;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org>
;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2015 Eric Bavier <bavier@member.fsf.org>
-;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com>
+;;; Copyright © 2015, 2016 Sou Bunnbu <iyzsong@gmail.com>
;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016, 2017 ng0 <contact.ng0@cryptolab.net>
-;;; Copyright © 2016 Roel Janssen <roel@gnu.org>
+;;; Copyright © 2016, 2017 Roel Janssen <roel@gnu.org>
;;; Copyright © 2016 David Craven <david@craven.ch>
;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca>
;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Alex Vong <alexvong1995@gmail.com>
+;;; Copyright © 2017 Ben Woodcroft <donttrustben@gmail.com>
+;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
;;;
;;; This file is part of GNU Guix.
;;;
#:use-module (gnu packages gettext)
#:use-module (gnu packages glib)
#:use-module (gnu packages gnupg)
+ #:use-module (gnu packages time)
#:use-module (gnu packages jemalloc)
#:use-module (gnu packages language)
#:use-module (gnu packages libevent)
#:use-module (gnu packages python)
#:use-module (gnu packages rdf)
#:use-module (gnu packages readline)
+ #:use-module (gnu packages ruby)
+ #:use-module (gnu packages serialization)
#:use-module (gnu packages tcl)
#:use-module (gnu packages tls)
+ #:use-module (gnu packages valgrind)
#:use-module (gnu packages xml)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix build-system gnu)
#:use-module (guix build-system perl)
#:use-module (guix build-system python)
+ #:use-module (guix build-system ruby)
#:use-module (guix build-system cmake)
#:use-module (guix utils)
#:use-module (srfi srfi-26)
(arguments
`(#:phases
(modify-phases %standard-phases
- (add-before 'configure 'generate-configure
+ (add-after 'unpack 'generate-configure
(lambda _
- (zero? (system* "./autogen.sh")))))))
+ (zero? (system* "sh" "autogen.sh")))))))
;; http://www.4store.org has been down for a while now.
(home-page "https://github.com/garlik/4store")
(synopsis "Clustered RDF storage and query engine")
(define-public bdb
(package
(name "bdb")
- (version "6.2.23")
+ (version "6.2.32")
(source (origin
(method url-fetch)
(uri (string-append "http://download.oracle.com/berkeley-db/db-"
version ".tar.gz"))
(sha256
(base32
- "1isxx4jfmnh913jzhp8hhfngbk6dsg46f4kjpvvc56maj64jqqa7"))))
+ "1yx8wzhch5wwh016nh0kfxvknjkafv6ybkqh6nh7lxx50jqf5id9"))))
(build-system gnu-build-system)
(outputs '("out" ; programs, libraries, headers
"doc")) ; 94 MiB of HTML docs
'(#:tests? #f ; no check target available
#:disallowed-references ("doc")
#:phases
- (alist-replace
- 'configure
- (lambda* (#:key outputs #:allow-other-keys)
- (let ((out (assoc-ref outputs "out"))
- (doc (assoc-ref outputs "doc")))
- ;; '--docdir' is not honored, so we need to patch.
- (substitute* "dist/Makefile.in"
- (("docdir[[:blank:]]*=.*")
- (string-append "docdir = " doc "/share/doc/bdb")))
-
- (zero?
- (system* "./dist/configure"
- (string-append "--prefix=" out)
- (string-append "CONFIG_SHELL=" (which "bash"))
- (string-append "SHELL=" (which "bash"))
-
- ;; Remove 7 MiB of .a files.
- "--disable-static"
-
- ;; The compatibility mode is needed by some packages,
- ;; notably iproute2.
- "--enable-compat185"
-
- ;; The following flag is needed so that the inclusion
- ;; of db_cxx.h into C++ files works; it leads to
- ;; HAVE_CXX_STDHEADERS being defined in db_cxx.h.
