uri "packaging" version))
+ ;; XXX: The URL in the patch file is wrong, it should be
+ ;; <https://github.com/pypa/packaging/pull/256>.
+ (patches (search-patches "python-packaging-test-arch.patch"))
(sha256
(base32
"1y2ip3a4ykkpgnwgn85j6hkspcl0cg3mzms97f40mk57vwqq67gy"))))
(description "Library for simple routing on OSM data")
(license license:gpl3+)))
-(define-public python-elementpath
- (package
- (name "python-elementpath")
- (version "1.2.0")
- (source
- (origin
- (method url-fetch)
- (uri (pypi-uri "elementpath" version))
- (sha256
- (base32
- "1syn2z543brab23dskh3fjd9pqvz6npqbcicrs2d88dbg26xl08p"))))
- (build-system python-build-system)
- (home-page
- "https://github.com/sissaschool/elementpath")
- (synopsis
- "XPath 1.0/2.0 parsers and selectors for ElementTree and lxml")
- (description
- "The proposal of this package is to provide XPath 1.0 and 2.0 selectors
-for Python's ElementTree XML data structures, both for the standard
-ElementTree library and for the @uref{http://lxml.de, lxml.etree} library.
-
-For lxml.etree this package can be useful for providing XPath 2.0 selectors,
-because lxml.etree already has it's own implementation of XPath 1.0.")
- (license license:expat)))
-
(define-public python-bibtexparser
(package
(name "python-bibtexparser")
functional combinators. Parser combinators are just higher-order functions
that take parsers as their arguments and return them as result values.")
(license license:expat)))
+
+(define-public python-speg
+ (package
+ (name "python-speg")
+ (version "0.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "speg" version ".zip"))
+ (sha256
+ (base32 "0w9y4jf4787dzhy6rvhwi0mpl0r8qkqmqmyv2hpwdpv8w53yzjqh"))))
+ (arguments
+ `(#:tests? #f)) ;FIXME: tests fail, not sure why
+ (native-inputs
+ `(("unzip" ,unzip)))
+ (build-system python-build-system)
+ (home-page "https://github.com/avakar/speg")
+ (synopsis "PEG-based parser interpreter with memoization")
+ (description "This package is a PEG-based parser and interpreter with
+memoization.")
+ (license license:expat)))
+
+(define-public python-cson
+ (package
+ (name "python-cson")
+ (version "0.8")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "cson" version))
+ (sha256
+ (base32 "00cyvigg4npbph39ghkg77xbxisa6plf75vii24igxfizik0337f"))))
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-speg" ,python-speg)))
+ (home-page "https://github.com/avakar/pycson")
+ (synopsis "Parser for Coffeescript Object Notation (CSON)")
+ (description "This package is a parser for Coffeescript Object
+Notation (CSON).")
+ (license license:expat)))
+
+(define-public python-asynctest
+ (package
+ (name "python-asynctest")
+ (version "0.13.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "asynctest" version))
+ (sha256
+ (base32
+ "1b3zsy7p84gag6q8ai2ylyrhx213qdk2h2zb6im3xn0m5n264y62"))))
+ (build-system python-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda _
+ (invoke "python" "-X" "dev" "-m" "unittest" "-v" "test")))
+ (add-after 'unpack 'disable-tests
+ (lambda* _
+ (substitute* "test/test_selector.py"
+ ;; XXX: This test fails for unknown reason inside the build
+ ;; environment.
+ (("def test_events_watched_outside_test_are_ignored")
+ "@unittest.skip('disabled by guix')
+ def test_events_watched_outside_test_are_ignored")))))))
+ (home-page "https://github.com/Martiusweb/asynctest")
+ (synopsis "Extension of unittest for testing asyncio libraries")
+ (description
+ "The package asynctest is built on top of the standard unittest module
+and cuts down boilerplate code when testing libraries for asyncio.")
