;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us>
;;; Copyright © 2019 Alex Griffin <a@ajgrf.com>
;;; Copyright © 2019 Gábor Boskovits <boskovits@gmail.com>
+;;; Copyright © 2019 Pierre Langlois <pierre.langlois@gmx.com>
;;;
;;; This file is part of GNU Guix.
;;;
#:use-module (gnu packages dbm)
#:use-module (gnu packages emacs)
#:use-module (gnu packages flex)
+ #:use-module (gnu packages gcc)
#:use-module (gnu packages gettext)
#:use-module (gnu packages glib)
#:use-module (gnu packages gnupg)
#:use-module (gnu packages linux)
#:use-module (gnu packages man)
#:use-module (gnu packages ncurses)
+ #:use-module (gnu packages onc-rpc)
#:use-module (gnu packages parallel)
#:use-module (gnu packages pcre)
#:use-module (gnu packages perl)
#:use-module (gnu packages popt)
#:use-module (gnu packages python)
#:use-module (gnu packages python-crypto)
+ #:use-module (gnu packages python-web)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages rdf)
#:use-module (gnu packages readline)
(name "4store")
(version "1.1.6")
(source (origin
- (method url-fetch)
- (uri (string-append "https://github.com/4store/4store/archive/v"
- version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/4store/4store.git")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
- (base32 "004fmcf1w75zhc1x3zc6kc97j4jqn2v5nhk6yb3z3cpfrhzi9j50"))
+ (base32 "1kzdfmwpzy64cgqlkcz5v4klwx99w0jk7afckyf7yqbqb4rydmpk"))
(patches (search-patches "4store-unset-preprocessor-directive.patch"
"4store-fix-buildsystem.patch"))))
(build-system gnu-build-system)
("cyrus-sasl" ,cyrus-sasl)
("openssl" ,openssl)
("util-linux" ,util-linux)))
- (arguments
- `(#:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'generate-configure
- (lambda _
- (invoke "sh" "autogen.sh"))))))
;; http://www.4store.org has been down for a while now.
(home-page "https://github.com/4store/4store")
(synopsis "Clustered RDF storage and query engine")
(home-page "http://labix.org/mgo")
(license license:bsd-2)))
+(define-public ephemeralpg
+ (package
+ (name "ephemeralpg")
+ (version "2.8")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append
+ "http://eradman.com/ephemeralpg/code/ephemeralpg-"
+ version ".tar.gz"))
+ (sha256
+ (base32 "1dpfxsd8a52psx3zlfbqkw53m35w28qwyb87a8anz143x6gnkkr4"))))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:make-flags (list "CC=gcc"
+ (string-append "PREFIX=" %output))
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (replace 'check
+ (lambda* (#:key inputs #:allow-other-keys)
+ ;; The intention for one test is to test without PostgreSQL on
+ ;; the $PATH, so replace the test $PATH with just the util-linux
+ ;; bin, which contains getopt. It will hopefully be possible to
+ ;; remove this for releases after 2.8.
+ (substitute* "test.rb"
+ (("/bin:/usr/bin")
+ (string-append (assoc-ref inputs "util-linux")
+ "/bin")))
+ ;; Set the LC_ALL=C as some tests use sort, and the locale
+ ;; affects the order. It will hopefully be possible to remove
+ ;; this for releases after 2.8.
+ (setenv "LC_ALL" "C")
+ (invoke "ruby" "test.rb")
+ #t))
+ (add-after 'install 'wrap
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (let ((out (assoc-ref outputs "out")))
+ (wrap-program (string-append out "/bin/pg_tmp")
+ `("PATH" ":" prefix
+ (,(string-append (assoc-ref inputs "util-linux")
+ "/bin")
+ ,(string-append (assoc-ref inputs "postgresql")
+ "/bin")
+ ;; For getsocket
+ ,(string-append out "/bin")))))
+ #t)))))
+ (inputs
+ `(("postgresql" ,postgresql)
+ ("util-linux" ,util-linux)))
+ (native-inputs
+ `(("ruby" ,ruby)))
+ (home-page "http://eradman.com/ephemeralpg/")
+ (synopsis "Run temporary PostgreSQL databases")
+ (description
+ "@code{pg_tmp} creates temporary PostgreSQL databases, suitable for tasks
+like running software test suites. Temporary databases created with
+@code{pg_tmp} have a limited shared memory footprint and are automatically
+garbage-collected after a configurable number of seconds (the default is
+60).")
