Merge branch 'core-updates'

[jackhill/guix/guix.git] / gnu / packages / python.scm

diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index 102b69c..6fe83b2 100644 (file)
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -806,14 +806,14 @@ NetCDF files can also be read and modified.  Python-HDF4 is a fork of
 (define-public python-h5py
   (package
     (name "python-h5py")
-    (version "2.6.0")
+    (version "2.7.0")
     (source
      (origin
       (method url-fetch)
       (uri (pypi-uri "h5py" version))
       (sha256
        (base32
-        "0df46dg7i7xfking9lp221bfm8dbl974yvlrbi1w7r6m61ac7bxj"))))
+        "0433sdv6xc9p7v1xs1gvbxp7p152ywi3nplgjb258q9fvw9469br"))))
     (build-system python-build-system)
     (arguments
      `(#:tests? #f ; no test target
@@ -855,14 +855,14 @@ concepts.")
 (define-public python-netcdf4
   (package
     (name "python-netcdf4")
-    (version "1.2.7")
+    (version "1.2.9")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "netCDF4" version))
        (sha256
         (base32
-         "1fllizmnpw0zkzzm4j9pgamarlzfn3kmv9zrm0w65q1y31h9ni0c"))))
+         "1h6jq338amlbk0ilzvjyl7cck80i0bah9a5spn9in71vy2qxm7i5"))))
     (build-system python-build-system)
     (native-inputs
      `(("python-cython" ,python-cython)))
@@ -3477,7 +3477,7 @@ and is very extensible.")
 (define-public python-scikit-learn
   (package
     (name "python-scikit-learn")
-    (version "0.18.1")
+    (version "0.19.0")
     (source
      (origin
        (method url-fetch)
@@ -3487,7 +3487,7 @@ and is very extensible.")
        (file-name (string-append name "-" version ".tar.gz"))
        (sha256
         (base32
-         "1hwswckdmd27f7k1jvwdc0m4mqrgxl2s245yq1scq34v124bjqgq"))))
+         "0g7q4ri75mj93wpa9bp83a3jmrf3dm5va9h7k4zkbcxr6bgqka15"))))
     (build-system python-build-system)
     (arguments
      `(#:phases
@@ -5230,6 +5230,53 @@ cluster without needing to write any wrapper code yourself.")
 (define-public python2-gridmap
   (package-with-python2 python-gridmap))
 
+(define-public python-honcho
+  (package
+    (name "python-honcho")
+    (version "1.0.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append
+             "https://github.com/nickstenning/honcho/archive/v"
+             version ".tar.gz"))
+       (file-name (string-append name "-" version ".tar.gz"))
+       (sha256
+        (base32 "0zizn61n5z5hq421hkypk9pw8s6fpxw30f4hsg7k4ivwzy3gjw9j"))))
+    (build-system python-build-system)
+    (native-inputs
+     `(("python-pytest" ,python-pytest-3.0)
+       ("python-mock" ,python-mock)
+       ("python-tox" ,python-tox)
+       ("which" ,which))) ;for tests
+    (propagated-inputs
+     `(("python-jinja2" ,python-jinja2)))
+    (arguments
+     `(#:phases
+       (modify-phases %standard-phases
+         (delete 'check)
+         (add-after 'install 'check
+           (lambda* (#:key outputs inputs #:allow-other-keys)
+             ;; fix honcho path in testsuite
+             (substitute* "tests/conftest.py"
+               (("'honcho'") (string-append "'" (assoc-ref outputs "out")
+                                            "/bin/honcho" "'")))
+             ;; It's easier to run tests after install.
+             ;; Make installed package available for running the tests
+             (add-installed-pythonpath inputs outputs)
+             (zero? (system* "py.test" "-v")))))))
+    (home-page "https://github.com/nickstenning/honcho")
+    (synopsis "Manage Procfile-based applications")
+    (description
+      "A Procfile is a file which describes how to run an application
+consisting of serveral processes. honcho starts all listed processes.
+The output of all running processes is collected by honcho and
+displayed.")
+    (license license:expat)))
+
+(define-public python2-honcho
+  (package-with-python2 python-honcho))
+
 (define-public python-pexpect
   (package
     (name "python-pexpect")
@@ -13932,7 +13979,7 @@ parse many formal languages.")
 (define-public python2-cliapp
   (package
     (name "python2-cliapp")
-    (version "1.20160724")
+    (version "1.20170823")
     (source
      (origin
        (method url-fetch)
@@ -13941,7 +13988,7 @@ parse many formal languages.")
              version ".tar.gz"))
        (sha256
         (base32
-         "025cyi75vxyghbm4hav8dz4fzwksshddavy9g9fwr440awcvw74f"))))
+         "1i9gik0xrj6jmi95s5w988jl1y265baz5xm5pbqdyvsh8h9ln6yq"))))
     (build-system python-build-system)
     (arguments
      `(#:python ,python-2))
@@ -13958,7 +14005,7 @@ iterating over input files.")
 (define-public python2-ttystatus
   (package
     (name "python2-ttystatus")
-    (version "0.32")
+    (version "0.35")
     (source
      (origin
        (method url-fetch)
@@ -13967,7 +14014,7 @@ iterating over input files.")
              version ".tar.gz"))
        (sha256
         (base32
-         "0b5g889jj23r2w1hi300cdldx6jvspanp0ybf5n1qvdvl150aamf"))))
+         "0vivqbw7ddhsq1zj3g9cvvv4f0phl0pis2smsnwcr2szz2fk3hl6"))))
     (build-system python-build-system)
     (arguments
      `(#:python ,python-2))
@@ -15566,14 +15613,14 @@ address is valid and really exists.")
 (define-public python-marshmallow
   (package
     (name "python-marshmallow")
-    (version "3.0.0b2")
+    (version "3.0.0b3")
     (source
      (origin
       (method url-fetch)
       (uri (pypi-uri "marshmallow" version))
       (sha256
        (base32
-        "11bnpvfdbczr74177p295zbkdrax2cahvbj5bqhhlprgz2xxi5d9"))))
+        "07mcrij1yvk85lvgx44wwr9pc80xryghvlgayb057g1cazcypysd"))))
     (build-system python-build-system)
     (propagated-inputs
      `(("python-dateutil" ,python-dateutil)