- "--enable-cxx"))))
- %standard-phases)))
+ (modify-phases %standard-phases
+ (replace 'configure
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let ((out (assoc-ref outputs "out"))
+ (doc (assoc-ref outputs "doc")))
+ ;; '--docdir' is not honored, so we need to patch.
+ (substitute* "dist/Makefile.in"
+ (("docdir[[:blank:]]*=.*")
+ (string-append "docdir = " doc "/share/doc/bdb")))
+
+ (zero?
+ (system* "./dist/configure"
+ (string-append "--prefix=" out)
+ (string-append "CONFIG_SHELL=" (which "bash"))
+ (string-append "SHELL=" (which "bash"))
+
+ ;; Remove 7 MiB of .a files.
+ "--disable-static"
+
+ ;; The compatibility mode is needed by some packages,
+ ;; notably iproute2.
+ "--enable-compat185"
+
+ ;; The following flag is needed so that the inclusion
+ ;; of db_cxx.h into C++ files works; it leads to
+ ;; HAVE_CXX_STDHEADERS being defined in db_cxx.h.
+ "--enable-cxx"))))))))
(synopsis "Berkeley database")
(description
"Berkeley DB is an embeddable database allowing developers the choice of
`(#:tests? #f ; no check target available
#:disallowed-references ("doc")
#:phases
- (alist-replace
- 'configure
- (lambda* (#:key outputs #:allow-other-keys)
- (let ((out (assoc-ref outputs "out"))
- (doc (assoc-ref outputs "doc")))
- ;; '--docdir' is not honored, so we need to patch.
- (substitute* "dist/Makefile.in"
- (("docdir[[:blank:]]*=.*")
- (string-append "docdir = " doc "/share/doc/bdb")))
-
- (zero?
- (system* "./dist/configure"
- (string-append "--prefix=" out)
- (string-append "CONFIG_SHELL=" (which "bash"))
- (string-append "SHELL=" (which "bash"))
-
- ;; Bdb doesn't recognize aarch64 as an architecture.
- ,@(if (string=? "aarch64-linux" (%current-system))
- '("--build=aarch64-unknown-linux-gnu")
- '())
-
- ;; Remove 7 MiB of .a files.
- "--disable-static"
-
- ;; The compatibility mode is needed by some packages,
- ;; notably iproute2.
- "--enable-compat185"
-
- ;; The following flag is needed so that the inclusion
- ;; of db_cxx.h into C++ files works; it leads to
- ;; HAVE_CXX_STDHEADERS being defined in db_cxx.h.
- "--enable-cxx"))))
- %standard-phases)))))
+ (modify-phases %standard-phases
+ (replace 'configure
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let ((out (assoc-ref outputs "out"))
+ (doc (assoc-ref outputs "doc")))
+ ;; '--docdir' is not honored, so we need to patch.
+ (substitute* "dist/Makefile.in"
+ (("docdir[[:blank:]]*=.*")
+ (string-append "docdir = " doc "/share/doc/bdb")))
+
+ (zero?
+ (system* "./dist/configure"
+ (string-append "--prefix=" out)
+ (string-append "CONFIG_SHELL=" (which "bash"))
+ (string-append "SHELL=" (which "bash"))
+
+ ;; Bdb doesn't recognize aarch64 as an architecture.
+ ,@(if (string=? "aarch64-linux" (%current-system))
+ '("--build=aarch64-unknown-linux-gnu")
+ '())
+
+ ;; Remove 7 MiB of .a files.
+ "--disable-static"
+
+ ;; The compatibility mode is needed by some packages,
+ ;; notably iproute2.
+ "--enable-compat185"
+
+ ;; The following flag is needed so that the inclusion
+ ;; of db_cxx.h into C++ files works; it leads to
+ ;; HAVE_CXX_STDHEADERS being defined in db_cxx.h.