+ (license license:isc)))
+
(define-public es-dump-restore
(package
(name "es-dump-restore")
`(#:configure-flags '("-DBUILD_SHARED_LIBS=ON" "-DLEVELDB_BUILD_TESTS=ON")))
(inputs
`(("snappy" ,snappy)))
- (home-page "http://leveldb.org/")
+ (home-page "https://github.com/google/leveldb")
(synopsis "Fast key-value storage library")
(description
"LevelDB is a fast key-value storage library that provides an ordered
(define-public python-pylibmc
(package
(name "python-pylibmc")
- (version "1.6.0")
+ (version "1.6.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pylibmc" version))
(sha256
- (base32
- "1n6nvvhl0g52gpzzwdj1my6049xljkfwyxxygnwda9smrbj7pyay"))))
+ (base32 "1sg7d9j0v6g3xg3finf4l1hb72c13vcyyi6rqrc9shbx903d93ca"))))
(build-system python-build-system)
(arguments
'(#:phases
`(("libmemcached" ,libmemcached)
("zlib" ,zlib)
("cyrus-sasl" ,cyrus-sasl)))
- (home-page
- "http://sendapatch.se/projects/pylibmc/")
- (synopsis
- "Python client for memcached")
+ (home-page "http://sendapatch.se/projects/pylibmc/")
+ (synopsis "Python client for memcached")
(description
"@code{pylibmc} is a client in Python for memcached. It is a wrapper
around TangentOrg’s libmemcached library, and can be used as a drop-in
(search-patch "mongodb-support-unknown-linux-distributions.patch")))))
(build-system scons-build-system)
(inputs
- `(("openssl" ,openssl)
+ `(("openssl" ,openssl-1.0)
("pcre" ,pcre)
,@(match (%current-system)
((or "x86_64-linux" "aarch64-linux" "mips64el-linux")
,(format #f "--jobs=~a" (parallel-job-count))
"--ssl")))
(modify-phases %standard-phases
+ (add-after 'unpack 'patch
+ (lambda _
+ ;; Remove use of GNU extensions in parse_number_test.cpp, to
+ ;; allow compiling with GCC 7 or later
+ ;; https://jira.mongodb.org/browse/SERVER-28063
+ (substitute* "src/mongo/base/parse_number_test.cpp"
+ (("0xabcab\\.defdefP-10")
+ "687.16784283419838"))
+ #t))
(add-after 'unpack 'scons-propagate-environment
(lambda _
;; Modify the SConstruct file to arrange for
(define-public mysql
(package
(name "mysql")
- (version "5.7.23")
+ (version "5.7.27")
(source (origin
(method url-fetch)
(uri (list (string-append
name "-" version ".tar.gz")))
(sha256
(base32
- "0rbc3xsc11lq2dm0ip6gxa16c06hi74scb97x5cw7yhbabaz4c07"))))
+ "1fhv16zr46pxm1j8vb8x8mh3nwzglg01arz8gnazbmjqldr5idpq"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags
#t))))))
(native-inputs
`(("bison" ,bison)
- ("perl" ,perl)))
+ ("perl" ,perl)
+ ("pkg-config" ,pkg-config)))
(inputs
`(("boost" ,boost-for-mysql)
("libaio" ,libaio)
+ ("libtirpc" ,libtirpc)
("ncurses" ,ncurses)
("openssl" ,openssl)
+ ("rpcsvc-proto" ,rpcsvc-proto) ; rpcgen
("zlib" ,zlib)))
(home-page "https://www.mysql.com/")
(synopsis "Fast, easy to use, and popular database")
(define-public mariadb
(package
(name "mariadb")
- (version "10.1.40")
+ (version "10.1.41")
(source (origin
(method url-fetch)
- (uri (string-append "https://downloads.mariadb.org/f/"
- name "-" version "/source/"
- name "-" version ".tar.gz"))
+ (uri (string-append "https://downloads.mariadb.com/MariaDB"
+ "/mariadb-" version "/source/mariadb-"
+ version ".tar.gz"))
(sha256
(base32
- "19375bnq0yg52kqh6cy00s5rglcxdrs5bb2hy7dqv2xqa9z7lxci"))
+ "1wh0073lqw3d9xs150bf2q3qvjwa6886mfi9khmsn7p8vapw6irb"))
(patches (search-patches "mariadb-client-test-32bit.patch"))
(modules '((guix build utils)))
(snippet
;; For now, disable the features that that use libarchive (xtrabackup).
"-DWITH_LIBARCHIVE=OFF"
+ ;; Disable the TokuDB engine, because its test suite frequently fails,
+ ;; and loading it crashes the server: <https://bugs.gnu.org/35521>.
+ "-DTOKUDB_OK=OFF"
+
;; Ensure the system libraries are used.