+ (license license:asl2.0)))
+
+(define-public python-aionotify
+ (package
+ (name "python-aionotify")
+ (version "0.2.0")
+ (source
+ (origin
+ ;; Source tarball on PyPi lacks tests
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/rbarrois/aionotify")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "1sk9i8czxgsbrswsf1nlb4c82vgnlzi8zrvrxdip92w2z8hqh43y"))))
+ (build-system python-build-system)
+ (native-inputs `(("python-asynctest" ,python-asynctest)))
+ (home-page "https://github.com/rbarrois/aionotify")
+ (synopsis "Asyncio-powered inotify library")
+ (description
+ "@code{aionotify} is a simple, asyncio-based inotify library.")
+ (license license:bsd-3)))
+
+(define-public python-forbiddenfruit
+ (package
+ (name "python-forbiddenfruit")
+ (version "0.1.3")
+ (source
+ (origin
+ ;; Source tarball on PyPi lacks Makefile that builds and runs tests
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/clarete/forbiddenfruit")
+ (commit version)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "1fp2xvdqpi910j9r3q68x38phpxbm700gjdi2m2j5gs91xdnyyh2"))))
+ (build-system python-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda _
+ (invoke "make" "SKIP_DEPS=1"))))))
+ (native-inputs
+ `(("python-nose" ,python-nose)
+ ("python-coverage" ,python-coverage)))
+ (home-page "https://github.com/clarete/forbiddenfruit")
+ (synopsis "Patch python built-in objects")
+ (description "This project allows Python code to extend built-in types.")
+ (license (list license:gpl3+ license:expat))))
+
+(define-public python-shouldbe
+ (package
+ (name "python-shouldbe")
+ (version "0.1.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "shouldbe" version))
+ (sha256
+ (base32
+ "16zbvjxf71dl4yfbgcr6idyim3mdrfvix1dv8b95p0s9z07372pj"))))
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-forbiddenfruit" ,python-forbiddenfruit)))
+ (native-inputs
+ `(("python-nose" ,python-nose)))
+ (home-page "https://github.com/directxman12/should_be")
+ (synopsis "Python Assertion Helpers inspired by Shouldly")
+ (description
+ "Python Assertion Helpers inspired by Shouldly.")
+ (license license:isc)))
+
+(define-public python-k5test
+ (package
+ (name "python-k5test")
+ (version "0.9.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "k5test" version))
+ (sha256
+ (base32
+ "1lqp3jgfngyhaxjgj3n230hn90wsylwilh120yjf62h7b1s02mh8"))))
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-six" ,python-six)
+ ;; `which`, `kadmin.local` binaries called inside library
+ ("which" ,which)
+ ("mit-krb5" ,mit-krb5)))
+ (native-inputs `(("mit-krb5" ,mit-krb5)))
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'patch-paths
+ (lambda* _
+ (substitute* "k5test/realm.py"
+ (("'kadmin_local'") "'kadmin.local'")))))))
+ (home-page "https://github.com/pythongssapi/k5test")
+ (synopsis "Library for setting up self-contained Kerberos 5 environments")
+ (description
+ "@code{k5test} is a library for setting up self-contained Kerberos 5
+environments, and running Python unit tests inside those environments. It is
+based on the file of the same name found alongside the MIT Kerberos 5 unit
+tests.")
+ (license license:isc)))
+
+(define-public python-gssapi
+ (package
+ (name "python-gssapi")
+ (version "1.6.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "gssapi" version))
+ (sha256
+ (base32
+ "1gymg4asvwrz7y13qpwp2s5g8qwq179d72gkj09q6bfcgs82l5wr"))))
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-decorator" ,python-decorator)
+ ("python-six" ,python-six)))
+ (inputs
+ `(("mit-krb5" ,mit-krb5)))
+ ;; for tests
+ (native-inputs
+ `(("python-shouldbe" ,python-shouldbe)
+ ("python-parameterized" ,python-parameterized)
+ ("python-k5test" ,python-k5test)
+ ("python-nose" ,python-nose)))
+ (home-page "https://github.com/pythongssapi/python-gssapi")
+ (synopsis "Python GSSAPI Wrapper")
+ (description
+ "Python-GSSAPI provides both low-level and high level wrappers around the
+GSSAPI C libraries. While it focuses on the Kerberos mechanism, it should
+also be useable with other GSSAPI mechanisms.")
+ (license license:isc)))
HCoop / jackhill / guix / guix.git / blobdiff