+ "--enable-cxx"))))))))))
+
+(define-public es-dump-restore
+ (package
+ (name "es-dump-restore")
+ (version "2.1.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (rubygems-uri "es_dump_restore" version))
+ (sha256
+ (base32
+ "020yk7f1hw48clmf5501z3xv9shsdchyymcv0y2cci2c1xvr1mim"))))
+ (build-system ruby-build-system)
+ (arguments
+ '(#:tests? #f ;; No testsuite.
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'install 'wrap-bin-es_dump_restore
+ (lambda* (#:key outputs #:allow-other-keys)
+ (wrap-program (string-append (assoc-ref outputs "out")
+ "/bin/es_dump_restore")
+ `("GEM_PATH" ":" prefix (,(string-append
+ (getenv "GEM_PATH")
+ ":"
+ (getenv "GEM_HOME")))))
+ #t)))))
+ (propagated-inputs
+ `(("ruby-httpclient" ,ruby-httpclient)
+ ("ruby-multi-json" ,ruby-multi-json)
+ ("ruby-progress_bar" ,ruby-progress_bar)
+ ("ruby-rubyzip" ,ruby-rubyzip)
+ ("ruby-thor" ,ruby-thor)))
+ (synopsis "Utility for dumping and restoring ElasticSearch indexes")
+ (description
+ "This package provides a utility for dumping the contents of an
+ElasticSearch index to a compressed file and restoring the dumpfile back to an
+ElasticSearch server")
+ (home-page "https://github.com/patientslikeme/es_dump_restore")
+ (license license:expat)))
(define-public leveldb
(package
applications.")
(license license:bsd-3)))
+(define-public mongodb
+ (package
+ (name "mongodb")
+ (version "3.4.9")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/mongodb/mongo/archive/r"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "0gidwyvh3bdwmk2pccgkqkaln4ysgn8iwa7ihjzllsq0rdg95045"))
+ (patches
+ (list
+ (search-patch "mongodb-support-unknown-linux-distributions.patch")))))
+ (build-system gnu-build-system)
+ (inputs
+ `(("openssl" ,openssl)
+ ("pcre" ,pcre)
+ ("yaml-cpp" ,yaml-cpp)
+ ("zlib" ,zlib)
+ ("snappy" ,snappy)
+ ("boost" ,boost)))
+ (native-inputs
+ `(("scons" ,scons)
+ ("python" ,python-2)
+ ("valgrind" ,valgrind)
+ ("perl" ,perl)))
+ (arguments
+ `(#:phases
+ (let ((common-options
+ `(;; "--use-system-tcmalloc" TODO: Missing gperftools
+ "--use-system-pcre"
+ ;; TODO
+ ;; build/opt/mongo/db/fts/unicode/string.o failed: Error 1
+ ;; --use-system-boost
+ "--use-system-snappy"
+ "--use-system-zlib"
+ "--use-system-valgrind"
+ ;; "--use-system-stemmer" TODO: Missing relevant package
+ "--use-system-yaml"
+ "--disable-warnings-as-errors"
+ ,(format #f "--jobs=~a" (parallel-job-count))
+ "--ssl")))
+ (modify-phases %standard-phases
+ (delete 'configure) ; There is no configure phase
+ (add-after 'unpack 'scons-propagate-environment
+ (lambda _
+ ;; Modify the SConstruct file to arrange for
+ ;; environment variables to be propagated.
+ (substitute* "SConstruct"
+ (("^env = Environment\\(")
+ "env = Environment(ENV=os.environ, "))
+ #t))
+ (add-after 'unpack 'create-version-file
+ (lambda _
+ (call-with-output-file "version.json"
+ (lambda (port)
+ (display ,(simple-format #f "{
+ \"version\": \"~A\"
+}" version) port)))
+ #t))
+ (replace 'build
+ (lambda _
+ (zero? (apply system*
+ `("scons"
+ ,@common-options
+ "mongod" "mongo" "mongos")))))
+ (replace 'check
+ (lambda* (#:key tests? #:allow-other-keys)
+ (or (not tests?)