"-DWITH_JEMALLOC=yes"
"-DWITH_PCRE=system"
;; 2030-12-31. See <https://bugs.gnu.org/34351> for details.
"main.mysqldump"
- ;; XXX: Fails sporadically.
- "innodb_fts.crash_recovery"
-
;; FIXME: This test fails on i686:
;; -myisampack: Can't create/write to file (Errcode: 17 "File exists")
;; +myisampack: Can't create/write to file (Errcode: 17 "File exists)
#t))))))
(native-inputs
`(("bison" ,bison)
+ ;; XXX: On armhf, use GCC 5 to work around <https://bugs.gnu.org/37605>.
+ ,@(if (string-prefix? "armhf" (%current-system))
+ `(("gcc", gcc-5))
+ '())
("perl" ,perl)))
(inputs
`(("jemalloc" ,jemalloc)
("libxml2" ,libxml2)
("ncurses" ,ncurses)
("pcre" ,pcre)
- ("snappy" ,snappy)
("xz" ,xz)
("zlib" ,zlib)))
(propagated-inputs
;; mariadb.pc says -lssl -lcrypto, so propagate it.
- `(("openssl" ,openssl)))
+ `(("openssl" ,openssl-1.0)))
;; The test suite is very resource intensive and can take more than three
;; hours on a x86_64 system. Give slow and busy machines some leeway.
(properties '((timeout . 64800))) ;18 hours
(define-public postgresql
(package
(name "postgresql")
- (version "10.8")
+ (version "10.10")
(source (origin
(method url-fetch)
(uri (string-append "https://ftp.postgresql.org/pub/source/v"
version "/postgresql-" version ".tar.bz2"))
(sha256
(base32
- "0pfdmy4w95b49w9rkn8dwvzmi2brpqfvbxd04y0k0s0xvymc565i"))
+ "0lzj46dwd9cw94gnqm36bxd7jlhfdyqjrfzr3c4xd3prfn2rnkxd"))
(patches (search-patches "postgresql-disable-resolve_symlinks.patch"))))
(build-system gnu-build-system)
(arguments
(package
(inherit postgresql)
(name "postgresql")
- (version "11.4")
+ (version "11.5")
(source (origin
(method url-fetch)
(uri (string-append "https://ftp.postgresql.org/pub/source/v"
version "/postgresql-" version ".tar.bz2"))
(sha256
(base32
- "12ycjlqncijgmd5z078ybwda8ilas96lc7nxxmdq140mzpgjv002"))))))
+ "106ikalvrilihlvhq7xj7snq98hgbgq6qsgjrd252wgw1c327pvz"))))))
(define-public postgresql-9.6
(package
(inherit postgresql)
(name "postgresql")
- (version "9.6.13")
+ (version "9.6.15")
(source (origin
(method url-fetch)
(uri (string-append "https://ftp.postgresql.org/pub/source/v"
version "/postgresql-" version ".tar.bz2"))
(sha256
(base32
- "197964wb5pc5fx81a6mh9hlcrr9sgr3nqlpmljv6asi9aq0d5gpc"))))))
+ "02hp69h2p02asfblkaahblzdz2zmawd2r11h6237y5j7yadgxn9w"))))))
(define-public python-pymysql
(package
(define-public sqitch
(package
(name "sqitch")
- (version "0.9999")
+ (version "1.0.0")
(source
(origin
(method url-fetch)
(uri (string-append
- "mirror://cpan/authors/id/D/DW/DWHEELER/App-Sqitch-"
- version
- ".tar.gz"))
+ "mirror://cpan/authors/id/D/DW/DWHEELER/App-Sqitch-v"
+ version ".tar.gz"))
(sha256
- (base32
- "1cvj8grs3bzc4g7dw1zc26g4biv1frav18sq0fkvi2kk0q1aigzm"))))
+ (base32 "0p4wraqiscvwmmsvfqfy65blgsilwpvd9zj4d2zvm2xdx70ncr7l"))))
(build-system perl-build-system)
(arguments
'(#:phases
("perl-dbi" ,perl-dbi)
("perl-devel-stacktrace" ,perl-devel-stacktrace)
("perl-encode-locale" ,perl-encode-locale)
- ("perl-file-homedir" ,perl-file-homedir)
("perl-hash-merge" ,perl-hash-merge)
("perl-ipc-run3" ,perl-ipc-run3)
("perl-ipc-system-simple" ,perl-ipc-system-simple)
(define-public tdb
(package
(name "tdb")
- (version "1.4.0")
+ (version "1.4.2")
(source (origin
(method url-fetch)
(uri (string-append "https://www.samba.org/ftp/tdb/tdb-"
version ".tar.gz"))
(sha256
(base32
- "0d9d2f1c83gmmq30bkfs50yb8399mr9xjjzscma4kyq0ajf75861"))))
+ "0jh0iqbb6pkvqrqn033w5g6gwa4bdgkvp49z0qpkk3h2wk6b4h4h"))))
(build-system gnu-build-system)
(arguments
'(#:phases
(define-public python-pyodbc
(package
(name "python-pyodbc")
- (version "4.0.26")
+ (version "4.0.27")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyodbc" version))
(sha256
- (base32 "1qrxnf7ji5hml7z4y669k4wmk3iz2pcsr05bnn1n912asash09z5"))
+ (base32 "1kd2i7hc1330cli72vawzby17c3039cqn1aba4i0zrjnpghjhmib"))
(file-name (string-append name "-" version ".tar.gz"))))
(build-system python-build-system)
(inputs
`(("unixodbc" ,unixodbc)))
(arguments
- `(;; No unit tests exist.
- #:tests? #f))
+ `(#:tests? #f)) ; no unit tests exist
(home-page "https://github.com/mkleehammer/pyodbc")
(synopsis "Python ODBC Library")
(description "@code{python-pyodbc} provides a Python DB-API driver
(define-public python-alembic
(package
(name "python-alembic")
- (version "1.0.10")
+ (version "1.0.11")
(source
(origin
(method url-fetch)
(uri (pypi-uri "alembic" version))
(sha256
(base32
- "1dwl0264r6ri2jyrjr68am04x538ab26xwy4crqjnnhm4alwm3c2"))))
+ "1k5hag0vahd5vrf9abx8fdj2whrwaw2iq2yp736mmxnbsn5xkdyd"))))
(build-system python-build-system)
(native-inputs
`(("python-mock" ,python-mock)
("python-mako" ,python-mako)
("python-editor" ,python-editor)))
(home-page "https://bitbucket.org/zzzeek/alembic")
- (synopsis
- "Database migration tool for SQLAlchemy")
+ (synopsis "Database migration tool for SQLAlchemy")
(description
"Alembic is a lightweight database migration tool for usage with the
SQLAlchemy Database Toolkit for Python.")
(define-public python-redis
(package
(name "python-redis")
- (version "3.2.1")
+ (version "3.3.8")
(source
(origin
(method url-fetch)
(uri (pypi-uri "redis" version))
(sha256
- (base32 "0wwj8il4c3aff15xwwcjfci367zxsakq05ps1a2il6yavp91i94c"))))
+ (base32 "0fyxzqax7lcwzwhvnz0i0q6v62hxyv1mv52ywx3bpff9a2vjz8lq"))))
(build-system python-build-system)
;; Tests require a running Redis server.
(arguments '(#:tests? #f))
(native-inputs
`(("go-github.com-howeyc-gopass" ,go-github.com-howeyc-gopass)
("go-github.com-jessevdk-go-flags" ,go-github.com-jessevdk-go-flags)
- ("go-golang.org-x-crypto-ssh-terminal" ,go-golang.org-x-crypto-ssh-terminal)
+ ("go-golang-org-x-crypto" ,go-golang-org-x-crypto)
("go-gopkg.in-mgo.v2" ,go-gopkg.in-mgo.v2)
("go-gopkg.in-tomb.v2" ,go-gopkg.in-tomb.v2)
("go-github.com-nsf-termbox-go" ,go-github.com-nsf-termbox-go)
("python-pandas" ,python-pandas)
("python-six" ,python-six)))
(native-inputs
- `(("cmake" ,cmake)
+ `(("cmake" ,cmake-minimal)
("python-cython" ,python-cython)
("python-pytest" ,python-pytest)
("python-pytest-runner" ,python-pytest-runner)
(define-public python2-pyarrow
(package-with-python2 python-pyarrow))
+
+(define-public python-crate
+ (package
+ (name "python-crate")
+ (version "0.23.2")
+ (source (origin
+ (method url-fetch)
+ (uri (pypi-uri "crate" version))
+ (sha256
+ (base32
+ "0ngmlvi320c5gsxab0s7qgq0ck4jdlcwvb6lbjhnfprafdp56vvx"))))
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-urllib3" ,python-urllib3)))
+ (home-page "https://github.com/crate/crate-python")
+ (synopsis "CrateDB Python client")
+ (description
+ "This package provides a Python client library for CrateDB.
+It implements the Python DB API 2.0 specification and includes support for
+SQLAlchemy.")
+ (license license:asl2.0)))
HCoop / jackhill / guix / guix.git / blobdiff