+ (zero? (apply system*
+ `("scons"
+ ,@common-options
+ "dbtest" "unittests"))))))
+ (replace 'install
+ (lambda _
+ (let ((bin (string-append (assoc-ref %outputs "out") "/bin")))
+ (install-file "mongod" bin)
+ (install-file "mongos" bin)
+ (install-file "mongo" bin))
+ #t))))))
+ (home-page "https://www.mongodb.org/")
+ (synopsis "High performance and high availability document database")
+ (description
+ "Mongo is a high-performance, high availability, schema-free
+document-oriented database. A key goal of MongoDB is to bridge the gap
+between key/value stores (which are fast and highly scalable) and traditional
+RDBMS systems (which are deep in functionality).")
+ (license (list license:agpl3
+ ;; Some parts are licensed under the Apache License
+ license:asl2.0))))
+
(define-public mysql
(package
(name "mysql")
- (version "5.7.19")
+ (version "5.7.20")
(source (origin
(method url-fetch)
(uri (list (string-append
name "-" version ".tar.gz")))
(sha256
(base32
- "1c8y54yk756179nx4dgg79dijmjdq5n8l057cnqsg70pjdpyfl9y"))))
+ "11v4g3igigv3zvknv67qml8in6fjrbs2vnr3q6bg6f62nydm95sk"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags
(for-each delete-file
(find-files (string-append out "/bin")
"_embedded$"))
- #t))))
- ;; On aarch64 the test suite runs out of memory and fails.
- ,@(if (string-prefix? "aarch64-linux"
- (or (%current-target-system) (%current-system)))
- '(#:tests? #f)
- '())))
+ #t))))))
(native-inputs
`(("bison" ,bison)
("perl" ,perl)))
(define-public postgresql
(package
(name "postgresql")
- (version "9.6.4")
+ (version "10.0")
(source (origin
(method url-fetch)
(uri (string-append "https://ftp.postgresql.org/pub/source/v"
version "/postgresql-" version ".tar.bz2"))
(sha256
(base32
- "04yffrrmn85k25n3nq389aa9c1j8mkimrf889kayl772h9nv2fib"))))
+ "1lbzwpmdxmk5bh0ix0rn72qbd52dq5cb55nzajscb0bvwa95abvi"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("--with-uuid=e2fs")
pictures, sounds, or video.")
(license (license:x11-style "file://COPYRIGHT"))))
+(define-public postgresql-9.6
+ (package
+ (inherit postgresql)
+ (name "postgresql")
+ (version "9.6.5")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://ftp.postgresql.org/pub/source/v"
+ version "/postgresql-" version ".tar.bz2"))
+ (sha256
+ (base32
+ "0k3ls2x182jz6djjiqj9kycddabdl2gk1y1ajq1vipnxwfki5nh6"))))))
+
(define-public qdbm
(package
(name "qdbm")
(define-public tdb
(package
(name "tdb")
- (version "1.3.14")
+ (version "1.3.15")
(source (origin
(method url-fetch)
(uri (string-append "https://www.samba.org/ftp/tdb/tdb-"
version ".tar.gz"))
(sha256
(base32
- "1sfbia8xyaywgx9zy7x618vrvyx9gc3cgqf763shsii9javlnz9s"))))
+ "0a37jhpij8wr4f4pjqdlwnffy2l6a2vkqdpz1bqxj6v06cwbz8dl"))))
(build-system gnu-build-system)
(arguments
'(#:phases
(define-public python-peewee
(package
(name "python-peewee")
- (version "2.8.3")
+ (version "2.10.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "peewee" version))
(sha256
(base32
- "1605bk11s7aap2q4qyba93rx7yfh8b11kk0cqi08z8klx2iar8yd"))))
+ "10f2mrd5hw6rjklrzaix2lsxlgc8vx3xak54arcy6yd791zhchi3"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; Fails to import test data
(arguments
`(#:phases
(modify-phases %standard-phases
- (add-before 'configure 'autoreconf
+ (add-after 'unpack 'autoreconf
(lambda _
(zero? (system* "autoreconf" "-vfi")))))))
(home-page "http://mdbtools.sourceforge.net/")
(define-public python-lmdb
(package
(name "python-lmdb")
- (version "0.92")
+ (version "0.93")
(source (origin
(method url-fetch)
(uri (pypi-uri "lmdb" version))
(sha256
(base32
- "01nw6r08jkipx6v92kw49z34wmwikrpvc5j9xawdiyg1n2526wrx"))
+ "0xdpb298fyl68acadbwv5801wcwfpnhc7sm4bnrq1x4bd5dhhsql"))
(modules '((guix build utils)))
(snippet
;; Delete bundled lmdb source files.
(define-public python2-lmdb
(package-with-python2 python-lmdb))
+
+(define-public python-orator
+ (package
+ (name "python-orator")
+ (version "0.9.7")
+ (source (origin
+ (method url-fetch)
+ (uri (pypi-uri "orator" version))
+ (sha256
+ (base32
+ "14r58z64fdp76ixnvmi4lni762b405ynmsx6chr1qihs3yl9zn6c"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'loosen-dependencies
+ ;; Tests are not actually run since they are not included with the
+ ;; distributed package, but dependencies are checked.
+ (lambda _
+ (substitute* "setup.py"
+ ((",<.*'") "'")
+ (("flexmock==0.9.7") "flexmock")
+ ;; The pytest-mock package is out of date, so we remove minimum
+ ;; version requirement.
+ (("pytest-mock.*'") "pytest-mock'"))
+ #t)))))
+ (native-inputs
+ `(("python-pytest-mock" ,python-pytest-mock)
+ ("python-pytest" ,python-pytest-3.0)
+ ("python-flexmock" ,python-flexmock)))
+ (propagated-inputs
+ `(("python-backpack" ,python-backpack)
+ ("python-blinker" ,python-blinker)
+ ("python-cleo" ,python-cleo)
+ ("python-faker" ,python-faker)
+ ("python-inflection" ,python-inflection)
+ ("python-lazy-object-proxy" ,python-lazy-object-proxy)
+ ("python-pendulum" ,python-pendulum)
+ ("python-pyaml" ,python-pyaml)
+ ("python-pygments" ,python-pygments)
+ ("python-simplejson" ,python-simplejson)
+ ("python-six" ,python-six)
+ ("python-wrapt" ,python-wrapt)))
+ (home-page "https://orator-orm.com/")
+ (synopsis "ActiveRecord ORM for Python")
+ (description
+ "Orator provides a simple ActiveRecord-like Object Relational Mapping
+implementation for Python.")
+ (license license:expat)
+ (properties `((python2-variant . ,(delay python2-orator))))))
+
+(define-public python2-orator
+ (package-with-python2 (strip-python2-variant python-orator)))
+
+(define-public virtuoso-ose
+ (package
+ (name "virtuoso-ose")
+ (version "7.2.4.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append
+ "https://github.com/openlink/virtuoso-opensource/releases/"
+ "download/v" version "/virtuoso-opensource-" version ".tar.gz"))
+ (sha256
+ (base32 "12dqam1gc1v93l0bj0vlpvjqppki6y1hqrlznywxnw0rrz9pb002"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:tests? #f)) ; Tests require a network connection.
+ (inputs
+ `(("openssl" ,openssl)
+ ("net-tools" ,net-tools)))
+ (home-page "http://vos.openlinksw.com/owiki/wiki/VOS/")
+ (synopsis "Multi-model database system")
+ (description "Virtuoso is a scalable cross-platform server that combines
+relational, graph, and document data management with web application server
+and web services platform functionality.")
+ ;; configure: error: ... can only be build on 64bit platforms
+ (supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))
+ (license license:gpl2)))
HCoop / jackhill / guix / guix.git / blobdiff